Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capra_20hircus_20[refseq_20GCF_5F001704415.1_202016-08-24] 29,907 sequences; 2,922,813,246 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq3 149 9e-30 seq23 143 4e-28 seq14303 127 3e-23 seq31 86.0 9e-11 >seq3 Length=120038259 Score = 149 bits (164), Expect = 9e-30 Identities = 170/229 (74%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||| | |||||||||||||| |||| | | ||| ||| ||||| Sbjct 99442854 TACAAGGTGTTGAAGCAGGTGCACCCAGACACCGGTATTTCGTCC------AAGGCCATG 99442801 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| |||||||||||||| |||| ||||||| ||| || ||| Sbjct 99442800 GGCATCATGAACTCATTTGTCAACGACATCTTCGAGCGCATCGCGGGCGAAGCGTCGCGC 99442741 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 |||||| | |||||||||| || ||| | || ||||||||||| ||||||||| Sbjct 99442740 TTGGCGCATTACAACAAGCGCTCAACCATCACGTCTCGGGAGATCCAGACGGCCGTGCGC 99442681 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| ||||| ||||||| ||| ||||| ||||||||||||| Sbjct 99442680 CTGCTGCTGCCTGGCGAGCTGGCCAAGCATGCCGTGTCCGAGGGCACCA 99442632 Score = 134 bits (148), Expect = 2e-25 Identities = 168/229 (73%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||| ||| | |||||||||||||| |||| |||| || |||| ||||| Sbjct 99406208 TACAAAGTGTTGAAGCAGGTGCACCCGGACACCGG-----CATC-TCGTCCAAGGCCATG 99406261 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| |||||||||||||| |||| ||||||| ||| || ||| Sbjct 99406262 GGCATCATGAACTCATTTGTCAACGACATCTTCGAGCGCATCGCGGGCGAAGCGTCGCGC 99406321 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 |||| | | |||||||||| || ||| | || |||| ||| || ||||||||| Sbjct 99406322 TTGGCCCATTACAACAAGCGCTCGACCATCACGTCCCGGGAGACCCAAACGGCCGTGCGC 99406381 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| |||||| || |||| ||||||||| |||||||||| || Sbjct 99406382 CTGCTGCTGCCCGGCGAGCTAGCCAAGCACGCCGTGTCCGAGGGCAGCA 99406430 Score = 134 bits (148), Expect = 2e-25 Identities = 168/229 (73%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||| ||| | |||||||||||||| |||| |||| || |||| ||||| Sbjct 99420719 TACAAAGTGTTGAAGCAGGTGCACCCGGACACCGG-----CATC-TCGTCCAAGGCCATG 99420666 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| |||||||||||||| |||| ||||||| ||| || ||| Sbjct 99420665 GGCATCATGAACTCATTTGTCAACGACATCTTCGAGCGCATCGCGGGCGAAGCGTCGCGC 99420606 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 |||| | | |||||||||| || ||| | || |||| ||| || ||||||||| Sbjct 99420605 TTGGCCCATTACAACAAGCGCTCGACCATCACGTCCCGGGAGACCCAAACGGCCGTGCGC 99420546 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| |||||| || |||| ||||||||| |||||||||| || Sbjct 99420545 CTGCTGCTGCCCGGCGAGCTAGCCAAGCACGCCGTGTCCGAGGGCAGCA 99420497 Score = 129 bits (142), Expect = 8e-24 Identities = 169/231 (73%), Gaps = 10/231 (4%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 || |||||||| || ||||||||||| |||| |||| || |||| ||||| Sbjct 99384527 TATAAGGTGCTGAAACAGGTGCACCCGGACACCGG-----CATC-TCGTCCAAGGCCATG 99384474 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||| || || ||||| ||||| |||| ||||| | | ||| || ||||| Sbjct 99384473 GGCATCATGAATTCCTTCGTCAATGACATCTTCGAGCGCATTGCCGGCGAAGC--GTCGC 99384416 Query 725034 --CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGC 725091 ||||||| | |||||||||| || || | || ||||||||||| || |||| Sbjct 99384415 GTCTGGCGCATTACAACAAGCGCTCAACCATTACTTCTCGAGAGATCCAGACGGCGGTGC 99384356 Query 725092 GCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||||| | | | ||| || ||||||| ||||||||| ||||||||||||| Sbjct 99384355 GCCTGCTGCTTCCCGGTGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 99384305 >seq23 Length=48866549 Score = 143 bits (158), Expect = 4e-28 Identities = 170/229 (74%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||| || ||||| |||| |||| || |||| ||||| Sbjct 18602066 TACAAGGTGCTGAAGCAAGTCCACCCGGACACCGG-----CATC-TCGTCCAAGGCCATG 18602013 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| ||||| |||||||| |||| ||||||| |||||| |||| Sbjct 18602012 GGTATCATGAACTCCTTTGTAAACGACATTTTCGAGCGCATCGCGGGCGAGGCATCTCGC 18601953 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| | |||||||||| || ||| | | ||||||||||| ||||||||| Sbjct 18601952 CTGGCGCATTACAACAAGCGCTCGACCATCACATCCAGGGAGATCCAGACGGCCGTGCGC 18601893 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| || || ||||||| |||||| || || |||||||||| Sbjct 18601892 CTGCTGCTGCCTGGGGAGCTGGCCAAGCACGCGGTGTCTGAGGGCACCA 18601844 Score = 140 bits (154), Expect = 5e-27 Identities = 169/229 (74%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||| ||||| |||| |||| || |||| ||||| Sbjct 18279289 TACAAGGTGCTGAAGCAGGTCCACCCGGACACCGG-----CATC-TCGTCCAAGGCCATG 18279342 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| |||||||||||||| |||| ||||||| |||||| |||| Sbjct 18279343 GGCATCATGAACTCTTTTGTCAACGACATCTTCGAGCGCATCGCTGGCGAGGCGTCTCGC 18279402 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| | |||||||||| || ||| | | ||||||||||| || || ||| Sbjct 18279403 CTGGCGCATTACAACAAGCGCTCGACTATCACATCCAGGGAGATCCAGACAGCGGTACGC 18279462 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | | | ||| || ||||||| |||||| || || ||||| |||| Sbjct 18279463 CTGCTGCTACCCGGGGAGCTGGCCAAGCACGCGGTGTCTGAGGGTACCA 18279511 Score = 134 bits (148), Expect = 2e-25 Identities = 168/229 (73%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||| ||||| |||||||| ||||| |||| |||| || |||| ||||| Sbjct 18611852 TACAAAGTGCTGAAGCAGGTCCACCCGGACACCGG-----CATC-TCGTCCAAGGCCATG 18611799 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || || ||||| || |||| ||||||| |||||| || Sbjct 18611798 GGTATCATGAACTCCTTCGTGAACGATATCTTCGAGCGCATCGCGGGCGAGGCATCGCGT 18611739 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| || ||| | | ||||||||||| ||||||||| Sbjct 18611738 CTGGCGCACTACAACAAGCGCTCGACCATCACATCCAGGGAGATCCAGACGGCCGTGCGC 18611679 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| || || ||||||| ||||||||| || |||||||||| Sbjct 18611678 CTGCTGCTGCCTGGGGAGCTGGCCAAGCACGCCGTGTCTGAGGGCACCA 18611630 Score = 134 bits (148), Expect = 2e-25 Identities = 168/229 (73%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||| ||||| |||| |||| || |||| ||||| Sbjct 18969787 TACAAGGTGCTGAAGCAGGTCCACCCGGACACCGG-----CATC-TCGTCCAAGGCCATG 18969840 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||| ||||| || |||||||| |||| ||||||| |||||| ||| Sbjct 18969841 GGCATCATGAATTCGTTCGTGAACGACATTTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 18969900 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||| | | |||||||||| || ||| | | ||||||||||| ||||||||| Sbjct 18969901 CTGGCTCATTACAACAAGCGCTCGACCATCACATCCAGGGAGATCCAGACGGCCGTGCGC 18969960 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | | | ||| || ||||||| ||||||||| || |||||||||| Sbjct 18969961 CTCCTGCTTCCCGGAGAGCTGGCCAAGCACGCCGTGTCTGAGGGCACCA 18970009 Score = 134 bits (148), Expect = 2e-25 Identities = 168/229 (73%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||| ||||| |||| |||| || |||| ||||| Sbjct 18978558 TACAAGGTGCTGAAGCAGGTCCACCCGGACACCGG-----CATC-TCGTCCAAGGCCATG 18978505 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||| ||||| |||||||| || | || ||||||| |||||| ||| Sbjct 18978504 GGCATCATGAATTCGTTCGTCAACGATATTTTTGAGCGCATCGCGGGCGAGGCATCGCGC 18978445 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||| | | |||||||||| || ||| | | ||||||||||| ||||||||| Sbjct 18978444 CTGGCTCATTACAACAAGCGCTCGACCATCACATCCAGGGAGATCCAGACGGCCGTGCGC 18978385 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | | | ||| |||||||| | ||||||||| || |||||||||| Sbjct 18978384 CTGCTGCTTCCCGGAGAACTGGCGAAGCACGCCGTGTCTGAGGGCACCA 18978336 Score = 131 bits (144), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||| |||||| || || |||| || |||| ||||| Sbjct 18204280 TACAAGGTGCTGAAGCAGGTCCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 18204333 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||| ||||| || || || || |||| ||||||| |||||| ||| Sbjct 18204334 GGCATCATGAATTCGTTCGTGAATGATATTTTCGAGCGCATCGCTGGCGAGGCATCGCGC 18204393 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||| | | ||||||||| || ||| | | ||||||||||||||||| ||| Sbjct 18204394 CTGGCCCATTACAACAAGCGTTCAACCATCACATCCAGGGAGATCCAGACCGCCGTTCGC 18204453 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| ||| || ||||||| ||||||||| || ||||| |||| Sbjct 18204454 CTGCTGTTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCGGAGGGTACCA 18204502 Score = 131 bits (144), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||| ||||| || ||| |||||||| | ||||| Sbjct 18266790 TACAAGGTGCTGAAGCAGGTCCACCCGGACAC---TGGAATCTCCTCCAA---GGCCATG 18266843 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || || ||||| || | || ||||||| |||||| || Sbjct 18266844 GGCATCATGAACTCCTTCGTGAACGATATATTTGAGCGCATCGCAGGCGAGGCATCGCGT 18266903 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| | ||||||||| || ||| | | ||||||||||||||||||||| Sbjct 18266904 CTGGCGCATTATAACAAGCGCTCGACCATCACATCCAGGGAGATCCAGACCGCCGTGCGC 18266963 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | ||| || || ||||||| ||||||||| ||||||||||||| Sbjct 18266964 CTTCTGTTGCCTGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 18267012 Score = 131 bits (144), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||| ||||| |||| |||| || |||| ||||| Sbjct 18950447 TACAAGGTGCTGAAGCAGGTCCACCCGGACACCGG-----CATC-TCGTCCAAGGCCATG 18950500 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||| || || ||||||||||| |||| ||||||| |||||| ||| Sbjct 18950501 GGCATCATGAATTCCTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 18950560 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||| | | |||||||||| || ||| | | ||||||||||| |||||||| Sbjct 18950561 CTGGCTCATTACAACAAGCGCTCGACCATCACATCCAGGGAGATCCAGACGGCCGTGCGT 18950620 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | ||| || || ||||| | ||||||||| ||||||||||||| Sbjct 18950621 CTTCTGCTGCCTGGGGAGCTGGCTAAGCACGCCGTGTCCGAGGGCACCA 18950669 Score = 129 bits (142), Expect = 8e-24 Identities = 169/231 (73%), Gaps = 10/231 (4%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||| ||||| |||| |||| || |||| ||||| Sbjct 18187897 TACAAGGTGCTGAAGCAGGTCCACCCGGACACCGG-----CATC-TCGTCCAAGGCCATG 18187950 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||| || |||||||||||||| |||| ||||||| ||||| ||||| Sbjct 18187951 GGCATCATGAATTCATTTGTCAACGACATCTTCGAGCGCATCGCGGGTGAGGC--GTCGC 18188008 Query 725034 --CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGC 725091 ||||||| | |||||||||| || ||| | | ||||||||||| ||||| | Sbjct 18188009 GTCTGGCGCATTACAACAAGCGCTCGACTATCACATCCAGGGAGATCCAGACGGCCGTAC 18188068 Query 725092 GCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 |||| | ||| || || |||||| |||||||| ||||||||||||| Sbjct 18188069 GCCTACTGTTGCCTGGGGAGTTGGCCAAACACGCCGTGTCCGAGGGCACCA 18188119 Score = 127 bits (140), Expect = 3e-23 Identities = 165/227 (73%), Gaps = 6/227 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||| ||||| |||| |||| || |||| ||||| Sbjct 18994209 TACAAGGTGCTGAAGCAGGTCCACCCGGACACCGG-----CATC-TCGTCCAAGGCCATG 18994262 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||| ||||| || ||||| || |||| ||||||| |||||| ||| Sbjct 18994263 GGCATCATGAATTCGTTCGTGAACGATATTTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 18994322 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||| | | |||||||||| || ||| | | ||||||||||| || |||||| Sbjct 18994323 CTGGCTCATTACAACAAGCGCTCGACCATCACATCCAGGGAGATCCAGACGGCTGTGCGC 18994382 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 ||| | ||| ||| || |||||| ||||||||| || |||||||| Sbjct 18994383 CTGCTGCTGCCCGGGGAGTTGGCCAAGCACGCCGTGTCTGAGGGCAC 18994429 Score = 125 bits (138), Expect = 1e-22 Identities = 166/229 (72%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||| ||||| |||| |||| || ||| ||||| Sbjct 18943211 TACAAGGTGCTGAAGCAGGTCCACCCGGACACCGG-----CATC-TCGTCTAAGGCCATG 18943158 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||| || || ||||||||||| |||| ||||||| |||||| ||| Sbjct 18943157 GGCATCATGAATTCCTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 18943098 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||| | | |||||||||| || ||| | | ||||||||||| |||||||| Sbjct 18943097 CTGGCTCATTACAACAAGCGCTCGACCATCACATCCAGGGAGATCCAGACGGCCGTGCGT 18943038 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | ||| || || ||||| | ||||||||| ||||||||||||| Sbjct 18943037 CTTCTGCTGCCTGGGGAGCTGGCTAAGCACGCCGTGTCCGAGGGCACCA 18942989 Score = 118 bits (130), Expect = 2e-20 Identities = 133/178 (75%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 724965 AAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAG 725024 ||| ||||| ||||||||||| ||||| |||||||| |||| ||||||| |||| Sbjct 18098439 AAGGCCATGGGTATCATGAACTCCTTTGTGAACGACATTTTCGAGCGCATCGCGGGCGAG 18098380 Query 725025 GCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACC 725084 || |||||||||| | ||||||||| || ||| | | ||||||||||| Sbjct 18098379 GCGTCACGCCTGGCGCATTACAACAAGCGTTCGACCATCACATCCAGGGAGATCCAGACG 18098320 Query 725085 GCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 |||||||||||| | ||| ||| || ||||||| ||| || || || ||||| |||| Sbjct 18098319 GCCGTGCGCCTGTTGCTGCCCGGGGAGCTGGCCAAGCATGCTGTGTCTGAGGGTACCA 18098262 Score = 118 bits (130), Expect = 2e-20 Identities = 163/227 (72%), Gaps = 6/227 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| || || || || || |||| | ||| || |||| ||||| Sbjct 18219016 TACAAGGTGCTGAAACAAGTCCATCCGGACACCGGT-----ATC-TCGTCCAAGGCCATG 18219069 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| |||||||| ||||| | || ||||||| |||||| |||| Sbjct 18219070 GGCATCATGAACTCTTTTGTCAATGACATCTTTGAGCGCATCGCGGGCGAGGCGTCTCGC 18219129 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||| | | |||||||||| || || | | ||||||||||||||||||||| Sbjct 18219130 CTGGCACATTACAACAAGCGCTCGACCATTACATCCAGGGAGATCCAGACCGCCGTGCGC 18219189 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 || | ||| ||| || ||||||| ||| || || || |||||||| Sbjct 18219190 CTACTGCTGCCCGGGGAGCTGGCCAAGCATGCGGTGTCTGAGGGCAC 18219236 Score = 116 bits (128), Expect = 5e-20 Identities = 167/233 (72%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATC-CTCCAACAAGTC 724969 |||||||||||||| ||||| || ||||| ||| | |||| || || ||| | Sbjct 17832503 ATCTACAAGGTGCTGAAGCAAGTTCACCCAGATACC-----GGCATCTCTTCA--AAGGC 17832451 Query 724970 CATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGG 725029 |||| |||||||| |||||||||| ||||| |||| ||||||| |||||| Sbjct 17832450 CATGAGCATCATGAATTCGTTTGTCAGTGACATTTTCGAGCGCATCGCAGGCGAGGCGTC 17832391 Query 725030 TCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGT 725089 |||||||| | | ||||||||| ||| ||| | | || ||||| || || || Sbjct 17832390 GCGCCTGGCACATTATAACAAGCGCTCCACTATCACGTCCAGGGAAATCCAAACGGCTGT 17832331 Query 725090 GCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 |||||| | ||| || || ||||||| |||||| || || |||||||||| Sbjct 17832330 ACGCCTGCTGCTGCCTGGGGAGCTGGCCAAGCACGCGGTGTCTGAGGGCACCA 17832278 Score = 116 bits (128), Expect = 5e-20 Identities = 164/229 (72%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||| ||||| |||| |||| || |||| ||||| Sbjct 18154581 TACAAGGTGCTGAAGCAGGTCCACCCGGACACCGG-----CATC-TCGTCCAAGGCCATG 18154528 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||| || || ||||||||||| |||| || || | |||||| ||| Sbjct 18154527 GGCATCATGAATTCCTTCGTCAACGACATCTTCGAGCGTATTGCGGGCGAGGCATCGCGC 18154468 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 || |||| | |||||||||| || ||| | | ||||||||||| ||||||||| Sbjct 18154467 CTTGCGCATTACAACAAGCGCTCGACCATCACATCCAGGGAGATCCAGACGGCCGTGCGC 18154408 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| || || |||||| || ||||| |||||||| |||| Sbjct 18154407 CTGCTGTTGCCTGGGGAGTTGGCCAAACATGCCGTGTCCGAGGGTACCA 18154359 Score = 113 bits (124), Expect = 6e-19 Identities = 163/229 (71%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||| || || || |||| |||| || |||| | ||| Sbjct 18225358 TACAAGGTGCTGAAGCAAGTCCATCCGGACACCGG-----CATC-TCATCCAAGGCTATG 18225305 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||||||||| |||| ||||||| ||||| ||| Sbjct 18225304 GGCATCATGAACTCCTTCGTCAACGACATTTTCGAGCGCATCGCTGGTGAGGCATCGCGC 18225245 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 |||| | | ||||||||| || || | | ||||||||||| || |||||| Sbjct 18225244 TTGGCTCATTATAACAAGCGCTCGACTATTACATCCAGAGAGATCCAGACTGCTGTGCGC 18225185 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| || || ||||||| ||||||||||||||| ||||||| Sbjct 18225184 CTGCTGCTGCCTGGGGAGCTGGCCAAGCACGCCGTCTCCGAAGGCACCA 18225136 >seq14303 Length=5897 Score = 127 bits (140), Expect = 3e-23 Identities = 167/229 (73%), Gaps = 7/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||| ||||| |||| |||| || ||| ||||| Sbjct 1577 TACAAGGTGCTGAAGCAGGTCCACCCGGACACCGG-----CATC-TCGTCTAAGGCCATG 1630 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 | |||||||| || || ||||||||||| |||| ||||||| |||||| ||| Sbjct 1631 GC-ATCATGAATTCCTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 1689 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||| | | |||||||||| || ||| | | ||||||||||| |||||||| Sbjct 1690 CTGGCTCATTACAACAAGCGCTCGACCATCACATCCAGGGAGATCCAGACGGCCGTGCGT 1749 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | ||| || || ||||| | ||||||||| ||||||||||||| Sbjct 1750 CTTCTGCTGCCTGGGGAGCTGGCTAAGCACGCCGTGTCCGAGGGCACCA 1798 >seq31 Length=49932331 Score = 86.0 bits (94), Expect = 9e-11 Identities = 118/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 724978 TCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCTGG 725037 ||||| | ||||| || || || ||| | || | |||| | |||||||| |||||| Sbjct 37690023 TCATGGATTCGTTCGTGAAGGATATGTTTGAGCAGATCGCCGAAGAGGCCGGGAGCCTGG 37689964 Query 725038 CGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTGA 725097 | ||||||||||||| | ||| ||| | | ||||||||||| |||||| | || Sbjct 37689963 CCCGCTCCAACAAGCACTGCACCATCACGAGTGGGGAGATCCAGACAGCCGTGAGTCTTC 37689904 Query 725098 TCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || ||| || || | | || | |||| || ||||||| ||||| Sbjct 37689903 TCCTGCCTGGGGAGATCGGCAAGTACGCAGTGTCCGAGGCCACCA 37689859 Score = 86.0 bits (94), Expect = 9e-11 Identities = 118/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 724978 TCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCTGG 725037 ||||| | ||||| || || || ||| | || | |||| | |||||||| |||||| Sbjct 37723618 TCATGGATTCGTTCGTGAAGGATATGTTTGAGCAGATCGCCGAAGAGGCCGGGAGCCTGG 37723559 Query 725038 CGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTGA 725097 | ||||||||||||| | ||| ||| | | ||||||||||| |||||| | || Sbjct 37723558 CCCGCTCCAACAAGCACTGCACCATCACGAGTGGGGAGATCCAGACAGCCGTGAGTCTTC 37723499 Query 725098 TCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || ||| || || | | || | |||| || ||||||| ||||| Sbjct 37723498 TCCTGCCTGGGGAGATCGGCAAGTACGCAGTGTCCGAGGCCACCA 37723454 Score = 86.0 bits (94), Expect = 9e-11 Identities = 118/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 724978 TCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCTGG 725037 ||||| | ||||| || || || ||| | || | |||| | |||||||| |||||| Sbjct 37992026 TCATGGATTCGTTCGTGAAGGATATGTTTGAGCAGATCGCCGAAGAGGCCGGGAGCCTGG 37991967 Query 725038 CGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTGA 725097 | ||||||||||||| | ||| ||| | | ||||||||||| |||||| | || Sbjct 37991966 CCCGCTCCAACAAGCACTGCACCATCACGAGTGGGGAGATCCAGACAGCCGTGAGTCTTC 37991907 Query 725098 TCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || ||| || || | | || | |||| || ||||||| ||||| Sbjct 37991906 TCTTGCCTGGGGAGATCGGCAAGTACGCAGTGTCCGAGGCCACCA 37991862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7174926614880934