Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capra_20hircus_20[refseq_20GCF_5F001704415.1_202016-08-24] 29,907 sequences; 2,922,813,246 total letters Query= NC_022563.1 Length=148803 Score E Sequences producing significant alignments: (Bits) Value seq19 89.7 5e-13 >seq19 Length=62516450 Score = 89.7 bits (98), Expect = 5e-13 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 43867 TCCGCTGGAAGGTGCCGTCGAGGGCGGCCACGATGACGATCTTCCCCGCGTTCGCCATGT 43926 ||| ||| ||||| || || || || |||||||||||| ||||||||| ||| ||||||| Sbjct 53191456 TCCTCTGAAAGGTCCCATCCAGCGCAGCCACGATGACGGTCTTCCCCGAGTTGGCCATGT 53191397 Query 43927 CCTCGCAGAACTCCACTAGGTC 43948 ||||||||||||||| | ||| Sbjct 53191396 TCTCGCAGAACTCCACAATGTC 53191375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475863637798360