Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09] 3,088,511 sequences; 2,785,377,831 total letters Query= NC_001895.1 Length=33593 Score E Sequences producing significant alignments: (Bits) Value seq3088503 392 7e-105 seq3088488 324 3e-84 seq3063309 91.5 3e-14 >seq3088503 Length=21467 Score = 392 bits (434), Expect = 7e-105 Identities = 1020/1527 (67%), Gaps = 45/1527 (3%) Strand=Plus/Minus Query 1302 CGCCCAGGCGAGGTCGGCGTGGCTGGCTTCCTCGCTGCGGCTGGCCTCATAGGTGGCGCT 1361 ||||||||| |||||||| |||| || | ||| |||| | || |||||| Sbjct 11462 CGCCCAGGCCAGGTCGGCATGGCCGGTGTTGTCGTTGCGCCCTGCGGTGTAGGTGTACTG 11403 Query 1362 GCGTCCGC-TGCTGGTCATGGTCTTGCGGATAGCCATAAACGAGCTG-GTGATGTCGGTG 1419 ||| |||| ||| ||| | ||||||||||| ||||| | ||| ||| | |||||||| Sbjct 11402 GCGACCGCCTGC-GGTGACCGTCTTGCGGATCGCCATCATCGA-CTGCGCCATGTCGGTC 11345 Query 1420 GCGCTGACGTCGTATTCCAGACAGCCACGGCGGATAACGTCTTTTGCCTTGAGCACCATT 1479 | | ||||| | ||||| | ||| |||| ||||| | ||||| ||||||| Sbjct 11344 CACCCGGCGTCGAACTCCAGCCGGCCGTTATGGATCACGTCATAGGCCTTCAGCACCAG- 11286 Query 1480 GCG-GTTTTCATTTCCGGCGTGTAGCGGATA----TCACGCGCGGCGGGATAGAACGAGC 1534 ||| ||||| | ||| |||| |||| || |||| | ||||| ||||| || Sbjct 11285 GCGTGTTTTGACTTCGGGCGAATAGCTGAAGGTGGTCACA---GCCGGGA-AGAACTGGC 11230 Query 1535 GCACGAGCTGGAACACGCCGACACCGAGGCCGGTGGCATCAATACCGATGTATTCGACGT 1594 |||| ||||| ||||||| ||| || |||||| ||||||| ||||| || || Sbjct 11229 GCACCAGCTGCGCCACGCCGCTACCCAGCCCGGTGACATCAATCCCGATATAGGTCACCC 11170 Query 1595 TGTATTTTTCGGTGAGTTTGCGGATGGATTCCGCCTGGGTGGCAAAGTCCATGCCTTTCC 1654 ||| ||| || || ||| || ||||||||| |||||||||||||| Sbjct 11169 AGTAGCGGTCGCAGACGTTTTTGATAAATGCCGCCTGGGCCGCAAAGTCCATGCCCCGGA 11110 Query 1655 ACTGGTGACGCTCAAGTATTCTGAATTTGCCACCGGCCACCACCGGCGGTGCCAGTACCA 1714 | ||||| ||||| || | | ||||||||| || | |||| |||||| || | |||| Sbjct 11109 ATTGGTGCCGCTCCAGGACGCGGAATTTGCCGCCCGGTACCAGCGGCGGCGCAACCACCA 11050 Query 1715 CGCATCCGGCGCTGTCGCCACGGTGT--GACGGGTCGTAACCAATCCATACCGGGCGGGA 1772 | |||| || || || ||| | | |||||||| || ||||||||| | ||| Sbjct 11049 CCAGCCCGGAGCAATCACC--GGTTTCCGCTGGGTCGTAGCCGATCCATACCTGACGGTC 10992 Query 1773 GCCGAACGGATTGGCGGCAAACGGCGCATAGTCTTC---CCATTCTTCCAGCGTGTCGAC 1829 |||||||| ||| || ||| ||||| || |||||| || ||||||| Sbjct 10991 ACCGAACGGCCGCATGGCGAATGGCTTGTAGTCCTCTGCCCATTCAACCCAACTGTCGAC 10932 Query 1830 CATGCAGCGTTGCAGCTCCTCGAACGGGAACACCGATGCCTTG-TCGTCAACAAATTCAC 1888 |||||||| |||||| | | ||||| || | | || || ||||||||||| |||| Sbjct 10931 CATGCAGCTCTGCAGCAACGCCAACGGAAAGAT-GCTGGCTCCATCGTCAACAAACTCAC 10873 Query 1889 ACATGAACAGGTTTTTAAAATCGTCGGCGCTGTTTTCGCGTTTGAGCTGCTCAATGTCGA 1948 |||| |||||||| || | || | ||||| || || | || ||||||||||| Sbjct 10872 ACATCAACAGGTTGGCGAACGCCTCAGGGCTGTACTCCCGACGCAACTCCTCAATGTCGA 10813 Query 1949 ACAGCGTGCAGCCGCCTTTCAGGGCGTCCTCAATGGTGACAATCTGTCGCCACTGGCCGT 2008 |||| |||||||| | | |||||| |||||||| ||||| |||||| | || Sbjct 10812 ACAGATCACAGCCGCCGTGCTCTGCGTCCAGGATGGTGACGATCTGCCGCCACAACCGGT 10753 Query 2009 CCGCACAGAGAAGCCCACCGGCAAGGGCGTTATGACTGACGTCGATTTCCACGCGTTCGG 2068 || | |||| |||| || || || ||||||| | | ||| | Sbjct 10752 CCTCGCAGAACCGCCCCTGTTGGAGCGCCCCGTGGGAAACGTCGACCTTGGTGTGTT--G 10695 Query 2069 CGGCGCTGGCGCGTCCCCGGTTAAACAGTTCACCCGACCAGAACGGGTAGGCGTCGTGCG 2128 || ||||||| ||| ||| || | || || | |||||| | |||||| || || | Sbjct 10694 CGCCGCTGGC-TTACCCTTGTTGAAGCGCTCGCCGGTCCAGAAGGTGTAGGCCTCATGGG 10636 Query 2129 CCAGCGTGGACGGGGTGGAGAAATAGGTCGAGCGCAGGTGACTCTGTGAGGCCATACCTG 2188 ||| ||||||| || ||||| ||||| |||| | | || |||||| || | Sbjct 10635 CCATGCTGGACGGCGTCGAGAAGTAGGTTTTGCGCCACTTCTTGTGCATGGCCATGCCCG 10576 Query 2189 ATGCCACCTTACGCAGTACCTGAAAATTCGGGATCCAGAAAATCTCATCGACGTACAGGT 2248 | || ||||| |||| ||| ||| || ||||||| | || |||| ||| | | Sbjct 10575 AAGCGACCTTGTTCAGTTCCTCAAACTTGAACGTCCAGAAGAATTCGTCGAAGTAGAAAT 10516 Query 2249 CGCCGTTATGACTCTGCGCGGTGTTGGAGTTGGTGCCGAGAAAAATCAGTTTTGCGCCGT 2308 ||||| | | ||| ||||| | ||||| ||||| |||| ||| | |||||| Sbjct 10515 TGCCGTGGTAGCCCTGGGCGGTACGCGCATTGGTACCGAGGAAAAACAGCTCGGCGCCG- 10457 Query 2309 TATTGCCCAGGACAATCGGGTCACCGGTCAG---GTCAACGTCAACCAGACGGGCAAAGG 2365 ||| || || || || || || ||||| | || || |||| ||||||||| | Sbjct 10456 --TTGGGCAATACGATGGGATCCCCCGTCAGCTCGACACCGATAACCTCACGGGCAAATG 10399 Query 2366 CGATGATGTATTCGCGGAACACATACGCCTGTGTTTTACTGGCCGACAGAAAAATCTGGT 2425 | |||||| |||| |||| ||| || || |||| || ||||| || ||||| | Sbjct 10398 CCTGGATGTACCCGCGAAACAGATAGGCTTGGTTTTTCGATGCGGACAGGAAGATCTGAT 10339 Query 2426 TATGACCGGTTTTCAGGGCACGCAGCAGCGCCTCGCGGGAAAAATAAAACGTCGCGCCAA 2485 | | ||||||| ||| ||| || | ||||||||||| ||| ||| | |||||||| | Sbjct 10338 TGCGCCCGGTTTCCAGCGCATCAAGAAACGCCTCGCGGGCAAAGTAATAGGTCGCGCCGA 10279 Query 2486 TCTGGCGGGATTTCAGGATATCGCGGATGCGGTGCT--CAAGCCCGGCACGATACCAGTG 2543 |||| ||| ||| ||||| |||| | || || | | ||||||| ||||||| Sbjct 10278 TCTGCCGGCTTTTGAGGATGACGCGAGTCCGTTGATTGCCAGCCCGG-----TACCAGTC 10224 Query 2544 CAGCTGATAGTCGAAAGACTGCTCAAAGAAAATCTGCTC-CAGCTTTTCGATGGCCTCGT 2602 ||| ||||||||| | || | ||| || | | || | ||||| ||| | Sbjct 10223 TTTCTGGTAGTCGAAACAGCCGTC-GATAAACGCTTCACGCAACAGCTCGATCTGCTCTT 10165 Query 2603 CACTGAAAAAATTCTTTTTCGGTTTGCGCCGTCCG-CCTTTGTTACGGTTAGCGACGTTC 2661 | |||| | || |||| ||| | | || | || | ||| || ||||| | ||| Sbjct 10164 CGCTGATATCGTT-TTTTGGGGTCTTTTTCTTCGGACCCTCGTTGCGTTTAGCCAGGTTA 10106 Query 2662 GGATTAAGGTCTGCCTCGTTGCCGGTCTGGCTG-TAGCGGTTGACCCGTGCCAGTCGTTC 2720 || || || || | ||| | || | | ||| |||| | | | ||| | ||||| Sbjct 10105 GGGTTGAGCTCGGTTTCGGTACC-GCCGCCCTGAAAGCGCTGAATTCTGGCCTGGCGTTC 10047 Query 2721 AATCTGGCGTCCCAGCAGGTCAATTTCCTTGAAGTCACCGCCGGTTTTCTGTGGTTTGAT 2780 | ||||| |||||| ||||||||||||||||| |||||| | || | |||| Sbjct 10046 CAATTGGCGGTGCAGCAGATCAATTTCCTTGAAGTCCCCGCCGCTCTTGCTTTCCTTGAG 9987 Query 2781 GATGAGCTGGGTCAGCCGCGCTTCCAG 2807 ||| ||||| || |||||||||||| Sbjct 9986 GATCAGCTGCACCAACCGCGCTTCCAG 9960 Score = 179 bits (198), Expect = 8e-41 Identities = 219/299 (73%), Gaps = 0/299 (0%) Strand=Plus/Minus Query 4743 ATTGAACCGTGGTATCAGGAAGACCCTGACCTTGTGGTGATTGTGGGGCGTCAGCTACTG 4802 |||| |||||||| |||||||||||||| || |||||||| || || || || ||| Sbjct 8111 ATTGCGCCGTGGTACCAGGAAGACCCTGATCTGGTGGTGATCTGCGGTCGCCAACTGCTG 8052 Query 4803 GCGGACAAGTATTTCCCCATCGTCAACAAGGAGCAGGACAACAGCGAAATGCTGGCCGCT 4862 || |||||||||||||| ||| ||||||| || | | | |||||||||||||| Sbjct 8051 GCCGACAAGTATTTCCCGATCATCAACAAAGACAACGCGCCGACTGAAATGCTGGCCGCC 7992 Query 4863 GACGTCATCATCAGCCAGAAACGCATCGGTAACCTACCAGCGGTACGCGTCCCGTACTTC 4922 || || ||| ||| || || ||| | || || | ||||| || ||||| || |||||| Sbjct 7991 GATATCGTCACCAGTCAAAAGCGCTTGGGCAATTTGCCAGCCGTGCGCGTGCCTTACTTC 7932 Query 4923 CCGGCGGATGCGATGCTCATCACGAAGCTGGAAAACCTGTCCATCTACTACATGGATGAC 4982 ||| || | | |||| |||| ||||||||||||||||| ||||||| ||| | | Sbjct 7931 CCGCCGCGCGGGTTGCTGGTCACCAAGCTGGAAAACCTGTCGATCTACTGGCAGGAAGGC 7872 Query 4983 AGCCATCGCCGCGTGATTGAGGAAAACCCGAAACTCGACCGCGTGGAGAACTACGAGTC 5041 |||| |||||| | | || || | || | |||||| | || ||||||||||| Sbjct 7871 AGCCGCCGCCGCACCGTCGTCGACAATGCCAAGCGTGACCGCATCGAAAACTACGAGTC 7813 Score = 116 bits (128), Expect = 8e-22 Identities = 223/322 (69%), Gaps = 10/322 (3%) Strand=Plus/Minus Query 425 AAATCGTCCTTCGTCGCCACTTCACTGAGGGGGATAATTTTAATGCCGTCGGCTT-TCCC 483 || || ||||| | |||||| ||||||| ||||| | | || ||||| ||| | | Sbjct 12324 AATTCATCCTTGGCCGCCACCTCACTGACCGGGATCAGCTGTATCCCGTC--CTTCTTGC 12267 Query 484 CTGTGGG-GCATAGAGAAACAGGTTTTTAAAGTTGTTGCGGCCTTTCGA---CTTGACCA 539 | ||||| | ||| | ||||| ||| ||| ||| | || || || ||||| | Sbjct 12266 CGGTGGGCGAATACACAAACAAGTTGCGAAAATTGCCTGGCCCCTTGGAGTCCTTGAG-A 12208 Query 540 TGTTTTCGCGAAGCATTTCGATATCGTTGCGATCCTGCACGGCATCGGTGACATACATGA 599 || ||| |||| | |||||||| | | ||| |||||||||| | || | | Sbjct 12207 GCCTTGCGCAAAGCGT--CGATATCGGTTTCAGTCTGTGCGGCATCGGTCATGTAGAGAA 12150 Query 600 TGTATCCGGCATGTGCGCCATTTTCGTAATACTTGCGGCGGAACAACGTGGCCGACTCAT 659 || | ||||| || |||||| ||||| |||||||||||||||||||||||||| || | Sbjct 12149 TGAAGCCGGCGTGACTGCCATTCTCGTAGTACTTGCGGCGGAACAACGTGGCCGATTCGT 12090 Query 660 TCAGCCAGGCAGAGTTAAGGGCGCTGAGATATTCCGGCAGGCCGTACAGCTCCTGATTAA 719 | ||| | || || | | ||| || | | ||||||| ||| || | |||||| | | Sbjct 12089 TGAGCAACGCCGACTGCAAGGCACTAATCCACTCCGGCAAGCCATAAATCTCCTGGTGCA 12030 Query 720 TATCCGGCTCCAGCAGGTGAAA 741 ||||| || |||| ||||| Sbjct 12029 AATCCGCTTCTCGCAGATGAAA 12008 Score = 82.4 bits (90), Expect = 2e-11 Identities = 117/165 (71%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 3412 GGCGCTGTTTGCGAAAATCACCCCGACCGATGACCTTATCGCGATGAACAAGGCCGCGCA 3471 ||| ||||| || || || ||||| || || ||||| |||||||||||| ||| Sbjct 9385 GGCTCTGTTCGCCCAAGTCGAACCGACGCCCGAACTGATCGCCATGAACAAGGCCAGGCA 9326 Query 3472 GAAGGTCTACACCTCAATGGAAATTCAGCCGAACTTTGCCAACACCGGCAAATGTTATCT 3531 ||||||||||||||| || ||||| | | ||| ||| |||| || || || | Sbjct 9325 GAAGGTCTACACCTCCATCGAAATCGACGACAGCTTCGCCGACACAGGGGAAGCCTACAT 9266 Query 3532 GGTGGGTCTGGCCGTCACCGATGACCCGGCAAGCCTCGGCACGGA 3576 || |||||||| |||||||| ||| || ||| | || || || Sbjct 9265 CGTCGGTCTGGCAGTCACCGACTCCCCTGCCAGCTTGGGTACTGA 9221 >seq3088488 Length=17142 Score = 324 bits (358), Expect = 3e-84 Identities = 778/1160 (67%), Gaps = 54/1160 (5%) Strand=Plus/Minus Query 17658 GACTATCATCACGGCGTGCAGGTGCTGGAGATTAACGAGGGCACCCGCGTCATTTCCACC 17717 || |||| |||||||||| ||| | || | ||||| ||||||||| |||| ||| Sbjct 16622 GATTATCTCCACGGCGTGCGGGTCATCGAACTCAACGACGGCACCCGCCCCATTCGCACT 16563 Query 17718 GTATCCACGGCCATTGTCGGCATGGTCTGCACGGCCAGCGATGCAGATGCGGAAACC--- 17774 | |||| || | |||||||||| ||||| || || ||||||||| | Sbjct 16562 ATTCCCACCGCAGTCATCGGCATGGTTTGCACCGC------TGAAGATGCGGACCCACTC 16509 Query 17775 ---TTCCCCCTCAATAAACCTGTGCTGATTACCAATGTGCAGAGCGCAATTTCAAAGGCC 17831 ||||| || | | || || || || ||||| ||||| | ||| | |||||| Sbjct 16508 GTTTTCCCTCTGGACACTCCAGTCCTCATCACCAACGTGCAAACCGCCGTCGGCAAGGCC 16449 Query 17832 GGTAAAAAAGGCACGCTGGCGGCATCGTTGCAGGCCATCGCTGACCAGTCAAAACCGGTC 17891 || || ||||| ||||| || |||| | |||||| |||||| | || || | Sbjct 16448 GGCGTCAAGGGCACCCTGGCTGCCAGCCTGCAAGGCATCGCCGACCAGACCAAGCC--TT 16391 Query 17892 ACCGTTGTCATG---CGCGTGGAAGACGGCACCGGTGATGACGAGGAA-ACGAAACTCGC 17947 || ||| || || || || |||| ||| | | || | ||| || |||| ||| Sbjct 16390 AC-GTTATCGTGGTACGGGTCAAAGAAGGCGCTGACGAAG-CGACGACTACGAG---CGC 16336 Query 17948 GCAGACCGTTTCCAATATCATCGGCACCACCGATGAAAACGGTCAGTACACCGGACTAAA 18007 | || || | || || |||| || |||||| |||||||| | || Sbjct 16335 CCTGA---TTGGCGGTA-------CAACACC-----AACCGGTCAATACACCGGCATGAA 16291 Query 18008 AGCCATGCTGGCGGCGGAGTCGGTAACCGGTG----TTAAACCGCGTATTCTCGGCGTGC 18063 ||| |||| || || | || || ||| | | |||||||| || ||||||| Sbjct 16290 AGCTCTGCTCGCAGCCAAATC----ACGCGTGGGCATGACTCCGCGTATCCTTGGCGTGC 16235 Query 18064 CGGGACTGGATACCAAAGAGGTGGCTGTTGCACT-GGCATCAGTCTGTCAGA-AGCTGCG 18121 | || || || | || || || || ||| || || | || | | ||||| Sbjct 16234 CAGGCCTCGACAGTTTGCCAGTAGCCACCGCCCTCGGCGCCA-TC-GCCAAAGACCTGCG 16177 Query 18122 TGCTTTCGGGTATATCAGCGCATGGGGCTGTAAAACCATTTCCGAGGTGAAAGCCTATCG 18181 || || | || | ||||| ||| ||| ||||||| ||||| || || || Sbjct 16176 CGCCTTTGCATACGTAAGCGCCTGGAACTGCAAAACCAAGGAAGAGGTAGTGGCGTACCG 16117 Query 18182 TCAGAATTTCAGCCAGCGTGAGCTGATGGTCATCTGGCCGGATTTCCTCGCATGGGATAC 18241 |||| ||| | || || ||||||| || |||||||| ||||| ||||| || Sbjct 16116 CGAGAACTTCGGTGCCCGCGAAATGATGGTGATTTGGCCGGACTTCCTGAACTGGGACAC 16057 Query 18242 GGTCACCAGTACCACCGCCACCGCGTATGCCACCGCCCGTGCGCTGGGGCTGCGCGCTAA 18301 ||||||| | ||||||| ||| | ||| ||||| || || || || ||||| || Sbjct 16056 TGTCACCAACAAGACCGCCAGCGCTTCGGCCGTGGCCCGCGCCCTCGGCCTTCGCGCCAA 15997 Query 18302 AATCGACCAGGAGCAGGGCTGGCATAAAACGCTGTCCAATGTCGGGGTGAACGGTGTTAC 18361 |||||||| ||| ||| ||||||||||| |||||||| || | |||| || || || Sbjct 15996 GATCGACCAAGAGACGGGTTGGCATAAAACCCTGTCCAACGTGGCCGTGAGTGGCGTGAC 15937 Query 18362 CGGCATCAGCGCATCTGTATTCTGGGATTTGCAGGAGTCCGGCACCGATGCTGACCTGCT 18421 ||| |||||||| || ||||||||| |||| | | | |||||| || || || Sbjct 15936 CGGTATCAGCGCCGACGTGTTCTGGGATCTGCAAAACCCAGCCACCGACGCCAACTACCT 15877 Query 18422 TAACGAGTCAGG-CGTCACTACGCTGATTCGCCGCGACGGTTTCCGCTTCTGGGGTAACC 18480 ||| || | | |||||| || ||||| | | ||||||| ||||||||||||| || Sbjct 15876 CAAC-AGCAACGACGTCACCACCCTGATCAACGCCAACGGTTTTCGCTTCTGGGGTAGCC 15818 Query 18481 GTACCTGCTCTGATGACCCGCTGTTCCTCTTTGAAAACTACACCCGCACCGCGCAGGTCG 18540 | |||||| |||||||||| ||||| ||| |||||||||||||||||||||||| || Sbjct 15817 GCACCTGCAGTGATGACCCGTTGTTCGCCTTCGAAAACTACACCCGCACCGCGCAGATCC 15758 Query 18541 TGGCCGACACGATGGCTGAGGCGCACATGTGGGCGGTGGACAAGCCCAT-CACTGCAACG 18599 | || ||||| |||| || |||||||||||||| || ||| || || ||| || | Sbjct 15757 TCGCGGACACCATGGGCGAAGCGCACATGTGGGCAGTTGACCGCCCTATGCAC-GCCTCC 15699 Query 18600 CTGATTCGCGACATCGTTGACGGCATCAATGCCAAATTCCGTGAGCTGAAAACAAACGGC 18659 ||| | |||||| | || || ||| | | ||||| | || ||| ||||| | | ||| Sbjct 15698 CTGGTACGCGACCTGGTCGAAGGCGTAAGCGCCAAGATGCGCGAGTTGAAATCCCAGGGC 15639 Query 18660 TATATCGTGGATGCGACCTGCTGGTTCAGCGAAGAATCCAACGATGCGGAAACCCTCAAG 18719 || | | | | | |||||| | || || |||| || ||||||||| Sbjct 15638 TACCTGATCGGCGGCAGTTGCTGGAACCCGGACGACATCAACACCAAAGACACCCTCAAG 15579 Query 18720 GCCGGAAAACTGTATATCGACTACGACTATACACCGGTGCCTCCTCTCGAAAACCTGACC 18779 ||||| || || | | || |||||||| || || ||||| || || ||| |||| ||| Sbjct 15578 GCCGGCAAGCTCTGGCTTGATTACGACTACACCCCCGTGCCGCCACTTGAAGACCTCACC 15519 Query 18780 CTGCGCCAGCGTATTACCGA 18799 | |||||||| || ||||| Sbjct 15518 TTCCGCCAGCGAATCACCGA 15499 >seq3063309 Length=1409 Score = 91.5 bits (100), Expect = 3e-14 Identities = 201/296 (68%), Gaps = 8/296 (3%) Strand=Plus/Minus Query 2221 ATCCAGAAAATCTCATCGACGTACAGGTCGCCGTTATGACTCTGCGCGGTGTTGGAGTTG 2280 ||||| ||| |||||||||||| | || ||| | | | ||| |||||| || ||| Sbjct 292 ATCCAAAAATACTCATCGACGTAGACGTGGCCATGGTAGCCCTGGGCGGTGCTGCTATTG 233 Query 2281 GT-GCCGAGAAAAATCAGTTTTGCGCCGTTATTGCCCAGGACAATCGGGTCACCGGTCAG 2339 || | | ||||| ||| | |||||||| || | || |||||| |||||||| Sbjct 232 GTCGACAAGAAACG-CAGCTCGGCGCCGTTGCTGAGCGTGA---TCGGGTTGCCGGTCAG 177 Query 2340 GTCAACGTC-AACCA--GACGGGCAAAGGCGATGATGTATTCGCGGAACACATACGCCTG 2396 || | ||| ||||| | ||||| ||||||||| |||||| | | || ||| Sbjct 176 CTCGATGTCGAACCACTGCTTTGCAAACTGGATGATGTAACTGCGGAAAATTTCCGACTG 117 Query 2397 TGTTTTACTGGCCGACAGAAAAATCTGGTTATGACCGGTTTTCAGGGCACGCAGCAGCGC 2456 | ||||||||||| || | |||||| | ||||| || ||| || | ||| Sbjct 116 CGAGCGGCTGGCCGACAGGAACACCTGGTTGTCGCCGGTCAGCACGGCGTCCATGAACGC 57 Query 2457 CTCGCGGGAAAAATAAAACGTCGCGCCAATCTGGCGGGATTTCAGGATATCGCGGA 2512 |||| || || || ||||| ||| | ||||||| ||||||||| | ||||| Sbjct 56 TTCGCCGGCGAAGTAGTACGTCAGGCCCACCTGGCGGCTTTTCAGGATGTTGCGGA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 103437870509010