Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_004690.1
Length=113220
Score E
Sequences producing significant alignments: (Bits) Value
seq155098 102 6e-17
seq185925 93.3 3e-14
>seq155098
Length=7669
Score = 102 bits (112), Expect = 6e-17
Identities = 154/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 15148 TCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGC 15207
||| || |||| |||||| ||||| || ||||| ||| |||| || | | | | |
Sbjct 7222 TCTCAACACTAGATGAAGAGTGGACTCCTTTTGAATGCTGTAGTCAGACAAAGTACGTTC 7281
Query 15208 GTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTT 15267
||||| | ||| |||||||| | |||| ||| ||||| ||||||||||| ||
Sbjct 7282 ATCTTCCAGTTGCTTGCCAGCAAAGATCAGTATTTGCTGGTCAGGAGGAATTCCTTCCTT 7341
Query 15268 GTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAAT 15327
|| || ||| |||||||| ||||||| ||||| ||| || || | || ||
Sbjct 7342 ATCCTGGATCTTGGTCTTTACATTTTCTATTGTATCCGAGGGTTCGACCTCGAGAGTGAT 7401
Query 15328 GGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15366
||| || || ||||| || || |||||||| ||||| ||
Sbjct 7402 GGTCTTCCCCGTCAGGGTCTTCACAAAAATCTGCATCTT 7440
>seq185925
Length=7279
Score = 93.3 bits (102), Expect = 3e-14
Identities = 154/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 15148 TCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAAT-TCTCG 15206
||| || |||| |||||| ||||| || ||||| |||||||| || | | | | ||
Sbjct 301 TCTCAACACTAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTATGTC- 359
Query 15207 CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTT 15266
| ||||| | ||| |||||||| | ||| | ||| ||||| ||||||||||| |
Sbjct 360 CATCTTCCAGTTGCTTGCCAGCACAGATCTGTCTTTGCTGGTCAGGAGGAATTCCTTCCT 419
Query 15267 TGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAA 15326
| || || ||| ||||||| ||||||| ||||| ||| || || | || |
Sbjct 420 TATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCAAGGGTTCGACCTCAAGAGTGA 479
Query 15327 TGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15366
|||| || || ||||| || || | ||||| ||||| ||
Sbjct 480 TGGTCTTCCCCGTCAGGGTCTTCATGAAAATCTGCATCTT 519
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 348546330223851
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |