Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_001317.1
Length=30624
Score E
Sequences producing significant alignments: (Bits) Value
seq3088503 387 3e-103
seq3088488 349 7e-92
seq3063309 159 7e-35
seq334975 82.4 1e-11
>seq3088503
Length=21467
Score = 387 bits (428), Expect = 3e-103
Identities = 965/1445 (67%), Gaps = 39/1445 (3%)
Strand=Plus/Minus
Query 2118 GTTTTGCGGATGGACATAAACGACTGCGTGACGTCGGTTGCTCCGGCGTCGTACTCCAGA 2177
|| |||||||| | ||| | |||||||| | |||||| ||||||||| |||||||
Sbjct 11383 GTCTTGCGGATCGCCATCATCGACTGCGCCATGTCGGTCCACCCGGCGTCGAACTCCAGC 11324
Query 2178 CAGCCGCGGCGAATGGTGTCTTTTGCCTTGAGTACCATTGCG-GTTTTCATTTCAGGCGT 2236
| |||| | || ||| | ||||| || |||| ||| ||||| | ||| ||||
Sbjct 11323 CGGCCGTTATGGATCACGTCATAGGCCTTCAGCACCAG-GCGTGTTTTGACTTCGGGCGA 11265
Query 2237 GTAACGGATGCCGCGTGCGGCCGGGTAGAATGAGCGCACCAACTGGAACACGCCGAGGCC 2296
|| | || | | | |||||| |||| |||||||| ||| ||||||| ||
Sbjct 11264 ATAGCTGAAGGTGGTCACAGCCGGGAAGAACTGGCGCACCAGCTGCGCCACGCCGCTACC 11205
Query 2297 GAGGCCGGTTGCGTCAATGCCGATGTATTCGACGCTGTATTTCTCGGTCA-GTTTGCGG- 2354
|| ||||| | ||||| ||||| || || | ||| ||| | |||| |
Sbjct 11204 CAGCCCGGTGACATCAATCCCGATATAGGTCACCCAGTAGCGGTCGCAGACGTTTTTGAT 11145
Query 2355 --ATGCCATCTGCCTGCGCGGCAAAGTCCATGCCCTTCCACTGGTGGCGCTCCAGCATGC 2412
||||| ||||| || ||||||||||||||| | ||||| |||||||| | ||
Sbjct 11144 AAATGCC----GCCTGGGCCGCAAAGTCCATGCCCCGGAATTGGTGCCGCTCCAGGACGC 11089
Query 2413 GGAACTTGCCACCAGAAACCACCGGCGGCGCGAGCACGACGCACCCGGCGCTGTCGCCAG 2472
|||| ||||| || | |||| ||||||||| | ||| || ||||| || || || |
Sbjct 11088 GGAATTTGCCGCCCGGTACCAGCGGCGGCGCAACCACCACCAGCCCGGAGCAATCACCGG 11029
Query 2473 TGTGTGACGGGTCGTAGCCAATCCAGACGGGGCGAGAGCCGAACGGATGGTCGGCGAACG 2532
| | | ||||||||||| ||||| || | || |||||||| | |||||| |
Sbjct 11028 TTTCCGCTGGGTCGTAGCCGATCCATACCTGACGGTCACCGAACGGCCGCATGGCGAATG 10969
Query 2533 GGGCGAAGTCCTC---CCATTCTTCCATCACGTCGACCATGCAGCGCTGCAGCTCCTCGA 2589
| | ||||||| |||||| || |||||||||||||| ||||||| | | |
Sbjct 10968 GCTTGTAGTCCTCTGCCCATTCAACCCAACTGTCGACCATGCAGCTCTGCAGCAACGCCA 10909
Query 2590 ACGGGAATACCGACGCTTTATCGTCGACAAACTCGCACATAAACAGGTTTTTAAAGTCCT 2649
|||| || | ||| |||||| |||||||| ||||| |||||||| || |||
Sbjct 10908 ACGGAAAGATGCTGGCTCCATCGTCAACAAACTCACACATCAACAGGTTGGCGAACGCCT 10849
Query 2650 CATCACTGTTTTCGCGTTTGAGTTGGTCGAGGTCGAACAGGGTGCAGCCACCGGCAAGGG 2709
|| |||| || || | | || | ||||||||| ||||| ||| |
Sbjct 10848 CAGGGCTGTACTCCCGACGCAACTCCTCAATGTCGAACAGATCACAGCCGCCGTGCTCTG 10789
Query 2710 CGTCCTCAATGGTGACAATCTGCCGCCACTGGCCATCGTCGCAGAGCTGGCCACCGGCGA 2769
||||| |||||||| |||||||||||| | || ||||||| | | || ||
Sbjct 10788 CGTCCAGGATGGTGACGATCTGCCGCCACAACCGGTCCTCGCAGAACCGCCCCTGTTGGA 10729
Query 2770 GCGCGCGGTGACTGATGTCAATTTCGATGCGGT-CGGCAATACGGCTGCGCCCCTTGTTG 2828
|||| | ||| | ||| | | | || | | || | | |||| |||||||||
Sbjct 10728 GCGCCCCGTGGGAAACGTCGACCTTGGTGTGTTGCGCCGCT--GGCTTA--CCCTTGTTG 10673
Query 2829 AACAGCTCGCCAGACCAGAAGGGATAAGCGCCGTGCGCCAGCGTTGAGGGTGTCGAAAAG 2888
|| ||||||| | |||||||| || || | || |||| | || || ||||| |||
Sbjct 10672 AAGCGCTCGCCGGTCCAGAAGGTGTAGGCCTCATGGGCCATGCTGGACGGCGTCGAGAAG 10613
Query 2889 TAGGTTGAGCGCAGATGCTTCTGCGAGGCCATGCCCGAGGCGACTTTGCGCAGCTTCTGA 2948
|||||| |||| | ||| ||| |||||||||||| ||||| ||| ||| | || |
Sbjct 10612 TAGGTTTTGCGCCACTTCTTGTGCATGGCCATGCCCGAAGCGACCTTGTTCAGTTCCTCA 10553
Query 2949 AAATTCGGGATCCAGAATATTTCATCGACATACAGGTCGCCGTTATGGCTCTGAGCCGTG 3008
|| || ||||||| | ||| |||| || | | ||||| | || ||| || ||
Sbjct 10552 AACTTGAACGTCCAGAAGAATTCGTCGAAGTAGAAATTGCCGTGGTAGCCCTGGGCGGTA 10493
Query 3009 TTGGAGTTGGTACCGAGAAAAATCAGCTTTGCGCCGTTGTTGCCAATGACAATCGGGTCG 3068
| ||||||||||| |||| ||||| ||||||||| | |||| || || || ||
Sbjct 10492 CGCGCATTGGTACCGAGGAAAAACAGCTCGGCGCCGTTG--GGCAAT-ACGATGGGATCC 10436
Query 3069 CCGGTCAGGTCGA---CGTCAACCAGTCGCGCAAACTGTAT-GATGTATTCGCGGAACAC 3124
|| ||||| |||| || |||| || ||||| || | |||||| |||| ||||
Sbjct 10435 CCCGTCAGCTCGACACCGATAACCTCACGGGCAAA-TGCCTGGATGTACCCGCGAAACAG 10377
Query 3125 GTAAGCCTGCGTTTTACTGGCCGACAGAAAAATCTGGTTATGGCCGGTCTTGAGTGCTCG 3184
|| || || |||| || ||||| || ||||| || | ||||| | || ||
Sbjct 10376 ATAGGCTTGGTTTTTCGATGCGGACAGGAAGATCTGATTGCGCCCGGTTTCCAGCGCATC 10317
Query 3185 CAGCAGTGCCTCACGGGAAAAATAGAACGTCGCGCCAATCTGGCGGGATTTGAGAATGTC 3244
|| | ||||| |||| ||| || | |||||||| ||||| ||| |||||| ||| |
Sbjct 10316 AAGAAACGCCTCGCGGGCAAAGTAATAGGTCGCGCCGATCTGCCGGCTTTTGAGGATGAC 10257
Query 3245 GCGAATACGGTG--TGCCAGTCCTGCGCGGTACCACTGCAACTGGTACTCGAAAGACTGG 3302
|||| | || || ||||| || |||||||| | |||||| |||||| | |
Sbjct 10256 GCGAGTCCGTTGATTGCCA-----GCCCGGTACCAGTCTTTCTGGTAGTCGAAACAGCCG 10202
Query 3303 TCGAAAAATAATTCCTCCAGCTTTTCGATAGCCTCGTCGCTGAAAAAATTCTTTTTCGGC 3362
|||| ||| ||| || | ||||| ||| ||||||| | || ||| | |
Sbjct 10201 TCGATAAACGCTTCACGCAACAGCTCGATCTGCTCTTCGCTGATATCGTTTTTTGGGGTC 10142
Query 3363 TTCTTGCGCTCACCCTTGTTGCGGTTGGCGACGTTGGGGTTAAGGTCGGCCTCGTTGCCG 3422
|| || | ||||| |||||| || || | ||| ||||| || |||| ||| | ||
Sbjct 10141 TTTTTCTTCGGACCCTCGTTGCGTTTAGCCAGGTTAGGGTTGAGCTCGGTTTCGGTACC- 10083
Query 3423 GTCTGGCTG-TAGCGGTTAACGCGTGCCAGTCGTTCAATCTGCCGCCCGAGCAGGTCAAT 3481
| | ||| |||| | || | ||| | ||||| | || || ||||| |||||
Sbjct 10082 GCCGCCCTGAAAGCGCTGAATTCTGGCCTGGCGTTCCAATTGGCGGTGCAGCAGATCAAT 10023
Query 3482 CTCTTTGAAGTCACCGCCTGACTTTTGC--GGCTTGGCGATGAGCTGAATCAGGCGCGCC 3539
|| |||||||| ||||| || |||| |||| ||| ||||| | || |||||
Sbjct 10022 TTCCTTGAAGTCCCCGCC--GCTCTTGCTTTCCTTGAGGATCAGCTGCACCAACCGCGCT 9965
Query 3540 TCAAG 3544
|| ||
Sbjct 9964 TCCAG 9960
Score = 145 bits (160), Expect = 1e-30
Identities = 205/288 (71%), Gaps = 0/288 (0%)
Strand=Plus/Minus
Query 5501 TATCAGGATGACCCGAAACTCGTTGCCATCGTTGGCCGTAAGCTGCTGGCCGACAAATAT 5560
|| ||||| ||||| | || || | ||| || || | |||||||||||||| |||
Sbjct 8099 TACCAGGAAGACCCTGATCTGGTGGTGATCTGCGGTCGCCAACTGCTGGCCGACAAGTAT 8040
Query 5561 TTTCCGCTGGTCAACAAACAGCAGGAAAACACCGAGTCGCTCGCGGCGGATATCATCATC 5620
|| ||| | |||||||| | | | || || ||| || || |||||| ||| |
Sbjct 8039 TTCCCGATCATCAACAAAGACAACGCGCCGACTGAAATGCTGGCCGCCGATATCGTCACC 7980
Query 5621 AGCCAGAAGCGCATCGGCAACCTGCCAGCCGTACGTGTGCCGTACTTCCCGGCGAACGCG 5680
|| || |||||| | ||||| |||||||||| || ||||| ||||||||| || || |
Sbjct 7979 AGTCAAAAGCGCTTGGGCAATTTGCCAGCCGTGCGCGTGCCTTACTTCCCGCCGCGCGGG 7920
Query 5681 GTGTTCGTGACCACGCTGGAAAACCTCTCTATCTATTTCATGGATGAGAGCCACCGCCGC 5740
|| | || |||| |||||||||||| || ||||| | ||| | |||| |||||||
Sbjct 7919 TTGCTGGTCACCAAGCTGGAAAACCTGTCGATCTACTGGCAGGAAGGCAGCCGCCGCCGC 7860
Query 5741 AGCATTGATGAAAACCCGAAAAAAGACCGCGTGGAAAACTACGAGTCG 5788
| | | | || || | || |||||| | |||||||||||||||
Sbjct 7859 ACCGTCGTCGACAATGCCAAGCGTGACCGCATCGAAAACTACGAGTCG 7812
Score = 95.1 bits (104), Expect = 2e-15
Identities = 195/290 (67%), Gaps = 0/290 (0%)
Strand=Plus/Minus
Query 431 AAGTCATCCTTTGTGGCGACCTCGCTCAGTGGCACGATTTTAATGCCGTCCGGTTTTCCA 490
|| |||||||| | || ||||| || | || | | | || |||||| || ||
Sbjct 12324 AATTCATCCTTGGCCGCCACCTCACTGACCGGGATCAGCTGTATCCCGTCCTTCTTGCCG 12265
Query 491 TTGGGAGCGTAGAAAAACAGGTTTTTAAAATTGCCGAGCCCTTTCGAGTTGCGCATCGCC 550
|||| | || | ||||| ||| ||||||||| |||| || |||| | |||
Sbjct 12264 GTGGGCGAATACACAAACAAGTTGCGAAAATTGCCTGGCCCCTTGGAGTCCTTGAGAGCC 12205
Query 551 TCGCGCAGCGATTCGACGTCGGTCGCGCTCTGCGCCGGGTCGGTCACATACATGATGTAA 610
| ||||| | |||| ||||| | |||| || | ||||||| || | ||| |
Sbjct 12204 TTGCGCAAAGCGTCGATATCGGTTTCAGTCTGTGCGGCATCGGTCATGTAGAGAATGAAG 12145
Query 611 CCCGCATGCGCGCCGTTCTGGTAATACTTGCGGCGGAACAGCGTTGCGGATTCATTCAGC 670
|| || || ||| |||| ||| |||||||||||||||| ||| || ||||| || |||
Sbjct 12144 CCGGCGTGACTGCCATTCTCGTAGTACTTGCGGCGGAACAACGTGGCCGATTCGTTGAGC 12085
Query 671 CAGGCGGAATTAAGCGCGCTGAGATATTCGGGCAGGCCGTAAATCTCCTG 720
| || || | | || || | | || |||| ||| |||||||||||
Sbjct 12084 AACGCCGACTGCAAGGCACTAATCCACTCCGGCAAGCCATAAATCTCCTG 12035
Score = 91.5 bits (100), Expect = 3e-14
Identities = 188/276 (68%), Gaps = 8/276 (3%)
Strand=Plus/Minus
Query 4031 CTTGAACACCTGCGCGGCCTGTTGCCCGATGGCATATTCAAGCGTTACGGCGATGTGGTC 4090
|| |||||| | ||| |||||||||| ||| || |||||| |||||||| ||| |
Sbjct 9489 CTGGAACACTTCCGCAGCCTGTTGCCGGATAGCCCATTCAAAGCCTACGGCGACGTGCTG 9430
Query 4091 GAGCTGAAAGCCGA-GAAGATTGACGACGATTCTGCGCTTAACGGCAAGTGGGCGTTGTT 4149
| | | || |||| |||| | || | | | || || |||| ||| ||||
Sbjct 9429 GCGGTCAAGACCGAAGAAG-TGGAAATCAA--CGGCCAGAAA----AAGTTGGCTCTGTT 9377
Query 4150 CGCTAAAATCACCCCGACCGATGACCTTATCGCGATGAATAAAGCCGCGCAGAAGGTCTA 4209
||| || || ||||| || || ||||| ||||| || ||| ||||||||||||
Sbjct 9376 CGCCCAAGTCGAACCGACGCCCGAACTGATCGCCATGAACAAGGCCAGGCAGAAGGTCTA 9317
Query 4210 CACCTCAATGGAAATTCAGCCGAATTTTGCCAATACCGGCAAATGCTACCTCGTCGGCCT 4269
|||||| || ||||| | | || ||| | || || || |||| ||||||| ||
Sbjct 9316 CACCTCCATCGAAATCGACGACAGCTTCGCCGACACAGGGGAAGCCTACATCGTCGGTCT 9257
Query 4270 TGCTGTCACCGATGACCCGGCGAGCCTCGGCACTGA 4305
|| |||||||| ||| || ||| | || |||||
Sbjct 9256 GGCAGTCACCGACTCCCCTGCCAGCTTGGGTACTGA 9221
>seq3088488
Length=17142
Score = 349 bits (386), Expect = 7e-92
Identities = 1134/1744 (65%), Gaps = 80/1744 (5%)
Strand=Plus/Minus
Query 14189 GATTTTCACCACGGCACGAAGGTCATCGAAATAAATGACGGTACGCGTGTTATTTCCACG 14248
|||| || ||||||| | |||||||||| | || ||||| || || ||| |||
Sbjct 16622 GATTATCTCCACGGCGTGCGGGTCATCGAACTCAACGACGGCACCCGCCCCATTCGCACT 16563
Query 14249 GTCGCAACCGCAATCGTCGGCATGGTCTGGACAGCCAGCGATGCGGATGCCGAGACATTT 14308
| | |||||| || |||||||||| || || || |||||||| || | | |||
Sbjct 16562 ATTCCCACCGCAGTCATCGGCATGGTTTGCACCGCTGAAGATGCGGA--CCCACTCGTTT 16505
Query 14309 CCCCTCA--ACGAGCCGGTACTGATTACCAATGTGCAGAGCGCCATTGCGAAAGCCGGTA 14366
||||| || || || || || ||||| ||||| | |||| | | || |||||
Sbjct 16504 TCCCTCTGGACACTCCAGTCCTCATCACCAACGTGCAAACCGCCGTCGGCAAGGCCGGCG 16445
Query 14367 AAAAAGGCACTCTGTCAGCTTCCCTGCAGGCCATCGCCGACCAGTCAAAGCCTGTCACCG 14426
|| ||||| ||| | || |||||| | ||||||||||||| | |||||| | |
Sbjct 16444 TCAAGGGCACCCTGGCTGCCAGCCTGCAAGGCATCGCCGACCAGACCAAGCCTTAC---G 16388
Query 14427 TTGTCGTGCGCGTTGCCGAAGGT-ACCGGAGACGATGCAGAAGCGCAGACCACGTCCAAC 14485
|| ||||| || || ||| | | || || || |||||| ||| ||| | |
Sbjct 16387 TTATCGTG---GTA--CG--GGTCAAAGAAGGCGCTGACGAAGCGACGACTACGAGCGCC 16335
Query 14486 ATTATCGGCGGCACGGATGAGAACGGTAAATACACCGGTATCAAGGCGCTGCTAACTGCC 14545
| || ||||| || | |||| |||||||||| || || || ||||| | |||
Sbjct 16334 CTGATTGGCGGTACAACACCAACCGGTCAATACACCGGCATGAAAGCTCTGCTCGCAGCC 16275
Query 14546 GAAGCGGTCACCGGCGTTAAGCCGCGCATTCTCGGTGTGCCGGGTCTCGATACGCAGGAA 14605
|| | | ||| | | ||||| || || || ||||| || ||||| | | |
Sbjct 16274 AAATCACGCGTGGGCATGACTCCGCGTATCCTTGGCGTGCCAGGCCTCGACAGTTTGCCA 16215
Query 14606 GTCGCAACCGCACTTGCATCGGTCTGTATCAGCCTGCGTGCGTTTGGTTACGTCAGCGCA 14665
|| || ||||| || | | || | |||||| || |||| ||||| |||||
Sbjct 16214 GTAGCCACCGCCCTCGGCGCCATCGCCAAAGACCTGCGCGCCTTTGCATACGTAAGCGCC 16155
Query 14666 TGGGGCTGTAAGACCATTTCCGAGGCGATGGCATATCGCGAGAATTTCAGCCAGCGCGAG 14725
||| ||| || |||| |||| |||| || |||||||| ||| | |||||
Sbjct 16154 TGGAACTGCAAAACCAAGGAAGAGGTAGTGGCGTACCGCGAGAACTTCGGTGCCCGCGAA 16095
Query 14726 CTGATGGTCATCTGGCCTGATTTCCTCGCATGGGATACCACCGCGAACGCCACCGNNNNN 14785
||||||| || ||||| || ||||| ||||| || | | ||| ||||
Sbjct 16094 ATGATGGTGATTTGGCCGGACTTCCTGAACTGGGACACTGTCACCAACAAGACCGCCAGC 16035
Query 14786 NNNNNNNNNNNNNNNNNNGCACTCGGTCTGCGTGCCTACATCGACCAGACTATCGGCTGG 14845
|| ||||| || || ||| | |||||||| | || |||
Sbjct 16034 GCTTCGGCCGTGGCCCGCGCCCTCGGCCTTCGCGCCAAGATCGACCAAGAGACGGGTTGG 15975
Query 14846 CACAAAACGCTGTCTAACGTTGGCGTGCAGGGCGTTACCGGCATCAGCGCCTCAGTCTTT 14905
|| ||||| ||||| ||||| | |||| ||||| ||||| ||||||||| || ||
Sbjct 15974 CATAAAACCCTGTCCAACGTGGCCGTGAGTGGCGTGACCGGTATCAGCGCCGACGTGTTC 15915
Query 14906 TGGGATTTGCAGGCATCCGGCACAGATGCTGACCTGCTCAACGAGGCCGGAGTCACCACG 14965
|||||| |||| | | ||| || || || |||||| || ||||||||
Sbjct 15914 TGGGATCTGCAAAACCCAGCCACCGACGCCAACTACCTCAACAGCAACGACGTCACCACC 15855
Query 14966 CTGGTG--CGCAAGGATGGTTTCCGTTTTTGGGGGAACCGCACATGCTCTGATGACCCGC 15023
||| | ||| | | ||||| || || ||||| | |||||| ||| ||||||||||
Sbjct 15854 CTGATCAACGCCA--ACGGTTTTCGCTTCTGGGGTAGCCGCACCTGCAGTGATGACCCGT 15797
Query 15024 TTTTCCTGTTTGAGAACTACACCCGAACCGCGCAGGTGCTGGCCGACACAATGGCTGAGG 15083
| ||| || || ||||||||||| ||||||||| | || || ||||| |||| || |
Sbjct 15796 TGTTCGCCTTCGAAAACTACACCCGCACCGCGCAGATCCTCGCGGACACCATGGGCGAAG 15737
Query 15084 CGCACATGTGGGCGGTCGATAAGCCCATCACCGCATCGCTCATCCGTGACATTGTCGACG 15143
||||||||||||| || || || || ||| || || | || ||| | ||||| |
Sbjct 15736 CGCACATGTGGGCAGTTGACCGCCCTATGCACGCCTCCCTGGTACGCGACCTGGTCGAAG 15677
Query 15144 GCATTAACGCCAAATTCCGCGAGCTGAAATCAAATGGCTACATCGTGGACGGTGAATGCT 15203
|| | | |||||| | |||||| ||||||| | |||||| | | | ||| ||||
Sbjct 15676 GCGTAAGCGCCAAGATGCGCGAGTTGAAATCCCAGGGCTACCTGATCGGCGGCAGTTGCT 15617
Query 15204 GGTTCGACGAGGA-ATCGAACGATAAGGAAACCCTCAAGGCCGGGAAACTGTATATCGAC 15262
|| | || || ||| ||| || || |||||||||||||| || || | | ||
Sbjct 15616 GGAACCCGGACGACATC-AACACCAAAGACACCCTCAAGGCCGGCAAGCTCTGGCTTGAT 15558
Query 15263 TACGACTATACACCGGTTCCCCCACTGGAAAGCCTGACCCTGCGCCAGCGTATCACCGAT 15322
|||||||| || || || || ||||| ||| ||| ||| | |||||||| ||||||||
Sbjct 15557 TACGACTACACCCCCGTGCCGCCACTTGAAGACCTCACCTTCCGCCAGCGAATCACCGAC 15498
Query 15323 AAATATCTG--------------GTGAATCTG--GCTGAATC-GGTC-AACAGCTAAGG- 15363
|| ||| | | ||| | ||| || | |||| | || | ||
Sbjct 15497 CGTTACCTGATCGACTTCGCCAAGGGCATCAGCAGCTAAACCGGGTCTCCCCGCGAGGGG 15438
Query 15364 -----AGCCTGA---------------AACA---ACATGGCACTACCCCGCAAACTTAAA 15400
| ||||| |||| ||||||| | || ||||| || |||
Sbjct 15437 AGTTCACCCTGAACACGTATCCCGGAGAACACCGCCATGGCAATGCCTCGCAAGCTCAAA 15378
Query 15401 TATCTGAACATGTTCAATGACGGCCTTAGCTACATGGGCGTTGTTGAA-TCCGTGACGCT 15459
| || ||| |||||||||||||| ||||| | ||| ||| |||| ||| | || ||
Sbjct 15377 AACCTCAACCTGTTCAATGACGGCAACAGCTATCTCGGC-TTGGTGAAGTCCCTCACCCT 15319
Query 15460 GCCGAAGCTGACCCGCAAGCTCGAAAACTATCGCGGCGGCGGTATGAATGGCGCTG-CAG 15518
||| || ||||||| | ||| |||||||||||||| ||||||||| | | ||
Sbjct 15318 GCCCTCCCTCGGCCGCAAGATGGAAGCGTATCGCGGCGGCGGCATGAATGGCCCGGTCAA 15259
Query 15519 CGATTGACCTCGGCCTCGACGATGATGCGCTTACTG-TCGAATGGTCTGTCGGTGGCCTG 15577
| |||||| ||| | ||| || | || | | | |||||||| |||||||||
Sbjct 15258 AG-CTGACCTGGGCATGTCCGACGACG-GCATCCAGTTCGAATGGAAGACCGGTGGCCT- 15202
Query 15578 CCTGATGTG-GCGCTGTGGGCGCAGTATGCCGC-GCCGGGGGCTGATGCCGTGCCGCTGC 15635
||| || | || || | |||| | ||| | | | || | ||| | ||||
Sbjct 15201 --CGATCTGATCTCTCTGCG-TCAGTTCGGCGCGGTCAACGCCTCCAG-TGTGGCCCTGC 15146
Query 15636 GTTTTGCTGGCTCTTACCAGCGTGACGACACTGGCGAAATCGTTGCGGTCGAGGTGGTCA 15695
| || ||||| ||||||||| |||||||| |||||| || || || |||||
Sbjct 15145 GATTCTCTGGCCCTTACCAGCAAGACGACACAGGCGAAGTCAGCAATGTGGAAGTGGTTG 15086
Query 15696 TGCGTGGCCGTCATAAAGAAATCGACGGCGGCGAAAATAAGCAGGGTGAAAATACCTCGA 15755
||||||||||||| || ||||| ||||| ||| || || | || ||
Sbjct 15085 TGCGTGGCCGTCACGAAACCATCGAGATGGGCGATGCCCAGCCCGGCGAGGACAC--TGA 15028
Query 15756 CCAAAC--TGTCGACCGTTTGCACCTATTACCGCCTCACGATTGATGGTAGCGACATTAT 15813
|| | || | ||| |||| ||| ||| || || | ||||| || || ||
Sbjct 15027 ACACTCCATGACCACCACCTGCAGCTACTACAAGCTGACCGTAGATGGCGAAGAAATCAT 14968
Query 15814 CGAAATCGACACCGTCAACATGGTCGAGAAGGTGAACGGCGTCGACCGTCTGGAACAGCA 15873
||| ||||| ||||| | ||||||||||| ||||| || ||| ||||| ||||
Sbjct 14967 CGAGATCGATCTGCTCAACTTTGTCGAGAAGGTCAACGGTGTGGACATGCTGGAGAAGCA 14908
Query 15874 CCGC 15877
||||
Sbjct 14907 CCGC 14904
>seq3063309
Length=1409
Score = 159 bits (176), Expect = 7e-35
Identities = 736/1146 (64%), Gaps = 54/1146 (5%)
Strand=Plus/Minus
Query 2126 GATGGACATAAACGACTGCGTGACGTCGGTTGCTCCGGCGTCGTACTCCAGACAGCCGCG 2185
||||| || |||| ||| | || |||||| |||||||| | || | | || |
Sbjct 1118 GATGGTCAGGAACGCCTGTGCGATGTCGGTCCAACCGGCGTCCCATTCGATGCGGCTCCC 1059
Query 2186 GCGAATGGTGTCTTTTGCCTTGAGTACCATTGCGGTTTTCATTTC-AGGCGTGTAACGGA 2244
| || ||||| | || |||||||||| || | |||| | || |||| ||||| |||
Sbjct 1058 CTGGATCGTGTCCTGGGCTTTGAGTACCAGTGTGTTTTTGGTCTCGAGGC-TGTAATGGA 1000
Query 2245 TGCCGC-GT-GCGGCCGGGTAGAATGAGCGCACCAACTGGAACACGCCGAGGCCGAGGCC 2302
| ||| || || ||||||||| |||||||| | ||||| ||| ||||| ||
Sbjct 999 T--CGCTGTCGCACGCGGGTAGAAGTCGCGCACCAGGTCAAACACACCGTAGCCGATACC 942
Query 2303 GGTTGCGTCAATGCCGATGTATTCGACGCTGTATTTCTCGGTCAGTTTGCGGATGCCATC 2362
||||| || |||||||||| | ||| || | |||||| ||||| || ||
Sbjct 941 GGTTGTATCGATGCCGATGTGCTGCACGTTGAAACGCTCGGTAAGTTTCTTGACCTGGTC 882
Query 2363 TGCCTGCG-CGGCAAAGTCCATGCCCTT-CCACTGGTGGCGCTCCAGCATGCGGAACTTG 2420
||||| | || | | ||||| ||| ||| ||||| |||||||| ||
Sbjct 881 GGCCTGGTACTTGAACGAC--TGCCCACGCCAACTGTGTTTTTCCAGGATGCGGAATTTC 824
Query 2421 CCACCAGAAACCACCGGCGGCGCGAGCACGACGCACCCGGCGCTGTCGCCAGTGTGTGAC 2480
| || | ||| ||||| |||| ||| |||||| |||| ||||| ||| | |
Sbjct 823 GCTCCGGGTTCCAGTGGCGGAGCGACCACCACGCACGTGGCGTCGTCGCGGGTGCGGCTC 764
Query 2481 GGGTCGTAGCCAATCCAGACGGGGCGAGAGCCGAACGGATGGTCGGCGAACGGGGCGAAG 2540
|| |||||||||| ||| || |||| |||||| || | || ||| | ||
Sbjct 763 GGATCGTAGCCAAGCCACACCGGGCTGTTGCCGAAAGGTCGATCCAGTTCAGGGTTGTAG 704
Query 2541 TCCTCCCATTCTTCCATCACGTCGACCATGCAGCGCTGCAGCTCCTCGAACGGGAATACC 2600
|||||||| | | | || |||| || |||| ||| || | || |||
Sbjct 703 TCCTCCCA--CAACGA-CAGGTCGGAGTAACACCGCTCCAGGTCTTTGAGGCCGAA---- 651
Query 2601 GACGCTTTATC----GTCGACAAACTCGCACATAAACAGGTTTTTAAAGTCCTCATCACT 2656
| |||| | | ||||| |||| ||| ||||| | | || | || ||
Sbjct 650 GGCGCTCTGGCTGCTGTCGATGAACTTGCAGTAGAACAGCTGCTGGAATTTGTCTTCGTC 591
Query 2657 GTTTTCGCGTTTGAGTTGGTCGAGGTCGAACAGGGTGCAGCCACCGGCAAGGGCGTCCTC 2716
|| || | | ||||| |||||||||||||| |||||| ||||| | |||||| ||
Sbjct 590 GTACTCCAGCTGCAGTTGCTCGAGGTCGAACAGATCGCAGCCGCCGGCTATGGCGTCGTC 531
Query 2717 AATGGTGACAATCTGCCGCCACTGGCCATCGTCGCAGAGCTGGCCACCGGCGAGCG---- 2772
| ||||| | | ||||| ||||| ||| ||| | ||| || | |
Sbjct 530 CAGGGTGATGGTTTTGCGCCATTGGCCGTCGGGGCACAATGCGCCCTGGGTGTATGACGC 471
Query 2773 CGCGGTGACTGATGTCAATTTCGATGCGGTCGGCAATACGGCTGCGCCCCTTGTTG---A 2829
| ||||| | || | ||| | |||| | || |||| ||||| |
Sbjct 470 CTCGGTGG-----GCCA-----GGTGCCGCCGGCCTTCTTGCCGCGCTTGCTGTTGCGGA 421
Query 2830 ACAGCTCGCCAGACCAGAAGGGATAAGCGCCGTGCGCCA--GCGTTGAGGGTGTCGAAAA 2887
| |||||| |||||||| || || || ||||| | ||| || || ||||||||
Sbjct 420 ATTCCTCGCCCGACCAGAACGGGTACGCTTGGTGCGAGACTGCGCTG--GGCGTCGAAAA 363
Query 2888 GTAGGTTGAGCGCAGATGCTTCTGCGAGGCCATGCCCGAGGCGACTTTGCGCAGCTTCTG 2947
||||||| |||| | ||| || | | ||||| | ||| || ||| || || |
Sbjct 362 GTAGGTTTTGCGCCACTTCTTGTGGGTGCCCATGGCACTGGCCACGGTGCTGAGTTTGTC 303
Query 2948 AAAATTCGGGATCCAGAATATTTCATCGACATACAGGTCGCCGTTATGGCTCTGAGCCGT 3007
|| | | ||||| || |||||||| || | || ||| | | || ||| || ||
Sbjct 302 GAAGTCACGTATCCAAAAATACTCATCGACGTAGACGTGGCCATGGTAGCCCTGGGCGGT 243
Query 3008 GTTGGAGTTGGTACCGAGA--AAAATCAGCTTTGCGCCGTTGTTGCCAATGACAATCGGG 3065
| || ||||| ||| | ||| ||||| ||||||||| || || ||||||
Sbjct 242 GCTGCTATTGGT--CGACAAGAAACGCAGCTCGGCGCCGTTGCTGAGCGTG---ATCGGG 188
Query 3066 TCGCCGGTCAGGTCGACGTC-AACCAGTCGC---GCAAACTGTATGATGTATTCGCGGAA 3121
| ||||||||| |||| ||| ||||| | || |||||||| |||||||| ||||||
Sbjct 187 TTGCCGGTCAGCTCGATGTCGAACCACT-GCTTTGCAAACTGGATGATGTAACTGCGGAA 129
Query 3122 CACGTAAGCCTGCGTTTTACTGGCCGACAGAAAAATCTGGTTATGGCCGGTCTTGAGTGC 3181
| | | ||||| ||||||||||| || | |||||| | ||||||| | ||
Sbjct 128 AATTTCCGACTGCGAGCGGCTGGCCGACAGGAACACCTGGTTGTCGCCGGTCAGCACGGC 69
Query 3182 TCGCAGCAGTGCCTCACGGGAAAAATAGAACGTCGCGCCAATCTGGCGGGATTTGAGAAT 3241
|| | || || | || || ||| ||||| ||| | ||||||| ||| || ||
Sbjct 68 GTCCATGAACGCTTCGCCGGCGAAGTAGTACGTCAGGCCCACCTGGCGGCTTTTCAGGAT 9
Query 3242 GTCGCG 3247
|| |||
Sbjct 8 GTTGCG 3
>seq334975
Length=539
Score = 82.4 bits (90), Expect = 1e-11
Identities = 153/225 (68%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 2126 GATGGACATAAACGACTGCGTGACGTCGGTTGCTCCGGCGTCGTACTCCAGACAGCCGCG 2185
||||| || |||| ||| | || |||||| |||||||| | || | | || |
Sbjct 317 GATGGTCAGGAACGCCTGGGCGATGTCGGTCCAACCGGCGTCCCATTCGATGCGGCTCCC 258
Query 2186 GCGAATGGTGTCTTTTGCCTTGAGTACCATTGCGGTTTTCATTTCAGGCGTGTAACGGAT 2245
| || ||||| | ||||||||||||| | | |||| ||||| | ||||| ||||
Sbjct 257 CTGGATCGTGTCCTGGGCCTTGAGTACCAGAGTGTTTTTGGTTTCAAGGCTGTAATGGAT 198
Query 2246 GCCGCGTGCGGCCGGGTAGAATGAGCGCACCAACTGGAACACGCCGAGGCCGAGGCCGGT 2305
|| || ||| ||||| |||||||| | ||||||||| ||| | |||||
Sbjct 197 CGCGGTCGCTCGCGGATAGAAGTCGCGCACCAGGTCAAACACGCCGTAGCCAATACCGGT 138
Query 2306 TGCGTCAATGCCGATGTATTCGACGCTGTATTTCTCGGTCAGTTT 2350
| ||| |||||||||| | ||| || | |||||| |||||
Sbjct 137 CGTGTCGATGCCGATGTGCTGCACGTTGAAACGCTCGGTAAGTTT 93
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 94285522497052
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |