Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capra_20aegagrus_20[genbank_20GCA_5F000978405.1_202015-04-24] 89,498 sequences; 2,828,873,048 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq9 98.7 1e-15 >seq9 Length=91317560 Score = 98.7 bits (108), Expect = 1e-15 Identities = 117/159 (74%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 32674 TGTGGTTATATTTTATCTCTAAAGGTATAGAATATCTAGATACTATTTTCTTCATAATGA 32733 |||||| || ||||| |||||||| || || ||| | || || | || || || ||| Sbjct 7013694 TGTGGTGGTACTTTATATCTAAAGGAATTGAGTATTTGGACACGGTGTTTTTTATCCTGA 7013635 Query 32734 GAAAGAAATTTAACCAAGTTAGCTTTTTGCACGTATACCACCATTTTACCATGTTTACTT 32793 | |||||| |||||||| || | ||||| || || || | ||||||||| || | Sbjct 7013634 GGAAGAAAAACAACCAAGTCTCTTTCCTCCACGTGTATCATCACTGTACCATGTTCACGT 7013575 Query 32794 TAGGATGGATAGGGATTAAATGGTTTGCAGGAGGACAGG 32832 | | ||||| || ||||| ||| ||||||||||||||| Sbjct 7013574 TGTGGTGGATTGGAATTAAGTGGGTTGCAGGAGGACAGG 7013536 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 602506006559520