Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09] 3,088,511 sequences; 2,785,377,831 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq1405227 84.2 3e-11 >seq1405227 Length=123 Score = 84.2 bits (92), Expect = 3e-11 Identities = 72/89 (81%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 205689 TTGATCAAATCCTTGATTTGTATAATTTGTATCCATATCAATATATTTAGCACCAAAATG 205748 |||||| | ||||||| || ||||| || ||||||||| | |||| ||| |||||||| Sbjct 35 TTGATCTACTCCTTGACCTGAATAATCTGAATCCATATCTTTGTATTCAGCCCCAAAATG 94 Query 205749 ACGCCATTGAAAACCATAAACTGGACCTA 205777 | |||||| || ||||||||||| |||| Sbjct 95 CCTCCATTGGAAGCCATAAACTGGGCCTA 123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 726290572924800