Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09] 3,088,511 sequences; 2,785,377,831 total letters Query= NC_002167.1 Length=39732 Score E Sequences producing significant alignments: (Bits) Value seq3088379 1103 0.0 seq3087926 149 2e-31 seq3087822 120 7e-23 seq3088451 95.1 3e-15 seq3088057 91.5 4e-14 >seq3088379 Length=10556 Score = 1103 bits (1222), Expect = 0.0 Identities = 2163/3175 (68%), Gaps = 62/3175 (2%) Strand=Plus/Plus Query 2022 TCGACGACTTCATTTTCCGACCGCTGAGCATGTGATGGAAGAACCTAAATACACGATTGA 2081 ||||||||||| | | | ||||| ||||||||| |||| ||| | | |||| || || Sbjct 2099 TCGACGACTTCCTCTCCAGACCGATGAGCATGTAATGGCAGATACCGACTACAGCATCGA 2158 Query 2082 CCTGCGAACCAATAACGGCTGGTGGGCAAGGCTGAAGTCCTGGTTTGTCGGCGGGCGTTT 2141 |||||| || | | ||||| | || | || ||||||||||| || | Sbjct 2159 CCTGCGCACGCGCAGTCCATTCTGGGCGCGTATGGCGAGCTTCTTTGTCGGCGGCCGCCT 2218 Query 2142 AGTCACCCCAAATCAGGGCTCACAGACGGGGCCTGTTTCGGCCCACGGATACCTGGGCGA 2201 ||||| || | | || |||||||| || || || || ||||| || |||| || Sbjct 2219 GGTCACACCTGAAAAAGGTTCACAGACAGGCCCAGTATCAGCCCAGGGTGTAGTGGGTGA 2278 Query 2202 TTCATCCATTAACGATGAACGGATACTGCAAATTTCGACTGTGTGGCGCT-GCGTGAGCC 2260 ||| | | |||||||| || || || || |||| |||| |||| ||||| | | Sbjct 2279 TTCGGTCGTAAACGATGAGCGCTCGCTCCAGATCGCGACCGTGTT-CGCTTGCGTGCGGC 2337 Query 2261 TGATTTCAACGCTCACGGCATGCTTACCGCTTGATGTCTTCGAAAC-AGACCAGAATGAC 2319 | || || | | || || ||| | || || || || ||| |||| | | ||| ||| Sbjct 2338 TTATCTCCAGCGTGACAGCTTGCATGCCACTGGACGTTTTCCAAACCAAAGGCGAA-GAC 2396 Query 2320 AACCGTAAAAAAGTGGATTTGAGCAATCCACTGGCGCGACTGCTGCGCTACTCACCGAAT 2379 | ||||| || | || || || ||||||||||| || ||| || || Sbjct 2397 AGG-GTAAAG--GTCGGGCTGGATAACCCGCTGGCGCGACTCCTTAAGTACCGCCCCAAC 2453 Query 2380 CAGTACATGACCGCCCAAGAATTCAGGGAGGCCATGACGATGCAGCTCTGTTTCTACGGT 2439 | | |||||| ||| || || | | ||||||||| |||||||| || | ||||| Sbjct 2454 GACTTCATGACTGCCTTTGATTTTCGTGTGGCCATGACTATGCAGCTTTGCTATTACGGC 2513 Query 2440 AACGCATATGCACTTGTGGACCGCAACAGCGCAGGTGACGTGATCAGCCTTCTCCCGCTT 2499 || || || || || | || ||||| | || || ||||| ||||| || | ||||| Sbjct 2514 AATGCCTACGCGCTGATTGAGCGCAATGGGGCTGGGGACGTAATCAGTCTAGTGCCGCTC 2573 Query 2500 CAGTCTGCCAATATGGATGTGAAGCTCGTCGGaaaaaaaG-TGGTTTATCGCTATCAACG 2558 ||||| || |||||||| ||| | || || | | ||||| || |||| || Sbjct 2574 ATGTCTGTGAACATGGATGTTC-GCTTGGAGGGTAAGCGGATCGTTTACCGATATCGCCG 2632 Query 2559 CGACAGCGAATACGCCGACTTTTCGCAGAAAGAGATTTTTCACCTTAAAGGCTTCGGATT 2618 ||||| | | ||||| || || ||| | || ||||||||||| || || || || || Sbjct 2633 CGACACCAAGTACGCAGATTTCAAGCAAAGCGATATTTTTCACCTGAAGGGTTTTGGTTT 2692 Query 2619 CACCGGGCTTGTAGGCCTGTCACCCATTGCTTTTGCCTGTAAATCGGCAGGTGTGGCAGT 2678 | ||| || || ||||| || || |||||||| || || | || ||||| || || Sbjct 2693 TAACGGCCTGGTTGGCCTTTCGCCGATTGCTTTCGCAGCGAAGACCGCCGGTGTAGCCGT 2752 Query 2679 TGCGATGGAGGACCAGCAGCGAGATTTCTTTGCCAACGGCGCCAAGTCTCCGCAAATCCT 2738 ||||||||| || |||||||| || || | ||||||||| |||||||| |||||| | || Sbjct 2753 TGCGATGGAAGATCAGCAGCGCGACTTTTATGCCAACGGTGCCAAGTCCCCGCAACTTCT 2812 Query 2739 CTCAACTGGCGA---AAAAGTGCTAACTGAACAGCAGCGCTCCCAGGTCGAAGAGAACTT 2795 || || || ||| || || | | | ||||| | || ||||| ||||| || Sbjct 2813 TATGACAGGGGATGGAAAGGTTCTCAACAAGGATCAGCGGGCGCAAGTCGAGGAGAATTT 2872 Query 2796 CAAAGAGATCGCCGGCGGCCCGGTaaaaaaaCGCCTCTGGATTCTGGAAGCGGGTTTTTC 2855 ||| ||||| ||||||| || || || || || |||||||| |||| | |||||| | Sbjct 2873 CAAGGAGATATCCGGCGGGCCAGTCAAGAAGCGTCTCTGGATCTTGGAGGGAGGTTTTAC 2932 Query 2856 TACATCGGCAATTGGCGTAACTCCGCAGGATGCCGAAATGATGGCGTCCCGAAAATTTCA 2915 || ||| || ||||| | ||||| || ||||| | ||||| || |||| || || Sbjct 2933 GACCCAGGCCATAGGCGTGAGCCCGCAAGACGCCGAGACAATGGCTGCCAGAAAGTTCCA 2992 Query 2916 GGTAAGTGAACTGGCGCGATTCTTTGGCGTACCGCCTCACCTTGTCGGCGACGTCGAGAA 2975 ||| ||||| |||||||| ||||| ||||| ||||| || || || |||||||| || || Sbjct 2993 GGTGAGTGAGCTGGCGCGGTTCTTCGGCGTGCCGCCGCATCTGGTGGGCGACGTTGAAAA 3052 Query 2976 ATCAACGAGCTGGGGATCGGGCATCGAGCAGCAGAATCTCGGCTTCCTGCAGTACACGCT 3035 ||||| |||||||| || || |||||||| ||||| || ||||| || |||||| |||| Sbjct 3053 GTCAACCAGCTGGGGGTCAGGTATCGAGCAACAGAACCTGGGCTTTCTCCAGTACGCGCT 3112 Query 3036 GCAGCCCTATATCTCCCGGTGGGAAAACAGTATTCAGCGATGGCTGATCCCATCGAAAGA 3095 | || || | ||||| | | |||| ||||||||| | ||| || Sbjct 3113 CGACCCTTACCTTGAAATTTGGGAGGGCTGCATTCTGCGATGGCTTGTAAAGCCGAGCGA 3172 Query 3096 CGTTGGCCGCCTACATGCTGAGCACAATCTTGATGGTCTCCTGAGGGGCGATTCTGCCTC 3155 | | || | |||||||||||||| | || || | ||||| || || || || | Sbjct 3173 CCTCGGGGTGTTCCATGCTGAGCACAACCGAGACGGGTTGCTGAGTGGTGACTCAACCGC 3232 Query 3156 CCGTGCCGCGTTCATGAAGGCAATGGGAGAGTCCGGCCTGCGTACCATCAACGAAATGCG 3215 ||| || | | | || | || || |||| |||| || |||||| || Sbjct 3233 CCGCGCGAATTACCTAAAAACGTTGATTGATACCGGGCTGCTGACTCCCAACGAGGGCCG 3292 Query 3216 CCGAA-CAGACAACATGCCGCCATTACCGGGTGGCGATGTAGCGATGCGACAGGCGCAGT 3274 ||| ||| ||| | |||| | || || ||||| || || | || || |||| Sbjct 3293 GCGAGTCAG-CAATAGGCCGAAGCTGCCCGGCGGCGACGTCGCCACACGCCAATCGCAAA 3351 Query 3275 ATGTGCCAATT-ACCGACTTAGGAACCAACAAAGAGCCCCGAAA-TAACGGGGCTTAATT 3332 | ||||| || | | |||| | | ||||| ||||| | ||||| ||| || Sbjct 3352 ACGTGCCGCTTGATCAACTTGGTCA-----AAAGAACCCCGCCCCTGGCGGGGTTTAGTT 3406 Query 3333 TTTATGGGGGC-CGTGATGCCTGAAATCGTAAAAACGCTGTCCTTCGACGAGACAGAAAT 3391 ||| ||| | | ||| | | || ||| || || | ||| |||||| |||| Sbjct 3407 TTTCTGGAGCTACCCAATGGCAAATATTCAAAAGACCTTGGCGTTCACCGAGACTCAAAT 3466 Query 3392 CAAATTCACCGGTGACGGGAAGCAGGGGATTTTCGAAGGATATGCCTCTGTTTTTAATAA 3451 ||| ||| || || || ||| || | ||||| || || ||| |||||| | Sbjct 3467 CAAGTTCTCCTCGGATGGCAAGGTTGGTGTGTTCGAGGGGTACGCCAGTGTTTTCGACGT 3526 Query 3452 CACCGATTCCGATGGCGACATCATTCTGCCCGGGGCGTTTAAAAACGCGCTGGCGAACCA 3511 || ||| || || ||||||||||| |||||||| || || || || || || | || Sbjct 3527 CATCGACTCAGACGGCGACATCATCCTGCCCGGCGCCTTCAAGAAGGCTTTGTCTTCGCA 3586 Query 3512 GACCCGAAAAGTGGCGATGTTTTTCAACCACAAGACGTGGGAGCTGCCGGTTGGTAAATG 3571 | ||| |||| | |||||||| ||||| |||| | | ||||| ||||| || || Sbjct 3587 AAGCCGCCAAGTCGGCATGTTTTTTAACCATCAGACCTACGGCCTGCCTGTTGGAAAGTG 3646 Query 3572 GGACAGTC--TGGCCGAAGACGAAAAAGGGCTCTACGTTCGCGGTCAACTTACCCCAGGA 3629 | ||||| |||| || ||| ||||| |||| |||| | || | || || || || Sbjct 3647 G--CAGTCGCTGGCGGAGGACAGCAAAGGACTCTTCGTTGGAGGCGAGCTGACGCCCGGT 3704 Query 3630 CACAGCGGCGCCGCCGACCTGAAAGCAGCAATGCAGCACGGCACGGTTGAGGGTATGTCG 3689 | | || |||||| ||||| ||| | || || || |||||| ||||| Sbjct 3705 TTGTCGGTCTCCAACGACCTCCGGGCAGCCATGGAACATAAGACCGTCGAGGGTTTGTCG 3764 Query 3690 GTTGGCTTTTCCGTTGCGAAAGACGATTACACCATCATTCCCACAGGCCGGATTTTTAAG 3749 |||||||| |||| || ||||||||| || |||| || ||||| || | Sbjct 3765 GTTGGCTTCACCGTCCTCAAGGACGATTACGCCGTCATCGATACCGGCCGCGCATTCAGC 3824 Query 3750 AATATCCAGGCTCTGCGCGAAATCAGCGTCTGCACTTTCCCCGCCAACGAACAGGCTGGC 3809 ||| ||||||| ||||| || |||||| | ||||| || || ||||| || ||||| | Sbjct 3825 AATGTCCAGGCCCTGCGAGAGATCAGCATTTGCACCTTTCCTGCCAATGAGCAGGCGACC 3884 Query 3810 ATCGCAGCCATGAAAAGTGTCGATGGCATTGAA----ACGATCCGTGATGTGGAGAACTG 3865 || | ||||||||||| |||| || || || || || ||||| ||| | || Sbjct 3885 ATTGACGCCATGAAAAGC----ATGGAATCGATCAGCACCATTCGCGATGTAGAGCATTG 3940 Query 3866 GCTGAGGGATTCAGTCGGCCTCACCAAATCACAGGCAGTTGGGCTAATAGCCCGGTTTAA 3925 |||||||||||| | ||| || | || || || || | || || ||||||||| | || Sbjct 3941 GCTGAGGGATTCGGCCGGTCTTTCGAAGTCGCAAGCCCTGGGCCTGATAGCCCGGATCAA 4000 Query 3926 GTCAGCGATTCGGAGCGAGTCCGAGGGCGACGGAAACGAAGCACAAATAAACGCTCTGCT 3985 ||| || ||||||| || ||||| || | || |||| | ||| | || Sbjct 4001 GTCCGCAGTTCGGAGTGATTCCGAAGGTGGCG------------AAATCACCGCGATCCT 4048 Query 3986 TCAGAGCATCAAATCTTTCCCTTCTAACTTAGGTAAATAATT-ATGTCTGAACTCGCTCT 4044 | ||||||| || ||||| ||| |||| || ||| ||||| ||| | || | Sbjct 4049 GGATCGCATCAAGTCATTCCCATCTG---TAGGAAATTAAACCATGTCCGAATTGGCCCA 4105 Query 4045 CATTCAAAAAGCTATCGAAGAATCCCAGCAGAAAATGACCCAGCTTTTCGATGCGCAGAA 4104 |||||||| || |||||| | || ||| ||||| |||| ||||| ||||| || Sbjct 4106 AATTCAAAAGGCAATCGAAACCGCGCAAACGAACATGACTGAGCTGTTCGAGGCGCAAAA 4165 Query 4105 AGCAGAAATCGAAAGCACAGGCCAGGTTTCCAAACAGTTGCAGTCCGACCTGATGAAAGT 4164 ||| ||| ||| ||| | || ||| || | || |||||||| || ||| Sbjct 4166 GAAAGAGATCACCGCCACCGGCGAAGTGAGCAAGAAGATTCAAACCGACCTGCAGACAGT 4225 Query 4165 ACAGGAAGAGCTGACCAAATCCGGCACTCGCCTCTTCGATCTGGAACAGAAACTGGCATC 4224 ||||| || |||| | ||||| | ||| | |||||||| || ||| || || Sbjct 4226 GCAGGACGAACTGAAAACGGCCGGCTCCCGCTTGTTCGATCTCGAGTCGAAGCTTGCCGG 4285 Query 4225 CGGCGCT---GAGAATCCTGGTGAGAAGAAATCCTTCTCTGAACGGGCTGCTGAAGAGCT 4281 |||| || || || |||| | |||||||| ||| |||| ||||| || ||||| || Sbjct 4286 CGGCACTCTCGATAACCCTGAAGCCAAGAAATCGTTCGCTGAGCGGGCGGCCGAAGATCT 4345 Query 4282 TATTAAGTCATGGGACGG---TAAACAGGGCACCTTTGGCGCTAAAACGTTTAACAAGTC 4338 | ||| ||| |||| || |||| | | || | | || | |||| | Sbjct 4346 GAAGAAGGGCTGGAACGGCTCTACGTCCGGCAAAGTGGACGTGATTAGCTTCAGCAAGGC 4405 Query 4339 ACTAGGCAGTGACGCTGATTCGGCTGGCTCACTGATCCAGCCTATGCAGATCCCAGGCAT 4398 || ||| | ||| | ||| ||||| | || ||||||| ||||| ||| ||||| Sbjct 4406 TCTCGGCGCAGGCGCCGCTTCTGCTGGTGCGTTGGTCCAGCCCCAGCAGAACCCCGGCAT 4465 Query 4399 CATCATGCCAGGCCTGCGCCGTCTTACCATTCGTGATCTGCTGGCTCAGGGCCGC---AC 4455 ||||||| ||||||||||| || ||||| ||||| |||||||| || || ||| || Sbjct 4466 TCTCATGCCCGGCCTGCGCCGGCTGACCATCCGTGACCTGCTGGCGCAAGGTCGCACGAC 4525 Query 4456 TTCCAGTAACGCTCTGGAATATGTGCGTGAAGAGGTGTTTACCAATAACGCCGACGTGGT 4515 |||| |||| | || || ||||| || | || || | ||| | ||||| ||| Sbjct 4526 TTCC---GACGCCATCGAGTACGTGCGCGAGAACGTATTCATCAACAGCGCCGCTCCGGT 4582 Query 4516 GGCAGAGAAAGCACTGAAGCCAGAATCGGATATCACCTTCAGCAAACAAACCGCGAACGT 4575 || ||| | |||||||| || || | | ||||||| ||| |||| || ||||| Sbjct 4583 CGCCGAGGGCACGCTGAAGCCCGAGTCCAACCTGACCTTCACCAAGGAAACGGCCAACGT 4642 Query 4576 GAAGACCATCGCGCACTGGGTGCAGGCATCACGTCAGGTGATGGATGATGCGCCAATGCT 4635 ||||| | || |||||| | ||||| || || ||| | ||| ||| || || ||||| Sbjct 4643 CAAGACGCTGGCTCACTGGATTCAGGCTTCTCGCCAGATCATGTCTGACGCTCCGATGCT 4702 Query 4636 TCAGTCCTACATTAACAACCGCCTCATGTACGGCCTGGCACTGAAGGAAGAGGGCCAGCT 4695 | ||||| | ||| ||||| ||| || |||| || ||||| || ||||| Sbjct 4703 GGAATCCTATGTGAACGGTCGCCTGTTGTTTGGTCTGGACTTGGTCGAAGAAGGGCAGCT 4762 Query 4696 GCTGAACGGCGACGGTACCGGGGATAACCTGGAAGGGCTGAACAAAGTGGCAACCGCCTA 4755 || |||||||| || ||||| || |||||| || ||||||||||| || |||||||| Sbjct 4763 TCTCAACGGCGATGGCACCGGTGACAACCTGATCGGCCTGAACAAAGTCGCGACCGCCTA 4822 Query 4756 TGACACCTCGCTGAATGCCACCGGCGACACCCGCGCTGACATTATCGCTCACGCTATTTA 4815 ||||| |||| ||||||||||||||||| ||||||||| || || ||||| || | Sbjct 4823 CGACACTACGCTCAATGCCACCGGCGACACTCGCGCTGACCAGATTGCACACGCGATCTT 4882 Query 4816 TCAGGTGACCGAGTCTGAGTTCAGCGCTTCCGGTATCGTCCTGAACCCGCGCGACTGGCA 4875 ||| | ||| || |||||| ||||| || | || ||||||| ||||||||||| Sbjct 4883 CCAGACCAGCGAATCCGAGTTCGAGGCTTCGGGCCTGATCTTGAACCCCCGCGACTGGCA 4942 Query 4876 CAACATCGCGTTGCTGAAAGACAATGAAGGCCGCTATATCTTCGGTGGTCCTCAGGCATT 4935 | ||||||| ||||||||||| ||| || || || ||||| || || ||| ||| || Sbjct 4943 CGCCATCGCGCTGCTGAAAGACGGTGATGGTCGTTACATCTTTGGCGGCCCTGCGGCGTT 5002 Query 4936 CACCAGTAACATCATGTGGGGCTTGCCAGTGGTTCCGACTAAGGCGCAGGCCGCCGGCAC 4995 | || || |||||||||| | || || ||| | || || || ||||| || || Sbjct 5003 CGCCGCCAAGGTCATGTGGGGGCTTCCTGTTGTTGCCACCAAAGCCCAGGCACAGGGAAC 5062 Query 4996 CTTTACCGTAGGCGGTTTCGATATGGCCTCACAGGTCTGGGATCGCATGGATGCCACCGT 5055 || || || ||||| ||||| ||||| || ||| ||||||| |||||||| || || | Sbjct 5063 TTTCACTGTTGGCGGCTTCGACATGGCTTCGCAGATCTGGGACCGCATGGACGCGACTAT 5122 Query 5056 GGAAGTTAGCCGTGAAGACCGCGATAACTTCGTGAAAAACATGCTGACCATCCTGTGCGA 5115 || | ||| | || ||||| ||||||||||||||||||||||||||||||||||| Sbjct 5123 CGAGATCAGCAACCAGGATCGCGACAACTTCGTGAAAAACATGCTGACCATCCTGTGCGA 5182 Query 5116 AGAGCGTCTGGCGCTGGCGCATTATCGCCCGACAGCAATCATCAAGGGCACCTTC 5170 |||||| |||||| | | || ||||| || || ||||||||||| ||| | ||| Sbjct 5183 AGAGCGCCTGGCGGTTACCCACTATCGTCCTACCGCAATCATCAAAGGCGCTTTC 5237 >seq3087926 Length=6391 Score = 149 bits (164), Expect = 2e-31 Identities = 328/484 (68%), Gaps = 12/484 (2%) Strand=Plus/Minus Query 12687 GATCCGTCGCTGGATGAATGCAATGGCACGCTGACGGCCTGCAAACTCCGATTCGGCGAA 12746 |||||| | |||| | ||||| ||| ||| || ||||||| | ||||||||||| Sbjct 5396 GATCCGGCCAAGGATCAGTGCAAGGGCTGCCTGTCGTCCTGCAAGTTGCGATTCGGCGAG 5337 Query 12747 AATAACGAACTCTCGTTTGGTGGCTTCCCGGGCACGTCTTTGAT---CAGGAGTTGAT-A 12802 || |||||||| || ||||| || ||||| | | |||| | || | |||| ||| | Sbjct 5336 AACAACGAACTGTCCTTTGGCGGATTCCCCGCCGTGTCTCTCATTGCCCGGAGCTGACCA 5277 Query 12803 TGCGTCAGAAAACCATAGATGCGATTATGGCGCATGCTGCAGCTGAATATCCTCTTGAGT 12862 |||| || | | ||| | || || ||||||||| || | || ||||| | |||| Sbjct 5276 TGCGCAAGCACATCATTGCGGCCATCCAGGCGCATGCGGCGACGGAGTATCCGCGAGAGT 5217 Query 12863 GTTGCGGCGTGGTGGCGCAGAAAAGCCGCGTTGAACGTTATTTCCCGTGCCGGAATCTTG 12922 | |||||| || || | |||||| | || |||||||||||||| | | Sbjct 5216 GCTGCGGCCTGCTGTTGGCCGTGGGCCGCGCGCAGAAGTACTTCCCGTGCCGGAACATAG 5157 Query 12923 CCGCGGCGCCGGAGGACAATTTTGTCCTTTGCCCCGAAGACTACGCAGCTGCTGAGGACT 12982 || || |||| | || | || ||| |||||| |||||||| || || || |||| Sbjct 5156 CCAAGGAGCCGAACGAAGAGTTCCGGCTTGACCCCGAGGACTACGCCGCGGCGGAAGACT 5097 Query 12983 GGGGAACGGTGATCGCCATCGTTCACAGTCACCCTGACGCCACTACGCAGCCGAGCGAAC 13042 ||| |||||||| |||||| ||| ||||| |||||||| | |||| | | || Sbjct 5096 TGGGCGAGGTGATCGGCATCGTCCACTCGCACCCGGACGCCACCA-GCAG--GCCCTCAC 5040 Query 13043 TGGATAA---AGCGCAATGCGACGCAACGCTTTTACCCTGGCATATTGTGAGCTGGCCGG 13099 | || | || || || || ||| ||| || ||||| || || ||||| | Sbjct 5039 CGCATGACTTGGCCATGTGTGAGGCCACGGCTTTGCCATGGCACATCCTGTCTTGGCCCG 4980 Query 13100 AGGGGGATTTACGCACCATCCAGCC-GCGCGGAGAACTGCCGCTGCTGGAGCGTCCGTTT 13158 |||| || | ||||| || ||| ||| | || || ||||||||| |||| ||||| Sbjct 4979 AGGGTGACTGGCGCACGATTACGCCGGCGGGTAGCAC-GCCGCTGCTCAAGCGCCCGTTC 4921 Query 13159 GTGC 13162 |||| Sbjct 4920 GTGC 4917 >seq3087822 Length=6084 Score = 120 bits (132), Expect = 7e-23 Identities = 316/475 (67%), Gaps = 12/475 (3%) Strand=Plus/Minus Query 12694 CGCTGGATGAATGCAATGGCACGCTGACGGCCTGCAAACTCCGATTCGGCGAAAATAACG 12753 |||| || | ||||| ||| ||| || ||||||| | || ||||||||||| |||| Sbjct 2105 CGCTTGACCAGTGCAAGGGCTGTCTGTCGTCCTGCAAGTTGCGCTTCGGCGAAAACAACG 2046 Query 12754 AACTCTCGTTTGGTGGCTTCCCGGGCACGTCTTTGA---TCAGGAGTTGA-TATGCGTCA 12809 |||| || || ||||| ||||| | | || ||| || |||| ||| |||||| | Sbjct 2045 AACTGTCCTTCGGTGGATTCCCCGCCGTTTCCCTGATTGTCCGGAGCTGACTATGCGCAA 1986 Query 12810 GAAAACCATAGATGCGATTATGGCGCATGCTGCAGCTGAATATCCTCTTGAGTGTTGCGG 12869 | | | ||| | || ||| |||||| || || || |||||||| | || || ||||| Sbjct 1985 GCACATCATTGCCGCTATTCAGGCGCACGCGGCGGCGGAATATCCGCGCGAATGCTGCGG 1926 Query 12870 CGTGGTGGCGCAGAAAAGCCGCGTTGAACGTTATTTCCCGTGCCGGAATCTTGCCGCGGC 12929 || || | |||||| | | || |||||||||||||| | ||| ||| Sbjct 1925 GCTGCTGCTGGCCGTGGGCCGCGCTCAGAAGTACTTCCCGTGCCGGAACATCGCCACGGA 1866 Query 12930 GCCGGAGGACAATTTTGTCCTTTGCCCCGAAGACTACGCAGCTGCTGAGGACTGGGGAAC 12989 |||| || | || || ||||| | |||||| || || ||||||| ||| Sbjct 1865 GCCGAGCGAAGAGTTCAAGCTCGATCCCGAGGGCTACGCTGCGGCAGAGGACTTGGGCGA 1806 Query 12990 GGTGATCGCCATCGTTCACAGTCACCCTGACGCCACTACGCAGCC---GAGCGAACTGGA 13046 |||||||| || || ||| ||||| ||||| || | || ||| | || || || Sbjct 1805 GGTGATCGGTATAGTCCACTCACACCCGGACGCAACCA-GCCGCCCATCACCGCAC--GA 1749 Query 13047 TAAAGCGCAATGCGACGCAACGCTTTTACCCTGGCATATTGTGAGCTGGCCGGAGGGGGA 13106 || || || || ||| | |||||||||||| | ||||| ||||| || Sbjct 1748 CCTTGCCATGTGTGAGGCCACGGCCGTGCCCTGGCATATTCTCTCGTGGCCCGAGGGCGA 1689 Query 13107 TTTACGCACCATCCAGCC-GCGCGGAGAACTGCCGCTGCTGGAGCGTCCGTTTGT 13160 | ||||| ||| ||| || | | || ||||||||| |||| ||||| || Sbjct 1688 CATGCGCACGATCACGCCAACGGGCACCAC-GCCGCTGCTCAAGCGGCCGTTCGT 1635 >seq3088451 Length=13260 Score = 95.1 bits (104), Expect = 3e-15 Identities = 195/287 (68%), Gaps = 10/287 (3%) Strand=Plus/Plus Query 12901 TATTTCCCGTGCCGGAATCTTGCCGCGGCGCCGGAGGACAATTTTGTCCTTTGCCCCGAA 12960 ||||||||||||||||| ||||| ||| ||| | || | || || |||||| Sbjct 9892 TATTTCCCGTGCCGGAACATTGCCACGGAGCCAAACGAAGAGTTCCGGCTCGACCCCGAG 9951 Query 12961 GACTACGCAGCTGCTGAGGACTGGGGAACGGTGATCGCCATCGTTCACAGTCACCCTGAC 13020 |||||||| || || || ||| ||| |||||| | |||||| ||| || || ||| Sbjct 9952 GACTACGCCGCGGCGGAAGACCAGGGCCAGGTGATTGGCATCGTCCACTCGCATCCGGAC 10011 Query 13021 GCCACTACGCA-GCCG----AGCGAACTGGATAAAGCGCAATGCGACGCAACGCTTTTAC 13075 || || | ||| |||| |||| || ||| || || || ||| ||| | Sbjct 10012 GCAACCA-GCAGGCCGTCGTCGCGA----GACCTGGCGATGTGTGAGGCCACGACTTTGC 10066 Query 13076 CCTGGCATATTGTGAGCTGGCCGGAGGGGGATTTACGCACCATCCAGCCGCGCGGAGAAC 13135 ||||||| ||| || |||||| ||||| || | ||||| ||| || ||| | Sbjct 10067 CCTGGCACATTCTGTCCTGGCCCGAGGGCGACCTGCGCACGATCACTCCAACCGGCAACA 10126 Query 13136 TGCCGCTGCTGGAGCGTCCGTTTGTGCTTGGACACTTCGACTGCTGG 13182 |||||||||| ||| || ||||||| |||| | ||||||||| Sbjct 10127 CGCCGCTGCTGAGGCGCCCATTTGTGCATGGAGCATGGGACTGCTGG 10173 >seq3088057 Length=7030 Score = 91.5 bits (100), Expect = 4e-14 Identities = 199/297 (67%), Gaps = 12/297 (4%) Strand=Plus/Plus Query 15981 AACCCTGCGTGGATTTTTTACGACCTGGTTGTTT---CTGACCGGTTCGGCCTTGGGCAC 16037 |||||||||||| | ||||| |||||||| | || || | |||||| || | Sbjct 5648 AACCCTGCGTGGGTGTTTTATGACCTGGTGCTGCACCCTTAC---TACGGCCTCGGCGAT 5704 Query 16038 CGTTTGACCGCTGCGAATATTGATAAATGGACGCTTTATCAGGTTGCTCAGTATTGTGAT 16097 || | || ||| ||||| ||| ||||||||| | || || || || ||| Sbjct 5705 CGCATCGATGCCACGATGGTTGATCGCTGGTCGCTTTATCGCATCGCGCAATACTGCGAT 5764 Query 16098 CAGATGGTACCAGACGGCAAAGGGGGCAACGGTACAGAACCACGTTATACCTGCAACGTG 16157 |||||||| || || || ||||| ||| | || || || | |||||||||| || Sbjct 5765 CAGATGGTGCCGGATGGAAAAGG------CGGCATGGAGCCGCGCTTTACCTGCAACCTG 5818 Query 16158 TACATTCAGGACCGGAACGACGCCTACACAGTCCTGCGTGATTTTGCCGCTATCTTCCGT 16217 ||| | || | | | ||| |||||| | || |||| ||| | || | ||||| | Sbjct 5819 TACCTGCAAAAGCAGGCCGAGGCCTACGCGGTGCTGCAGGATCTGGCATCGATCTTTCAC 5878 Query 16218 GGCATGACCTACTGGGGCGGGGATCAGATTGTGGCCCTGGCTGACATGCCGCGCGAT 16274 || || ||||||||| ||| ||||| |||| | || || |||||| ||||| Sbjct 5879 GGTCTGGCCTACTGGGACGGCAGCCAGATCGTGGTCAACGCCGATATGCCGGGCGAT 5935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122362176485908