Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09] 3,088,511 sequences; 2,785,377,831 total letters Query= NC_004745.1 Length=30728 Score E Sequences producing significant alignments: (Bits) Value seq3088503 374 2e-99 seq3088488 329 6e-86 seq3088487 109 1e-19 seq3063309 91.5 3e-14 >seq3088503 Length=21467 Score = 374 bits (414), Expect = 2e-99 Identities = 1015/1527 (66%), Gaps = 45/1527 (3%) Strand=Plus/Minus Query 1304 CGCCCAGGCGAGGTCGGCGTGGCTGGCTTCCTCGCTGCGGCTGGCCTCATAGGTGGCGCT 1363 ||||||||| |||||||| |||| || | ||| |||| | || |||||| Sbjct 11462 CGCCCAGGCCAGGTCGGCATGGCCGGTGTTGTCGTTGCGCCCTGCGGTGTAGGTGTACTG 11403 Query 1364 GCGTCCGC-TGCTGGTCATGGTCTTGCGGATAGCCATAAACGAGCTG-GTGATGTCGGTG 1421 ||| |||| ||| ||| | ||||||||||| ||||| | ||| ||| | |||||||| Sbjct 11402 GCGACCGCCTGC-GGTGACCGTCTTGCGGATCGCCATCATCGA-CTGCGCCATGTCGGTC 11345 Query 1422 GCGCTGACGTCATATTCCAGACAGCCACGGCGGATAACGTCTTTTGCCTTGAGCACCATT 1481 | | |||| | ||||| | ||| |||| ||||| | ||||| ||||||| Sbjct 11344 CACCCGGCGTCGAACTCCAGCCGGCCGTTATGGATCACGTCATAGGCCTTCAGCACCAG- 11286 Query 1482 GCG-GTTTTCATTTCCGGTGTGTAGCGGATATCGCGCGCGGCAGGATAGAACGAGCGCAC 1540 ||| ||||| | ||| || | |||| || | | | || || ||||| |||||| Sbjct 11285 GCGTGTTTTGACTTCGGGCGAATAGCTGAAGGTGGTCACAGCCGGGAAGAACTGGCGCAC 11226 Query 1541 GAGCTGGAACACGCCGACACCGAGGCCGGTGGCATCAATACCGATGTATTCGACGTTATA 1600 ||||| ||||||| ||| || |||||| ||||||| ||||| || || || Sbjct 11225 CAGCTGCGCCACGCCGCTACCCAGCCCGGTGACATCAATCCCGATATAGGTCACCCAGTA 11166 Query 1601 TTTTTCGGTGAGTTTGCGGATGGATTCAGCCTGGGTGGCAAAGTCCATGCCTTTCCACTG 1660 ||| || || ||| || | ||||||| |||||||||||||| | || Sbjct 11165 GCGGTCGCAGACGTTTTTGATAAATGCCGCCTGGGCCGCAAAGTCCATGCCCCGGAATTG 11106 Query 1661 GTGACGCTCAAGTATTCTGAATTTGCCACCGGCCACCACCGGCGGTGCCAGTACCACGCA 1720 ||| ||||| || | | ||||||||| || | |||| |||||| || | ||||| Sbjct 11105 GTGCCGCTCCAGGACGCGGAATTTGCCGCCCGGTACCAGCGGCGGCGCAACCACCACCAG 11046 Query 1721 TCCGGCACTGTCGCCACGGTGT--GACGGGTCGTAACCAATCCATACCGGGCGGGAGCCG 1778 |||| | || || ||| | | |||||||| || ||||||||| | ||| ||| Sbjct 11045 CCCGGAGCAATCACC--GGTTTCCGCTGGGTCGTAGCCGATCCATACCTGACGGTCACCG 10988 Query 1779 AACGGATTGGCGGCAAAGGGTGCATAGTCTTC---CCATTCTTCCAGCGTGTCGACCATG 1835 ||||| ||| || || ||||| || |||||| || ||||||||||| Sbjct 10987 AACGGCCGCATGGCGAATGGCTTGTAGTCCTCTGCCCATTCAACCCAACTGTCGACCATG 10928 Query 1836 CAGCGTTGCAGCTCCTCGAACGGGAACACCGATGCCTTG-TCGTCAACAAATTCACACAT 1894 |||| |||||| | | ||||| || | | || || ||||||||||| |||||||| Sbjct 10927 CAGCTCTGCAGCAACGCCAACGGAAAGAT-GCTGGCTCCATCGTCAACAAACTCACACAT 10869 Query 1895 GAACAGGTTTTTAAAATCGTCGGCGCTGTTTTCGCGTTTGAGCTGCTCAATGTCGAACAG 1954 |||||||| || | || | ||||| || || | || ||||||||||||||| Sbjct 10868 CAACAGGTTGGCGAACGCCTCAGGGCTGTACTCCCGACGCAACTCCTCAATGTCGAACAG 10809 Query 1955 CGTGCAGCCGCCTTTCAGGGCGTCCTCAATGGTGACAATCTGCCGCCACTGGCCGTCCGC 2014 |||||||| | | |||||| |||||||| |||||||||||| | |||| | Sbjct 10808 ATCACAGCCGCCGTGCTCTGCGTCCAGGATGGTGACGATCTGCCGCCACAACCGGTCCTC 10749 Query 2015 ACAGAGAAGACCTCCGGCAAGGGCGTTATGACTGACGTCGATTTCCACGCGTTCGGCGGC 2074 |||| | || || || || ||||||| | | ||| ||| | Sbjct 10748 GCAGAACCGCCCCTGTTGGAGCGCCCCGTGGGAAACGTCGACCTTGGTGTGTT--GCGCC 10691 Query 2075 GCTGGCGCGTCCCCGGTTGAACAGTTCACCCGACCAGAACGGGTAGGCGTCGTGCGCCAG 2134 |||||| ||| |||||| | || || | |||||| | |||||| || || |||| Sbjct 10690 GCTGGCTTA-CCCTTGTTGAAGCGCTCGCCGGTCCAGAAGGTGTAGGCCTCATGGGCCAT 10632 Query 2135 CGTGGACGGGGTGGAGAAATAGGTCGAGCGCAGGTGGCTCTGTGAGGCCATACCTGATGC 2194 ||||||| || ||||| ||||| |||| | | || |||||| || || || Sbjct 10631 GCTGGACGGCGTCGAGAAGTAGGTTTTGCGCCACTTCTTGTGCATGGCCATGCCCGAAGC 10572 Query 2195 CACCTTACGCAGTACCTGAAAATTCGGGATCCAGAAAATCTCGTCGACGTACAGGTCGCC 2254 ||||| |||| ||| ||| || ||||||| | ||||||| ||| | | ||| Sbjct 10571 GACCTTGTTCAGTTCCTCAAACTTGAACGTCCAGAAGAATTCGTCGAAGTAGAAATTGCC 10512 Query 2255 GTTATGGCTCTGTGCGGTGTTGGAGTTGGTGCCGAGAAAAATCAGTTTTGCGCCGTTATT 2314 || | || ||| ||||| | ||||| ||||| |||| ||| | |||||||| Sbjct 10511 GTGGTAGCCCTGGGCGGTACGCGCATTGGTACCGAGGAAAAACAGCTCGGCGCCGTT--- 10455 Query 2315 GCCCAGGACAATCGGGTCACCGGTCAGGTCAACGTC---AACCAGACGGGCAAAGGCGAT 2371 | || || || || || || ||||| || || | |||| ||||||||| || Sbjct 10454 GGGCAATACGATGGGATCCCCCGTCAGCTCGACACCGATAACCTCACGGGCAAATGCCTG 10395 Query 2372 GATGTATTCGCGGAACACATACGCCTGCGTTTTACTGGCCGACAGAAAAATCTGGTTATG 2431 |||||| |||| |||| ||| || || |||| || ||||| || ||||| || | Sbjct 10394 GATGTACCCGCGAAACAGATAGGCTTGGTTTTTCGATGCGGACAGGAAGATCTGATTGCG 10335 Query 2432 ACCGGTTTTCAGGGCACGCAGCAGCGCCTCGCGGGAAAAATAAAACGTCGCGCCAATCTG 2491 ||||||| ||| ||| || | ||||||||||| ||| ||| | |||||||| ||||| Sbjct 10334 CCCGGTTTCCAGCGCATCAAGAAACGCCTCGCGGGCAAAGTAATAGGTCGCGCCGATCTG 10275 Query 2492 GCGGGATTTCAGGATATCTCGGATGCGGTGCT--CAAGCCCGGCGCGATACCAGTGCAAC 2549 ||| ||| ||||| | || | || || | | ||||||| ||||||| | Sbjct 10274 CCGGCTTTTGAGGATGACGCGAGTCCGTTGATTGCCAGCCCGG-----TACCAGTCTTTC 10220 Query 2550 TGATATTCGAAAGACTGCTCAAAGAAAATCTGCTC-CAGCTTTTCGATGGCCTCGTCACT 2608 || || |||||| | || | ||| || | | || | ||||| ||| || || Sbjct 10219 TGGTAGTCGAAACAGCCGTC-GATAAACGCTTCACGCAACAGCTCGATCTGCTCTTCGCT 10161 Query 2609 GAAAAAATTCTTTTTCGGTTTGCGACGCCCG-CCTTTGTTGCGGTTAGCGACGTTCGGAT 2667 || | || |||| ||| | | | | || | |||||| ||||| | ||| || | Sbjct 10160 GATATCGTT-TTTTGGGGTCTTTTTCTTCGGACCCTCGTTGCGTTTAGCCAGGTTAGGGT 10102 Query 2668 TAAGGTCTGCCTCGTT---GCCGGTCTGACTGTAGCGGTTGACCCGTGCCAGTCGTTCAA 2724 | || || | ||| | |||| |||| |||| | | | ||| | ||||| | Sbjct 10101 TGAGCTCGGTTTCGGTACCGCCGCCCTGA---AAGCGCTGAATTCTGGCCTGGCGTTCCA 10045 Query 2725 TCTGGCGTCCCAGCAGGTCAATTTCCTTGAAGTCACCGCCGGTTTTCTGCGGT--TTGAT 2782 ||||| |||||| ||||||||||||||||| |||||| | | ||| | |||| Sbjct 10044 ATTGGCGGTGCAGCAGATCAATTTCCTTGAAGTCCCCGCCGCTCT--TGCTTTCCTTGAG 9987 Query 2783 GATGAGCTGGGTCAGCCGCGCTTCCAG 2809 ||| ||||| || |||||||||||| Sbjct 9986 GATCAGCTGCACCAACCGCGCTTCCAG 9960 Score = 183 bits (202), Expect = 6e-42 Identities = 220/299 (74%), Gaps = 0/299 (0%) Strand=Plus/Minus Query 4745 ATTGAGCCGTGGTATCAGGAAGACCCTGACCTTGTGGTGATTGTGGGGCGTCAGCTGCTG 4804 |||| ||||||||| |||||||||||||| || |||||||| || || || |||||| Sbjct 8111 ATTGCGCCGTGGTACCAGGAAGACCCTGATCTGGTGGTGATCTGCGGTCGCCAACTGCTG 8052 Query 4805 GCGGACAAATATTTCCCCATCGTCAACAAGGAGCAGGACAACAGCGAAATGCTGGCCGCT 4864 || ||||| |||||||| ||| ||||||| || | | | |||||||||||||| Sbjct 8051 GCCGACAAGTATTTCCCGATCATCAACAAAGACAACGCGCCGACTGAAATGCTGGCCGCC 7992 Query 4865 GACGTCATCATCAGCCAGAAACGCATCGGTAACCTGCCGGCGGTACGCGTCCCGTACTTC 4924 || || ||| ||| || || ||| | || || |||| || || ||||| || |||||| Sbjct 7991 GATATCGTCACCAGTCAAAAGCGCTTGGGCAATTTGCCAGCCGTGCGCGTGCCTTACTTC 7932 Query 4925 CCGGCGGATGCGATGCTCATCACGAAGCTGGAAAACCTGTCCATCTACTACATGGATGAC 4984 ||| || | | |||| |||| ||||||||||||||||| ||||||| ||| | | Sbjct 7931 CCGCCGCGCGGGTTGCTGGTCACCAAGCTGGAAAACCTGTCGATCTACTGGCAGGAAGGC 7872 Query 4985 AGCCATCGCCGCGTGATTGAGGAAAACCCGAAACTCGACCGCGTGGAGAACTACGAGTC 5043 |||| |||||| | | || || | || | |||||| | || ||||||||||| Sbjct 7871 AGCCGCCGCCGCACCGTCGTCGACAATGCCAAGCGTGACCGCATCGAAAACTACGAGTC 7813 Score = 100 bits (110), Expect = 5e-17 Identities = 133/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 559 TCGATATCGTTGCGATCCTGCACGGCATCAGTGACGTACATGATATATCCGGCATGAGCG 618 ||||||||| | | ||| ||||||| || | ||| | || | ||||| ||| | Sbjct 12192 TCGATATCGGTTTCAGTCTGTGCGGCATCGGTCATGTAGAGAATGAAGCCGGCGTGACTG 12133 Query 619 CCGTTTTCGTAATACTTGCGGCGGAACAGCGTGGCCGACTCATTCAGCCAGGCAGAGTTA 678 || || ||||| |||||||||||||||| ||||||||| || || ||| | || || | Sbjct 12132 CCATTCTCGTAGTACTTGCGGCGGAACAACGTGGCCGATTCGTTGAGCAACGCCGACTGC 12073 Query 679 AGGGCGCTGAGATATTCCGGCAGGCCGTACAGCTCCTGATTAATATCCGGCTCCAGCAGA 738 | ||| || | | ||||||| ||| || | |||||| | | ||||| || ||||| Sbjct 12072 AAGGCACTAATCCACTCCGGCAAGCCATAAATCTCCTGGTGCAAATCCGCTTCTCGCAGA 12013 Query 739 TGAAA 743 ||||| Sbjct 12012 TGAAA 12008 >seq3088488 Length=17142 Score = 329 bits (364), Expect = 6e-86 Identities = 777/1159 (67%), Gaps = 32/1159 (3%) Strand=Plus/Minus Query 16472 GACTATCATCATGGCGTGCAGGTGCTGGAGATTAACGACGGCACCCGCGTCATTTCCACC 16531 || |||| || ||||||| ||| | || | ||||||||||||||| |||| ||| Sbjct 16622 GATTATCTCCACGGCGTGCGGGTCATCGAACTCAACGACGGCACCCGCCCCATTCGCACT 16563 Query 16532 GTATCCACTGCCATTGTCGGCATGGTCTGCACGGCCAGCGATGCGGATGCGGAAACCTTC 16591 | |||| || | |||||||||| ||||| || |||||||| | ||| Sbjct 16562 ATTCCCACCGCAGTCATCGGCATGGTTTGCACCGCTGAAGATGCGGACCCACTCGTTTTC 16503 Query 16592 CCTCTCAATAAACCGGTGCTGATTACCAATGTGCAGAGCGCAATTGCAAAGGCCGGTAAA 16651 ||||| | | || || || || ||||| ||||| | ||| | | |||||||| Sbjct 16502 CCTCTGGACACTCCAGTCCTCATCACCAACGTGCAAACCGCCGTCGGCAAGGCCGGCGTC 16443 Query 16652 AAAGGCACGCTGGCGGCGTCGTTACAGGCCATCGCTGACCAGTCAAAACCGGTCACCGTT 16711 || ||||| ||||| || | || | |||||| |||||| | || || | || ||| Sbjct 16442 AAGGGCACCCTGGCTGCCAGCCTGCAAGGCATCGCCGACCAGACCAAGCC--TTAC-GTT 16386 Query 16712 GTTGTG---CGCGTGGAAGACGGCACCGGCGACGACGAGGAA-ACGAAACTCGCGCAGAC 16767 | ||| || || |||| ||| | | ||| | ||| || |||| |||| | Sbjct 16385 ATCGTGGTACGGGTCAAAGAAGGCGCTGACGAAG-CGACGACTACGA-----GCGCC--C 16334 Query 16768 TGTTTCCAATATTATCGGCACCACCGACGAAAACGGTCAGTACACCGGACTGAAAGCCCT 16827 || ||| ||| || || || || |||||| |||||||| ||||||| || Sbjct 16333 TG--------ATTGGCGGTACAAC--ACCAAC-CGGTCAATACACCGGCATGAAAGCTCT 16285 Query 16828 GATGGGGGCTGAGTCGGTTACCGGCGTTAAACCGCGCATTCTCGGCGTACCGGGACTGGA 16887 | | | || | || ||| | | ||||| || || ||||| || || || || Sbjct 16284 GCTCGCAGCCAAATCACGCGTGGGCATGACTCCGCGTATCCTTGGCGTGCCAGGCCTCGA 16225 Query 16888 CACCAAAGAGGTCGCCGTCGCACTGGCATCGGTAT-GCCAG-GAACTGAATGCCTTCGGG 16945 || || ||| ||| || | || || |||| || ||| ||||| | Sbjct 16224 CAGTTTGCCAGTAGCCACCGCCCTCGG--CGCCATCGCCAAAGACCTGCGCGCCTTTGCA 16167 Query 16946 TATATCAGCGCATGGGGTTGTAAAACCATTTCCGAGGTGAAAGCCTACCGCCAGAATTTC 17005 || | ||||| ||| || ||||||| ||||| || |||||| |||| ||| Sbjct 16166 TACGTAAGCGCCTGGAACTGCAAAACCAAGGAAGAGGTAGTGGCGTACCGCGAGAACTTC 16107 Query 17006 AGCCAGCGTGAGCTGATGGTTATCTGGCCGGATTTCCTCGCATGGGATACGGTTACCAGT 17065 | || || ||||||| || |||||||| ||||| ||||| || || |||| Sbjct 16106 GGTGCCCGCGAAATGATGGTGATTTGGCCGGACTTCCTGAACTGGGACACTGTCACCAAC 16047 Query 17066 ACCACCGCCACCGCGTATGCCACCGCTCGTGCGCTGGGTCTGCGCGCTAAAATCGACCAG 17125 | ||||||| ||| | ||| || || || || || || ||||| || |||||||| Sbjct 16046 AAGACCGCCAGCGCTTCGGCCGTGGCCCGCGCCCTCGGCCTTCGCGCCAAGATCGACCAA 15987 Query 17126 GAGCAGGGCTGGCATAAAACGCTGTCCAACGTCGGGGTGAACGGTGTTACCGGCATCAGT 17185 ||| ||| ||||||||||| ||||||||||| | |||| || || ||||| ||||| Sbjct 15986 GAGACGGGTTGGCATAAAACCCTGTCCAACGTGGCCGTGAGTGGCGTGACCGGTATCAGC 15927 Query 17186 GCATCCGTCTTCTGGGATTTGCAGAAGCCAGGCACTGATGCTGACCTGCTGAACGAGGCA 17245 || ||| ||||||||| |||| || |||| ||| || || || || ||| || | Sbjct 15926 GCCGACGTGTTCTGGGATCTGCAAAACCCAGCCACCGACGCCAACTACCTCAAC-AGCAA 15868 Query 17246 -GGCGTCACAACGCTGGTTCGCCGCGACGGTTTTCGTTTCTGGGGTAACCGTACCTGCTC 17304 | |||||| || ||| | | | |||||||||| |||||||||| ||| |||||| Sbjct 15867 CGACGTCACCACCCTGATCAACGCCAACGGTTTTCGCTTCTGGGGTAGCCGCACCTGCAG 15808 Query 17305 TGATGACCCGCTGTTCCTCTTTGAAAGCTACACACGCACCGCGCAGGTACTGGCCGACAC 17364 |||||||||| ||||| ||| |||| |||||| |||||||||||| | || || ||||| Sbjct 15807 TGATGACCCGTTGTTCGCCTTCGAAAACTACACCCGCACCGCGCAGATCCTCGCGGACAC 15748 Query 17365 GATGGCTGAGGCGCACATGTGGGCTATTGATAAGCCCATCACCGCAACGCTGATTCGCGA 17424 |||| || |||||||||||||| |||| || || ||| | ||| | ||||| Sbjct 15747 CATGGGCGAAGCGCACATGTGGGCAGTTGACCGCCCTATGCACGCCTCCCTGGTACGCGA 15688 Query 17425 CATCATTGACGGCATCAATGCCAAATTCCGTGAACTGAAAAACAACGGTTATATCGTGGA 17484 | | | || ||| | | ||||| | || || ||||| | | || || | | | Sbjct 15687 CCTGGTCGAAGGCGTAAGCGCCAAGATGCGCGAGTTGAAATCCCAGGGCTACCTGATCGG 15628 Query 17485 TGGCACATGCTGGTTCAGCGAAGAATCCAACGATGCGGAAACCCTCAAGGCCGGAAAACT 17544 |||| |||||| | || || |||| || |||||||||||||| || || Sbjct 15627 CGGCAGTTGCTGGAACCCGGACGACATCAACACCAAAGACACCCTCAAGGCCGGCAAGCT 15568 Query 17545 GTATATCGACTACGACTATACCCCGGTGCCTCCTCTCGAAAACCTGACCCTGCGCCAGCG 17604 | | || |||||||| ||||| ||||| || || ||| |||| ||| | |||||||| Sbjct 15567 CTGGCTTGATTACGACTACACCCCCGTGCCGCCACTTGAAGACCTCACCTTCCGCCAGCG 15508 Query 17605 TATTACTTCCAGATACCTG 17623 || || | | |||||| Sbjct 15507 AATCACCGACCGTTACCTG 15489 >seq3088487 Length=16894 Score = 109 bits (120), Expect = 1e-19 Identities = 226/334 (68%), Gaps = 8/334 (2%) Strand=Plus/Minus Query 11429 AACCCGGATACCTGTCCGGCAAATCTGCTGCCGTGGCTGGCGTGGGCGTTTTCGGTCGAC 11488 ||||||||||| || |||||| |||| | | |||| ||||| | ||||| || Sbjct 13092 AACCCGGATACGTGCCCGGCAGGCTTGCTTCACCAGTTGGCCTGGGCCTGGTCGGTTGAT 13033 Query 11489 AGGTGGGATGAAAAGTGGCCGGAAGCGACAAAACGCGCCGTTATCCGCGATGCGTATTTC 11548 | ||||| | || ||| |||| || | || || || | ||| ||| |||| | | Sbjct 13032 CGCTGGGACAACAACTGGTCGGAGGCAATCAAGCGTGCGGCTATACGCTCGGCGTTCTAC 12973 Query 11549 ATTCATTGTCATAAAGGCACTGTCGGCGCAATCCGGCGTGTGGTGGAGCCGCTCGGCTAT 11608 | ||| || || ||||| ||||||| | |||||||| || || || | || || Sbjct 12972 GTACATACCCACAAGGGCACCATCGGCGCTCTGCGGCGTGTCGTCGAACCTTTGGGTTAC 12913 Query 11609 CTCATTAACGTAAAGGAATGGTGGGAGA------CAAACGACCCGCCCGGAACCTTTCGC 11662 || || | || |||| |||||| ||| |||| | | || || |||||| || Sbjct 12912 CTGATCGAAGTTCAGGAGTGGTGGCAGACCACGCCAAAGGGCGTTCCGGGCACCTTT-GC 12854 Query 11663 CTTG-ATATCGGTGTGCTGGAAAGCGGTATCACGGAGGAGATGTATCTGGAAATGGAACG 11721 ||| | | || |||||||||| || || || ||||||||||||| ||| | | | Sbjct 12853 GTTGAAGGTGGGCGTGCTGGAAACGGGCATTACCGAGGAGATGTATCAAGAACTCACATG 12794 Query 11722 GCTGATTGCCGATGCCAAACCCGCAAGTCGCCAT 11755 ||| |||| || |||||||| | ||||| ||| Sbjct 12793 GCTAATTGATGACGCCAAACCAGTCAGTCGGCAT 12760 >seq3063309 Length=1409 Score = 91.5 bits (100), Expect = 3e-14 Identities = 201/296 (68%), Gaps = 8/296 (3%) Strand=Plus/Minus Query 2223 ATCCAGAAAATCTCGTCGACGTACAGGTCGCCGTTATGGCTCTGTGCGGTGTTGGAGTTG 2282 ||||| ||| ||| |||||||| | || ||| | | || ||| |||||| || ||| Sbjct 292 ATCCAAAAATACTCATCGACGTAGACGTGGCCATGGTAGCCCTGGGCGGTGCTGCTATTG 233 Query 2283 GT-GCCGAGAAAAATCAGTTTTGCGCCGTTATTGCCCAGGACAATCGGGTCACCGGTCAG 2341 || | | ||||| ||| | |||||||| || | || |||||| |||||||| Sbjct 232 GTCGACAAGAAACG-CAGCTCGGCGCCGTTGCTGAGCGTGA---TCGGGTTGCCGGTCAG 177 Query 2342 GTCAACGTC-AACCA--GACGGGCAAAGGCGATGATGTATTCGCGGAACACATACGCCTG 2398 || | ||| ||||| | ||||| ||||||||| |||||| | | || ||| Sbjct 176 CTCGATGTCGAACCACTGCTTTGCAAACTGGATGATGTAACTGCGGAAAATTTCCGACTG 117 Query 2399 CGTTTTACTGGCCGACAGAAAAATCTGGTTATGACCGGTTTTCAGGGCACGCAGCAGCGC 2458 || ||||||||||| || | |||||| | ||||| || ||| || | ||| Sbjct 116 CGAGCGGCTGGCCGACAGGAACACCTGGTTGTCGCCGGTCAGCACGGCGTCCATGAACGC 57 Query 2459 CTCGCGGGAAAAATAAAACGTCGCGCCAATCTGGCGGGATTTCAGGATATCTCGGA 2514 |||| || || || ||||| ||| | ||||||| ||||||||| | |||| Sbjct 56 TTCGCCGGCGAAGTAGTACGTCAGGCCCACCTGGCGGCTTTTCAGGATGTTGCGGA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 94606116701580