Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09] 3,088,511 sequences; 2,785,377,831 total letters Query= NC_000902.1 Length=60942 Score E Sequences producing significant alignments: (Bits) Value seq3082680 96.9 1e-15 >seq3082680 Length=2560 Score = 96.9 bits (106), Expect = 1e-15 Identities = 126/173 (73%), Gaps = 6/173 (3%) Strand=Plus/Plus Query 27273 GCTGAAAATGAAACTCTGCGTGCTGATGTTGCCGCTGGTCGTAAGCGCCTGCGGATCAAC 27332 |||||||| || |||||||| ||||||||| |||| |||||||| ||||| ||||| Sbjct 1256 GCTGAAAACGATGCTCTGCGTCTCGATGTTGCCACTGGCCGTAAGCGGTTGCGGCTCAAC 1315 Query 27333 GCCACCTGCTCCGGTACCGTGCGTGAAGCCA---CCGGCACCTCCGGCGTGGATAATGCA 27389 ||||||||| || | |||| |||| ||||| || |||||||| | ||||| Sbjct 1316 GCCACCTGCAGCGCCCCAGTGC---CCGCCAGTGCCGGCGCCGGCGGCGTGGCTCATGCA 1372 Query 27390 ACCGGCCCCCGACTGGCAGACACCGCTGAACGGGATTATTTCATCCTCAGAGA 27442 | | | || ||| ||| |||| | ||||||||||| ||||||||| Sbjct 1373 AGCACCGCCGAACTCACAGCAGACGCTCGATCGGATTATTTCACCCTCAGAGA 1425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187744898390128