Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09] 3,088,511 sequences; 2,785,377,831 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq1405227 84.2 2e-11 >seq1405227 Length=123 Score = 84.2 bits (92), Expect = 2e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 20227 GGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGACATGAACACA 20286 || || || ||||| || |||||||| |||||||| |||||||| || ||| | || Sbjct 121 GGCCCAGTTTATGGCTTCCAATGGAGGCATTTTGGGGCTGAATACAAAGATATGGATTCA 62 Query 20287 AATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATTAAAACGAAC 20346 |||||| || ||||||||||||||| | ||||| || || | ||| ||||| ||| Sbjct 61 GATTATTCAGGTCAAGGAGTAGATCAACTGCAAAAAGTGATCGACACAATCAAAACCAAC 2 Query 20347 C 20347 | Sbjct 1 C 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 384158224116895