Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capra_20hircus_20[refseq_20GCF_5F001704415.1_202016-08-24] 29,907 sequences; 2,922,813,246 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq23 178 2e-40 seq7 123 4e-24 seq3 123 4e-24 seq5 120 5e-23 >seq23 Length=48866549 Score = 178 bits (196), Expect = 2e-40 Identities = 198/262 (76%), Gaps = 2/262 (1%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTT-CGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||||||||| ||||| | | |||| || || || ||||| || || || |||||||||| Sbjct 18136475 CGCTAAGCGCCATCGGAAAG-TCTTGCGGGACAATATCCAGGGTATTACTAAGCCAGCTA 18136533 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||| ||||||||||||||||| || ||||| ||| |||| || | |||||||||||| Sbjct 18136534 TCCGACGTCTGGCTCGTCGTGGAGGCGTCAAACGTATCTCCGGTCTTATCTATGAAGAGA 18136593 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 ||||| || |||| | || || | | ||| |||| || || || ||| || | Sbjct 18136594 CTCGTGGGGTGCTGAAAGTGTTTCTGGAAAACGTGATCCGGGACGCGGTCACCTACACAG 18136653 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || || |||||||| ||| | ||||| | ||||| || | |||||||| | Sbjct 18136654 AGCACGCCAAGCGCAAGACTGTTACCGCTATGGACGTGGTCTACGCGCTCAAACGTCAGG 18136713 Query 16671 GCCGTAAGATTTATGGTTTTGG 16692 |||||| |||| |||||||| Sbjct 18136714 GCCGTACCCTTTACGGTTTTGG 18136735 Score = 174 bits (192), Expect = 2e-39 Identities = 201/271 (74%), Gaps = 0/271 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 |||||| ||||| |||| |||||| ||||||||||| || ||||||||||| || || Sbjct 18283449 CGCTAAACGTCACCGCAAGGTTCTTCGCGATAACATCCAGGGCATCACCAAGCCCGCCAT 18283390 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 |||||||||||| || ||||| ||||| ||||| | ||||| | ||||||| |||| Sbjct 18283389 CCGTCGTCTGGCCCGGCGTGGAGGAGTTAAGCGCATATCTGGCCTCATCTATGAGGAGAC 18283330 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || |||||| | ||||| | | || || | || || || ||| ||||| Sbjct 18283329 CCGCGGGGTGTTGAAGGTGTTCCTGGAAAATGTGATTCGCGACGCCGTCACCTACACCGA 18283270 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||| || || || || |||||||| |||||||| | ||||| || ||||||| || || Sbjct 18283269 GCATGCCAAGCGCAAAACTGTCACAGCCATGGATGTGGTCTACGCGCTGAAACGCCAGGG 18283210 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCT 16702 ||| | | || || ||||| ||||| || Sbjct 18283209 CCGCACCCTCTACGGCTTTGGCGGTTAAGCT 18283179 Score = 172 bits (190), Expect = 9e-39 Identities = 199/268 (74%), Gaps = 0/268 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 |||||||||||| |||| | | | || || ||||| || || ||||| || ||||| || Sbjct 18260105 CGCTAAGCGTCACCGCAAAGTTTTGCGCGACAACATTCAGGGCATCACAAAACCAGCCAT 18260046 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 || |||||||| || ||||| |||||||||||| |||| || | |||| || |||| Sbjct 18260045 TCGCCGTCTGGCCCGCCGTGGAGGAGTCAAGCGTATCTCCGGCCTCATCTACGAGGAGAC 18259986 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| || ||||| | || || ||| || |||| || ||| || ||| ||||| Sbjct 18259985 CCGTGGAGTGCTGAAGGTGTTTCTGGAGAATGTCATCCGGGACGCTGTCACCTACACCGA 18259926 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || |||||||||||| ||||||| | ||||| || | || ||||| || Sbjct 18259925 GCACGCCAAGCGCAAGACTGTCACCGCCATGGACGTGGTCTACGCGCTCAAGCGTCAGGG 18259866 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 ||| | | ||||| ||||| ||||| Sbjct 18259865 CCGCACTCTCTATGGATTTGGTGGTTAA 18259838 Score = 167 bits (184), Expect = 4e-37 Identities = 197/267 (74%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 |||||||| || |||| |||||| || |||||||| || || |||||||| ||||| Sbjct 18984814 GCTAAGCGCCACCGCAAGGTTCTTCGCGACAACATCCAGGGCATTACCAAGCCCGCTATT 18984755 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 ||||||||||||||||||||||| || ||||| |||| || | |||| || |||| | Sbjct 18984754 CGTCGTCTGGCTCGTCGTGGTGGCGTGAAGCGGATCTCCGGTCTCATCTACGAGGAGACT 18984695 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| || | ||| | ||||| | | || || | || || || || |||||| Sbjct 18984694 CGTGGGGTGCTAAAGGTGTTCCTGGAAAATGTGATTCGGGACGCGGTCACATACACCGAG 18984635 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 || || || || || || |||||| |||||||| | |||||||| |||| ||||| || Sbjct 18984634 CATGCCAAGCGCAAAACCGTCACCGCCATGGATGTGGTCTATGCGCTGAAGCGTCAGGGA 18984575 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699 |||| |||| || || || ||||| Sbjct 18984574 CGTACCCTTTACGGCTTCGGCGGTTAA 18984548 Score = 163 bits (180), Expect = 4e-36 Identities = 182/243 (75%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||||| || |||| | |||||| ||||||||||| || || |||||||| ||||| Sbjct 18963787 CGCCAAGCGCCACCGCAAAGTTCTTCGTGATAACATCCAGGGCATTACCAAGCCTGCTAT 18963728 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 || || || |||||||||||||| || ||||| |||| || | |||| || |||| Sbjct 18963727 TCGGCGCCTAGCTCGTCGTGGTGGGGTGAAGCGCATCTCCGGGCTCATCTACGAGGAGAC 18963668 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||| | || ||||| | ||||| ||| ||| |||| || || || || ||||| Sbjct 18963667 TCGCGGGGTGCTGAAGGTGTTCCTGGAGAACGTGATCCGCGACGCGGTCACTTACACCGA 18963608 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || |||||||||||| ||||||| | ||||| || | || || || || Sbjct 18963607 GCACGCCAAGCGCAAGACTGTCACCGCCATGGACGTGGTCTACGCGCTCAAGCGACAGGG 18963548 Query 16672 CCG 16674 ||| Sbjct 18963547 CCG 18963545 Score = 161 bits (178), Expect = 2e-35 Identities = 199/272 (73%), Gaps = 0/272 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||| ||||||| ||| || ||||| ||||| || |||||||| || ||||| Sbjct 18075237 CGCTAAGCGCCATCGCAAGGTTCTGCGCGATAATATCCAGGGCATCACCAAACCTGCTAT 18075296 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| || |||||||||||||| || || ||||| |||| || | |||||||||||| Sbjct 18075297 CCGCCGCCTGGCTCGTCGTGGCGGTGTGAAGCGCATCTCCGGGCTCATCTATGAAGAGAC 18075356 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || |||| | || || ||| ||| |||| || || || ||| ||||| Sbjct 18075357 CCGCGGGGTCCTGAAAGTGTTTCTGGAGAACGTGATCCGGGACGCGGTCACCTACACCGA 18075416 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 || || || || ||||| |||||| | ||||| | ||||| || | || || || || Sbjct 18075417 ACATGCCAAGCGGAAGACAGTCACCGCTATGGACGTGGTCTACGCTCTCAAGCGCCAGGG 18075476 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCTT 16703 ||||| | || |||||||| ||||| ||| Sbjct 18075477 CCGTACCCTCTACGGTTTTGGCGGTTAAGCTT 18075508 Score = 161 bits (178), Expect = 2e-35 Identities = 181/242 (75%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 |||||||| ||||| | | ||| |||||||| ||||| || ||||| |||||||| || Sbjct 18209392 GCTAAGCGCCATCGTAAAGTTCTGCGAGATAATATCCAGGGTATCACTAAGCCAGCCATT 18209333 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 ||||| ||||| ||||||||||| || || || | ||||| | ||||||| |||| | Sbjct 18209332 CGTCGCCTGGCCCGTCGTGGTGGTGTTAAACGGATTTCTGGGCTCATCTATGAGGAGACT 18209273 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | || | ||| | ||||| ||| ||| |||| || || || ||| |||||| Sbjct 18209272 CGCGGGGTGCTAAAGGTGTTCCTGGAGAACGTGATCCGGGACGCGGTCACCTACACCGAG 18209213 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| || || || ||||||||| |||||||| | ||||| || | || || || || Sbjct 18209212 CACGCCAAGCGCAAAACTGTCACCGCCATGGATGTGGTCTACGCGCTCAAGCGCCAGGGA 18209153 Query 16673 CG 16674 || Sbjct 18209152 CG 18209151 Score = 159 bits (176), Expect = 5e-35 Identities = 192/261 (74%), Gaps = 0/261 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||| || |||| ||| || || || ||||| || |||||||| || || || Sbjct 18079978 CGCTAAGCGCCACCGCAAGGTTCTGCGCGACAATATCCAGGGTATCACCAAACCCGCCAT 18079919 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||||| ||||||||||||||||| || ||||| |||| || | |||| || |||| Sbjct 18079918 TCGTCGCCTGGCTCGTCGTGGTGGTGTGAAGCGCATCTCCGGGCTCATCTACGAGGAGAC 18079859 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| || ||||| | || || | | || |||| || || || ||| ||||| Sbjct 18079858 CCGTGGGGTGCTGAAGGTATTTCTGGAAAATGTAATCCGGGACGCGGTCACCTACACCGA 18079799 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| ||||| |||||||||||| ||||||| | ||||| || | ||||| || || Sbjct 18079798 GCACGCCAAACGCAAGACTGTCACCGCCATGGACGTGGTCTACGCGCTCAAACGCCAGGG 18079739 Query 16672 CCGTAAGATTTATGGTTTTGG 16692 ||| | | |||||||| || Sbjct 18079738 CCGCACCCTCTATGGTTTCGG 18079718 Score = 159 bits (176), Expect = 5e-35 Identities = 192/261 (74%), Gaps = 0/261 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| || || ||||||| | ||| ||||| ||||||||||| || ||||| || ||||| Sbjct 18254440 CGCGAAACGCCATCGCAAAGTTCTGCGAGACAACATCCAAGGTATTACCAAACCTGCTAT 18254499 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 || || || |||||||||||||| || ||||| ||||||| | |||| || |||| Sbjct 18254500 TCGGCGCCTAGCTCGTCGTGGTGGTGTGAAGCGCATCTCTGGGCTCATCTACGAGGAGAC 18254559 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || | ||| | ||||| ||| ||| |||| || || || ||| ||||| Sbjct 18254560 ACGCGGGGTCCTAAAGGTGTTCCTGGAGAACGTGATCCGGGACGCGGTCACCTACACCGA 18254619 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||||||||| ||||||| | ||||| || | || ||||| || Sbjct 18254620 GCACGCCAAGCGCAAGACTGTCACTGCCATGGACGTGGTCTACGCGCTCAAGCGTCAGGG 18254679 Query 16672 CCGTAAGATTTATGGTTTTGG 16692 ||| | | || ||||| || Sbjct 18254680 CCGCACCCTCTACGGTTTCGG 18254700 Score = 159 bits (176), Expect = 5e-35 Identities = 192/261 (74%), Gaps = 0/261 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||||| || |||| | |||||| ||||||||||| || || || ||||| || || Sbjct 18953578 CGCCAAGCGCCACCGCAAAGTTCTTCGTGATAACATCCAGGGTATTACTAAGCCTGCCAT 18953637 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 || || ||||||||||||||||| || ||||| |||| || | |||| || |||| Sbjct 18953638 TCGGCGCCTGGCTCGTCGTGGTGGTGTAAAGCGCATCTCCGGGCTCATCTACGAGGAGAC 18953697 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||| | || | ||| | ||||| ||| ||| |||| || || || || ||||| Sbjct 18953698 TCGCGGGGTCCTAAAGGTGTTCCTGGAGAACGTGATCCGGGACGCGGTCACTTACACCGA 18953757 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || |||||||||||| ||||||| | ||||| || | || ||||| || Sbjct 18953758 GCACGCCAAGCGCAAGACTGTCACCGCCATGGACGTGGTCTACGCGCTCAAGCGTCAGGG 18953817 Query 16672 CCGTAAGATTTATGGTTTTGG 16692 ||| | | || ||||| || Sbjct 18953818 CCGCACTCTCTACGGTTTCGG 18953838 Score = 131 bits (144), Expect = 3e-26 Identities = 186/261 (71%), Gaps = 3/261 (1%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| |||||||| || | | | ||||||| || || || || |||| ||||| ||||| Sbjct 18611104 CGCCAAGCGTCACCGTAAAGTTTTTCGAGACAATATTCAGGGCATCATTAAGCCCGCTAT 18611163 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 || || |||||||| ||||| ||||||||||| ||||||| |||| || |||| Sbjct 18611164 TCGCCGCCTGGCTCGGCGTGGAGGAGTCAAGCGCATCTCTGG---CCTCTACGAGGAGAC 18611220 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || ||||| | ||| | | | || | ||| ||||| | ||| || || Sbjct 18611221 CCGCGGGGTGCTGAAGGTGTTCTTTGATAATGTGACCCAGGATGCAGTTACCTACACAGA 18611280 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || |||||||||||| ||||||| | ||||| || | || || ||||| Sbjct 18611281 GCACGCCAAGCGCAAGACTGTCACCGCCATGGACGTGGTCTACGCGCTCAAGCGCCAAGG 18611340 Query 16672 CCGTAAGATTTATGGTTTTGG 16692 || | | ||||| || || Sbjct 18611341 ACGCACCCTCTATGGCTTCGG 18611361 >seq7 Length=108433636 Score = 123 bits (136), Expect = 4e-24 Identities = 190/271 (70%), Gaps = 4/271 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 |||||||| || |||| ||| | || |||||||| || ||||| |||| |||| Sbjct 43268182 GCTAAGCGCCACCGCAAGGTTCTGTGCGACAACATCCAGGGCATCACTAAGC----TATC 43268237 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 | || ||||||||||||||||| || ||||| ||||||| | | || | |||| Sbjct 43268238 CACCGCCTGGCTCGTCGTGGTGGTGTGAAGCGCATCTCTGGGCTCATTTACAAGGAGACC 43268297 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 | | || |||| | || | ||| || |||| || || || ||| |||||| Sbjct 43268298 CACGGGGTCCTGAAAGTGTTTCCGGAGAACGCGATCCGGGACGCAGTCACCTACACCGAG 43268357 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| || || ||||||| |||| ||| |||| | ||||| || | || || || ||| Sbjct 43268358 CACGCCAAGCGGAAGACTGGCACCGCCAGGGATGTGGTCTACGCTCTCAAGCGCCAGGGC 43268417 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAATCTT 16703 |||| | || ||||| || |||||| ||| Sbjct 43268418 CGTACCCTCTACGGTTTCGGCAGTTAAGCTT 43268448 >seq3 Length=120038259 Score = 123 bits (136), Expect = 4e-24 Identities = 194/275 (71%), Gaps = 2/275 (1%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTC-GAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| ||||| || |||| | |||| |||||||||||||||| ||||| ||||| || | Sbjct 99395726 CGCCAAGCGCCACCGCAAAG-TCTTGAGAGATAACATCCAAGGCATCACTAAGCCGGCCA 99395784 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 | || || || ||||| ||||| ||||||||||| | || || | | || || |||| Sbjct 99395785 TTCGGCGCCTTGCTCGGCGTGGGGGAGTCAAGCGCATTTCCGGCCTCATTTACGAGGAGA 99395844 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 || | || |||||| | || || ||| ||||| | || || || ||| || | Sbjct 99395845 CCCGAGGCGTGTTGAAGGTGTTTCTGGAGAATGTTATTCGGGACGCAGTCACCTACACGG 99395904 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || || ||||| ||||| ||||||| | ||||| || | || || || | Sbjct 99395905 AGCACGCCAAGCGCAAGACGGTCACTGCCATGGACGTGGTCTACGCGCTAAAGCGGCAGG 99395964 Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAATCTTCT 16705 | || | | || || || ||| ||| | || || Sbjct 99395965 GACGCACCCTGTACGGCTTCGGAGGTTGAGCTGCT 99395999 >seq5 Length=119020588 Score = 120 bits (132), Expect = 5e-23 Identities = 174/243 (72%), Gaps = 2/243 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATC-GCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||||| | || ||| | || || |||||||| || || || ||||| || || Sbjct 93739954 GCCAAGCGTCATCGGAAGGTCT-TACGGGACAACATCCAGGGCATTACGAAGCCCGCAAT 93740012 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 || ||||| || || |||||||| |||||||| |||| || | |||| || |||| Sbjct 93740013 TCGCCGTCTTGCCCGCCGTGGTGGCGTCAAGCGCATCTCAGGGCTCATCTACGAGGAGAC 93740072 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| || | || | ||| | | | ||| |||| ||||| | || || || Sbjct 93740073 CCGTGGAGTGCTCAAAGTGTTCTTGGAAAACGTGATCCGCGATGCAGTGACGTACACGGA 93740132 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| || || ||||| ||||| |||||||| | || ||||| ||||||| || || Sbjct 93740133 ACACGCCAAGCGCAAGACGGTCACGGCCATGGATGTGGTGTATGCTCTGAAACGCCAGGG 93740192 Query 16672 CCG 16674 ||| Sbjct 93740193 CCG 93740195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79047855820551