Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capra_20hircus_20[refseq_20GCF_5F001704415.1_202016-08-24] 29,907 sequences; 2,922,813,246 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq23 125 9e-23 seq3 125 9e-23 seq14303 104 3e-16 seq11 93.3 5e-13 seq22 91.5 2e-12 seq1 89.7 6e-12 seq20 87.8 2e-11 seq15 87.8 2e-11 >seq23 Length=48866549 Score = 125 bits (138), Expect = 9e-23 Identities = 149/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| | | | |||||| || || ||||||||||| | | || Sbjct 18279490 GCTTGGCCAGCTCCCCGGGTAGCAGCAGGCGTACCGCTGTCTGGATCTCCCTGGATGTGA 18279431 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| || |||||| ||||||| |||| | Sbjct 18279430 TAGTCGAGCGCTTGTTGTAATGCGCCAGGCGAGACGCCTCGCCAGCGATGCGCTCGAAGA 18279371 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||||||| |||||||||| ||| | |||| |||||||| ||| |||| Sbjct 18279370 TGTCGTTGACAAAAGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGT 18279311 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 18279310 GGACCTGCTTCAGCACCTTGTA 18279289 Score = 125 bits (138), Expect = 9e-23 Identities = 149/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || ||| | |||||||||||| ||||||||||| | | || Sbjct 18601865 GCTTGGCCAGCTCCCCAGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGATGTGA 18601924 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| || |||||| ||||||| |||| | Sbjct 18601925 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGAGATGCCTCGCCCGCGATGCGCTCGAAAA 18601984 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| ||||| |||||||||| ||| | |||| |||||||| ||| |||| Sbjct 18601985 TGTCGTTTACAAAGGAGTTCATGATACCCATGGCCTTGGACGAGATGCCGGTGTCCGGGT 18602044 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | || ||||| ||||||||||| Sbjct 18602045 GGACTTGCTTCAGCACCTTGTA 18602066 Score = 125 bits (138), Expect = 9e-23 Identities = 149/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || ||| | |||||||||||| ||||||||||| | | || Sbjct 18611651 GCTTGGCCAGCTCCCCAGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGATGTGA 18611710 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| ||||||||||||| |||||| ||||||| |||| | Sbjct 18611711 TGGTCGAGCGCTTGTTGTAGTGCGCCAGACGCGATGCCTCGCCCGCGATGCGCTCGAAGA 18611770 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | ||||| || || |||||||||| ||| | |||| |||||||| ||| |||| Sbjct 18611771 TATCGTTCACGAAGGAGTTCATGATACCCATGGCCTTGGACGAGATGCCGGTGTCCGGGT 18611830 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||| ||||| Sbjct 18611831 GGACCTGCTTCAGCACTTTGTA 18611852 Score = 122 bits (134), Expect = 1e-21 Identities = 148/202 (73%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||| ||||||||||||||||| | | || Sbjct 18204481 GCTTGGCCAGCTCCCCGGGCAACAGCAGGCGAACGGCGGTCTGGATCTCCCTGGATGTGA 18204422 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||||| | || ||||| || |||||| ||||||| |||| | Sbjct 18204421 TGGTTGAACGCTTGTTGTAATGGGCCAGGCGCGATGCCTCGCCAGCGATGCGCTCGAAAA 18204362 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | || || || ||||| ||||||| ||| | |||| ||||||||| |||||||| Sbjct 18204361 TATCATTCACGAACGAATTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 18204302 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 18204301 GGACCTGCTTCAGCACCTTGTA 18204280 Score = 122 bits (134), Expect = 1e-21 Identities = 148/202 (73%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || ||| | ||||||||||||||||||||||| | | || Sbjct 18266991 GCTTGGCCAGCTCCCCAGGCAACAGAAGGCGCACGGCGGTCTGGATCTCCCTGGATGTGA 18266932 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | ||||||||||| |||||| ||||||| || | | Sbjct 18266931 TGGTCGAGCGCTTGTTATAATGCGCCAGACGCGATGCCTCGCCTGCGATGCGCTCAAATA 18266872 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | ||||| || || |||||||||| ||| | |||| |||||| || ||| |||| Sbjct 18266871 TATCGTTCACGAAGGAGTTCATGATGCCCATGGCCTTGGAGGAGATTCCAGTGTCCGGGT 18266812 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 18266811 GGACCTGCTTCAGCACCTTGTA 18266790 Score = 116 bits (128), Expect = 5e-20 Identities = 145/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405 |||||| || || ||| | ||||| ||||| ||||||||||| | | ||| | Sbjct 18188095 TGGCCAACTCCCCAGGCAACAGTAGGCGTACGGCCGTCTGGATCTCCCTGGATGTGATAG 18188036 Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465 | ||||||||| | ||||||||||| ||||| ||||||| |||| |||| Sbjct 18188035 TCGAGCGCTTGTTGTAATGCGCCAGACGCGACGCCTCACCCGCGATGCGCTCGAAGATGT 18187976 Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525 |||||||||| || ||||||| ||| | |||| |||||||| ||| ||||| | Sbjct 18187975 CGTTGACAAATGAATTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGTGGA 18187916 Query 1254526 CCTGCTTGAGCACCTTGTA 1254544 ||||||| ||||||||||| Sbjct 18187915 CCTGCTTCAGCACCTTGTA 18187897 Score = 116 bits (128), Expect = 5e-20 Identities = 147/202 (73%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| | | | ||||||||||| ||||||||||| | | || Sbjct 18969988 GCTTGGCCAGCTCTCCGGGAAGCAGGAGGCGCACGGCCGTCTGGATCTCCCTGGATGTGA 18969929 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | || ||||| || |||||| ||||||| |||| | Sbjct 18969928 TGGTCGAGCGCTTGTTGTAATGAGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAAA 18969869 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| || ||||| ||||||| ||| | |||| |||||||| ||| |||| Sbjct 18969868 TGTCGTTCACGAACGAATTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGT 18969809 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 18969808 GGACCTGCTTCAGCACCTTGTA 18969787 Score = 116 bits (128), Expect = 5e-20 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407 |||||||| ||| | | | |||||||||||| ||||||||||| | | ||| || Sbjct 18978362 GCCAGTTCTCCGGGAAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGATGTGATGGTC 18978421 Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1254467 ||||||||| | || ||||| || |||||| ||||||| || | || ||| Sbjct 18978422 GAGCGCTTGTTGTAATGAGCCAGGCGCGATGCCTCGCCCGCGATGCGCTCAAAAATATCG 18978481 Query 1254468 TTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACC 1254527 ||||| ||||| ||||||| ||| | |||| |||||||| ||| ||||| ||| Sbjct 18978482 TTGACGAACGAATTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGTGGACC 18978541 Query 1254528 TGCTTGAGCACCTTGTA 1254544 ||||| ||||||||||| Sbjct 18978542 TGCTTCAGCACCTTGTA 18978558 Score = 113 bits (124), Expect = 6e-19 Identities = 146/202 (72%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| || ||| ||| | ||||||||| || ||||||||||| | | || Sbjct 18994410 GCTTGGCCAACTCCCCGGGCAGCAGCAGGCGCACAGCCGTCTGGATCTCCCTGGATGTGA 18994351 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | || ||||| || |||||| ||||||| |||| | Sbjct 18994350 TGGTCGAGCGCTTGTTGTAATGAGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAAA 18994291 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | ||||| || ||||| ||||||| ||| | |||| |||||||| ||| |||| Sbjct 18994290 TATCGTTCACGAACGAATTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGT 18994231 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 18994230 GGACCTGCTTCAGCACCTTGTA 18994209 Score = 107 bits (118), Expect = 2e-17 Identities = 143/199 (72%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405 |||||| || || ||| | |||||||||||| ||||||||||| | | ||| | Sbjct 18154383 TGGCCAACTCCCCAGGCAACAGCAGGCGCACGGCCGTCTGGATCTCCCTGGATGTGATGG 18154442 Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465 | ||||||||| | ||||| || || |||||| | || || |||| |||| Sbjct 18154443 TCGAGCGCTTGTTGTAATGCGCAAGGCGCGATGCCTCGCCCGCAATACGCTCGAAGATGT 18154502 Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525 ||||||| || || ||||||| ||| | |||| |||||||| ||| ||||| | Sbjct 18154503 CGTTGACGAAGGAATTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGTGGA 18154562 Query 1254526 CCTGCTTGAGCACCTTGTA 1254544 ||||||| ||||||||||| Sbjct 18154563 CCTGCTTCAGCACCTTGTA 18154581 Score = 107 bits (118), Expect = 2e-17 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407 ||||| || || ||| | || |||||||| ||||||||||| | | ||| || Sbjct 18950643 GCCAGCTCCCCAGGCAGCAGAAGACGCACGGCCGTCTGGATCTCCCTGGATGTGATGGTC 18950584 Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1254467 ||||||||| | || ||||| || |||||| ||||||| |||| |||||| Sbjct 18950583 GAGCGCTTGTTGTAATGAGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGTCG 18950524 Query 1254468 TTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACC 1254527 ||||| || || ||||||| ||| | |||| |||||||| ||| ||||| ||| Sbjct 18950523 TTGACGAAGGAATTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGTGGACC 18950464 Query 1254528 TGCTTGAGCACCTTGTA 1254544 ||||| ||||||||||| Sbjct 18950463 TGCTTCAGCACCTTGTA 18950447 Score = 104 bits (114), Expect = 3e-16 Identities = 144/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| | | || Sbjct 18098283 GCTTGGCCAGCTCCCCGGGCAGCAACAGGCGCACGGCCGTCTGGATCTCCCTGGATGTGA 18098342 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||||| | |||||||| || |||||| ||||||| |||| | Sbjct 18098343 TGGTCGAACGCTTGTTGTAATGCGCCAGGCGTGACGCCTCGCCCGCGATGCGCTCGAAAA 18098402 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| ||||| |||||||||| ||| | ||| || || || || || | Sbjct 18098403 TGTCGTTCACAAAGGAGTTCATGATACCCATGGCCTTAGATGAAATACCAGTATCTGGAT 18098462 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| || |||||||| Sbjct 18098463 GGACCTGCTTCAGAACCTTGTA 18098484 Score = 104 bits (114), Expect = 3e-16 Identities = 144/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||||||||||||||||||||||| | | | Sbjct 18219217 GCTTGGCCAGCTCCCCGGGCAGCAGTAGGCGCACGGCGGTCTGGATCTCCCTGGATGTAA 18219158 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | || ||||| || |||||| ||||||| || | | Sbjct 18219157 TGGTCGAGCGCTTGTTGTAATGTGCCAGGCGAGACGCCTCGCCCGCGATGCGCTCAAAGA 18219098 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| |||||||| |||||||||| ||| | |||| ||||| || ||| || | Sbjct 18219097 TGTCATTGACAAAAGAGTTCATGATGCCCATGGCCTTGGACGAGATACCGGTGTCCGGAT 18219038 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | || || || ||||||||||| Sbjct 18219037 GGACTTGTTTCAGCACCTTGTA 18219016 Score = 104 bits (114), Expect = 3e-16 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407 ||||| || || ||| | || |||||||| ||||||||||| | | ||| || Sbjct 18943015 GCCAGCTCCCCAGGCAGCAGAAGACGCACGGCCGTCTGGATCTCCCTGGATGTGATGGTC 18943074 Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1254467 ||||||||| | || ||||| || |||||| ||||||| |||| |||||| Sbjct 18943075 GAGCGCTTGTTGTAATGAGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGTCG 18943134 Query 1254468 TTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACC 1254527 ||||| || || ||||||| ||| | ||| |||||||| ||| ||||| ||| Sbjct 18943135 TTGACGAAGGAATTCATGATGCCCATGGCCTTAGACGAGATGCCGGTGTCCGGGTGGACC 18943194 Query 1254528 TGCTTGAGCACCTTGTA 1254544 ||||| ||||||||||| Sbjct 18943195 TGCTTCAGCACCTTGTA 18943211 Score = 102 bits (112), Expect = 1e-15 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || ||| | |||||| || || || ||||| || | | || Sbjct 17832299 GCTTGGCCAGCTCCCCAGGCAGCAGCAGGCGTACAGCCGTTTGGATTTCCCTGGACGTGA 17832358 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| | || ||||| || |||||| ||||||| |||| | Sbjct 17832359 TAGTGGAGCGCTTGTTATAATGTGCCAGGCGCGACGCCTCGCCTGCGATGCGCTCGAAAA 17832418 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| |||||||||| ||||||| ||| | ||| |||||||| || |||| Sbjct 17832419 TGTCACTGACAAACGAATTCATGATGCTCATGGCCTTTGAAGAGATGCCGGTATCTGGGT 17832478 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | || ||||| ||||||||||||||| Sbjct 17832479 GAACTTGCTTCAGCACCTTGTAGATG 17832504 Score = 98.7 bits (108), Expect = 1e-14 Identities = 143/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || ||| | ||||||||| || ||||||||||| | | | Sbjct 18225157 GCTTGGCCAGCTCCCCAGGCAGCAGCAGGCGCACAGCAGTCTGGATCTCTCTGGATGTAA 18225216 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | || |||| || ||||| ||||||| |||| | Sbjct 18225217 TAGTCGAGCGCTTGTTATAATGAGCCAAGCGCGATGCCTCACCAGCGATGCGCTCGAAAA 18225276 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| |||||||| ||| || | Sbjct 18225277 TGTCGTTGACGAAGGAGTTCATGATGCCCATAGCCTTGGATGAGATGCCGGTGTCCGGAT 18225336 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | || ||||| ||||||||||| Sbjct 18225337 GGACTTGCTTCAGCACCTTGTA 18225358 >seq3 Length=120038259 Score = 125 bits (138), Expect = 9e-23 Identities = 149/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| ||||| ||| | |||||||||||| ||||||||||| || | || Sbjct 99442653 GCTTGGCCAGCTCGCCAGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGAGACGTGA 99442712 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | ||||||| || || ||| ||||||| |||| | Sbjct 99442713 TGGTTGAGCGCTTGTTGTAATGCGCCAAGCGCGACGCTTCGCCCGCGATGCGCTCGAAGA 99442772 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||||||| |||||||||| ||| | |||| || || || ||| |||| Sbjct 99442773 TGTCGTTGACAAATGAGTTCATGATGCCCATGGCCTTGGACGAAATACCGGTGTCTGGGT 99442832 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| | ||||||||| Sbjct 99442833 GCACCTGCTTCAACACCTTGTA 99442854 Score = 116 bits (128), Expect = 5e-20 Identities = 147/202 (73%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| ||| | |||||||||||| || ||| |||| || | || Sbjct 99406409 GCTTGGCTAGCTCGCCGGGCAGCAGCAGGCGCACGGCCGTTTGGGTCTCCCGGGACGTGA 99406350 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | || |||| || || ||| ||||||| |||| | Sbjct 99406349 TGGTCGAGCGCTTGTTGTAATGGGCCAAGCGCGACGCTTCGCCCGCGATGCGCTCGAAGA 99406290 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||||||| |||||||||| ||| | |||| |||||||| ||| |||| Sbjct 99406289 TGTCGTTGACAAATGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGT 99406230 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| | ||| ||||| Sbjct 99406229 GCACCTGCTTCAACACTTTGTA 99406208 Score = 116 bits (128), Expect = 5e-20 Identities = 147/202 (73%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| ||| | |||||||||||| || ||| |||| || | || Sbjct 99420518 GCTTGGCTAGCTCGCCGGGCAGCAGCAGGCGCACGGCCGTTTGGGTCTCCCGGGACGTGA 99420577 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | || |||| || || ||| ||||||| |||| | Sbjct 99420578 TGGTCGAGCGCTTGTTGTAATGGGCCAAGCGCGACGCTTCGCCCGCGATGCGCTCGAAGA 99420637 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||||||| |||||||||| ||| | |||| |||||||| ||| |||| Sbjct 99420638 TGTCGTTGACAAATGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGT 99420697 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| | ||| ||||| Sbjct 99420698 GCACCTGCTTCAACACTTTGTA 99420719 Score = 113 bits (124), Expect = 6e-19 Identities = 146/202 (72%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| | | | ||||||||| || ||||||||||| || | | Sbjct 99384326 GCTTGGCCAGCTCACCGGGAAGCAGCAGGCGCACCGCCGTCTGGATCTCTCGAGAAGTAA 99384385 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | ||||||||||| || ||| | | ||||| |||| | Sbjct 99384386 TGGTTGAGCGCTTGTTGTAATGCGCCAGACGCGACGCTTCGCCGGCAATGCGCTCGAAGA 99384445 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| ||||| || || ||||||| ||| | |||| |||||||| ||| |||| Sbjct 99384446 TGTCATTGACGAAGGAATTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGT 99384505 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 ||||||| || |||||||| || Sbjct 99384506 GCACCTGTTTCAGCACCTTATA 99384527 >seq14303 Length=5897 Score = 104 bits (114), Expect = 3e-16 Identities = 142/197 (72%), Gaps = 1/197 (1%) Strand=Plus/Minus Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407 ||||| || || ||| | || |||||||| ||||||||||| | | ||| || Sbjct 1772 GCCAGCTCCCCAGGCAGCAGAAGACGCACGGCCGTCTGGATCTCCCTGGATGTGATGGTC 1713 Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1254467 ||||||||| | || ||||| || |||||| ||||||| |||| |||||| Sbjct 1712 GAGCGCTTGTTGTAATGAGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGTCG 1653 Query 1254468 TTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACC 1254527 ||||| || || ||||||| | ||| | ||| |||||||| ||| ||||| ||| Sbjct 1652 TTGACGAAGGAATTCATGA-TGCCATGGCCTTAGACGAGATGCCGGTGTCCGGGTGGACC 1594 Query 1254528 TGCTTGAGCACCTTGTA 1254544 ||||| ||||||||||| Sbjct 1593 TGCTTCAGCACCTTGTA 1577 >seq11 Length=106225002 Score = 93.3 bits (102), Expect = 5e-13 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 1592165 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTT 1592224 || ||||||||| | || | || || |||||| | |||||||| | |||| ||| || Sbjct 9632361 ACACTCTTTGAGCTTATATTGGCAGCAAACTACTTAGACATCAAAGGTTTGCTTGATGTT 9632302 Query 1592225 GGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACC 1592284 |||||| |||| || || |||||||||||||| | || |||||||| || ||||| Sbjct 9632301 ACCTGCAAGACTGTTGCTAATATGATCAAGGGCAAAACTCCTGAGGAGATTCGAAAGACA 9632242 Query 1592285 TTTAACATCAA 1592295 || || ||||| Sbjct 9632241 TTCAATATCAA 9632231 >seq22 Length=60283066 Score = 91.5 bits (100), Expect = 2e-12 Identities = 310/476 (65%), Gaps = 14/476 (3%) Strand=Plus/Minus Query 1852161 CAAAGGCAAATATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGCT 1852220 |||||| || ||||| | ||| || || ||||||||||| || || | | | | Sbjct 43613226 CAAAGGTGAAAATCTTTCTCTGATCAACACCTCCAAACTGGGCATCCACTTTCAAATATT 43613167 Query 1852221 GCTCGTCGAGGGCCTGCATGAGCGGGTAGAGCACGTTGCTCAGGAGCGGGTTGCGGTCCA 1852280 || || | |||||||| | |||| |||| | ||||| || |||| | |||| Sbjct 43613166 CTTCATCCAAGGCCTGCAGCCCCAGGTACAGCAAGCCACTCAGCAGAGGGT---GCTCCA 43613110 Query 1852281 T---CTTGACCACCTGAGCGGCGGCCTTTTGCGC--CGTGCCG-GTGCGCACGTGCGCCG 1852334 ||| |||||| ||| | || || | || | ||| | ||| |||| | | Sbjct 43613109 CTTGCTTTGCCACCTCAGCTCCAGCTTTCTTGGCATCATGCTGTGTGACCACG---GAAG 43613053 Query 1852335 CGAGTCGGTAGAGGTCGAGCGCGTAGGCGCCGCCGCACTGGTACTCGGTGCCGCGCACAA 1852394 ||| ||||||| || |||| ||| | || | |||||| || ||||| | | Sbjct 43613052 AGAGGCGGTAGACATCCAGCGTGTACTCTTTGCTGAGCTGGTAATCAGTGCCTTTGATGA 43612993 Query 1852395 ACTCGAG-TCCGCCCAGCGGCACGCCGATGTGCTGGAGCATGGCCTTGATGGCAAACTCG 1852453 ||| ||| | | || || ||||| || ||| || ||||| |||||||| || ||| Sbjct 43612992 ACTTGAGCTTCTCCAAG-GGCACCCCAATGCTCTCCAGCATTGCCTTGATCACATTCTCA 43612934 Query 1852454 TACCAGCGGCACCGGTGTTCGACCAGGTCCCACGGCGTCTTGCCGTTGTCGAGGTGGGCG 1852513 || ||| | | |||| | || |||||||| | ||| ||| || |||| ||| Sbjct 43612933 TAATAGCTGGTTCAAAGTTCTAGAAGTTCCCACGGAGCCTTCATGTTATCCAGGTATGCG 43612874 Query 1852514 TGCACGTCGGCAAAGAGGATCTTGACCCGACAGCCGGCCTGGAGAAAGTCGGCCAGTTTG 1852573 |||| ||| ||||| || || | ||| ||| || || | || ||||| | | || Sbjct 43612873 TGCAGGTCCGCAAACAGAATTGTTACCTCACATCCTGCTTTCAGGAAGTCTGTGATCTTA 43612814 Query 1852574 AAGATGGGCACAAAGTAGCCTAGGTGCGGGTTGCCCGTCGGCGCCGTGCCCCAATA 1852629 | |||||||||||||| | | || || ||||| || | || || ||||| || Sbjct 43612813 GACATGGGCACAAAGTAAGCCACATGTGGCTTGCCTGTAGTTGCTGTCCCCCAGTA 43612758 >seq1 Length=157403528 Score = 89.7 bits (98), Expect = 6e-12 Identities = 105/138 (76%), Gaps = 3/138 (2%) Strand=Plus/Minus Query 1254423 TGCGCCAGACGGCCGGCCTCGG-TGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1254481 || ||||| | | || ||||| |||| | || || | || ||||| ||||||||||| Sbjct 21027783 TGGGCCAGCCAGGCGCCCTCGCCTGCC-AGCCGCTCAAACACATCGTTCACAAACGAGTT 21027725 Query 1254482 CATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1254541 ||||| ||| | |||| |||||||| | | ||||||||||||||| |||||||| Sbjct 21027724 CATGAAGCTCATGGCCTTGGAGGAGATGCTGATTT-GGGGTGCACCTGCTTCAGCACCTT 21027666 Query 1254542 GTAGATGAACGACGAGTA 1254559 ||||||| || |||||| Sbjct 21027665 GTAGATGTACATCGAGTA 21027648 Score = 87.8 bits (96), Expect = 2e-11 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 1592165 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTT 1592224 || ||||||||| | || | || || |||||| | |||||||| | |||| || || Sbjct 86008893 ACACTCTTTGAGCTTATATTGGCAGCAAACTACTTAGACATCAAAGGTTTGCTTGACGTT 86008834 Query 1592225 GGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACC 1592284 |||||| |||| || || |||||||||||||| | || |||||||| || ||||| Sbjct 86008833 ACCTGCAAGACTGTTGCTAATATGATCAAGGGCAAAACTCCTGAGGAGATTCGAAAGACA 86008774 Query 1592285 TTTAACATCAA 1592295 || || ||||| Sbjct 86008773 TTCAATATCAA 86008763 >seq20 Length=71784255 Score = 87.8 bits (96), Expect = 2e-11 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 1592165 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTT 1592224 || ||||||||| | || | || || |||||| | |||||||| | |||| || || Sbjct 59021853 ACACTCTTTGAGCTTATATTGGCAGCAAACTACTTAGACATCAAAGGTTTGCTTGACGTT 59021794 Query 1592225 GGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACC 1592284 |||||| |||| || || |||||||||||||| | || |||||||| || ||||| Sbjct 59021793 ACCTGCAAGACTGTTGCTAATATGATCAAGGGCAAAACTCCTGAGGAGATTCGAAAGACA 59021734 Query 1592285 TTTAACATCAA 1592295 || || ||||| Sbjct 59021733 TTCAATATCAA 59021723 >seq15 Length=81904557 Score = 87.8 bits (96), Expect = 2e-11 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 1592165 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTT 1592224 || ||||||||| | || | || || |||||| | |||||||| | |||| || || Sbjct 27121380 ACACTCTTTGAGCTTATATTGGCAGCAAACTACTTAGACATCAAAGGTTTGCTTGACGTT 27121439 Query 1592225 GGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACC 1592284 |||||| |||| || || |||||||||||||| | || |||||||| || ||||| Sbjct 27121440 ACCTGCAAGACTGTTGCTAATATGATCAAGGGCAAAACTCCTGAGGAGATTCGAAAGACA 27121499 Query 1592285 TTTAACATCAA 1592295 || || ||||| Sbjct 27121500 TTCAATATCAA 27121510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6104684891525519