Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capra_20hircus_20[refseq_20GCF_5F001704415.1_202016-08-24] 29,907 sequences; 2,922,813,246 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq18 145 2e-29 seq19 143 6e-29 seq17 127 5e-24 seq26 123 6e-23 seq3 113 1e-19 seq1 104 6e-17 seq11 95.1 3e-14 >seq18 Length=67275902 Score = 145 bits (160), Expect = 2e-29 Identities = 163/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 |||||||||| || || || ||||| ||||||||||| | ||||||||||| |||||| Sbjct 38083882 CGAAGTCTCAACACTAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTA 38083941 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||||||| ||||| || || ||||| || | |||||||| ||| ||||||| Sbjct 38083942 CGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCT 38084001 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| || ||| | || || | | || || || | Sbjct 38084002 TCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGCTCGACCTCAAGA 38084061 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| ||||| || || ||||| ||||| || Sbjct 38084062 GTGATGGTCTTCCCCGTTAGGGTCTTCACGAAAATCTG 38084099 Score = 91.5 bits (100), Expect = 3e-13 Identities = 80/100 (80%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 200930 AAAAACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 200989 ||| ||| ||||| || || ||||| ||||||||||| | |||||| | || |||||| Sbjct 38083981 AAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAACA 38083922 Query 200990 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029 | || || ||||| |||||||| || || ||||||||||| Sbjct 38083921 TTCAAAAGGAGTCCACTCTTCATCTAGTGTTGAGACTTCG 38083882 >seq19 Length=62516450 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| || ||||||||||| |||| |||||| |||| | ||| | |||||| Sbjct 32928138 AGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 32928197 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| || || |||||||| | ||||||||| || ||| ||||| ||| Sbjct 32928198 TCCAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTATCC 32928257 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||||||| |||| |||||| | | || || |||| ||||| ||| Sbjct 32928258 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 32928317 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || ||||| || || || Sbjct 32928318 TTGCCGGTCAGGGTCTTCACGAAGATCTG 32928346 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| || ||||||||||| |||| ||||| |||| | ||| | |||||| Sbjct 32928366 AGAACCAGGTGCAGGGTCGACTCCTTCTGGATATTGTAATCAGAAAGAGTGCGACCATCT 32928425 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| ||||| |||||||| | ||||||||| || ||| ||||| ||| Sbjct 32928426 TCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTATCC 32928485 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||||||| |||| |||||| | | ||||| |||| ||||| ||| Sbjct 32928486 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCTACCTCCAGGGTGATGGTC 32928545 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || ||||| || || || Sbjct 32928546 TTGCCGGTCAGGGTCTTCACGAAGATCTG 32928574 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| || ||||||||||| |||| |||||| |||| | ||| | |||||| Sbjct 32928594 AGAACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 32928653 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| ||||| |||||||| | ||||||||| || ||| ||||| ||| Sbjct 32928654 TCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTATCC 32928713 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||||||| |||| |||||| | | || || |||| ||||| ||| Sbjct 32928714 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 32928773 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || ||||| || || || Sbjct 32928774 TTGCCGGTCAGGGTCTTCACGAAGATCTG 32928802 Score = 143 bits (158), Expect = 6e-29 Identities = 163/218 (75%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| || ||||||||||| |||| |||||| |||| | ||| | |||||| Sbjct 32928822 AGAACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 32928881 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| ||||| |||||||| | ||||||||| || ||| ||||| ||| Sbjct 32928882 TCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTATCC 32928941 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| |||||| |||| |||||| | | || || |||| ||||| ||| Sbjct 32928942 TGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 32929001 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635 || || || || || ||||| || ||||| |||||| Sbjct 32929002 TTGCCGGTCAGGGTCTTCACGAAGATTTG---CATTTT 32929036 >seq17 Length=71137785 Score = 127 bits (140), Expect = 5e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 |||||| ||||| || || |||||||| |||| ||||||||||| || || | ||||| Sbjct 20310025 CAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATC 20310084 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 ||||||||| || ||||| ||||| || | ||||||||| || || || ||| || Sbjct 20310085 TTCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTC 20310144 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 || ||||| ||| ||| |||| |||||| | | || || |||| ||||| || Sbjct 20310145 TTGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 20310204 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| ||||| | || ||||| || || || Sbjct 20310205 CTTGCCCGTCAAGGTCTTCACGAAGATCTG 20310234 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| ||||| |||||||| |||| ||||||||||| || || | ||||| Sbjct 20310254 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCC 20310313 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||||||| || ||||| ||||| || | ||||||||| || || || ||| || Sbjct 20310314 TCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCT 20310373 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| |||||| | | || || |||| ||||| ||| Sbjct 20310374 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 20310433 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| | || ||||| || || || Sbjct 20310434 TTGCCCGTCAAGGTCTTCACGAAGATCTG 20310462 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| ||||| |||||||| |||| ||||||||||| || || | ||||| Sbjct 20310482 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCC 20310541 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||||||| || ||||| ||||| || | ||||||||| || || || ||| || Sbjct 20310542 TCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCT 20310601 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| |||||| | | || || |||| ||||| ||| Sbjct 20310602 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 20310661 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| | || ||||| || || || Sbjct 20310662 TTGCCCGTCAAGGTCTTCACGAAGATCTG 20310690 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| ||||| |||||||| |||| ||||||||||| || || | ||||| Sbjct 20310710 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCC 20310769 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||||||| || ||||| ||||| || | ||||||||| || || || ||| || Sbjct 20310770 TCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCT 20310829 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| |||||| | | || || |||| ||||| ||| Sbjct 20310830 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 20310889 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| | || ||||| || || || Sbjct 20310890 TTGCCCGTCAAGGTCTTCACGAAGATCTG 20310918 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| ||||| |||||||| |||| ||||||||||| || || | ||||| Sbjct 20310938 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCC 20310997 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||||||| || ||||| ||||| || | ||||||||| || || || ||| || Sbjct 20310998 TCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCT 20311057 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| |||||| | | || || |||| ||||| ||| Sbjct 20311058 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 20311117 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| | || ||||| || || || Sbjct 20311118 TTGCCCGTCAAGGTCTTCACGAAGATCTG 20311146 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| ||||| |||||||| |||| ||||||||||| || || | ||||| Sbjct 20311166 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCC 20311225 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||||||| || ||||| ||||| || | ||||||||| || || || ||| || Sbjct 20311226 TCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCT 20311285 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| |||||| | | || || |||| ||||| ||| Sbjct 20311286 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 20311345 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| | || ||||| || || || Sbjct 20311346 TTGCCCGTCAAGGTCTTCACGAAGATCTG 20311374 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| ||||| |||||||| |||| ||||||||||| || || | ||||| Sbjct 20311394 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCC 20311453 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||||||| || ||||| ||||| || | ||||||||| || || || ||| || Sbjct 20311454 TCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCT 20311513 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| |||||| | | || || |||| ||||| ||| Sbjct 20311514 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 20311573 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| | || ||||| || || || Sbjct 20311574 TTGCCCGTCAAGGTCTTCACGAAGATCTG 20311602 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| ||||| |||||||| |||| ||||||||||| || || | ||||| Sbjct 20311622 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCC 20311681 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||||||| || ||||| ||||| || | ||||||||| || || || ||| || Sbjct 20311682 TCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCT 20311741 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| |||||| | | || || |||| ||||| ||| Sbjct 20311742 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 20311801 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| | || ||||| || || || Sbjct 20311802 TTGCCCGTCAAGGTCTTCACGAAGATCTG 20311830 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| ||||| ||||| || |||| ||||||||||| || || | |||||| Sbjct 20311850 AGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 20311909 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||||||| || ||||| ||||| | | ||||||||| || || |||||| || Sbjct 20311910 TCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCTTCTTTTTCT 20311969 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| || |||| |||||| | | || || |||| ||||| || Sbjct 20311970 TGGATCTTCACCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTT 20312029 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || ||||| || || Sbjct 20312030 TTACCAGTGAGGGTCTTTACAAAGATCTG 20312058 Score = 102 bits (112), Expect = 2e-16 Identities = 153/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 199410 GAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCC 199469 ||||||||| | ||| || ||||| ||||||||||| | ||||||||||| ||||| Sbjct 30372891 GAAGTCTCAACAAAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAG--- 30372947 Query 199470 TTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTT 199529 | |||||| ||| ||||| || || ||||| || | |||||||| ||| | ||||| Sbjct 30372948 -TACATCTTTCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAGCTCCTT 30373006 Query 199530 CTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACG 199589 | |||| | ||| ||| || ||| | || |||| | || || || | Sbjct 30373007 CCTTACCCTGGACCTTGACCTTTACATTTTCTATGGGATCTGAGGGCTCGACCTCAGGAG 30373066 Query 199590 TGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||| ||||| ||| | || || ||||| ||||| || Sbjct 30373067 TGATGGTCTTCCCCATCAGGGTCTTCACGAAAATCTG 30373103 >seq26 Length=51421553 Score = 123 bits (136), Expect = 6e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 |||||||||| || || || ||||| ||||||||||| | ||||||||||| |||||| Sbjct 9312794 CGAAGTCTCAACACTAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTA 9312853 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||||||| ||||| || | ||||| || | |||||||| ||| ||||||| Sbjct 9312854 CATCCATCTTCCAGTTGCTTGCCAACAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCT 9312913 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| || ||| || || | | || || || | Sbjct 9312914 TCCTTATCCTGGATCTTGGCCTTTACATTTTCTGTTGTATCCGAGGGCTCGACCTCAAGA 9312973 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| | ||||| || || || || |||| ||||| || Sbjct 9312974 GTGGTGGTCTTCCCTGTCAGGGTCTTCATGAAAATCTG 9313011 Score = 86.0 bits (94), Expect = 1e-11 Identities = 79/100 (79%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 200930 AAAAACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 200989 ||| ||| ||||| | || ||||| ||||||||||| | |||||| | || |||||| Sbjct 9312893 AAAGACTGATCTTTGTTGGCAAGCAACTGGAAGATGGATGTACTTTGTCTGACTACAACA 9312834 Query 200990 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029 | || || ||||| |||||||| || || ||||||||||| Sbjct 9312833 TTCAAAAGGAGTCCACTCTTCATCTAGTGTTGAGACTTCG 9312794 >seq3 Length=120038259 Score = 113 bits (124), Expect = 1e-19 Identities = 156/217 (72%), Gaps = 1/217 (0%) Strand=Plus/Plus Query 199411 AAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCT 199470 |||||||| || | || ||||| ||||||||||| | ||||||||||| ||||| Sbjct 100093964 AAGTCTCAACACTAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGCATG 100094023 Query 199471 TCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTC 199530 ||||||||||| ||||| || || ||||| || | |||||||| ||| ||||||||| Sbjct 100094024 TCCATCTTCCACGTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTC 100094083 Query 199531 TCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGT 199590 ||||| ||||| | | || ||| | || || | | || || | | || Sbjct 100094084 CTTATCCTGGATCTTGACCATTACATCTTCTATTGTATCCGAGGGCTCGACCTTGAGAGT 100094143 Query 199591 GATCGTCTTACCCGTGA-GAGTTTTCACAAAAATTTG 199626 ||| ||||| || || | |||| ||||||||||| || Sbjct 100094144 GATGGTCTTCCCTGTCAGGAGTCTTCACAAAAATCTG 100094180 >seq1 Length=157403528 Score = 104 bits (114), Expect = 6e-17 Identities = 95/120 (79%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 199411 AAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCT 199470 |||||||| ||||| | ||||| | ||||||||| | |||||||||| |||||| | Sbjct 45884709 AAGTCTCAACACAAGAGGAAGAGTGGGCTCCTTTTGAATGTTGTAGTCAAACAAAGTACA 45884768 Query 199471 TCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTC 199530 |||||||||||| ||||| || || ||||| || | || ||||| |||| ||||| ||| Sbjct 45884769 TCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGGTGGTCAGGAAGAATTCGTTC 45884828 >seq11 Length=106225002 Score = 95.1 bits (104), Expect = 3e-14 Identities = 104/137 (76%), Gaps = 1/137 (1%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||| ||||||| ||||| || ||||| ||||||||||| | |||||||| | ||||| Sbjct 47457348 CGACGTCTCAGCACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTTGGTCAAAG-A 47457406 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||||||| || || || || | ||| || | |||||||| ||| || ||| Sbjct 47457407 CATCCATCTTCCAGTTGTTTGCCAGCAACGATCAGTCTTTGCTGGTCAGGAGGAACACCT 47457466 Query 199529 TCTCGCTCCTGAATCTT 199545 || ||||| ||||| Sbjct 47457467 TCCTTATCCTGGATCTT 47457483 Score = 89.7 bits (98), Expect = 1e-12 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499 ||||||| | ||||||||||| |||||| | |||||||||||| ||||| || || |||| Sbjct 37571037 CCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGA 37570978 Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || | |||||||| ||| ||||||| Sbjct 37570977 TCAGTCTTTGCTGGTCAGGAGGAATTCCT 37570949 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178469856768769