Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09] 3,088,511 sequences; 2,785,377,831 total letters Query= NC_002166.1 Length=40751 Score E Sequences producing significant alignments: (Bits) Value seq3088379 1086 0.0 seq3087926 120 8e-23 seq3087822 120 8e-23 seq3088451 95.1 3e-15 seq2884985 93.3 1e-14 >seq3088379 Length=10556 Score = 1086 bits (1204), Expect = 0.0 Identities = 2155/3172 (68%), Gaps = 56/3172 (2%) Strand=Plus/Plus Query 2022 TCGACGACTTCATTTTCCGACCGCTGAGCATGTGATGGAAGAACCTAAATACACGATTGA 2081 ||||||||||| | | | ||||| ||||||||| |||| ||| | | |||| || || Sbjct 2099 TCGACGACTTCCTCTCCAGACCGATGAGCATGTAATGGCAGATACCGACTACAGCATCGA 2158 Query 2082 CCTGCGAACCAATAACGGCTGGTGGGCAAGGCTGCAGTCCTGGTTTGTCGGCGGGCGTTT 2141 |||||| || | | ||||| | || | || ||||||||||| || | Sbjct 2159 CCTGCGCACGCGCAGTCCATTCTGGGCGCGTATGGCGAGCTTCTTTGTCGGCGGCCGCCT 2218 Query 2142 AGTCACCCCAAATCAGGGCTCACAGACGGGGCCTGTTTCGGCCCACGGACACCTGGGCGA 2201 ||||| || | | || |||||||| || || || || ||||| || |||| || Sbjct 2219 GGTCACACCTGAAAAAGGTTCACAGACAGGCCCAGTATCAGCCCAGGGTGTAGTGGGTGA 2278 Query 2202 TTCATCCATTAACGATGAACGGATACTGCAAATTTCGACTGTGTGGCGCT-GCGTGAGCC 2260 ||| | | |||||||| || || || || |||| |||| |||| ||||| | | Sbjct 2279 TTCGGTCGTAAACGATGAGCGCTCGCTCCAGATCGCGACCGTGTT-CGCTTGCGTGCGGC 2337 Query 2261 TGATTTCAACGCTCACGGCATGCTTACCGCTTGATGTCTTCGAAAC-AGACCAGAATGAC 2319 | || || | | || || ||| | || || || || ||| |||| | | ||| ||| Sbjct 2338 TTATCTCCAGCGTGACAGCTTGCATGCCACTGGACGTTTTCCAAACCAAAGGCGAA-GAC 2396 Query 2320 AACCGTAAAAAAGTGGATTTGAGCAATCCACTGGCGCGACTGCTGCGCTACTCACCGAAT 2379 | ||||| || | || || || ||||||||||| || ||| || || Sbjct 2397 AGG-GTAAAG--GTCGGGCTGGATAACCCGCTGGCGCGACTCCTTAAGTACCGCCCCAAC 2453 Query 2380 CAGTACATGACCGCCCAAGAATTCAGGGAGGCCATGACGATGCAGCTCTGTTTCTACGGT 2439 | | |||||| ||| || || | | ||||||||| |||||||| || | ||||| Sbjct 2454 GACTTCATGACTGCCTTTGATTTTCGTGTGGCCATGACTATGCAGCTTTGCTATTACGGC 2513 Query 2440 AACGCATATGCACTTGTGGACCGCAACAGCGCAGGTGACGTGATCAGCCTTCTCCCGCTT 2499 || || || || || | || ||||| | || || ||||| ||||| || | ||||| Sbjct 2514 AATGCCTACGCGCTGATTGAGCGCAATGGGGCTGGGGACGTAATCAGTCTAGTGCCGCTC 2573 Query 2500 CAGTCTGCCAATATGGATGTGAAGCTCGTCGGaaaaaaaG-TGGTTTATCGCTATCAACG 2558 ||||| || |||||||| ||| | || || | | ||||| || |||| || Sbjct 2574 ATGTCTGTGAACATGGATGTTC-GCTTGGAGGGTAAGCGGATCGTTTACCGATATCGCCG 2632 Query 2559 CGACAGCGAATACGCCGACTTTTCGCAGAAAGAGATTTTTCACCTTAAAGGCTTCGGATT 2618 ||||| | | ||||| || || ||| | || ||||||||||| || || || || || Sbjct 2633 CGACACCAAGTACGCAGATTTCAAGCAAAGCGATATTTTTCACCTGAAGGGTTTTGGTTT 2692 Query 2619 CACCGGGCTTGTAGGCCTGTCACCCATTGCTTTTGCCTGTAAATCGGCAGGTGTGGCAGT 2678 | ||| || || ||||| || || |||||||| || || | || ||||| || || Sbjct 2693 TAACGGCCTGGTTGGCCTTTCGCCGATTGCTTTCGCAGCGAAGACCGCCGGTGTAGCCGT 2752 Query 2679 TGCGATGGAGGACCAGCAGCGAGATTTCTTTGCCAACGGCGCCAAGTCTCCGCAAATCCT 2738 ||||||||| || |||||||| || || | ||||||||| |||||||| |||||| | || Sbjct 2753 TGCGATGGAAGATCAGCAGCGCGACTTTTATGCCAACGGTGCCAAGTCCCCGCAACTTCT 2812 Query 2739 CTCAACTGGCGA---AAAAGTGCTAACTGAACAGCAGCGCTCCCAGGTCGAAGAGAATTT 2795 || || || ||| || || | | | ||||| | || ||||| |||||||| Sbjct 2813 TATGACAGGGGATGGAAAGGTTCTCAACAAGGATCAGCGGGCGCAAGTCGAGGAGAATTT 2872 Query 2796 CAAAGAGATCGCCGGCGGCCCGGTaaaaaaaCGCCTCTGGATTCTGGAAGCGGGTTTTTC 2855 ||| ||||| ||||||| || || || || || |||||||| |||| | |||||| | Sbjct 2873 CAAGGAGATATCCGGCGGGCCAGTCAAGAAGCGTCTCTGGATCTTGGAGGGAGGTTTTAC 2932 Query 2856 TACATCGGCAATTGGCGTAACTCCGCAGGATGCCGAAATGATGGCGTCCCGAAAATTTCA 2915 || ||| || ||||| | ||||| || ||||| | ||||| || |||| || || Sbjct 2933 GACCCAGGCCATAGGCGTGAGCCCGCAAGACGCCGAGACAATGGCTGCCAGAAAGTTCCA 2992 Query 2916 GGTAAGTGAACTGGCGCGATTCTTTGGCGTACCGCCTCACCTTGTCGGCGACGTCGAGAA 2975 ||| ||||| |||||||| ||||| ||||| ||||| || || || |||||||| || || Sbjct 2993 GGTGAGTGAGCTGGCGCGGTTCTTCGGCGTGCCGCCGCATCTGGTGGGCGACGTTGAAAA 3052 Query 2976 ATCAACGAGCTGGGGATCGGGCATCGAGCAGCAGAATCTCGGCTTCCTGCAGTACACCCT 3035 ||||| |||||||| || || |||||||| ||||| || ||||| || |||||| | || Sbjct 3053 GTCAACCAGCTGGGGGTCAGGTATCGAGCAACAGAACCTGGGCTTTCTCCAGTACGCGCT 3112 Query 3036 GCAGCCCTATATCTCCAGGTGGGAAAACAGCATTCAGCGGTGGCTTATTCCTGCTAAGGA 3095 | || || | | ||||| | |||||| ||| |||||| | | | || Sbjct 3113 CGACCCTTACCTTGAAATTTGGGAGGGCTGCATTCTGCGATGGCTTGTAAAGCCGAGCGA 3172 Query 3096 TGTTGGCCGCATTCATGCTGAGCACAACCTCGACGGCCTGCTGAGGGGCGATTCGGCATC 3155 | || | |||||||||||||||| ||||| ||||||| || || || | | Sbjct 3173 CCTCGGGGTGTTCCATGCTGAGCACAACCGAGACGGGTTGCTGAGTGGTGACTCAACCGC 3232 Query 3156 CCGCGCTGCCTTTATGAAGGCAATGGGAGAGGCAGGGCTACGCACCATCAACGAGATGCG 3215 |||||| | | || | || || | ||||| | || ||||||| || Sbjct 3233 CCGCGCGAATTACCTAAAAACGTTGATTGATACCGGGCTGCTGACTCCCAACGAGGGCCG 3292 Query 3216 ACGAACGGACAACCTCCCGCCATTGCCGGGTGGCGATGTGGCAATGCGCCAGTCGCAATA 3275 ||| ||| ||| |||| || ||||| || || | ||||| |||||| | Sbjct 3293 GCGAGTCAGCAATAGGCCGAAGCTGCCCGGCGGCGACGTCGCCACACGCCAATCGCAAAA 3352 Query 3276 CGTGCCGATC-ACCGATTTAGGAACCAACAAAGAGCCCCGTAA-TAACGGGGCTTAATTT 3333 ||||||| | | | | || | | ||||| ||||| | ||||| ||| ||| Sbjct 3353 CGTGCCGCTTGATCAACTTGGTCA-----AAAGAACCCCGCCCCTGGCGGGGTTTAGTTT 3407 Query 3334 TTATGGGGGC-CGTAATGCCTGAAATCGTAAAAACGCTGTCCTTCGACGAGACAGAAATC 3392 || ||| | | |||| | | || ||| || || | ||| |||||| ||||| Sbjct 3408 TTCTGGAGCTACCCAATGGCAAATATTCAAAAGACCTTGGCGTTCACCGAGACTCAAATC 3467 Query 3393 AAATTCACCGGTGACGGTAAACAGGGGATTTTTGAAGGCTACGCCTCTGTTTTTAATAAC 3452 || ||| || || || || || | || || || |||||| |||||| | | Sbjct 3468 AAGTTCTCCTCGGATGGCAAGGTTGGTGTGTTCGAGGGGTACGCCAGTGTTTTCGACGTC 3527 Query 3453 ACCGATTCCGATGGCGACATCATTCTGCCCGGGGCGTTTAAAAACGCGCTGGCGAACCAG 3512 | ||| || || ||||||||||| |||||||| || || || || || || | || Sbjct 3528 ATCGACTCAGACGGCGACATCATCCTGCCCGGCGCCTTCAAGAAGGCTTTGTCTTCGCAA 3587 Query 3513 ACCCGAAAAGTGGCGATGTTTTTTAACCACAGGACGTGGGAACTGCCGGTTGGCAAATGG 3572 | ||| |||| | |||||||||||||| ||| | | ||||| ||||| || ||| Sbjct 3588 AGCCGCCAAGTCGGCATGTTTTTTAACCATCAGACCTACGGCCTGCCTGTTGGAAAGTGG 3647 Query 3573 GACAGCCTGGCTGAAGACGAAAAAGGCCTGTATGTGCGCGGTCAACTTACCCCAGGACAC 3632 | ||||| || ||| ||||| || | || | || | || || || || Sbjct 3648 CAGTCGCTGGCGGAGGACAGCAAAGGACTCTTCGTTGGAGGCGAGCTGACGCCCGGTTTG 3707 Query 3633 AGCGGCGCCGCTGACCTGAAAGCGGCAATGCAGCACGGTACGGTTGAAGGTATGTCGGTT 3692 | | || ||||| || || ||| | || || || || ||| |||||||| Sbjct 3708 TCGGTCTCCAACGACCTCCGGGCAGCCATGGAACATAAGACCGTCGAGGGTTTGTCGGTT 3767 Query 3693 GGCTTTTCCGTTTCGAAAGACGATTACACCATCATTCCAACAGGCCGCATTTTTAAGAAT 3752 ||||| |||| || ||||||||| || |||| || |||||| || | ||| Sbjct 3768 GGCTTCACCGTCCTCAAGGACGATTACGCCGTCATCGATACCGGCCGCGCATTCAGCAAT 3827 Query 3753 ATCCAGGCTCTGCGCGAAATCAGCGTCTGCACTTTCCCCGCCAACGAACAGGCTGGCATC 3812 ||||||| ||||| || |||||| | ||||| || || ||||| || ||||| ||| Sbjct 3828 GTCCAGGCCCTGCGAGAGATCAGCATTTGCACCTTTCCTGCCAATGAGCAGGCGACCATT 3887 Query 3813 GCAGCCATGAAAAGTGTCGATGGCATTGAA----ACGATTCGTGATGTGGAGAACTGGCT 3868 | ||||||||||| |||| || || || ||||| ||||| ||| | ||||| Sbjct 3888 GACGCCATGAAAAGC----ATGGAATCGATCAGCACCATTCGCGATGTAGAGCATTGGCT 3943 Query 3869 GAGGGATTCAGTCGGCCTCACCAAATCACAGGCAGTTGGGCTAATTGCCCGGTTTAAGTC 3928 ||||||||| | ||| || | || || || || | || || || |||||| | ||||| Sbjct 3944 GAGGGATTCGGCCGGTCTTTCGAAGTCGCAAGCCCTGGGCCTGATAGCCCGGATCAAGTC 4003 Query 3929 AGCGATTCGGAGCGAGTCCGAGGGCGACGGAAACGAAGCACAAATAAACGCTCTGCTTCA 3988 || ||||||| || ||||| || | || |||| | ||| | || | Sbjct 4004 CGCAGTTCGGAGTGATTCCGAAGGTGGCG------------AAATCACCGCGATCCTGGA 4051 Query 3989 GAGCATCAAATCTTTCCCTTCTAACTTAGGTAAATAATT-ATGTCTGAACTCGCTCTCAT 4047 ||||||| || ||||| ||| |||| || ||| ||||| ||| | || | || Sbjct 4052 TCGCATCAAGTCATTCCCATCTG---TAGGAAATTAAACCATGTCCGAATTGGCCCAAAT 4108 Query 4048 TCAAAAAGCTATCGAAGAATCCCAGCAGAAAATGACCCAGCTTTTCGATGCGCAGAAAGC 4107 |||||| || |||||| | || ||| ||||| |||| ||||| ||||| || Sbjct 4109 TCAAAAGGCAATCGAAACCGCGCAAACGAACATGACTGAGCTGTTCGAGGCGCAAAAGAA 4168 Query 4108 AGAAATCGAAAGCACAGGCCAGGTTTCCAAACAGTTGCAGTCCGACCTGATGAAAGTACA 4167 ||| ||| ||| ||| | || ||| || | || |||||||| || ||| || Sbjct 4169 AGAGATCACCGCCACCGGCGAAGTGAGCAAGAAGATTCAAACCGACCTGCAGACAGTGCA 4228 Query 4168 GGAAGAGCTGACCAAATCCGGCACTCGCCTCTTCGATCTGGAACAGAAACTGGCATCCGG 4227 ||| || |||| | ||||| | ||| | |||||||| || ||| || || ||| Sbjct 4229 GGACGAACTGAAAACGGCCGGCTCCCGCTTGTTCGATCTCGAGTCGAAGCTTGCCGGCGG 4288 Query 4228 CGCT---GAGAATCCTGGTGAGAAGAAATCCTTCTCTGAACGGGCTGCTGAAGAGCTTAT 4284 | || || || |||| | |||||||| ||| |||| ||||| || ||||| || | Sbjct 4289 CACTCTCGATAACCCTGAAGCCAAGAAATCGTTCGCTGAGCGGGCGGCCGAAGATCTGAA 4348 Query 4285 TAAGTCATGGGACGG---TAAACAGGGCACCTTTGGCGCTAAAACGTTTAACAAGTCACT 4341 ||| ||| |||| || |||| | | || | | || | |||| | || Sbjct 4349 GAAGGGCTGGAACGGCTCTACGTCCGGCAAAGTGGACGTGATTAGCTTCAGCAAGGCTCT 4408 Query 4342 AGGCAGTGACGCTGATTCGGCTGGCTCACTGATCCAGCCTATGCAGATCCCAGGCATCAT 4401 ||| | ||| | ||| ||||| | || ||||||| ||||| ||| ||||| | Sbjct 4409 CGGCGCAGGCGCCGCTTCTGCTGGTGCGTTGGTCCAGCCCCAGCAGAACCCCGGCATTCT 4468 Query 4402 CATGCCAGGCCTGCGCCGTCTTACCATTCGTGATCTGCTGGCTCAGGGCCGC---ACTTC 4458 |||||| ||||||||||| || ||||| ||||| |||||||| || || ||| ||||| Sbjct 4469 CATGCCCGGCCTGCGCCGGCTGACCATCCGTGACCTGCTGGCGCAAGGTCGCACGACTTC 4528 Query 4459 CAGTAACGCTCTGGAATATGTGCGTGAAGAGGTGTTTACCAATAACGCCGACGTGGTGGC 4518 | |||| | || || ||||| || | || || | ||| | ||||| ||| || Sbjct 4529 C---GACGCCATCGAGTACGTGCGCGAGAACGTATTCATCAACAGCGCCGCTCCGGTCGC 4585 Query 4519 AGAGAAAGCACTGAAGCCAGAATCGGATATCACCTTCAGCAAACAAACCGCGAACGTGAA 4578 ||| | |||||||| || || | | ||||||| ||| |||| || ||||| || Sbjct 4586 CGAGGGCACGCTGAAGCCCGAGTCCAACCTGACCTTCACCAAGGAAACGGCCAACGTCAA 4645 Query 4579 GACCATCGCGCACTGGGTGCAGGCATCACGTCAGGTGATGGATGATGCGCCAATGCTTCA 4638 ||| | || |||||| | ||||| || || ||| | ||| ||| || || ||||| | Sbjct 4646 GACGCTGGCTCACTGGATTCAGGCTTCTCGCCAGATCATGTCTGACGCTCCGATGCTGGA 4705 Query 4639 GTCCTACATTAACAACCGCCTCATGTACGGCCTGGCACTGAAGGAAGAGGGCCAGCTGCT 4698 ||||| | ||| ||||| ||| || |||| || ||||| || ||||| || Sbjct 4706 ATCCTATGTGAACGGTCGCCTGTTGTTTGGTCTGGACTTGGTCGAAGAAGGGCAGCTTCT 4765 Query 4699 GAACGGCGACGGTACCGGGGATAACCTGGAAGGGCTGAACAAAGTGGCAACCGCCTATGA 4758 |||||||| || ||||| || |||||| || ||||||||||| || |||||||| || Sbjct 4766 CAACGGCGATGGCACCGGTGACAACCTGATCGGCCTGAACAAAGTCGCGACCGCCTACGA 4825 Query 4759 CACCTCGTTGAATGCCACCGGCGACACCCGCGCTGACATTATCGCTCACGCTATTTATCA 4818 ||| || | ||||||||||||||||| ||||||||| || || ||||| || | || Sbjct 4826 CACTACGCTCAATGCCACCGGCGACACTCGCGCTGACCAGATTGCACACGCGATCTTCCA 4885 Query 4819 GGTGACCGAGTCTGAGTTCAGCGCTTCCGGTATCGTCCTGAACCCGCGCGACTGGCACAA 4878 | | ||| || |||||| ||||| || | || ||||||| |||||||||||| Sbjct 4886 GACCAGCGAATCCGAGTTCGAGGCTTCGGGCCTGATCTTGAACCCCCGCGACTGGCACGC 4945 Query 4879 CATCGCGTTGCTGAAAGACAATGAAGGCCGCTATATCTTCGGTGGTCCTCAGGCATTCAC 4938 ||||||| ||||||||||| ||| || || || ||||| || || ||| ||| ||| | Sbjct 4946 CATCGCGCTGCTGAAAGACGGTGATGGTCGTTACATCTTTGGCGGCCCTGCGGCGTTCGC 5005 Query 4939 CAGTAACATCATGTGGGGCTTGCCAGTGGTTCCGACTAAGGCGCAGGCCGCCGGCACCTT 4998 | || |||||||||| | || || ||| | || || || ||||| || || || Sbjct 5006 CGCCAAGGTCATGTGGGGGCTTCCTGTTGTTGCCACCAAAGCCCAGGCACAGGGAACTTT 5065 Query 4999 TACCGTAGGCGGTTTCGATATGGCCTCACAGGTCTGGGATCGCATGGATGCCACCGTGGA 5058 || || ||||| ||||| ||||| || ||| ||||||| |||||||| || || | || Sbjct 5066 CACTGTTGGCGGCTTCGACATGGCTTCGCAGATCTGGGACCGCATGGACGCGACTATCGA 5125 Query 5059 AGTTAGCCGTGAAGACCGCGATAACTTCGTGAAAAACATGCTGACCATCCTGTGCGAAGA 5118 | ||| | || ||||| |||||||||||||||||||||||||||||||||||||| Sbjct 5126 GATCAGCAACCAGGATCGCGACAACTTCGTGAAAAACATGCTGACCATCCTGTGCGAAGA 5185 Query 5119 GCGTCTGGCGCTGGCACATTATCGCCCGACAGCAATCATCAAGGGCACCTTC 5170 ||| |||||| | | || ||||| || || ||||||||||| ||| | ||| Sbjct 5186 GCGCCTGGCGGTTACCCACTATCGTCCTACCGCAATCATCAAAGGCGCTTTC 5237 >seq3087926 Length=6391 Score = 120 bits (132), Expect = 8e-23 Identities = 325/487 (67%), Gaps = 18/487 (4%) Strand=Plus/Minus Query 11875 GATCCGTCACTGGATGAATGCAACGGAACGCTGACGGCCTGCAAACTTCGGTTCGGTGAA 11934 |||||| | |||| | ||||| || ||| || ||||||| | || ||||| || Sbjct 5396 GATCCGGCCAAGGATCAGTGCAAGGGCTGCCTGTCGTCCTGCAAGTTGCGATTCGGCGAG 5337 Query 11935 AACAACGAACTCTCGTTTGGTGGGTTCCCGGGTACGTCGCTGAT---CAGGAGTTGA-TA 11990 ||||||||||| || ||||| || ||||| | ||| || || | |||| ||| | Sbjct 5336 AACAACGAACTGTCCTTTGGCGGATTCCCCGCCGTGTCTCTCATTGCCCGGAGCTGACCA 5277 Query 11991 TGCGTCAGAAAACCATCGATGCGATTATGGCGCATGCTGCAGCTGAATATCCTCGTGAGT 12050 |||| || | | ||| | || || ||||||||| || | || ||||| || |||| Sbjct 5276 TGCGCAAGCACATCATTGCGGCCATCCAGGCGCATGCGGCGACGGAGTATCCGCGAGAGT 5217 Query 12051 GCTGCGG--TG-TGGTGGCACAGAAGAGCCGGGTAGAGAAATATTTTCCATGTCGTAACC 12107 ||||||| || || |||| | |||| | |||| || || || || || ||| Sbjct 5216 GCTGCGGCCTGCTGTTGGC---CGTGGGCCGCGCGCAGAAGTACTTCCCGTGCCGGAACA 5160 Query 12108 TCGCTACCGAGCCGACAGAACATTTTCACCTGTCGCCAGAAGACTATGCAGCTGCTGAGG 12167 | || | ||||||| ||| | || | || || || ||||| || || || || | Sbjct 5159 TAGCCAAGGAGCCGAACGAAGAGTTCCGGCTTGACCCCGAGGACTACGCCGCGGCGGAAG 5100 Query 12168 ACTGGGGTACGGTGATCGCCATCGTTCACAGTCACCCTGACGCCACAACGCAGCCGAGCG 12227 ||| ||| |||||||| |||||| ||| ||||| |||||||| | |||| | | Sbjct 5099 ACTTGGGCGAGGTGATCGGCATCGTCCACTCGCACCCGGACGCCACCA-GCAG--GCCCT 5043 Query 12228 AACTGGATAA---AGCGCAATGCGACGCAACGCTTTTACCCTGGCATATTGTGAGCTGGC 12284 || | || | || || || || ||| ||| || ||||| || || |||| Sbjct 5042 CACCGCATGACTTGGCCATGTGTGAGGCCACGGCTTTGCCATGGCACATCCTGTCTTGGC 4983 Query 12285 CGGATGGGGATTTACGCACCATCCAGCC-GCGCGGAGAACTGCCACTGCTGGAGCGTCCG 12343 | || || || | ||||| || ||| ||| | || || ||| ||||| |||| ||| Sbjct 4982 CCGAGGGTGACTGGCGCACGATTACGCCGGCGGGTAGCAC-GCCGCTGCTCAAGCGCCCG 4924 Query 12344 TTTGTGC 12350 || |||| Sbjct 4923 TTCGTGC 4917 >seq3087822 Length=6084 Score = 120 bits (132), Expect = 8e-23 Identities = 219/316 (69%), Gaps = 10/316 (3%) Strand=Plus/Minus Query 11905 CTGACGGCCTGCAAACTTCGGTTCGGTGAAAACAACGAACTCTCGTTTGGTGGGTTCCCG 11964 ||| || ||||||| | || ||||| |||||||||||||| || || ||||| ||||| Sbjct 2082 CTGTCGTCCTGCAAGTTGCGCTTCGGCGAAAACAACGAACTGTCCTTCGGTGGATTCCCC 2023 Query 11965 GGTACGTCGCTGA---TCAGGAGTTGA-TATGCGTCAGAAAACCATCGATGCGATTATGG 12020 | || |||| || |||| ||| |||||| || | | ||| | || ||| || Sbjct 2022 GCCGTTTCCCTGATTGTCCGGAGCTGACTATGCGCAAGCACATCATTGCCGCTATTCAGG 1963 Query 12021 CGCATGCTGCAGCTGAATATCCTCGTGAGTGCTGCGG--TG-TGGTGGCACAGAAGAGCC 12077 |||| || || || |||||||| || || |||||||| || || |||| | ||| Sbjct 1962 CGCACGCGGCGGCGGAATATCCGCGCGAATGCTGCGGGCTGCTGCTGGC---CGTGGGCC 1906 Query 12078 GGGTAGAGAAATATTTTCCATGTCGTAACCTCGCTACCGAGCCGACAGAACATTTTCACC 12137 | | |||| || || || || || ||| |||| || ||||||| ||| | || | | Sbjct 1905 GCGCTCAGAAGTACTTCCCGTGCCGGAACATCGCCACGGAGCCGAGCGAAGAGTTCAAGC 1846 Query 12138 TGTCGCCAGAAGACTATGCAGCTGCTGAGGACTGGGGTACGGTGATCGCCATCGTTCACA 12197 | || || | ||| || || || ||||||| ||| |||||||| || || ||| Sbjct 1845 TCGATCCCGAGGGCTACGCTGCGGCAGAGGACTTGGGCGAGGTGATCGGTATAGTCCACT 1786 Query 12198 GTCACCCTGACGCCAC 12213 ||||| ||||| || Sbjct 1785 CACACCCGGACGCAAC 1770 >seq3088451 Length=13260 Score = 95.1 bits (104), Expect = 3e-15 Identities = 203/299 (68%), Gaps = 6/299 (2%) Strand=Plus/Plus Query 11362 GCCGAAATTATCGCTGCTGGCGGTGATGAAAATAAACTGCCAGCAAAATCTATCTGGTGG 11421 || ||| | ||||| || ||||| | | | | |||||||| || || ||||||||| Sbjct 9167 GCTGAACTGATCGCCGCCGGCGGCAACGCTGACCAGCTGCCAGCGAAGTCGATCTGGTGG 9226 Query 11422 CAGGGTGAGGAGTATAAAGCGTGGCC-ATGCCAGATTGAGGGGATCGAAGCTTCAACCTC 11480 |||| || ||||| || ||||| |||| || ||||| | ||| || ||| | Sbjct 9227 AAGGGGGAAGAGTACGGCGCCTGGCCCATGC-AGTACGAGGGCAGCGAGGCG--AACGGC 9283 Query 11481 G--GGAAGTAGTGCCCAGCCGAAACTTTCGGTTGCTAACCTCGACAGTTCGATCACCGCG 11538 | || | | | |||||| |||||||||| ||| || || | ||||||||| Sbjct 9284 GACGGCACTGCGGTAAGGCCGAAGCTTTCGGTTGGCAACGTCAACGGGCGCATCACCGCG 9343 Query 11539 CTTTGCCTGGCTTACGACGATATGCTGCAGGCGAAGGTGACGATACATGACACCCTTGGT 11598 || |||||||| | ||| ||| |||| || ||| |||| || | | | || || | Sbjct 9344 CTCTGCCTGGCATTCGAGGATCTGCTTGAGTTCAAGCTGACAATTCGTAATACGCTGGCC 9403 Query 11599 AAGTATCTCGATGCGAGAAACTTCACCGGAGGCAATCCGACAGCCGATCCGACCCAGGA 11657 |||| || || || |||||| || ||||| || | |||||||| |||||||| Sbjct 9404 GAGTACCTGGACGCTGTGAACTTCGAAGGCGGCAACCCCGCGGCCGATCCCACCCAGGA 9462 >seq2884985 Length=308 Score = 93.3 bits (102), Expect = 1e-14 Identities = 168/244 (69%), Gaps = 14/244 (6%) Strand=Plus/Minus Query 17307 CGCGGGGATGGGTATCGGCGTGGAGAATACGCCATCCGGCATGCAGTCGCAGGTTATCTT 17366 |||||| || || | || ||||||| | | |||| ||||||||||| | ||| | Sbjct 291 CGCGGGTATCGGGCTTGGGTTGGAGAACGGGTCGGGCGGCCTGCAGTCGCAGTTCATCAT 232 Query 17367 CCTGGCTGATCGCTTCGCCGTCACCACGGCA-GCCGGTAACAGCGTGGCTTTGCCGTTTG 17425 | || || || |||||| || |||| ||||| || |||| || |||| Sbjct 231 CGACGCCGACCGGTTCGCCATCG----GGCAAGCCGG---CATCGTG------CCCTTTG 185 Query 17426 TGATCCAGAATGGACAGACATTCATCCGGGCCAGTTTCATCCAGGACGGCACTATCAGCA 17485 | | ||| ||| ||||| ||||| | |||||||||||||||||| |||| || Sbjct 184 CGGTACAGGGTGGGCAGACTTTCATTAAATCGGCTTTCATCCAGGACGGCACGATCACCA 125 Query 17486 ACGCAAAGATTGGTAATTTTATCCAGTCGAACAATTATGTTGCTGGTTCTGCTGGCTGGA 17545 |||| ||||| || || | |||||||| || || || | | ||| |||||||||| Sbjct 124 ACGCCAAGATCGGCAACTACATCCAGTCCAATAACTACGACCCAGGTAAGGCTGGCTGGA 65 Query 17546 AGCT 17549 |||| Sbjct 64 AGCT 61 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 125503383162966