Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capra_20aegagrus_20[genbank_20GCA_5F000978405.1_202015-04-24] 89,498 sequences; 2,828,873,048 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq14 89.7 1e-12 >seq14 Length=93702490 Score = 89.7 bits (98), Expect = 1e-12 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 131864 GTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATCTTTTGG 131923 || || |||||| ||| ||||| || ||||| ||||| |||| |||||| || ||| Sbjct 71995043 GTGGCCTTTGCTGCTGTAGAAGGAATTTTCTTCTCAGGATCTTTTGCTGCTATATTCTGG 71995102 Query 131924 CTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCGAGAGAT 131983 || ||||| | ||| | |||||||||||| | || |||||| | ||||| |||||| Sbjct 71995103 CTAAAGAAAAGAGGACTCATGCCTGGACTCACTTTTTCCAATGAGCTCATCAGCAGAGAT 71995162 Query 131984 GAAG 131987 |||| Sbjct 71995163 GAAG 71995166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1185451889921578