Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capra_20hircus_20[refseq_20GCF_5F001704415.1_202016-08-24] 29,907 sequences; 2,922,813,246 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq18 176 5e-39 seq26 152 6e-32 seq19 149 7e-31 seq17 140 4e-28 seq3 123 3e-23 seq1 113 5e-20 seq2 111 2e-19 seq11 104 3e-17 seq7 89.7 6e-13 >seq18 Length=67275902 Score = 176 bits (194), Expect = 5e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || ||||| || || || ||||| || ||||||||||| ||| | Sbjct 38084102 ATGCAGATTTTCGTGAAGACCCTAACGGGGAAGACCATCACTCTTGAGGTCGAGCCCTCG 38084043 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | |||| | ||||| || || ||||| ||||| ||||||||||| |||||| Sbjct 38084042 GATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGACCAG 38083983 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | || || |||||||| |||||||| || |||| ||||| | | ||||| || Sbjct 38083982 CAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAAC 38083923 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||||||| ||||||||||||||||| ||| | ||||| ||||| Sbjct 38083922 ATTCAAAAGGAGTCCACTCTTCATCTAGTGTTGAGACTTCGTGGTGG 38083876 >seq26 Length=51421553 Score = 152 bits (168), Expect = 6e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27407 TGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTG 27466 |||| || || | ||||| || || || ||||| | ||||||||||| ||| | | Sbjct 9313013 TGCAGATTTTCATGAAGACCCTGACAGGGAAGACCACCACTCTTGAGGTCGAGCCCTCGG 9312954 Query 27467 ATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGC 27526 ||| | | |||| | ||||| || || ||||| ||||| ||||||||||| ||||||| Sbjct 9312953 ATACAACAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGACCAGC 9312894 Query 27527 AGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATG 27586 | | || || |||| ||| |||||||| || |||| |||| | | ||||| || Sbjct 9312893 AAAGACTGATCTTTGTTGGCAAGCAACTGGAAGATGGATGTACTTTGTCTGACTACAACA 9312834 Query 27587 TCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | |||||||| ||||||||||||||||| ||| | ||||| |||||| Sbjct 9312833 TTCAAAAGGAGTCCACTCTTCATCTAGTGTTGAGACTTCGTGGTGGA 9312787 >seq19 Length=62516450 Score = 149 bits (164), Expect = 7e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| || ||||||||||| || || || ||||| ||| | || Sbjct 32928349 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 32928290 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || ||||||| || || ||||| ||||| || ||||| || |||||| Sbjct 32928289 GACACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAGGAAGGCATTCCCCCTGACCAG 32928230 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || |||||||| ||||| || || |||| || || || | || || || Sbjct 32928229 CAGAGGCTCATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 32928170 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || || || || ||| | |||||| | ||||| Sbjct 32928169 ATCCAGAAGGAGTCGACCCTGCACCTGGTCCTTCGTCTTAGGGGTGG 32928123 Score = 145 bits (160), Expect = 9e-30 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||||||||| || ||||| || ||||||||||| || || || ||||| ||| | | Sbjct 32929034 AATGCAAATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAG 32928975 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | ||| | ||| ||||||| || || ||||| ||||| || ||||| || ||||| Sbjct 32928974 TGACACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAGGAAGGCATTCCCCCTGACCA 32928915 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||| | || || ||||| || ||||| || || |||| || || || | || || || Sbjct 32928914 GCAGAGGCTCATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAA 32928855 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || || || || || | ||||| | ||||| Sbjct 32928854 CATCCAGAAGGAGTCGACCCTGCACCTGGTTCTCCGTCTGAGGGGTGG 32928807 Score = 143 bits (158), Expect = 3e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| || ||||||||||| || || || ||||| ||| | || Sbjct 32928577 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTAGAGCCCAGT 32928518 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || ||||||| || || ||||| ||||| || ||||| || |||||| Sbjct 32928517 GACACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAGGAAGGCATTCCCCCTGACCAG 32928458 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || ||||| || ||||| || || |||| ||| || || | || || ||| Sbjct 32928457 CAGAGGCTCATCTTTGCCGGCAAGCAGCTGGAAGATGGTCGCACTCTTTCTGATTACAAT 32928398 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || || || || || | ||||| | ||||| Sbjct 32928397 ATCCAGAAGGAGTCGACCCTGCACCTGGTTCTCCGTCTGAGGGGTGG 32928351 Score = 134 bits (148), Expect = 2e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| || ||||||||||| || || || ||||| ||| | || Sbjct 32928805 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 32928746 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || ||||||| || || ||||| ||||| || ||||| || |||||| Sbjct 32928745 GACACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAGGAAGGCATTCCCCCTGACCAG 32928686 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || ||||| || ||||| || || |||| || || || | || || || Sbjct 32928685 CAGAGGCTCATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 32928626 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || || || || || | ||||| | ||||| Sbjct 32928625 ATCCAGAAGGAGTCGACCCTGCACCTGGTTCTCCGTCTGAGGGGTGG 32928579 >seq17 Length=71137785 Score = 140 bits (154), Expect = 4e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| | || |||||||| || || || ||||| ||| | || Sbjct 20310465 ATGCAGATCTTCGTGAAGACCTTGACGGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 20310406 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||||| || || || ||||| ||||| || || ||||||||| Sbjct 20310405 GACACCATCGAGAACGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGACCAG 20310346 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || ||||| || || || || ||||||| || ||||| | ||||| || Sbjct 20310345 CAGAGGCTGATCTTTGCCGGGAAACAGCTGGAGGATGGGCGCACCCTGTCTGACTACAAC 20310286 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| |||||||| || || ||| | || || | ||||| Sbjct 20310285 ATCCAGAAGGAGTCCACTCTGCACCTGGTCCTCCGCCTCAGAGGTGG 20310239 Score = 140 bits (154), Expect = 4e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| | || |||||||| || || || ||||| ||| | || Sbjct 20310693 ATGCAGATCTTCGTGAAGACCTTGACGGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 20310634 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||||| || || || ||||| ||||| || || ||||||||| Sbjct 20310633 GACACCATCGAGAACGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGACCAG 20310574 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || ||||| || || || || ||||||| || ||||| | ||||| || Sbjct 20310573 CAGAGGCTGATCTTTGCCGGGAAACAGCTGGAGGATGGGCGCACCCTGTCTGACTACAAC 20310514 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| |||||||| || || ||| | || || | ||||| Sbjct 20310513 ATCCAGAAGGAGTCCACTCTGCACCTGGTCCTCCGCCTCAGAGGTGG 20310467 Score = 140 bits (154), Expect = 4e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| | || |||||||| || || || ||||| ||| | || Sbjct 20310921 ATGCAGATCTTCGTGAAGACCTTGACGGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 20310862 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||||| || || || ||||| ||||| || || ||||||||| Sbjct 20310861 GACACCATCGAGAACGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGACCAG 20310802 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || ||||| || || || || ||||||| || ||||| | ||||| || Sbjct 20310801 CAGAGGCTGATCTTTGCCGGGAAACAGCTGGAGGATGGGCGCACCCTGTCTGACTACAAC 20310742 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| |||||||| || || ||| | || || | ||||| Sbjct 20310741 ATCCAGAAGGAGTCCACTCTGCACCTGGTCCTCCGCCTCAGAGGTGG 20310695 Score = 140 bits (154), Expect = 4e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| | || |||||||| || || || ||||| ||| | || Sbjct 20311149 ATGCAGATCTTCGTGAAGACCTTGACGGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 20311090 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||||| || || || ||||| ||||| || || ||||||||| Sbjct 20311089 GACACCATCGAGAACGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGACCAG 20311030 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || ||||| || || || || ||||||| || ||||| | ||||| || Sbjct 20311029 CAGAGGCTGATCTTTGCCGGGAAACAGCTGGAGGATGGGCGCACCCTGTCTGACTACAAC 20310970 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| |||||||| || || ||| | || || | ||||| Sbjct 20310969 ATCCAGAAGGAGTCCACTCTGCACCTGGTCCTCCGCCTCAGAGGTGG 20310923 Score = 140 bits (154), Expect = 4e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| | || |||||||| || || || ||||| ||| | || Sbjct 20311377 ATGCAGATCTTCGTGAAGACCTTGACGGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 20311318 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||||| || || || ||||| ||||| || || ||||||||| Sbjct 20311317 GACACCATCGAGAACGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGACCAG 20311258 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || ||||| || || || || ||||||| || ||||| | ||||| || Sbjct 20311257 CAGAGGCTGATCTTTGCCGGGAAACAGCTGGAGGATGGGCGCACCCTGTCTGACTACAAC 20311198 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| |||||||| || || ||| | || || | ||||| Sbjct 20311197 ATCCAGAAGGAGTCCACTCTGCACCTGGTCCTCCGCCTCAGAGGTGG 20311151 Score = 140 bits (154), Expect = 4e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| | || |||||||| || || || ||||| ||| | || Sbjct 20311605 ATGCAGATCTTCGTGAAGACCTTGACGGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 20311546 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||||| || || || ||||| ||||| || || ||||||||| Sbjct 20311545 GACACCATCGAGAACGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGACCAG 20311486 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || ||||| || || || || ||||||| || ||||| | ||||| || Sbjct 20311485 CAGAGGCTGATCTTTGCCGGGAAACAGCTGGAGGATGGGCGCACCCTGTCTGACTACAAC 20311426 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| |||||||| || || ||| | || || | ||||| Sbjct 20311425 ATCCAGAAGGAGTCCACTCTGCACCTGGTCCTCCGCCTCAGAGGTGG 20311379 Score = 140 bits (154), Expect = 4e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| | || |||||||| || || || ||||| ||| | || Sbjct 20311833 ATGCAGATCTTCGTGAAGACCTTGACGGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 20311774 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||||| || || || ||||| ||||| || || ||||||||| Sbjct 20311773 GACACCATCGAGAACGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGACCAG 20311714 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || ||||| || || || || ||||||| || ||||| | ||||| || Sbjct 20311713 CAGAGGCTGATCTTTGCCGGGAAACAGCTGGAGGATGGGCGCACCCTGTCTGACTACAAC 20311654 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| |||||||| || || ||| | || || | ||||| Sbjct 20311653 ATCCAGAAGGAGTCCACTCTGCACCTGGTCCTCCGCCTCAGAGGTGG 20311607 Score = 132 bits (146), Expect = 5e-26 Identities = 180/247 (73%), Gaps = 3/247 (1%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| | || |||||||| || || || ||||| ||| | || Sbjct 20310237 ATGCAGATCTTCGTGAAGACCTTGACGGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 20310178 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||||| || || || ||||| ||||| || || ||||||||| Sbjct 20310177 GACACCATCGAGAACGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGACCAG 20310118 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || ||||| || || || || || |||| || ||||| | ||||| || Sbjct 20310117 CAGAGGCTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAAC 20310058 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAAGTTTAAAGT 27645 |||| ||||| ||||| || || || ||| |||| ||| | || ||| |||| |||| Sbjct 20310057 ATCCAGAAGGAGTCCACCCTGCACCTGGTCCTGCG-CTT-GAGG-GGAGGTGTTTTAAGT 20310001 Query 27646 TTTTCCT 27652 | | ||| Sbjct 20310000 TCTCCCT 20309994 Score = 123 bits (136), Expect = 3e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| |||||||| ||||| || || || || || || ||||| ||||| ||| | | Sbjct 20312062 AATGCAGATCTTTGTAAAGACCCTCACTGGTAAAACCATCACTCTGGAGGTGGAGCCCAG 20312003 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | ||| | ||| | |||| || || || || || || || || || |||||||| Sbjct 20312002 TGACACCATCGAGAATGTCAAGGTGAAGATCCAAGAAAAAGAAGGCATCCCCCCAGACCA 20311943 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||| | | || ||||| || || || || || |||| || ||||| | ||||| || Sbjct 20311942 GCAGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAA 20311883 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || || |||||||| || || ||| | || || | ||||| Sbjct 20311882 CATCCAGAAAGAGTCCACTCTGCACCTGGTCCTCCGCCTCAGAGGTGG 20311835 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 4/227 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || ||||| || | || ||||| || |||| |||||| ||| | Sbjct 30373106 ATGCAGATTTTCGTGAAGACCCTGATGGGGAAGACCATCACTCCTGAGGTCGAGCCCTCA 30373047 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 ||| ||| | |||| | |||| || | |||| ||||| ||| |||||| |||||| Sbjct 30373046 GATCCCATAGAAAATGTAAAGGTCAAGGTCCAGGGTAAGGAAGGAGCTCCTCCTGACCAG 30372987 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | || || |||||||| |||||||| | |||| ||| | | ||||| || Sbjct 30372986 CAAAGACTGATCTTTGCTGGCAAGCAACTGAAAGATG----TACTTTGTCTGACTACAAC 30372931 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||||||| |||||||||||||| | ||| | |||| ||||| Sbjct 30372930 ATTCAAAAGGAGTCCACTCTTCATCTTTTGTTGAGACTTCATGGTGG 30372884 >seq3 Length=120038259 Score = 123 bits (136), Expect = 3e-23 Identities = 165/228 (72%), Gaps = 1/228 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTT-ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||| || ||||| ||||| | | || || ||||| || ||||| |||| ||| | Sbjct 100094183 ATGCAGATTTTTGTGAAGACTCCTGACAGGGAAGACCATCACTCTCAAGGTCGAGCCCTC 100094124 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 |||| || | | || | | || || || ||||| ||||| ||||||||||| ||||| Sbjct 100094123 GGATACAATAGAAGATGTAATGGTCAAGATCCAGGATAAGGAAGGAATTCCTCCTGACCA 100094064 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||| | || || |||||||| ||||| | || |||| | | | | | ||||| || Sbjct 100094063 GCAAAGACTGATCTTTGCTGGCAAGCACGTGGAAGATGGACATGCTTTGTCTGACTACAA 100094004 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||||||| |||||||||||| |||| ||| | ||| | ||||| Sbjct 100094003 CATTCAAAAGGAGTCCACTCTTCATTTAGTGTTGAGACTTTGTGGTGG 100093956 >seq1 Length=157403528 Score = 113 bits (124), Expect = 5e-20 Identities = 160/225 (71%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || | ||||| || || | ||||| || ||||||||||| || | Sbjct 45884927 ATGCAGATTTTCATGAAGACCCTGACAGTGAAGACCATCACTCTTGAGGTCAAGCCCTCG 45884868 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | |||| | ||||| || || |||| ||||| |||||| ||| ||||| Sbjct 45884867 GATACAATAGTAAATGTAAAGGCCAAGATCCAGGGTAAGGAACGAATTCTTCCTGACCAC 45884808 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | || || |||||||| |||||||| || |||| |||| | ||||| || Sbjct 45884807 CAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGATGTACTTTGTTTGACTACAAC 45884748 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGT 27630 | |||||||| ||||||||| ||| || ||| | ||| | ||| Sbjct 45884747 ATTCAAAAGGAGCCCACTCTTCCTCTTGTGTTGAGACTTTGTGGT 45884703 >seq2 Length=136510947 Score = 111 bits (122), Expect = 2e-19 Identities = 136/186 (73%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| || | |||||||| ||||| |||||||| ||| | || Sbjct 39540477 ATGCAGATCTTTGTGAAGACCCTGATGGGCAAGACCATTACCCTTGAGGTCGAGCCCAGT 39540418 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || || ||| | || || ||||| | ||||||||||| || || || ||||| Sbjct 39540417 GACACCACTGAGAATGTCAAAGCCAAAATCCGAGACAAGGAGGGCATCCCGCCTGACCAA 39540358 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||| ||| ||||| || || | || || ||| ||| | || | |||| || ||| Sbjct 39540357 CAGCATCTGATTTTCGCAGGCACACAGCTGGAGAATGGCTGCACTCCGTCAGAATACAAT 39540298 Query 27586 GTCCAA 27591 ||||| Sbjct 39540297 ATCCAA 39540292 >seq11 Length=106225002 Score = 104 bits (114), Expect = 3e-17 Identities = 164/234 (70%), Gaps = 1/234 (0%) Strand=Plus/Minus Query 27400 ACTATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAG 27459 || || ||||| || || || ||||| | || || |||| || |||| |||| || Sbjct 47457573 ACCATGATGCAGATTTTCGTGAAGACCTTGACAGGGAAGAGCATCTCTCTCAAGGTCAAG 47457514 Query 27460 TCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCA 27519 | |||| || | |||| | ||||| || || ||||| ||||| || ||||||| Sbjct 47457513 CCCTTGGATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGTGTTCCTCCT 47457454 Query 27520 GACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGAC 27579 |||||||| | || || ||||||| || ||||| || |||| || | || || Sbjct 47457453 GACCAGCAAAGACTGATCGTTGCTGGCAAACAACTGGAAGATGGATGTCTTTGACCA-AC 47457395 Query 27580 TATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 || || | |||||||| |||||||||||||| || || | | ||| |||||| Sbjct 47457394 TACAACATTCAAAAGGAGTCCACTCTTCATCTTGTGCTGAGACGTCGTGGTGGA 47457341 >seq7 Length=108433636 Score = 89.7 bits (98), Expect = 6e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| || || |||||||| || || |||||||| ||| | || Sbjct 104141105 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGCCCAGT 104141164 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509 |||| |||| ||| | || || ||||| || ||||||||||| Sbjct 104141165 GATACAATTGAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGG 104141208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570097196585840