Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09] 3,088,511 sequences; 2,785,377,831 total letters Query= NC_003085.1 Length=49534 Score E Sequences producing significant alignments: (Bits) Value seq108461 87.8 5e-13 >seq108461 Length=6150 Score = 87.8 bits (96), Expect = 5e-13 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 7459 ATCCACATGCCCCGGTGGGCGTCGCGCCTCACGCTGGAGGTGACGGGCGTCCGCGTCGAG 7518 ||||| ||||| || ||||| | ||| || ||||||| | || | ||| ||||||||| Sbjct 3970 ATCCATATGCCGCGCTGGGCCTGCCGCATCCTGCTGGAGATCACCGCCGTGCGCGTCGAG 4029 Query 7519 CGGTTGCAGGACATCACCGACGAGGACGCGCGGGCCGAGGG 7559 |||||||||||||||||||| || | || ||||||||| Sbjct 4030 CGGTTGCAGGACATCACCGAAGACCAGGCCAAGGCCGAGGG 4070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152578180262672