Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_002167.1
Length=39732
Score E
Sequences producing significant alignments: (Bits) Value
seq3088379 1103 0.0
seq3087926 149 2e-31
seq3087822 120 7e-23
seq3088451 95.1 3e-15
seq3088057 91.5 4e-14
>seq3088379
Length=10556
Score = 1103 bits (1222), Expect = 0.0
Identities = 2163/3175 (68%), Gaps = 62/3175 (2%)
Strand=Plus/Plus
Query 2022 TCGACGACTTCATTTTCCGACCGCTGAGCATGTGATGGAAGAACCTAAATACACGATTGA 2081
||||||||||| | | | ||||| ||||||||| |||| ||| | | |||| || ||
Sbjct 2099 TCGACGACTTCCTCTCCAGACCGATGAGCATGTAATGGCAGATACCGACTACAGCATCGA 2158
Query 2082 CCTGCGAACCAATAACGGCTGGTGGGCAAGGCTGAAGTCCTGGTTTGTCGGCGGGCGTTT 2141
|||||| || | | ||||| | || | || ||||||||||| || |
Sbjct 2159 CCTGCGCACGCGCAGTCCATTCTGGGCGCGTATGGCGAGCTTCTTTGTCGGCGGCCGCCT 2218
Query 2142 AGTCACCCCAAATCAGGGCTCACAGACGGGGCCTGTTTCGGCCCACGGATACCTGGGCGA 2201
||||| || | | || |||||||| || || || || ||||| || |||| ||
Sbjct 2219 GGTCACACCTGAAAAAGGTTCACAGACAGGCCCAGTATCAGCCCAGGGTGTAGTGGGTGA 2278
Query 2202 TTCATCCATTAACGATGAACGGATACTGCAAATTTCGACTGTGTGGCGCT-GCGTGAGCC 2260
||| | | |||||||| || || || || |||| |||| |||| ||||| | |
Sbjct 2279 TTCGGTCGTAAACGATGAGCGCTCGCTCCAGATCGCGACCGTGTT-CGCTTGCGTGCGGC 2337
Query 2261 TGATTTCAACGCTCACGGCATGCTTACCGCTTGATGTCTTCGAAAC-AGACCAGAATGAC 2319
| || || | | || || ||| | || || || || ||| |||| | | ||| |||
Sbjct 2338 TTATCTCCAGCGTGACAGCTTGCATGCCACTGGACGTTTTCCAAACCAAAGGCGAA-GAC 2396
Query 2320 AACCGTAAAAAAGTGGATTTGAGCAATCCACTGGCGCGACTGCTGCGCTACTCACCGAAT 2379
| ||||| || | || || || ||||||||||| || ||| || ||
Sbjct 2397 AGG-GTAAAG--GTCGGGCTGGATAACCCGCTGGCGCGACTCCTTAAGTACCGCCCCAAC 2453
Query 2380 CAGTACATGACCGCCCAAGAATTCAGGGAGGCCATGACGATGCAGCTCTGTTTCTACGGT 2439
| | |||||| ||| || || | | ||||||||| |||||||| || | |||||
Sbjct 2454 GACTTCATGACTGCCTTTGATTTTCGTGTGGCCATGACTATGCAGCTTTGCTATTACGGC 2513
Query 2440 AACGCATATGCACTTGTGGACCGCAACAGCGCAGGTGACGTGATCAGCCTTCTCCCGCTT 2499
|| || || || || | || ||||| | || || ||||| ||||| || | |||||
Sbjct 2514 AATGCCTACGCGCTGATTGAGCGCAATGGGGCTGGGGACGTAATCAGTCTAGTGCCGCTC 2573
Query 2500 CAGTCTGCCAATATGGATGTGAAGCTCGTCGGaaaaaaaG-TGGTTTATCGCTATCAACG 2558
||||| || |||||||| ||| | || || | | ||||| || |||| ||
Sbjct 2574 ATGTCTGTGAACATGGATGTTC-GCTTGGAGGGTAAGCGGATCGTTTACCGATATCGCCG 2632
Query 2559 CGACAGCGAATACGCCGACTTTTCGCAGAAAGAGATTTTTCACCTTAAAGGCTTCGGATT 2618
||||| | | ||||| || || ||| | || ||||||||||| || || || || ||
Sbjct 2633 CGACACCAAGTACGCAGATTTCAAGCAAAGCGATATTTTTCACCTGAAGGGTTTTGGTTT 2692
Query 2619 CACCGGGCTTGTAGGCCTGTCACCCATTGCTTTTGCCTGTAAATCGGCAGGTGTGGCAGT 2678
| ||| || || ||||| || || |||||||| || || | || ||||| || ||
Sbjct 2693 TAACGGCCTGGTTGGCCTTTCGCCGATTGCTTTCGCAGCGAAGACCGCCGGTGTAGCCGT 2752
Query 2679 TGCGATGGAGGACCAGCAGCGAGATTTCTTTGCCAACGGCGCCAAGTCTCCGCAAATCCT 2738
||||||||| || |||||||| || || | ||||||||| |||||||| |||||| | ||
Sbjct 2753 TGCGATGGAAGATCAGCAGCGCGACTTTTATGCCAACGGTGCCAAGTCCCCGCAACTTCT 2812
Query 2739 CTCAACTGGCGA---AAAAGTGCTAACTGAACAGCAGCGCTCCCAGGTCGAAGAGAACTT 2795
|| || || ||| || || | | | ||||| | || ||||| ||||| ||
Sbjct 2813 TATGACAGGGGATGGAAAGGTTCTCAACAAGGATCAGCGGGCGCAAGTCGAGGAGAATTT 2872
Query 2796 CAAAGAGATCGCCGGCGGCCCGGTaaaaaaaCGCCTCTGGATTCTGGAAGCGGGTTTTTC 2855
||| ||||| ||||||| || || || || || |||||||| |||| | |||||| |
Sbjct 2873 CAAGGAGATATCCGGCGGGCCAGTCAAGAAGCGTCTCTGGATCTTGGAGGGAGGTTTTAC 2932
Query 2856 TACATCGGCAATTGGCGTAACTCCGCAGGATGCCGAAATGATGGCGTCCCGAAAATTTCA 2915
|| ||| || ||||| | ||||| || ||||| | ||||| || |||| || ||
Sbjct 2933 GACCCAGGCCATAGGCGTGAGCCCGCAAGACGCCGAGACAATGGCTGCCAGAAAGTTCCA 2992
Query 2916 GGTAAGTGAACTGGCGCGATTCTTTGGCGTACCGCCTCACCTTGTCGGCGACGTCGAGAA 2975
||| ||||| |||||||| ||||| ||||| ||||| || || || |||||||| || ||
Sbjct 2993 GGTGAGTGAGCTGGCGCGGTTCTTCGGCGTGCCGCCGCATCTGGTGGGCGACGTTGAAAA 3052
Query 2976 ATCAACGAGCTGGGGATCGGGCATCGAGCAGCAGAATCTCGGCTTCCTGCAGTACACGCT 3035
||||| |||||||| || || |||||||| ||||| || ||||| || |||||| ||||
Sbjct 3053 GTCAACCAGCTGGGGGTCAGGTATCGAGCAACAGAACCTGGGCTTTCTCCAGTACGCGCT 3112
Query 3036 GCAGCCCTATATCTCCCGGTGGGAAAACAGTATTCAGCGATGGCTGATCCCATCGAAAGA 3095
| || || | ||||| | | |||| ||||||||| | ||| ||
Sbjct 3113 CGACCCTTACCTTGAAATTTGGGAGGGCTGCATTCTGCGATGGCTTGTAAAGCCGAGCGA 3172
Query 3096 CGTTGGCCGCCTACATGCTGAGCACAATCTTGATGGTCTCCTGAGGGGCGATTCTGCCTC 3155
| | || | |||||||||||||| | || || | ||||| || || || || |
Sbjct 3173 CCTCGGGGTGTTCCATGCTGAGCACAACCGAGACGGGTTGCTGAGTGGTGACTCAACCGC 3232
Query 3156 CCGTGCCGCGTTCATGAAGGCAATGGGAGAGTCCGGCCTGCGTACCATCAACGAAATGCG 3215
||| || | | | || | || || |||| |||| || |||||| ||
Sbjct 3233 CCGCGCGAATTACCTAAAAACGTTGATTGATACCGGGCTGCTGACTCCCAACGAGGGCCG 3292
Query 3216 CCGAA-CAGACAACATGCCGCCATTACCGGGTGGCGATGTAGCGATGCGACAGGCGCAGT 3274
||| ||| ||| | |||| | || || ||||| || || | || || ||||
Sbjct 3293 GCGAGTCAG-CAATAGGCCGAAGCTGCCCGGCGGCGACGTCGCCACACGCCAATCGCAAA 3351
Query 3275 ATGTGCCAATT-ACCGACTTAGGAACCAACAAAGAGCCCCGAAA-TAACGGGGCTTAATT 3332
| ||||| || | | |||| | | ||||| ||||| | ||||| ||| ||
Sbjct 3352 ACGTGCCGCTTGATCAACTTGGTCA-----AAAGAACCCCGCCCCTGGCGGGGTTTAGTT 3406
Query 3333 TTTATGGGGGC-CGTGATGCCTGAAATCGTAAAAACGCTGTCCTTCGACGAGACAGAAAT 3391
||| ||| | | ||| | | || ||| || || | ||| |||||| ||||
Sbjct 3407 TTTCTGGAGCTACCCAATGGCAAATATTCAAAAGACCTTGGCGTTCACCGAGACTCAAAT 3466
Query 3392 CAAATTCACCGGTGACGGGAAGCAGGGGATTTTCGAAGGATATGCCTCTGTTTTTAATAA 3451
||| ||| || || || ||| || | ||||| || || ||| |||||| |
Sbjct 3467 CAAGTTCTCCTCGGATGGCAAGGTTGGTGTGTTCGAGGGGTACGCCAGTGTTTTCGACGT 3526
Query 3452 CACCGATTCCGATGGCGACATCATTCTGCCCGGGGCGTTTAAAAACGCGCTGGCGAACCA 3511
|| ||| || || ||||||||||| |||||||| || || || || || || | ||
Sbjct 3527 CATCGACTCAGACGGCGACATCATCCTGCCCGGCGCCTTCAAGAAGGCTTTGTCTTCGCA 3586
Query 3512 GACCCGAAAAGTGGCGATGTTTTTCAACCACAAGACGTGGGAGCTGCCGGTTGGTAAATG 3571
| ||| |||| | |||||||| ||||| |||| | | ||||| ||||| || ||
Sbjct 3587 AAGCCGCCAAGTCGGCATGTTTTTTAACCATCAGACCTACGGCCTGCCTGTTGGAAAGTG 3646
Query 3572 GGACAGTC--TGGCCGAAGACGAAAAAGGGCTCTACGTTCGCGGTCAACTTACCCCAGGA 3629
| ||||| |||| || ||| ||||| |||| |||| | || | || || || ||
Sbjct 3647 G--CAGTCGCTGGCGGAGGACAGCAAAGGACTCTTCGTTGGAGGCGAGCTGACGCCCGGT 3704
Query 3630 CACAGCGGCGCCGCCGACCTGAAAGCAGCAATGCAGCACGGCACGGTTGAGGGTATGTCG 3689
| | || |||||| ||||| ||| | || || || |||||| |||||
Sbjct 3705 TTGTCGGTCTCCAACGACCTCCGGGCAGCCATGGAACATAAGACCGTCGAGGGTTTGTCG 3764
Query 3690 GTTGGCTTTTCCGTTGCGAAAGACGATTACACCATCATTCCCACAGGCCGGATTTTTAAG 3749
|||||||| |||| || ||||||||| || |||| || ||||| || |
Sbjct 3765 GTTGGCTTCACCGTCCTCAAGGACGATTACGCCGTCATCGATACCGGCCGCGCATTCAGC 3824
Query 3750 AATATCCAGGCTCTGCGCGAAATCAGCGTCTGCACTTTCCCCGCCAACGAACAGGCTGGC 3809
||| ||||||| ||||| || |||||| | ||||| || || ||||| || ||||| |
Sbjct 3825 AATGTCCAGGCCCTGCGAGAGATCAGCATTTGCACCTTTCCTGCCAATGAGCAGGCGACC 3884
Query 3810 ATCGCAGCCATGAAAAGTGTCGATGGCATTGAA----ACGATCCGTGATGTGGAGAACTG 3865
|| | ||||||||||| |||| || || || || || ||||| ||| | ||
Sbjct 3885 ATTGACGCCATGAAAAGC----ATGGAATCGATCAGCACCATTCGCGATGTAGAGCATTG 3940
Query 3866 GCTGAGGGATTCAGTCGGCCTCACCAAATCACAGGCAGTTGGGCTAATAGCCCGGTTTAA 3925
|||||||||||| | ||| || | || || || || | || || ||||||||| | ||
Sbjct 3941 GCTGAGGGATTCGGCCGGTCTTTCGAAGTCGCAAGCCCTGGGCCTGATAGCCCGGATCAA 4000
Query 3926 GTCAGCGATTCGGAGCGAGTCCGAGGGCGACGGAAACGAAGCACAAATAAACGCTCTGCT 3985
||| || ||||||| || ||||| || | || |||| | ||| | ||
Sbjct 4001 GTCCGCAGTTCGGAGTGATTCCGAAGGTGGCG------------AAATCACCGCGATCCT 4048
Query 3986 TCAGAGCATCAAATCTTTCCCTTCTAACTTAGGTAAATAATT-ATGTCTGAACTCGCTCT 4044
| ||||||| || ||||| ||| |||| || ||| ||||| ||| | || |
Sbjct 4049 GGATCGCATCAAGTCATTCCCATCTG---TAGGAAATTAAACCATGTCCGAATTGGCCCA 4105
Query 4045 CATTCAAAAAGCTATCGAAGAATCCCAGCAGAAAATGACCCAGCTTTTCGATGCGCAGAA 4104
|||||||| || |||||| | || ||| ||||| |||| ||||| ||||| ||
Sbjct 4106 AATTCAAAAGGCAATCGAAACCGCGCAAACGAACATGACTGAGCTGTTCGAGGCGCAAAA 4165
Query 4105 AGCAGAAATCGAAAGCACAGGCCAGGTTTCCAAACAGTTGCAGTCCGACCTGATGAAAGT 4164
||| ||| ||| ||| | || ||| || | || |||||||| || |||
Sbjct 4166 GAAAGAGATCACCGCCACCGGCGAAGTGAGCAAGAAGATTCAAACCGACCTGCAGACAGT 4225
Query 4165 ACAGGAAGAGCTGACCAAATCCGGCACTCGCCTCTTCGATCTGGAACAGAAACTGGCATC 4224
||||| || |||| | ||||| | ||| | |||||||| || ||| || ||
Sbjct 4226 GCAGGACGAACTGAAAACGGCCGGCTCCCGCTTGTTCGATCTCGAGTCGAAGCTTGCCGG 4285
Query 4225 CGGCGCT---GAGAATCCTGGTGAGAAGAAATCCTTCTCTGAACGGGCTGCTGAAGAGCT 4281
|||| || || || |||| | |||||||| ||| |||| ||||| || ||||| ||
Sbjct 4286 CGGCACTCTCGATAACCCTGAAGCCAAGAAATCGTTCGCTGAGCGGGCGGCCGAAGATCT 4345
Query 4282 TATTAAGTCATGGGACGG---TAAACAGGGCACCTTTGGCGCTAAAACGTTTAACAAGTC 4338
| ||| ||| |||| || |||| | | || | | || | |||| |
Sbjct 4346 GAAGAAGGGCTGGAACGGCTCTACGTCCGGCAAAGTGGACGTGATTAGCTTCAGCAAGGC 4405
Query 4339 ACTAGGCAGTGACGCTGATTCGGCTGGCTCACTGATCCAGCCTATGCAGATCCCAGGCAT 4398
|| ||| | ||| | ||| ||||| | || ||||||| ||||| ||| |||||
Sbjct 4406 TCTCGGCGCAGGCGCCGCTTCTGCTGGTGCGTTGGTCCAGCCCCAGCAGAACCCCGGCAT 4465
Query 4399 CATCATGCCAGGCCTGCGCCGTCTTACCATTCGTGATCTGCTGGCTCAGGGCCGC---AC 4455
||||||| ||||||||||| || ||||| ||||| |||||||| || || ||| ||
Sbjct 4466 TCTCATGCCCGGCCTGCGCCGGCTGACCATCCGTGACCTGCTGGCGCAAGGTCGCACGAC 4525
Query 4456 TTCCAGTAACGCTCTGGAATATGTGCGTGAAGAGGTGTTTACCAATAACGCCGACGTGGT 4515
|||| |||| | || || ||||| || | || || | ||| | ||||| |||
Sbjct 4526 TTCC---GACGCCATCGAGTACGTGCGCGAGAACGTATTCATCAACAGCGCCGCTCCGGT 4582
Query 4516 GGCAGAGAAAGCACTGAAGCCAGAATCGGATATCACCTTCAGCAAACAAACCGCGAACGT 4575
|| ||| | |||||||| || || | | ||||||| ||| |||| || |||||
Sbjct 4583 CGCCGAGGGCACGCTGAAGCCCGAGTCCAACCTGACCTTCACCAAGGAAACGGCCAACGT 4642
Query 4576 GAAGACCATCGCGCACTGGGTGCAGGCATCACGTCAGGTGATGGATGATGCGCCAATGCT 4635
||||| | || |||||| | ||||| || || ||| | ||| ||| || || |||||
Sbjct 4643 CAAGACGCTGGCTCACTGGATTCAGGCTTCTCGCCAGATCATGTCTGACGCTCCGATGCT 4702
Query 4636 TCAGTCCTACATTAACAACCGCCTCATGTACGGCCTGGCACTGAAGGAAGAGGGCCAGCT 4695
| ||||| | ||| ||||| ||| || |||| || ||||| || |||||
Sbjct 4703 GGAATCCTATGTGAACGGTCGCCTGTTGTTTGGTCTGGACTTGGTCGAAGAAGGGCAGCT 4762
Query 4696 GCTGAACGGCGACGGTACCGGGGATAACCTGGAAGGGCTGAACAAAGTGGCAACCGCCTA 4755
|| |||||||| || ||||| || |||||| || ||||||||||| || ||||||||
Sbjct 4763 TCTCAACGGCGATGGCACCGGTGACAACCTGATCGGCCTGAACAAAGTCGCGACCGCCTA 4822
Query 4756 TGACACCTCGCTGAATGCCACCGGCGACACCCGCGCTGACATTATCGCTCACGCTATTTA 4815
||||| |||| ||||||||||||||||| ||||||||| || || ||||| || |
Sbjct 4823 CGACACTACGCTCAATGCCACCGGCGACACTCGCGCTGACCAGATTGCACACGCGATCTT 4882
Query 4816 TCAGGTGACCGAGTCTGAGTTCAGCGCTTCCGGTATCGTCCTGAACCCGCGCGACTGGCA 4875
||| | ||| || |||||| ||||| || | || ||||||| |||||||||||
Sbjct 4883 CCAGACCAGCGAATCCGAGTTCGAGGCTTCGGGCCTGATCTTGAACCCCCGCGACTGGCA 4942
Query 4876 CAACATCGCGTTGCTGAAAGACAATGAAGGCCGCTATATCTTCGGTGGTCCTCAGGCATT 4935
| ||||||| ||||||||||| ||| || || || ||||| || || ||| ||| ||
Sbjct 4943 CGCCATCGCGCTGCTGAAAGACGGTGATGGTCGTTACATCTTTGGCGGCCCTGCGGCGTT 5002
Query 4936 CACCAGTAACATCATGTGGGGCTTGCCAGTGGTTCCGACTAAGGCGCAGGCCGCCGGCAC 4995
| || || |||||||||| | || || ||| | || || || ||||| || ||
Sbjct 5003 CGCCGCCAAGGTCATGTGGGGGCTTCCTGTTGTTGCCACCAAAGCCCAGGCACAGGGAAC 5062
Query 4996 CTTTACCGTAGGCGGTTTCGATATGGCCTCACAGGTCTGGGATCGCATGGATGCCACCGT 5055
|| || || ||||| ||||| ||||| || ||| ||||||| |||||||| || || |
Sbjct 5063 TTTCACTGTTGGCGGCTTCGACATGGCTTCGCAGATCTGGGACCGCATGGACGCGACTAT 5122
Query 5056 GGAAGTTAGCCGTGAAGACCGCGATAACTTCGTGAAAAACATGCTGACCATCCTGTGCGA 5115
|| | ||| | || ||||| |||||||||||||||||||||||||||||||||||
Sbjct 5123 CGAGATCAGCAACCAGGATCGCGACAACTTCGTGAAAAACATGCTGACCATCCTGTGCGA 5182
Query 5116 AGAGCGTCTGGCGCTGGCGCATTATCGCCCGACAGCAATCATCAAGGGCACCTTC 5170
|||||| |||||| | | || ||||| || || ||||||||||| ||| | |||
Sbjct 5183 AGAGCGCCTGGCGGTTACCCACTATCGTCCTACCGCAATCATCAAAGGCGCTTTC 5237
>seq3087926
Length=6391
Score = 149 bits (164), Expect = 2e-31
Identities = 328/484 (68%), Gaps = 12/484 (2%)
Strand=Plus/Minus
Query 12687 GATCCGTCGCTGGATGAATGCAATGGCACGCTGACGGCCTGCAAACTCCGATTCGGCGAA 12746
|||||| | |||| | ||||| ||| ||| || ||||||| | |||||||||||
Sbjct 5396 GATCCGGCCAAGGATCAGTGCAAGGGCTGCCTGTCGTCCTGCAAGTTGCGATTCGGCGAG 5337
Query 12747 AATAACGAACTCTCGTTTGGTGGCTTCCCGGGCACGTCTTTGAT---CAGGAGTTGAT-A 12802
|| |||||||| || ||||| || ||||| | | |||| | || | |||| ||| |
Sbjct 5336 AACAACGAACTGTCCTTTGGCGGATTCCCCGCCGTGTCTCTCATTGCCCGGAGCTGACCA 5277
Query 12803 TGCGTCAGAAAACCATAGATGCGATTATGGCGCATGCTGCAGCTGAATATCCTCTTGAGT 12862
|||| || | | ||| | || || ||||||||| || | || ||||| | ||||
Sbjct 5276 TGCGCAAGCACATCATTGCGGCCATCCAGGCGCATGCGGCGACGGAGTATCCGCGAGAGT 5217
Query 12863 GTTGCGGCGTGGTGGCGCAGAAAAGCCGCGTTGAACGTTATTTCCCGTGCCGGAATCTTG 12922
| |||||| || || | |||||| | || |||||||||||||| | |
Sbjct 5216 GCTGCGGCCTGCTGTTGGCCGTGGGCCGCGCGCAGAAGTACTTCCCGTGCCGGAACATAG 5157
Query 12923 CCGCGGCGCCGGAGGACAATTTTGTCCTTTGCCCCGAAGACTACGCAGCTGCTGAGGACT 12982
|| || |||| | || | || ||| |||||| |||||||| || || || ||||
Sbjct 5156 CCAAGGAGCCGAACGAAGAGTTCCGGCTTGACCCCGAGGACTACGCCGCGGCGGAAGACT 5097
Query 12983 GGGGAACGGTGATCGCCATCGTTCACAGTCACCCTGACGCCACTACGCAGCCGAGCGAAC 13042
||| |||||||| |||||| ||| ||||| |||||||| | |||| | | ||
Sbjct 5096 TGGGCGAGGTGATCGGCATCGTCCACTCGCACCCGGACGCCACCA-GCAG--GCCCTCAC 5040
Query 13043 TGGATAA---AGCGCAATGCGACGCAACGCTTTTACCCTGGCATATTGTGAGCTGGCCGG 13099
| || | || || || || ||| ||| || ||||| || || ||||| |
Sbjct 5039 CGCATGACTTGGCCATGTGTGAGGCCACGGCTTTGCCATGGCACATCCTGTCTTGGCCCG 4980
Query 13100 AGGGGGATTTACGCACCATCCAGCC-GCGCGGAGAACTGCCGCTGCTGGAGCGTCCGTTT 13158
|||| || | ||||| || ||| ||| | || || ||||||||| |||| |||||
Sbjct 4979 AGGGTGACTGGCGCACGATTACGCCGGCGGGTAGCAC-GCCGCTGCTCAAGCGCCCGTTC 4921
Query 13159 GTGC 13162
||||
Sbjct 4920 GTGC 4917
>seq3087822
Length=6084
Score = 120 bits (132), Expect = 7e-23
Identities = 316/475 (67%), Gaps = 12/475 (3%)
Strand=Plus/Minus
Query 12694 CGCTGGATGAATGCAATGGCACGCTGACGGCCTGCAAACTCCGATTCGGCGAAAATAACG 12753
|||| || | ||||| ||| ||| || ||||||| | || ||||||||||| ||||
Sbjct 2105 CGCTTGACCAGTGCAAGGGCTGTCTGTCGTCCTGCAAGTTGCGCTTCGGCGAAAACAACG 2046
Query 12754 AACTCTCGTTTGGTGGCTTCCCGGGCACGTCTTTGA---TCAGGAGTTGA-TATGCGTCA 12809
|||| || || ||||| ||||| | | || ||| || |||| ||| |||||| |
Sbjct 2045 AACTGTCCTTCGGTGGATTCCCCGCCGTTTCCCTGATTGTCCGGAGCTGACTATGCGCAA 1986
Query 12810 GAAAACCATAGATGCGATTATGGCGCATGCTGCAGCTGAATATCCTCTTGAGTGTTGCGG 12869
| | | ||| | || ||| |||||| || || || |||||||| | || || |||||
Sbjct 1985 GCACATCATTGCCGCTATTCAGGCGCACGCGGCGGCGGAATATCCGCGCGAATGCTGCGG 1926
Query 12870 CGTGGTGGCGCAGAAAAGCCGCGTTGAACGTTATTTCCCGTGCCGGAATCTTGCCGCGGC 12929
|| || | |||||| | | || |||||||||||||| | ||| |||
Sbjct 1925 GCTGCTGCTGGCCGTGGGCCGCGCTCAGAAGTACTTCCCGTGCCGGAACATCGCCACGGA 1866
Query 12930 GCCGGAGGACAATTTTGTCCTTTGCCCCGAAGACTACGCAGCTGCTGAGGACTGGGGAAC 12989
|||| || | || || ||||| | |||||| || || ||||||| |||
Sbjct 1865 GCCGAGCGAAGAGTTCAAGCTCGATCCCGAGGGCTACGCTGCGGCAGAGGACTTGGGCGA 1806
Query 12990 GGTGATCGCCATCGTTCACAGTCACCCTGACGCCACTACGCAGCC---GAGCGAACTGGA 13046
|||||||| || || ||| ||||| ||||| || | || ||| | || || ||
Sbjct 1805 GGTGATCGGTATAGTCCACTCACACCCGGACGCAACCA-GCCGCCCATCACCGCAC--GA 1749
Query 13047 TAAAGCGCAATGCGACGCAACGCTTTTACCCTGGCATATTGTGAGCTGGCCGGAGGGGGA 13106
|| || || || ||| | |||||||||||| | ||||| ||||| ||
Sbjct 1748 CCTTGCCATGTGTGAGGCCACGGCCGTGCCCTGGCATATTCTCTCGTGGCCCGAGGGCGA 1689
Query 13107 TTTACGCACCATCCAGCC-GCGCGGAGAACTGCCGCTGCTGGAGCGTCCGTTTGT 13160
| ||||| ||| ||| || | | || ||||||||| |||| ||||| ||
Sbjct 1688 CATGCGCACGATCACGCCAACGGGCACCAC-GCCGCTGCTCAAGCGGCCGTTCGT 1635
>seq3088451
Length=13260
Score = 95.1 bits (104), Expect = 3e-15
Identities = 195/287 (68%), Gaps = 10/287 (3%)
Strand=Plus/Plus
Query 12901 TATTTCCCGTGCCGGAATCTTGCCGCGGCGCCGGAGGACAATTTTGTCCTTTGCCCCGAA 12960
||||||||||||||||| ||||| ||| ||| | || | || || ||||||
Sbjct 9892 TATTTCCCGTGCCGGAACATTGCCACGGAGCCAAACGAAGAGTTCCGGCTCGACCCCGAG 9951
Query 12961 GACTACGCAGCTGCTGAGGACTGGGGAACGGTGATCGCCATCGTTCACAGTCACCCTGAC 13020
|||||||| || || || ||| ||| |||||| | |||||| ||| || || |||
Sbjct 9952 GACTACGCCGCGGCGGAAGACCAGGGCCAGGTGATTGGCATCGTCCACTCGCATCCGGAC 10011
Query 13021 GCCACTACGCA-GCCG----AGCGAACTGGATAAAGCGCAATGCGACGCAACGCTTTTAC 13075
|| || | ||| |||| |||| || ||| || || || ||| ||| |
Sbjct 10012 GCAACCA-GCAGGCCGTCGTCGCGA----GACCTGGCGATGTGTGAGGCCACGACTTTGC 10066
Query 13076 CCTGGCATATTGTGAGCTGGCCGGAGGGGGATTTACGCACCATCCAGCCGCGCGGAGAAC 13135
||||||| ||| || |||||| ||||| || | ||||| ||| || ||| |
Sbjct 10067 CCTGGCACATTCTGTCCTGGCCCGAGGGCGACCTGCGCACGATCACTCCAACCGGCAACA 10126
Query 13136 TGCCGCTGCTGGAGCGTCCGTTTGTGCTTGGACACTTCGACTGCTGG 13182
|||||||||| ||| || ||||||| |||| | |||||||||
Sbjct 10127 CGCCGCTGCTGAGGCGCCCATTTGTGCATGGAGCATGGGACTGCTGG 10173
>seq3088057
Length=7030
Score = 91.5 bits (100), Expect = 4e-14
Identities = 199/297 (67%), Gaps = 12/297 (4%)
Strand=Plus/Plus
Query 15981 AACCCTGCGTGGATTTTTTACGACCTGGTTGTTT---CTGACCGGTTCGGCCTTGGGCAC 16037
|||||||||||| | ||||| |||||||| | || || | |||||| || |
Sbjct 5648 AACCCTGCGTGGGTGTTTTATGACCTGGTGCTGCACCCTTAC---TACGGCCTCGGCGAT 5704
Query 16038 CGTTTGACCGCTGCGAATATTGATAAATGGACGCTTTATCAGGTTGCTCAGTATTGTGAT 16097
|| | || ||| ||||| ||| ||||||||| | || || || || |||
Sbjct 5705 CGCATCGATGCCACGATGGTTGATCGCTGGTCGCTTTATCGCATCGCGCAATACTGCGAT 5764
Query 16098 CAGATGGTACCAGACGGCAAAGGGGGCAACGGTACAGAACCACGTTATACCTGCAACGTG 16157
|||||||| || || || ||||| ||| | || || || | |||||||||| ||
Sbjct 5765 CAGATGGTGCCGGATGGAAAAGG------CGGCATGGAGCCGCGCTTTACCTGCAACCTG 5818
Query 16158 TACATTCAGGACCGGAACGACGCCTACACAGTCCTGCGTGATTTTGCCGCTATCTTCCGT 16217
||| | || | | | ||| |||||| | || |||| ||| | || | ||||| |
Sbjct 5819 TACCTGCAAAAGCAGGCCGAGGCCTACGCGGTGCTGCAGGATCTGGCATCGATCTTTCAC 5878
Query 16218 GGCATGACCTACTGGGGCGGGGATCAGATTGTGGCCCTGGCTGACATGCCGCGCGAT 16274
|| || ||||||||| ||| ||||| |||| | || || |||||| |||||
Sbjct 5879 GGTCTGGCCTACTGGGACGGCAGCCAGATCGTGGTCAACGCCGATATGCCGGGCGAT 5935
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 122362176485908
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