Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capra_20hircus_20[refseq_20GCF_5F001704415.1_202016-08-24] 29,907 sequences; 2,922,813,246 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq18 185 2e-41 seq19 176 1e-38 seq26 159 8e-34 seq17 159 8e-34 seq3 154 3e-32 seq11 147 5e-30 seq1 136 9e-27 seq2 100 7e-16 >seq18 Length=67275902 Score = 185 bits (204), Expect = 2e-41 Identities = 176/225 (78%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||||||||| | || || |||||||||||||| ||||| ||||| || || | | || Sbjct 38083881 ACGAAGTCTCAACACTAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGT 38083940 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | |||||||||||| |||||||| || ||||| || | ||| ||||||||||||| ||| Sbjct 38083941 ACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCC 38084000 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||| ||||||||||| || || ||||| || || || ||| || ||||| || Sbjct 38084001 TTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGCTCGACCTCAAG 38084060 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 |||||| ||||| ||||| || ||||| || || | |||||| || Sbjct 38084061 AGTGATGGTCTTCCCCGTTAGGGTCTTCACGAAAATCTGCATCTT 38084105 Score = 102 bits (112), Expect = 2e-16 Identities = 151/212 (71%), Gaps = 3/212 (1%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||| |||||||||||| | ||||||| || || | ||||| |||||| Sbjct 6147485 AGGACCAAGTGCAGAGTGGACTCTCT--GGATGTTGTATTCAGACAGGGTGTGCCCATCT 6147428 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||| || ||||| ||||| || | || ||||| | || | || || ||||| Sbjct 6147427 TCCAGCTGTTTCCCTGCAAAGATCAGCCTCTGCTGGTCTAGGGGGATGCCCTCTTTGTCT 6147368 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || ||||||| |||| | || ||||| || | ||| ||| Sbjct 6147367 TGGATCTTGGCCTTGACATTCTCGATGGGGTCACTGGGCTCCACCTCCAGGGGGATGGTC 6147308 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || | || | ||| | || || | |||||| Sbjct 6147307 -TTACGGTCAAGGTCATCACGAAGATCTGCAT 6147277 >seq19 Length=62516450 Score = 176 bits (194), Expect = 1e-38 Identities = 166/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || || ||||| || |||||||| ||||| | ||| || | |||||| Sbjct 32928138 AGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 32928197 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| || ||||| || | || |||||||| |||| |||||||| ||| Sbjct 32928198 TCCAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTATCC 32928257 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| |||||||| |||||||||||| | || ||||| || ||||| ||| Sbjct 32928258 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 32928317 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| || || | |||||| Sbjct 32928318 TTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 32928349 Score = 170 bits (188), Expect = 4e-37 Identities = 165/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || || ||||| || |||||||| ||||| | ||| || | |||||| Sbjct 32928594 AGAACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 32928653 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| || ||||| || | || |||||||| |||| |||||||| ||| Sbjct 32928654 TCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTATCC 32928713 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| |||||||| |||||||||||| | || ||||| || ||||| ||| Sbjct 32928714 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 32928773 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| || || | |||||| Sbjct 32928774 TTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 32928805 Score = 167 bits (184), Expect = 5e-36 Identities = 164/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || || ||||| || ||||| || ||||| | ||| || | |||||| Sbjct 32928366 AGAACCAGGTGCAGGGTCGACTCCTTCTGGATATTGTAATCAGAAAGAGTGCGACCATCT 32928425 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| || ||||| || | || |||||||| |||| |||||||| ||| Sbjct 32928426 TCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTATCC 32928485 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| |||||||| |||||||||||| | || ||||| || ||||| ||| Sbjct 32928486 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCTACCTCCAGGGTGATGGTC 32928545 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| || || | |||||| Sbjct 32928546 TTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 32928577 Score = 167 bits (184), Expect = 5e-36 Identities = 166/215 (77%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || || ||||| || |||||||| ||||| | ||| || | |||||| Sbjct 32928822 AGAACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 32928881 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| || ||||| || | || |||||||| |||| |||||||| ||| Sbjct 32928882 TCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTATCC 32928941 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| ||||| || |||||||||||| | || ||||| || ||||| ||| Sbjct 32928942 TGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 32929001 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || || || || ||||| || || | |||||||| Sbjct 32929002 TTGCCGGTCAGGGTCTTCACGAAGATTTGCATTTT 32929036 >seq26 Length=51421553 Score = 159 bits (176), Expect = 8e-34 Identities = 168/221 (76%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||||||||| | || || |||||||||||||| ||||| ||||| || || | | || Sbjct 9312793 ACGAAGTCTCAACACTAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGT 9312852 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | |||||||||||| |||||||| | ||||| || | ||| ||||||||||||| ||| Sbjct 9312853 ACATCCATCTTCCAGTTGCTTGCCAACAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCC 9312912 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||| ||||||||||| || || ||||| | || || ||| || ||||| || Sbjct 9312913 TTCCTTATCCTGGATCTTGGCCTTTACATTTTCTGTTGTATCCGAGGGCTCGACCTCAAG 9312972 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCA 211113 |||| | ||||| || || || ||||| | || | ||||| Sbjct 9312973 AGTGGTGGTCTTCCCTGTCAGGGTCTTCATGAAAATCTGCA 9313013 Score = 84.2 bits (92), Expect = 5e-11 Identities = 132/188 (70%), Gaps = 17/188 (9%) Strand=Plus/Minus Query 210895 GAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCC 210954 ||||||| ||||| |||||||||| ||| ||| | ||||| | || | Sbjct 28138655 GAAGTCTCCACACAAGATGAAGAGTGGCCTCCTTT-GAATGTTGAAGTCAG--------- 28138606 Query 210955 TTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTT 211014 |||||||||||| |||||||| || |||| ||| | ||| |||| ||||| || Sbjct 28138605 -TCCATCTTCCAGTTGCTTGCCAGCAAAGAGAAGCC---TTTGATCAGAAGGAA---ATT 28138553 Query 211015 CCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAG 211074 |||| ||||||||| | || || ||||| | || || | | ||||||||| |||| Sbjct 28138552 CCTTATCCTGGATCCTGGTCTTTACCTTTTCTGTTGTATCCGGGGGTTCAACCTCCAGAG 28138493 Query 211075 TGATCGTC 211082 |||| ||| Sbjct 28138492 TGATGGTC 28138485 >seq17 Length=71137785 Score = 159 bits (176), Expect = 8e-34 Identities = 163/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| |||||||||||||| |||||||| || || | ||||| | |||||| Sbjct 20311850 AGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 20311909 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||| || || || ||||| | | || ||||| || || | ||||| || || Sbjct 20311910 TCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCTTCTTTTTCT 20311969 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || |||||||||||| | || ||||| |||||||| || Sbjct 20311970 TGGATCTTCACCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTT 20312029 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 || || ||||| ||||||||||| | ||||||| Sbjct 20312030 TTACCAGTGAGGGTCTTTACAAAGATCTGCATT 20312062 Score = 149 bits (164), Expect = 1e-30 Identities = 168/224 (75%), Gaps = 6/224 (3%) Strand=Plus/Plus Query 210895 GAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCG-CAAGGGTC 210953 ||||||| | | ||| |||||||||||||| ||||| ||||| || || | ||| | Sbjct 30372891 GAAGTCTCAACAAAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAG--- 30372947 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | |||||| ||| |||||||| || ||||| || | ||| |||||||||||| ||||| Sbjct 30372948 --TACATCTTTCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAGCTCCT 30373005 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 ||||| |||||| ||| || || ||||| |||| || ||| || ||||| || Sbjct 30373006 TCCTTACCCTGGACCTTGACCTTTACATTTTCTATGGGATCTGAGGGCTCGACCTCAGGA 30373065 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||||| ||||| ||| | || ||||| || || | |||||| || Sbjct 30373066 GTGATGGTCTTCCCCATCAGGGTCTTCACGAAAATCTGCATCTT 30373109 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || |||||||| || |||||||| || || | ||||| | |||||| Sbjct 20310026 AGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 20310085 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||| || || || ||||| || | || ||||| || || | || || ||||| Sbjct 20310086 TCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCT 20310145 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| |||||||||||| | || ||||| || ||||| ||| Sbjct 20310146 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 20310205 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| | ||||| || || | |||||| Sbjct 20310206 TTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 20310237 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| ||||||||||| || |||||||| || || | ||||| | ||||| Sbjct 20310254 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCC 20310313 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||| || || || ||||| || | || ||||| || || | || || ||||| Sbjct 20310314 TCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCT 20310373 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| |||||||||||| | || ||||| || ||||| ||| Sbjct 20310374 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 20310433 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| | ||||| || || | |||||| Sbjct 20310434 TTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 20310465 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| ||||||||||| || |||||||| || || | ||||| | ||||| Sbjct 20310482 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCC 20310541 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||| || || || ||||| || | || ||||| || || | || || ||||| Sbjct 20310542 TCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCT 20310601 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| |||||||||||| | || ||||| || ||||| ||| Sbjct 20310602 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 20310661 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| | ||||| || || | |||||| Sbjct 20310662 TTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 20310693 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| ||||||||||| || |||||||| || || | ||||| | ||||| Sbjct 20310710 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCC 20310769 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||| || || || ||||| || | || ||||| || || | || || ||||| Sbjct 20310770 TCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCT 20310829 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| |||||||||||| | || ||||| || ||||| ||| Sbjct 20310830 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 20310889 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| | ||||| || || | |||||| Sbjct 20310890 TTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 20310921 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| ||||||||||| || |||||||| || || | ||||| | ||||| Sbjct 20310938 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCC 20310997 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||| || || || ||||| || | || ||||| || || | || || ||||| Sbjct 20310998 TCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCT 20311057 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| |||||||||||| | || ||||| || ||||| ||| Sbjct 20311058 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 20311117 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| | ||||| || || | |||||| Sbjct 20311118 TTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 20311149 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| ||||||||||| || |||||||| || || | ||||| | ||||| Sbjct 20311166 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCC 20311225 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||| || || || ||||| || | || ||||| || || | || || ||||| Sbjct 20311226 TCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCT 20311285 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| |||||||||||| | || ||||| || ||||| ||| Sbjct 20311286 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 20311345 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| | ||||| || || | |||||| Sbjct 20311346 TTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 20311377 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| ||||||||||| || |||||||| || || | ||||| | ||||| Sbjct 20311394 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCC 20311453 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||| || || || ||||| || | || ||||| || || | || || ||||| Sbjct 20311454 TCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCT 20311513 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| |||||||||||| | || ||||| || ||||| ||| Sbjct 20311514 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 20311573 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| | ||||| || || | |||||| Sbjct 20311574 TTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 20311605 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| ||||||||||| || |||||||| || || | ||||| | ||||| Sbjct 20311622 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCC 20311681 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||| || || || ||||| || | || ||||| || || | || || ||||| Sbjct 20311682 TCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCT 20311741 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| |||||||||||| | || ||||| || ||||| ||| Sbjct 20311742 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 20311801 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| | ||||| || || | |||||| Sbjct 20311802 TTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 20311833 >seq3 Length=120038259 Score = 154 bits (170), Expect = 3e-32 Identities = 174/228 (76%), Gaps = 5/228 (2%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCG-CAAGGG 210951 || |||||| | || | |||||||||||||| ||||| ||||| || || | ||| | Sbjct 100093961 ACAAAGTCTCAACACTAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAG- 100094019 Query 210952 TCCT-TCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACT 211010 | | ||||||||||| |||||||| || ||||| || | ||| ||||||||||||| | Sbjct 100094020 -CATGTCCATCTTCCACGTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATT 100094078 Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 |||||||| ||||||||||| | || | ||| || || || ||| || |||| | Sbjct 100094079 CCTTCCTTATCCTGGATCTTGACCATTACATCTTCTATTGTATCCGAGGGCTCGACCTTG 100094138 Query 211071 AGAGTGATCGTCTTTCCCGTGA-GAGTCTTTACAAACACCTGCATTTT 211117 |||||||| ||||| || || | ||||||| ||||| | |||||| || Sbjct 100094139 AGAGTGATGGTCTTCCCTGTCAGGAGTCTTCACAAAAATCTGCATCTT 100094186 >seq11 Length=106225002 Score = 147 bits (162), Expect = 5e-30 Identities = 170/225 (76%), Gaps = 7/225 (3%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCG-CAAGGG 210951 |||| |||| || ||||| |||||||||||||| ||||| ||||| || | | ||| | Sbjct 47457347 ACGACGTCTCAGCACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTTGGTCAAAGA 47457406 Query 210952 TCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTC 211011 | |||||||||||| || ||||| || | ||| || | ||| |||||||||||||| | Sbjct 47457407 --CATCCATCTTCCAGTTGTTTGCCAGCAACGATCAGTCTTTGCTGGTCAGGAGGAACAC 47457464 Query 211012 CTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTC--AGAGCTTTCAACCTC 211069 ||||||| ||||||||||| || || ||||| || || || || |||| |||| Sbjct 47457465 CTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCAAGGGCTT--GACCTT 47457522 Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||| |||| || || | ||||| || || | |||||| Sbjct 47457523 GAGAGAGATGCTCTTCCCTGTCAAGGTCTTCACGAAAATCTGCAT 47457567 Score = 105 bits (116), Expect = 2e-17 Identities = 151/210 (72%), Gaps = 6/210 (3%) Strand=Plus/Minus Query 210908 AAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAG 210967 ||||| |||||||||||| ||||| || | || || ||| | | ||||||||||| Sbjct 21255805 AAGGTAAAGAGTGGACTCCTTTTGCAT--TGTAGTCA--AAG--TACATCCATCTTCCAA 21255752 Query 210968 CTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGAT 211027 |||||||| || ||||| || | ||| || || ||||||| ||||| || || ||||| Sbjct 21255751 TTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCGGGAGGAATTCCTTTTTTATCTTGGAT 21255692 Query 211028 CTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCC 211087 ||| || || ||||| || | || ||| || || ||| ||||||| | ||| | Sbjct 21255691 CTTGGCCTTTACATTTTCTATTGCATCTGAGGGTTTGACTTCGGGAGTGATGGACTTCCT 21255632 Query 211088 CGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || || ||||| | || | |||||| || Sbjct 21255631 TGTCAGGGTCTTCATGAAAATCTGCATCTT 21255602 >seq1 Length=157403528 Score = 136 bits (150), Expect = 9e-27 Identities = 165/225 (73%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 || |||||| | ||||| ||||||||| ||| ||||| ||||| || || | || Sbjct 45884706 ACAAAGTCTCAACACAAGAGGAAGAGTGGGCTCCTTTTGAATGTTGTAGTCAAACAAAGT 45884765 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | |||||||||||| |||||||| || ||||| || | ||| ||||||||| ||| || Sbjct 45884766 ACATCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGGTGGTCAGGAAGAATTCG 45884825 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||| |||||||||| || || ||| | || || || ||| | ||||| || Sbjct 45884826 TTCCTTACCCTGGATCTTGGCCTTTACATTTACTATTGTATCCGAGGGCTTGACCTCAAG 45884885 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 |||||| ||||| | || || ||||| | || | |||||| || Sbjct 45884886 AGTGATGGTCTTCACTGTCAGGGTCTTCATGAAAATCTGCATCTT 45884930 >seq2 Length=136510947 Score = 100 bits (110), Expect = 7e-16 Identities = 155/219 (71%), Gaps = 7/219 (3%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTT--ATA----ATCCGCAAGG-GTCCT 210955 || || | ||| || ||||||||| | ||||| || ||| || | | || || | Sbjct 39540259 AGCACCATGTGCAGGGTGGACTCTCTCTGGATATTGGATATTGTATTCTGACGGAGTGCA 39540318 Query 210956 TCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTC 211015 |||| |||||||| |||||||||| || || | ||||||||||| || | || || Sbjct 39540319 GCCATTCTCCAGCTGTGTGCCTGCGAAAATCAGATGCTGTTGGTCAGGCGGGATGCCCTC 39540378 Query 211016 CTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGT 211075 |||||| |||| || ||| || || || |||||||| | || ||||| || || Sbjct 39540379 CTTGTCTCGGATTTTGGCTTTGACATTCTCAGTGGTGTCACTGGGCTCGACCTCAAGGGT 39540438 Query 211076 GATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| ||| | || ||||| ||||| | |||||| Sbjct 39540439 AATGGTCTTGCCCATCAGGGTCTTCACAAAGATCTGCAT 39540477 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158707832152055