Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_001609.1
Length=11624
Score E
Sequences producing significant alignments: (Bits) Value
seq3078897 87.8 1e-13
>seq3078897
Length=2073
Score = 87.8 bits (96), Expect = 1e-13
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 2724 CCACCACTGCATCATTAAACGCCGCTCATCCAAATGCTCGGAGGTATGGATATATGCCGC 2783
|||||| | ||| || | | ||||| || | ||||| | ||||| || || ||
Sbjct 640 CCACCAGTTCATGATCAGCCTGCGCTCCTCGATGAACTCGGCCTTGTGGATGTAAGCGGC 699
Query 2784 ACGTACATTATTACGCTCTGAGTGGCTCAGTTGCCTCTCTATCGCGTCATCACTCCATAA 2843
|| || || || || || |||||||| |||| ||| || || || |||| ||
Sbjct 700 GCGGACGTTGTTGCGTTCCTTGTGGCTCATCTGCCGCTCGATGGCTGTGTCCGTCCACAA 759
Query 2844 CCCCGACTCCCCCAACGCACCACGCGCCATAGTCCTAAACCCATGCCCACACACCTCGGT 2903
|| ||||| || || | | ||||| | | ||||||||||||||| | |||||
Sbjct 760 GCCTGACTCGATCAGTGCGCTGCAGGCCATCGAACGAAACCCATGCCCACAGATCTCGGA 819
Query 2904 TTTAGTATCATAGCCCATCGCACGCAATGCGCTGTTTACCGTGTTTTC 2951
||| || || || |||||| || | |||||||| |||||||||||
Sbjct 820 TTTGGTGTCGTACCCCATCTTCCGAAGCGCGCTGTTCACCGTGTTTTC 867
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 35793172043152
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |