Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capra_20aegagrus_20[genbank_20GCA_5F000978405.1_202015-04-24] 89,498 sequences; 2,828,873,048 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq17 140 3e-28 seq18 118 1e-21 seq26 102 7e-17 seq19 98.7 9e-16 seq3 96.9 3e-15 seq11 95.1 1e-14 seq542 91.5 1e-13 >seq17 Length=72096382 Score = 140 bits (154), Expect = 3e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || |||||||||||| | || || || || |||||||| || || || || || || || Sbjct 46150558 ACAATGCAGATCTTTGTAAAGACCCTCACTGGTAAAACCATCACTCTGGAGGTGGAGCCC 46150617 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | ||||| | || | || || ||||||||||| |||||||| || || || || Sbjct 46150618 AGTGACACCATCGAGAATGTCAAGGTGAAGATCCAAGAAAAAGAAGGCATCCCCCCAGAC 46150677 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || || | |||||||||||||||||||||||||||||| | | | | |||| || || Sbjct 46150678 CAGCAGAGGTTGATCTTTGCCGGGAAACAGCTGGAGGATGGGCGCACCCTGTCTGACTAC 46150737 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGT 24912 ||||| || ||||| || || || ||| |||| Sbjct 46150738 AACATCCAGAAGGAGTCCACTCTGCACCTGGT 46150769 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || | || || || || || || || || || || ||| Sbjct 46152384 GATGCAGATCTTCGTGAAGACCTTGACGGGCAAGACCATCACCCTGGAGGTGGAGCCCAG 46152443 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || ||||||||||||||||| || || || || || || Sbjct 46152444 TGACACCATCGAGAACGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGACCA 46152503 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | ||||||||||||||||||||||||| ||| | | | | |||| || || || Sbjct 46152504 GCAGAGGCTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAA 46152563 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| || ||||| || || || ||| |||| |||| ||| | ||||| Sbjct 46152564 CATCCAGAAGGAGTCCACCCTGCACCTGGTCCTGCGCTTGAGGGGAGG 46152611 Score = 122 bits (134), Expect = 8e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || | || || || || || || || || || || ||| Sbjct 46151016 GATGCAGATCTTCGTGAAGACCTTGACGGGCAAGACCATCACCCTGGAGGTGGAGCCCAG 46151075 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || ||||||||||| |||||||| || || || || || Sbjct 46151076 TGACACCATCGAGAATGTCAAGGCGAAGATCCAAGAAAAAGAAGGCATCCCCCCAGACCA 46151135 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | |||||||||||||||||||||||||||||| | | | | |||| || || || Sbjct 46151136 GCAGAGGTTGATCTTTGCCGGGAAACAGCTGGAGGATGGGCGCACCCTGTCTGACTACAA 46151195 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912 ||| || ||||| || || || ||| |||| Sbjct 46151196 CATCCAGAAGGAGTCCACTCTGCACCTGGT 46151225 Score = 122 bits (134), Expect = 8e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || | || || || || || || || || || || ||| Sbjct 46151244 GATGCAGATCTTCGTGAAGACCTTGACGGGCAAGACCATCACCCTGGAGGTGGAGCCCAG 46151303 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || ||||||||||| |||||||| || || || || || Sbjct 46151304 TGACACCATCGAGAATGTCAAGGCGAAGATCCAAGAAAAAGAAGGCATCCCCCCAGACCA 46151363 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | |||||||||||||||||||||||||||||| | | | | |||| || || || Sbjct 46151364 GCAGAGGTTGATCTTTGCCGGGAAACAGCTGGAGGATGGGCGCACCCTGTCTGACTACAA 46151423 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912 ||| || ||||| || || || ||| |||| Sbjct 46151424 CATCCAGAAGGAGTCCACTCTGCACCTGGT 46151453 Score = 118 bits (130), Expect = 1e-21 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || | || || || || || || || || || || ||| Sbjct 46151472 GATGCAGATCTTCGTGAAGACCTTGACGGGCAAGACCATCACCCTGGAGGTGGAGCCCAG 46151531 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || ||||||||||| |||||||| || || || || || Sbjct 46151532 TGACACCATCGAGAATGTCAAGGCGAAGATCCAAGAAAAAGAAGGCATCCCCCCAGACCA 46151591 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | ||||||||||||||||||||||||||||| | | | | |||| || || || Sbjct 46151592 GCAGAGGCTGATCTTTGCCGGGAAACAGCTGGAGGATGGGCGCACCCTGTCTGACTACAA 46151651 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912 ||| || ||||| || || || ||| |||| Sbjct 46151652 CATCCAGAAGGAGTCCACTCTGCACCTGGT 46151681 Score = 118 bits (130), Expect = 1e-21 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || | || || || || || || || || || || ||| Sbjct 46151700 GATGCAGATCTTCGTGAAGACCTTGACGGGCAAGACCATCACCCTGGAGGTGGAGCCCAG 46151759 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || ||||||||||||||||| || || || || || || Sbjct 46151760 TGACACCATCGAGAACGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGACCA 46151819 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | ||||||||||||||||||||||||||||| | | | | |||| || || || Sbjct 46151820 GCAGAGGCTGATCTTTGCCGGGAAACAGCTGGAGGATGGGCGCACCCTGTCTGACTACAA 46151879 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912 ||| || ||||| || || || ||| |||| Sbjct 46151880 CATCCAGAAGGAGTCCACTCTGCACCTGGT 46151909 Score = 118 bits (130), Expect = 1e-21 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || | || || || || || || || || || || ||| Sbjct 46151928 GATGCAGATCTTCGTGAAGACCTTGACGGGCAAGACCATCACCCTGGAGGTGGAGCCCAG 46151987 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || ||||||||||||||||| || || || || || || Sbjct 46151988 TGACACCATCGAGAACGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGACCA 46152047 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | ||||||||||||||||||||||||||||| | | | | |||| || || || Sbjct 46152048 GCAGAGGCTGATCTTTGCCGGGAAACAGCTGGAGGATGGGCGCACCCTGTCTGACTACAA 46152107 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912 ||| || ||||| || || || ||| |||| Sbjct 46152108 CATCCAGAAGGAGTCCACTCTGCACCTGGT 46152137 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || | || || || || || || || || || || ||| Sbjct 46150788 GATGCAGATCTTCGTGAAGACCTTGACGGGCAAGACCATCACCCTGGAGGTGGAGCCCAG 46150847 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || ||||||||||||||||| || || || || || || Sbjct 46150848 TGACACCATCGAGAACGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGACCA 46150907 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | ||||||||||||||||||||||||| ||| | | | | |||| || || || Sbjct 46150908 GCAGAGGCTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAA 46150967 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912 ||| || ||||| || || || ||| |||| Sbjct 46150968 CATCCAGAAGGAGTCCACTCTGCACCTGGT 46150997 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || | || || || || || || || || || || ||| Sbjct 46152156 GATGCAGATCTTCGTGAAGACCTTGACGGGCAAGACCATCACCCTGGAGGTGGAGCCCAG 46152215 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || ||||||||||||||||| || || || || || || Sbjct 46152216 TGACACCATCGAGAACGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGACCA 46152275 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | ||||||||||||||||||||||||| ||| | | | | |||| || || || Sbjct 46152276 GCAGAGGCTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAA 46152335 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912 ||| || ||||| || || || ||| |||| Sbjct 46152336 CATCCAGAAGGAGTCCACTCTGCACCTGGT 46152365 >seq18 Length=67558079 Score = 118 bits (130), Expect = 1e-21 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || | || || || || || || || || || || ||| Sbjct 3834017 GATGCAGATCTTCGTGAAGACCTTGACGGGCAAGACCATCACCCTGGAGGTGGAGCCCAG 3834076 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || ||||||||||||||||| || || || || || || Sbjct 3834077 TGACACCATCGAGAACGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGACCA 3834136 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | ||||||||||||||||||||||||||||| | | | | |||| || || || Sbjct 3834137 GCAGAGGCTGATCTTTGCCGGGAAACAGCTGGAGGATGGGCGCACCCTGTCTGACTACAA 3834196 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912 ||| || ||||| || || || ||| |||| Sbjct 3834197 CATCCAGAAGGAGTCCACTCTGCACCTGGT 3834226 Score = 118 bits (130), Expect = 1e-21 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || | || || || || || || || || || || ||| Sbjct 3834245 GATGCAGATCTTCGTGAAGACCTTGACGGGCAAGACCATCACCCTGGAGGTGGAGCCCAG 3834304 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || ||||||||||||||||| || || || || || || Sbjct 3834305 TGACACCATCGAGAACGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGACCA 3834364 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | ||||||||||||||||||||||||||||| | | | | |||| || || || Sbjct 3834365 GCAGAGGCTGATCTTTGCCGGGAAACAGCTGGAGGATGGGCGCACCCTGTCTGACTACAA 3834424 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912 ||| || ||||| || || || ||| |||| Sbjct 3834425 CATCCAGAAGGAGTCCACTCTGCACCTGGT 3834454 Score = 118 bits (130), Expect = 1e-21 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || | || || || || || || || || || || ||| Sbjct 3834473 GATGCAGATCTTCGTGAAGACCTTGACGGGCAAGACCATCACCCTGGAGGTGGAGCCCAG 3834532 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || ||||||||||||||||| || || || || || || Sbjct 3834533 TGACACCATCGAGAACGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGACCA 3834592 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | ||||||||||||||||||||||||||||| | | | | |||| || || || Sbjct 3834593 GCAGAGGCTGATCTTTGCCGGGAAACAGCTGGAGGATGGGCGCACCCTGTCTGACTACAA 3834652 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912 ||| || ||||| || || || ||| |||| Sbjct 3834653 CATCCAGAAGGAGTCCACTCTGCACCTGGT 3834682 Score = 118 bits (130), Expect = 1e-21 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || | || || || || || || || || || || ||| Sbjct 3834701 GATGCAGATCTTCGTGAAGACCTTGACGGGCAAGACCATCACCCTGGAGGTGGAGCCCAG 3834760 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || ||||||||||||||||| || || || || || || Sbjct 3834761 TGACACCATCGAGAACGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGACCA 3834820 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | ||||||||||||||||||||||||||||| | | | | |||| || || || Sbjct 3834821 GCAGAGGCTGATCTTTGCCGGGAAACAGCTGGAGGATGGGCGCACCCTGTCTGACTACAA 3834880 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912 ||| || ||||| || || || ||| |||| Sbjct 3834881 CATCCAGAAGGAGTCCACTCTGCACCTGGT 3834910 Score = 118 bits (130), Expect = 1e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| || | || || |||| || || || || || || || || || || | Sbjct 35524511 GATGCAGATTTTCGTGAAGACCCTAAGGGGGAAGACCATCACTCTTGAGGTCGAGCCCTC 35524452 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || ||| |||||| ||||| |||||||| || || |||||||| ||||| || || Sbjct 35524451 GGATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGACCA 35524392 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| | |||||||||| || || || ||||| ||| | | |||| || || || Sbjct 35524391 GCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAA 35524332 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCG 24932 |||||||||||| || || || || | |||||| || | || || |||| Sbjct 35524331 CATTCAAAAGGAGTCCACTCTTCATCTAGTGTTGAGACTTCGTGGTGGCG 35524282 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || | || || || || || || || || || || ||| Sbjct 3834929 GATGCAGATCTTCGTGAAGACCTTGACGGGCAAGACCATCACCCTGGAGGTGGAGCCCAG 3834988 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || ||||||||||||||||| || || || || || || Sbjct 3834989 TGACACCATCGAGAACGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGACCA 3835048 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | ||||||||||||||||||||||||| ||| | | | | |||| || || || Sbjct 3835049 GCAGAGGCTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAA 3835108 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912 ||| || ||||| || || || ||| |||| Sbjct 3835109 CATCCAGAAGGAGTCCACTCTGCACCTGGT 3835138 Score = 98.7 bits (108), Expect = 9e-16 Identities = 95/122 (78%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 24791 ATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAG 24850 |||||||||||||| || || || || || || || | |||||||||||||||||||| Sbjct 3833877 ATCCAAGACAAAGAGGGCATCCCCCCAGACCAGCAGAGGCTGATCTTTGCCGGGAAACAG 3833936 Query 24851 CTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTG 24910 ||||||||| | | | | |||| || || ||||| || ||||| || || || ||| || Sbjct 3833937 CTGGAGGATGGGCGCACCCTGTCTGACTACAACATCCAGAAGGAGTCCACTCTGCACCTG 3833996 Query 24911 GT 24912 || Sbjct 3833997 GT 3833998 Score = 86.0 bits (94), Expect = 6e-12 Identities = 157/228 (69%), Gaps = 3/228 (1%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | | || | |||| ||| || || | || || || || ||| Sbjct 3835157 GATGCAGATCTTCGTGATGACCTTGACCG-TAAGACCATCCCCCTGGAGGTGGAGCCCAG 3835215 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||| | | || | || || ||||||||||||||| | || || || | || || Sbjct 3835216 TGACCCCATCGAGAATGTCAAGGCCAAGATCCAAGACAAAAAGGGCATCCCCCTAGACCA 3835275 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | |||||||||| |||||||||||||| ||| | | | |||| || || || Sbjct 3835276 GCAGAGGCTGATCTTTGCAGGGAAACAGCTGGAAGATGGGCACACCCTGTCTGAATACAA 3835335 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| || | || || || || |||||||| |||| ||| | ||||| Sbjct 3835336 CATCCAGA--GAGTCCACTCTGCACTTGGTCCTGCGCTTGAGGGGAGG 3835381 >seq26 Length=53792517 Score = 102 bits (112), Expect = 7e-17 Identities = 158/226 (70%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 24705 TGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCG 24764 ||||||| || || || || || || || || || | || || || || || || | | Sbjct 43958122 TGCAGATTTTCATGAAGACCCTGACAGGGAAGACCACCACTCTTGAGGTCGAGCCCTCGG 43958181 Query 24765 ACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAAC 24824 | ||| ||||| ||||| |||||||| || || |||||||| ||||| || || | Sbjct 43958182 ATACAACAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGACCAGC 43958241 Query 24825 AACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACA 24884 || | ||||||||| || || || ||||| ||| | | |||| || || |||| Sbjct 43958242 AAAGACTGATCTTTGTTGGCAAGCAACTGGAAGATGGATGTACTTTGTCTGACTACAACA 43958301 Query 24885 TTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||||||| || || || || | |||||| || | || || || Sbjct 43958302 TTCAAAAGGAGTCCACTCTTCATCTAGTGTTGAGACTTCGTGGTGG 43958347 >seq19 Length=68041221 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || ||||| || || || || || || ||||| ||| Sbjct 35860123 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTAGAGCCCAGT 35860064 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| || || ||||| || || || || || Sbjct 35860063 GACACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAGGAAGGCATTCCCCCTGACCAG 35860004 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | ||||||||||| || |||||||| ||| | | | || ||||| ||| Sbjct 35860003 CAGAGGCTCATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 35859944 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || ||||| ||||| || ||| |||| Sbjct 35859943 ATCCAGAAGGAGTCGACCCTGCACCTGGT 35859915 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || || ||||| || || || || || || || || ||| Sbjct 35860351 ATGCAAATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 35860292 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| || || ||||| || || || || || Sbjct 35860291 GACACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAGGAAGGCATTCCCCCTGACCAG 35860232 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | ||||||||||| || |||||||| ||| | | | || ||||| ||| Sbjct 35860231 CAGAGGCTCATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 35860172 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || ||||| ||||| || ||| |||| Sbjct 35860171 ATCCAGAAGGAGTCGACCCTGCACCTGGT 35860143 >seq3 Length=114358107 Score = 96.9 bits (106), Expect = 3e-15 Identities = 155/219 (71%), Gaps = 3/219 (1%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGC-TAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCA 24761 ||||||||| ||| | || || | | || || || || || || ||| | || || || Sbjct 18938778 GATGCAGATTTTTGTGAAGACTCCTGACAGGGAAGACCATCACTCTCAAGGTCGAGCCCT 18938837 Query 24762 CCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 | || ||| ||||| |||| |||||||| || || |||||||| ||||| || | Sbjct 18938838 CGGATACAATAGAAGATGTAATGGTCAAGATCCAGGATAAGGAAGGAATTCCTCCTGACC 18938897 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACAT-GTCAGATTAT 24880 | ||| | ||||||||| || || || |||| ||| || | | | ||| || || Sbjct 18938898 AGCAAAGACTGATCTTTGTTGGCAAGCAAGTGGAAGATG-GACATGCTTTGTCTGACTAC 18938956 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGA 24919 |||||||||||||| || || || || || |||||| || Sbjct 18938957 AACATTCAAAAGGAGTCCACTCTTCATTTAGTGTTGAGA 18938995 >seq11 Length=102031526 Score = 95.1 bits (104), Expect = 1e-14 Identities = 115/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| || || || || || || | || | || || | |||||| || || | Sbjct 16973414 GATGCAGATTTTCATGAAGACCCTGACAAGGAAGTCCATCACTCCCGAAGTCAAACCCTC 16973473 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || |||||| ||||| ||||||||||| ||| ||||||| ||||||||||| Sbjct 16973474 AGATGCAATAGAAAATGTAAAGGCCAAGATCCAAGATAAAAAAGGAATTCCTCCCGATCA 16973533 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT 24859 ||| | |||||||||| || || || |||| ||| Sbjct 16973534 GCAAAGACTGATCTTTGCTGGCAAGCAATTGGAAGAT 16973570 >seq542 Length=2881201 Score = 91.5 bits (100), Expect = 1e-13 Identities = 165/240 (69%), Gaps = 1/240 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| | || || || | || || || ||||| || || || || ||| Sbjct 36128 GATGCAGATCTTTGTGAAGACCCTGATGGGCAAGACCATTACCCTTGAGGTTGAGCCCAG 36069 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || ||| || ||||||||| | || || || || || || || Sbjct 36068 TGACACCATCGAGAGTGTCAAAGCCAA-ATCCAAGACGAGGAGGGCATTCCACCAGACCA 36010 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| ||||||| |||| ||| ||||||||||| | | ||||||| || || Sbjct 36009 GCAGCGTCTGATCTTCTCCGGCAAAGAGCTGGAGGATGGCCGCACTCTGTCAGACTACAA 35950 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAACTGAGCC 24942 || || || || || || || ||| ||| | | | |||| || ||| | |||||| Sbjct 35949 TATCCAGAAAGAGTCCACCCTGCACCTGGCGCTTCATCTGCGAGGCGGCATCATTGAGCC 35890 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449394288307440