Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capra_20aegagrus_20[genbank_20GCA_5F000978405.1_202015-04-24] 89,498 sequences; 2,828,873,048 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq17 149 1e-30 seq18 140 7e-28 seq19 123 6e-23 seq26 104 5e-17 seq7683 87.8 4e-12 seq11 84.2 5e-11 >seq17 Length=72096382 Score = 149 bits (164), Expect = 1e-30 Identities = 168/224 (75%), Gaps = 6/224 (3%) Strand=Plus/Minus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 ||||| | |||||| || || ||||| ||||| || ||||||||||| || | | || Sbjct 46151693 CTGAGGCGGAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTG 46151634 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | |||||| || || ||||||||| ||||| |||||||||||||| | | ||| ||| Sbjct 46151633 CGCCCATCCTCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCT 46151574 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCA 152060 || |||||||| || || |||||| |||| | | |||| ||| ||| || || Sbjct 46151573 TCTTTTTCTTGGATCTTCGCCTTGACATTCTCGATGGTGTC---ACTGGGCTCCACCTCC 46151517 Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || |||||||| | ||||||||||||| |||||| Sbjct 46151516 AGGGTGATGGTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 46151473 Score = 145 bits (160), Expect = 2e-29 Identities = 168/225 (75%), Gaps = 6/225 (3%) Strand=Plus/Minus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 ||||| | |||||| || || ||||| ||||| || ||||||||||| || | | || Sbjct 46150781 CTGAGGCGGAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTG 46150722 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | |||||| || || ||||||||| ||||| | |||||||||||| | | ||| ||| Sbjct 46150721 CGCCCATCCTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCT 46150662 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCA 152060 || |||||||| || || |||||| |||| | | |||| ||| ||| || || Sbjct 46150661 TCTTTTTCTTGGATCTTCACCTTGACATTCTCGATGGTGTC---ACTGGGCTCCACCTCC 46150605 Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 ||||| || ||||| || ||||| ||||| || |||| ||||||| Sbjct 46150604 AGAGTGATGGTTTTACCAGTGAGGGTCTTTACAAAGATCTGCATT 46150560 Score = 143 bits (158), Expect = 6e-29 Identities = 167/224 (75%), Gaps = 6/224 (3%) Strand=Plus/Minus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 ||||| | |||||| || || ||||| ||||| || ||||||||||| || | | || Sbjct 46151237 CTGAGGCGGAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTG 46151178 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | |||||| || || ||||||||| ||||| | |||||||||||| | | ||| ||| Sbjct 46151177 CGCCCATCCTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCT 46151118 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCA 152060 || |||||||| || || |||||| |||| | | |||| ||| ||| || || Sbjct 46151117 TCTTTTTCTTGGATCTTCGCCTTGACATTCTCGATGGTGTC---ACTGGGCTCCACCTCC 46151061 Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || |||||||| | ||||||||||||| |||||| Sbjct 46151060 AGGGTGATGGTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 46151017 Score = 143 bits (158), Expect = 6e-29 Identities = 167/224 (75%), Gaps = 6/224 (3%) Strand=Plus/Minus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 ||||| | |||||| || || ||||| ||||| || ||||||||||| || | | || Sbjct 46151465 CTGAGGCGGAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTG 46151406 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | |||||| || || ||||||||| ||||| | |||||||||||| | | ||| ||| Sbjct 46151405 CGCCCATCCTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCT 46151346 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCA 152060 || |||||||| || || |||||| |||| | | |||| ||| ||| || || Sbjct 46151345 TCTTTTTCTTGGATCTTCGCCTTGACATTCTCGATGGTGTC---ACTGGGCTCCACCTCC 46151289 Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || |||||||| | ||||||||||||| |||||| Sbjct 46151288 AGGGTGATGGTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 46151245 Score = 140 bits (154), Expect = 7e-28 Identities = 166/224 (74%), Gaps = 6/224 (3%) Strand=Plus/Minus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 ||||| | |||||| || || ||||| ||||| || ||||||||||| || | | || Sbjct 46151009 CTGAGGCGGAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTG 46150950 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | ||||||||| || ||||||||| ||||| |||||||||||||| | | ||| || Sbjct 46150949 CGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCC 46150890 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCA 152060 || || ||||| || || ||||| |||| | | |||| ||| ||| || || Sbjct 46150889 TCTTTGTCTTGGATCTTGGCCTTGACGTTCTCGATGGTGTC---ACTGGGCTCCACCTCC 46150833 Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || |||||||| | ||||||||||||| |||||| Sbjct 46150832 AGGGTGATGGTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 46150789 Score = 140 bits (154), Expect = 7e-28 Identities = 166/224 (74%), Gaps = 6/224 (3%) Strand=Plus/Minus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 ||||| | |||||| || || ||||| ||||| || ||||||||||| || | | || Sbjct 46152377 CTGAGGCGGAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTG 46152318 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | ||||||||| || ||||||||| ||||| |||||||||||||| | | ||| || Sbjct 46152317 CGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCC 46152258 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCA 152060 || || ||||| || || ||||| |||| | | |||| ||| ||| || || Sbjct 46152257 TCTTTGTCTTGGATCTTGGCCTTGACGTTCTCGATGGTGTC---ACTGGGCTCCACCTCC 46152201 Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || |||||||| | ||||||||||||| |||||| Sbjct 46152200 AGGGTGATGGTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 46152157 Score = 134 bits (148), Expect = 3e-26 Identities = 165/224 (74%), Gaps = 6/224 (3%) Strand=Plus/Minus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 ||||| | |||||| || || ||||| ||||| || ||||||||||| || | | || Sbjct 46151921 CTGAGGCGGAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTG 46151862 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | |||||| || || ||||||||| ||||| |||||||||||||| | | ||| || Sbjct 46151861 CGCCCATCCTCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCC 46151802 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCA 152060 || || ||||| || || ||||| |||| | | |||| ||| ||| || || Sbjct 46151801 TCTTTGTCTTGGATCTTGGCCTTGACGTTCTCGATGGTGTC---ACTGGGCTCCACCTCC 46151745 Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || |||||||| | ||||||||||||| |||||| Sbjct 46151744 AGGGTGATGGTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 46151701 Score = 134 bits (148), Expect = 3e-26 Identities = 165/224 (74%), Gaps = 6/224 (3%) Strand=Plus/Minus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 ||||| | |||||| || || ||||| ||||| || ||||||||||| || | | || Sbjct 46152149 CTGAGGCGGAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTG 46152090 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | |||||| || || ||||||||| ||||| |||||||||||||| | | ||| || Sbjct 46152089 CGCCCATCCTCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCC 46152030 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCA 152060 || || ||||| || || ||||| |||| | | |||| ||| ||| || || Sbjct 46152029 TCTTTGTCTTGGATCTTGGCCTTGACGTTCTCGATGGTGTC---ACTGGGCTCCACCTCC 46151973 Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || |||||||| | ||||||||||||| |||||| Sbjct 46151972 AGGGTGATGGTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 46151929 Score = 127 bits (140), Expect = 5e-24 Identities = 158/215 (73%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| || || || || ||||| || ||||||||||| || | | || | ||||||| Sbjct 46152596 AGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 46152537 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||||||||| ||||| |||||||||||||| | | ||| || || || ||| Sbjct 46152536 TCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCT 46152477 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || || || ||||| |||| | | |||| ||| ||| || || || || || Sbjct 46152476 TGGATCTTGGCCTTGACGTTCTCGATGGTGTC---ACTGGGCTCCACCTCCAGGGTGATG 46152420 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || |||||||| | ||||||||||||| |||||| Sbjct 46152419 GTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 46152385 >seq18 Length=67558079 Score = 140 bits (154), Expect = 7e-28 Identities = 166/224 (74%), Gaps = 6/224 (3%) Strand=Plus/Minus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 ||||| | |||||| || || ||||| ||||| || ||||||||||| || | | || Sbjct 3835150 CTGAGGCGGAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTG 3835091 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | ||||||||| || ||||||||| ||||| |||||||||||||| | | ||| || Sbjct 3835090 CGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCC 3835031 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCA 152060 || || ||||| || || ||||| |||| | | |||| ||| ||| || || Sbjct 3835030 TCTTTGTCTTGGATCTTGGCCTTGACGTTCTCGATGGTGTC---ACTGGGCTCCACCTCC 3834974 Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || |||||||| | ||||||||||||| |||||| Sbjct 3834973 AGGGTGATGGTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 3834930 Score = 134 bits (148), Expect = 3e-26 Identities = 165/224 (74%), Gaps = 6/224 (3%) Strand=Plus/Minus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 ||||| | |||||| || || ||||| ||||| || ||||||||||| || | | || Sbjct 3834238 CTGAGGCGGAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTG 3834179 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | |||||| || || ||||||||| ||||| |||||||||||||| | | ||| || Sbjct 3834178 CGCCCATCCTCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCC 3834119 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCA 152060 || || ||||| || || ||||| |||| | | |||| ||| ||| || || Sbjct 3834118 TCTTTGTCTTGGATCTTGGCCTTGACGTTCTCGATGGTGTC---ACTGGGCTCCACCTCC 3834062 Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || |||||||| | ||||||||||||| |||||| Sbjct 3834061 AGGGTGATGGTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 3834018 Score = 134 bits (148), Expect = 3e-26 Identities = 165/224 (74%), Gaps = 6/224 (3%) Strand=Plus/Minus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 ||||| | |||||| || || ||||| ||||| || ||||||||||| || | | || Sbjct 3834466 CTGAGGCGGAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTG 3834407 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | |||||| || || ||||||||| ||||| |||||||||||||| | | ||| || Sbjct 3834406 CGCCCATCCTCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCC 3834347 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCA 152060 || || ||||| || || ||||| |||| | | |||| ||| ||| || || Sbjct 3834346 TCTTTGTCTTGGATCTTGGCCTTGACGTTCTCGATGGTGTC---ACTGGGCTCCACCTCC 3834290 Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || |||||||| | ||||||||||||| |||||| Sbjct 3834289 AGGGTGATGGTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 3834246 Score = 134 bits (148), Expect = 3e-26 Identities = 165/224 (74%), Gaps = 6/224 (3%) Strand=Plus/Minus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 ||||| | |||||| || || ||||| ||||| || ||||||||||| || | | || Sbjct 3834694 CTGAGGCGGAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTG 3834635 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | |||||| || || ||||||||| ||||| |||||||||||||| | | ||| || Sbjct 3834634 CGCCCATCCTCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCC 3834575 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCA 152060 || || ||||| || || ||||| |||| | | |||| ||| ||| || || Sbjct 3834574 TCTTTGTCTTGGATCTTGGCCTTGACGTTCTCGATGGTGTC---ACTGGGCTCCACCTCC 3834518 Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || |||||||| | ||||||||||||| |||||| Sbjct 3834517 AGGGTGATGGTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 3834474 Score = 134 bits (148), Expect = 3e-26 Identities = 165/224 (74%), Gaps = 6/224 (3%) Strand=Plus/Minus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 ||||| | |||||| || || ||||| ||||| || ||||||||||| || | | || Sbjct 3834922 CTGAGGCGGAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTG 3834863 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | |||||| || || ||||||||| ||||| |||||||||||||| | | ||| || Sbjct 3834862 CGCCCATCCTCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCC 3834803 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCA 152060 || || ||||| || || ||||| |||| | | |||| ||| ||| || || Sbjct 3834802 TCTTTGTCTTGGATCTTGGCCTTGACGTTCTCGATGGTGTC---ACTGGGCTCCACCTCC 3834746 Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || |||||||| | ||||||||||||| |||||| Sbjct 3834745 AGGGTGATGGTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 3834702 Score = 123 bits (136), Expect = 6e-23 Identities = 160/221 (72%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 ||||| | || ||||||||||| ||||| ||||| |||||||| || | ||||| | Sbjct 35524293 AGTCTCAACACTAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGT 35524352 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 |||||||| || || || || ||||| || || |||||||| | | ||||||||| Sbjct 35524353 CCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCC 35524412 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || || || || || || ||| | |||| | || || ||| || |||||||| Sbjct 35524413 TTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGCTCGACCTCAAGAGTG 35524472 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || || ||| | || ||||||||||| | |||||| || Sbjct 35524473 ATGGTCTTCCCCCTTAGGGTCTTCACGAAAATCTGCATCTT 35524513 Score = 98.7 bits (108), Expect = 2e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 ||||| | |||||| || || ||||| ||||| || ||||||||||| || | | || Sbjct 3834010 CTGAGGCGGAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTG 3833951 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | |||||| || || ||||||||| ||||| |||||||||||||| | | ||| || Sbjct 3833950 CGCCCATCCTCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCC 3833891 Query 152004 TCCTTTTCTTGAAT 152017 || || ||||| || Sbjct 3833890 TCTTTGTCTTGGAT 3833877 >seq19 Length=68041221 Score = 123 bits (136), Expect = 6e-23 Identities = 157/215 (73%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| || || || || ||||| || |||||||||||||| | | ||| | |||||| Sbjct 35859912 AGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 35859971 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||| ||||| |||||||||||||| | | || |||||||| || Sbjct 35859972 TCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTATCC 35860031 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || || || || || |||| | | |||| ||| |||||| || || || || Sbjct 35860032 TGGATCTTGGCCTTCACGTTCTCGATGGTGTC---ACTGGGCTCTACCTCCAGGGTGATG 35860088 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| || || ||||||||||||| |||||| Sbjct 35860089 GTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 35860123 Score = 123 bits (136), Expect = 6e-23 Identities = 165/228 (72%), Gaps = 6/228 (3%) Strand=Plus/Plus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 ||| || | ||| || || || || || ||||| || |||||||||||||| | | ||| Sbjct 35860130 CCTCAGACGGAGAACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAATCAGAAAGAGT 35860189 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 | |||||||| || || ||||| ||||| |||||||||||||| | | || || Sbjct 35860190 GCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGAATGCC 35860249 Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTC 152059 |||||| || || || || || ||| |||| | | |||| ||| ||| || || Sbjct 35860250 TTCCTTATCCTGGATCTTGGCCTTCACATTCTCGATGGTGTC---ACTGGGCTCCACCTC 35860306 Query 152060 AAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || || || ||||| || || ||||||||||||| |||||||| Sbjct 35860307 CAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATTTGCATTTT 35860354 >seq26 Length=53792517 Score = 104 bits (114), Expect = 5e-17 Identities = 153/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 ||||| | || ||||||||||| ||||| ||||| |||||||| || | ||||| | Sbjct 43958338 AGTCTCAACACTAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACAT 43958279 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 |||||||| || || || | ||||| || || |||||||| | | ||||||||| Sbjct 43958278 CCATCTTCCAGTTGCTTGCCAACAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCC 43958219 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || || || || || || ||| | ||| | || || ||| || |||||||| Sbjct 43958218 TTATCCTGGATCTTGGCCTTTACATTTTCTGTTGTATCCGAGGGCTCGACCTCAAGAGTG 43958159 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCA 152103 | || || || || || ||||||| ||| | ||||| Sbjct 43958158 GTGGTCTTCCCTGTCAGGGTCTTCATGAAAATCTGCA 43958122 >seq7683 Length=5699132 Score = 87.8 bits (96), Expect = 4e-12 Identities = 152/221 (69%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 ||||| | | |||||||||||| ||||| ||||| |||||||| || | ||||| | Sbjct 368184 AGTCTCAACAAAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTAC-- 368127 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 ||||| || || || || ||||| || || |||||||| | | ||||||| Sbjct 368126 --ATCTTTCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAGCTCCTTCC 368069 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || | || | || || ||| | |||| | ||||| || || ||| |||| Sbjct 368068 TTACCCTGGACCTTGACCTTTACATTTTCTATGGGATCTGAGGGCTTGACCTCAGGAGTG 368009 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || || ||| | || ||||||||||| | |||||| || Sbjct 368008 ATGGTCTTCCCCATCAGGGTCTTCACGAAAATCTGCATCTT 367968 >seq11 Length=102031526 Score = 84.2 bits (92), Expect = 5e-11 Identities = 150/218 (69%), Gaps = 1/218 (0%) Strand=Plus/Plus Query 151888 GTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCC 151947 |||| || |||||||||||||| ||||| ||||| |||||||| | || |||| | | Sbjct 42483378 GTCTCAGCACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTTGGTCAAAG-ACATC 42483436 Query 151948 CATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCT 152007 ||||||| || ||| || || | ||| || || |||||||| | | | ||||||| Sbjct 42483437 CATCTTCCAGTTGTTTGCCAGCAACGATCAGTCTTTGCTGGTCAGGAGGAACACCTTCCT 42483496 Query 152008 TTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAA 152067 | || || || || || ||| | |||| | || | || || | |||| | Sbjct 42483497 TATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCAAGGGCTTGACCTTGAGAGAGA 42483556 Query 152068 TAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 | | || || || | ||||||||||| | ||||||| Sbjct 42483557 TGCTCTTCCCTGTCAAGGTCTTCACGAAAATCTGCATT 42483594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1152497721621158