Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_005056.1
Length=32684
Score E
Sequences producing significant alignments: (Bits) Value
seq3088488 365 9e-97
seq3088503 356 5e-94
seq2959876 147 4e-31
seq3084702 138 2e-28
seq3063309 100 6e-17
>seq3088488
Length=17142
Score = 365 bits (404), Expect = 9e-97
Identities = 784/1155 (68%), Gaps = 44/1155 (4%)
Strand=Plus/Minus
Query 15842 GACTATCATCACGGCGTGCAGGTGCTGGAGATTAACGAGGGCACCCGCGTCATTTCCACC 15901
|| |||| |||||||||| ||| | || | ||||| ||||||||| |||| |||
Sbjct 16622 GATTATCTCCACGGCGTGCGGGTCATCGAACTCAACGACGGCACCCGCCCCATTCGCACT 16563
Query 15902 GTATCCACCGCCATTGTTGGCATGGTCTGCACGGCCAGCGATGCGGATGCGGAAATCTTC 15961
| ||||||| | | |||||||| ||||| || |||||||| | | |||
Sbjct 16562 ATTCCCACCGCAGTCATCGGCATGGTTTGCACCGCTGAAGATGCGGACCCACTCGTTTTC 16503
Query 15962 CCCCTCAATAAACCGGTACTGATTACCAATGTGCAGAGTGCAATTGCAAAGGCCGGTAAA 16021
|| || | | || || || || ||||| ||||| | || | | ||||||||
Sbjct 16502 CCTCTGGACACTCCAGTCCTCATCACCAACGTGCAAACCGCCGTCGGCAAGGCCGGCGTC 16443
Query 16022 AAAGGCACGCTGGCGGCGTCGTTGCAGGCTATCGCCGACCAGTCAAAACCGGTCACCGTT 16081
|| ||||| ||||| || |||| | |||||||||||| | || || | || |||
Sbjct 16442 AAGGGCACCCTGGCTGCCAGCCTGCAAGGCATCGCCGACCAGACCAAGCC--TTAC-GTT 16386
Query 16082 GTCGT---ACGTGTGGAAGACGGCACCGGCGAAGACGAAGAA-ACGAAACTCGCGCAGAC 16137
|||| ||| || |||| ||| | | ||||| ||| || |||| ||| | ||
Sbjct 16385 ATCGTGGTACGGGTCAAAGAAGGCGCTGACGAAG-CGACGACTACGAG---CGCCCTGAT 16330
Query 16138 CGTTTCCAATATCATCGGCACCACTGACGAAAACGGTCAGTACACCGGACTGAAGGCCCT 16197
| ||| || || || || |||||| |||||||| |||| || ||
Sbjct 16329 TGG------------CGGTACAAC--ACCAAC-CGGTCAATACACCGGCATGAAAGCTCT 16285
Query 16198 GCTGGCGGCAGAGTCGGTAACCGGTG----TTAAACCGCGTATTCTCGGCGTGCCGGGAC 16253
||| || || | || || ||| | | |||||||| || |||||||| || |
Sbjct 16284 GCTCGCAGCCAAATC----ACGCGTGGGCATGACTCCGCGTATCCTTGGCGTGCCAGGCC 16229
Query 16254 TGGACACCAAAGAGGTGGCTGTTGCACT-GGCATCAGTCTGTCAGA-AGCTGCGCGCTTT 16311
| |||| || || || || ||| || || | || | | |||||||| ||
Sbjct 16228 TCGACAGTTTGCCAGTAGCCACCGCCCTCGGCGCCA-TC-GCCAAAGACCTGCGCGCCTT 16171
Query 16312 CGGGTATATCAGCGCATGGGGCTGTAAAACCATTTCCGAGGTGAAAGCCTACCGCCAGAA 16371
| || | ||||| ||| ||| ||||||| ||||| || |||||| ||||
Sbjct 16170 TGCATACGTAAGCGCCTGGAACTGCAAAACCAAGGAAGAGGTAGTGGCGTACCGCGAGAA 16111
Query 16372 TTTCAGCCAGCGTGAGCTGATGGTCATCTGGCCGGATTTCCTCGCATGGGATACGGTCGC 16431
||| | || || ||||||| || |||||||| ||||| ||||| || ||| |
Sbjct 16110 CTTCGGTGCCCGCGAAATGATGGTGATTTGGCCGGACTTCCTGAACTGGGACACTGTCAC 16051
Query 16432 CAGTACCACCGCCACCGCGTATGCCACCGCCCGTGCGCTGGGTCTGCGCGCTAAAATCGA 16491
|| | ||||||| ||| | ||| ||||| || || || || ||||| || |||||
Sbjct 16050 CAACAAGACCGCCAGCGCTTCGGCCGTGGCCCGCGCCCTCGGCCTTCGCGCCAAGATCGA 15991
Query 16492 CCAGGAGCAGGGCTGGCATAAAACGCTGTCCAACGTCGGGGTGAACGGTGTTACCGGCAT 16551
||| ||| ||| ||||||||||| ||||||||||| | |||| || || ||||| ||
Sbjct 15990 CCAAGAGACGGGTTGGCATAAAACCCTGTCCAACGTGGCCGTGAGTGGCGTGACCGGTAT 15931
Query 16552 CAGCGCGTCCGTATTCTGGGATTTGCAGGAGTCCGGCACCGATGCTGACCTGCTTAACGA 16611
|||||| ||| ||||||||| |||| | | | |||||| || || || ||| |
Sbjct 15930 CAGCGCCGACGTGTTCTGGGATCTGCAAAACCCAGCCACCGACGCCAACTACCTCAAC-A 15872
Query 16612 GTCA-GGCGTCACAACGCTGAT--TCGCCGTGACGGTTTCCGCTTCTGGGGTAACCGTAC 16668
| | | |||||| || ||||| |||| ||||||| ||||||||||||| ||| ||
Sbjct 15871 GCAACGACGTCACCACCCTGATCAACGCC--AACGGTTTTCGCTTCTGGGGTAGCCGCAC 15814
Query 16669 CTGCTCTGATGATCCGCTGTTCCTCTTTGAAAACTACACCCGCACCGCGCAGGTGCTGGC 16728
|||| |||||| ||| ||||| ||| |||||||||||||||||||||||| | || ||
Sbjct 15813 CTGCAGTGATGACCCGTTGTTCGCCTTCGAAAACTACACCCGCACCGCGCAGATCCTCGC 15754
Query 16729 CGACACGATGGCTGAGGCGCACATGTGGGCGGTGGACAAGCCCATCACCGCAACGCTGAT 16788
||||| |||| || |||||||||||||| || ||| || || ||| | ||| |
Sbjct 15753 GGACACCATGGGCGAAGCGCACATGTGGGCAGTTGACCGCCCTATGCACGCCTCCCTGGT 15694
Query 16789 TCGCGACATCGTTGACGGCATCAATGCCAAATTCCGTGAGCTGAAAACAAACGGCTATAT 16848
|||||| | || || ||| | | ||||| | || ||| ||||| | | ||||| |
Sbjct 15693 ACGCGACCTGGTCGAAGGCGTAAGCGCCAAGATGCGCGAGTTGAAATCCCAGGGCTACCT 15634
Query 16849 CGTGGATGCGACCTGCTGGTTCAGCGAAGAGTCCAACGATGCGGAAACCCTCAAGGCCGG 16908
| | | | |||||| | || || |||| || ||||||||||||||
Sbjct 15633 GATCGGCGGCAGTTGCTGGAACCCGGACGACATCAACACCAAAGACACCCTCAAGGCCGG 15574
Query 16909 AAAACTGTATATCGACTACGACTATACCCCGGTGCCTCCTCTTGAAAATCTGACCCTGCG 16968
|| || | | || |||||||| ||||| ||||| || |||||| | || ||| | ||
Sbjct 15573 CAAGCTCTGGCTTGATTACGACTACACCCCCGTGCCGCCACTTGAAGACCTCACCTTCCG 15514
Query 16969 CCAGCGCATTACCGA 16983
|||||| || |||||
Sbjct 15513 CCAGCGAATCACCGA 15499
>seq3088503
Length=21467
Score = 356 bits (394), Expect = 5e-94
Identities = 1011/1526 (66%), Gaps = 43/1526 (3%)
Strand=Plus/Minus
Query 1303 CGCCCAGGCGAGGTCGGCGTGGCTGGCTTCCTCGCTGCGGCTGGCCTCATAGGTGGCGCT 1362
||||||||| |||||||| |||| || | ||| |||| | || ||||||
Sbjct 11462 CGCCCAGGCCAGGTCGGCATGGCCGGTGTTGTCGTTGCGCCCTGCGGTGTAGGTGTACTG 11403
Query 1363 GCGTCCGC-TGCTGGTCATGGTCTTGCGGATAGCCATAAACGAGCTG-GTGATGTCGGTG 1420
||| |||| ||| ||| | ||||||||||| ||||| | ||| ||| | ||||||||
Sbjct 11402 GCGACCGCCTGC-GGTGACCGTCTTGCGGATCGCCATCATCGA-CTGCGCCATGTCGGTC 11345
Query 1421 GCGCTGACGTCATATTCCAGACAGCCACGGCGGATGACGTCTTTTGCCTTGAGCACCATT 1480
| | |||| | ||||| | ||| |||| ||||| | ||||| |||||||
Sbjct 11344 CACCCGGCGTCGAACTCCAGCCGGCCGTTATGGATCACGTCATAGGCCTTCAGCACCA-G 11286
Query 1481 GCG-GTTTTCATTTCCGGCGTGTAGCGGATATCGCGCGCGGCGGGATAGAACGAGCGCAC 1539
||| ||||| | ||| |||| |||| || | | | || || ||||| ||||||
Sbjct 11285 GCGTGTTTTGACTTCGGGCGAATAGCTGAAGGTGGTCACAGCCGGGAAGAACTGGCGCAC 11226
Query 1540 GAGCTGGAACACGCCGACACCGAGGCCGGTGGCATCAATACCGATGTATTCGACGTTGTA 1599
||||| ||||||| ||| || |||||| ||||||| ||||| || || |||
Sbjct 11225 CAGCTGCGCCACGCCGCTACCCAGCCCGGTGACATCAATCCCGATATAGGTCACCCAGTA 11166
Query 1600 TTTTTCGGTGAGTTTGCGGATGGATTCCGCCTGAGTGGCAAAGTCCATGCCTTTCCACTG 1659
||| || || ||| || ||||||| | |||||||||||||| | ||
Sbjct 11165 GCGGTCGCAGACGTTTTTGATAAATGCCGCCTGGGCCGCAAAGTCCATGCCCCGGAATTG 11106
Query 1660 GTGACGCTCAAGTATTCTGAATTTGCCACCGGCCACCACCGGCGGTGCCAGTACCACGCA 1719
||| ||||| || | | ||||||||| || | |||| |||||| || | |||||
Sbjct 11105 GTGCCGCTCCAGGACGCGGAATTTGCCGCCCGGTACCAGCGGCGGCGCAACCACCACCAG 11046
Query 1720 TCCGGCGCTGTCGCCACGGTGT--GACGGGTCGTAACCAATCCAGACCGGGCGGGAGCCG 1777
|||| || || | |||| | | |||||||| || ||||| ||| | ||| |||
Sbjct 11045 CCCGGAGCAATCAC--CGGTTTCCGCTGGGTCGTAGCCGATCCATACCTGACGGTCACCG 10988
Query 1778 AACGGATTGGCGGCAAACGGCGCATAG---TCTTCCCATTCTTCCAGCGTGTCGACCATG 1834
||||| ||| || ||| ||| ||| ||||||| || |||||||||||
Sbjct 10987 AACGGCCGCATGGCGAATGGCTTGTAGTCCTCTGCCCATTCAACCCAACTGTCGACCATG 10928
Query 1835 CAGCGTTGCAGCTCCTCGAACGGGA--ATACCGACGCCTTGTCGTCAACAAATTCACACA 1892
|||| |||||| | | ||||| | || | | | || ||||||||||| |||||||
Sbjct 10927 CAGCTCTGCAGCAACGCCAACGGAAAGATGCTGGCTCC--ATCGTCAACAAACTCACACA 10870
Query 1893 TGAACAGGTTTTTAAAATCGTCGGCGCTGTTTTCGCGTTTAAGCTGCTCAATGTCGAACA 1952
| |||||||| || | || | ||||| || || | || ||||||||||||||
Sbjct 10869 TCAACAGGTTGGCGAACGCCTCAGGGCTGTACTCCCGACGCAACTCCTCAATGTCGAACA 10810
Query 1953 ATGTGCAGCCACCTTTCAGGGCGTCCTCAATGGTGACAATCTGCCGCCACTGGCCGTCCG 2012
||||| || | | |||||| |||||||| |||||||||||| | ||||
Sbjct 10809 GATCACAGCCGCCGTGCTCTGCGTCCAGGATGGTGACGATCTGCCGCCACAACCGGTCCT 10750
Query 2013 CACAGAGAAGACCTCCGGCAAGGGCGTTATGACTGACGTCGATTTCCACGCGTTCGGCGG 2072
| |||| | || || || || ||||||| | | ||| |||
Sbjct 10749 CGCAGAACCGCCCCTGTTGGAGCGCCCCGTGGGAAACGTCGACCTTGGTGTGTT--GCGC 10692
Query 2073 CGCTGGCGCGTCCCCGGTTAAACAGTTCACCGGACCAGAACGGATAGGCGTCGTGCGCCA 2132
||||||| ||| ||| || | || |||| |||||| | ||||| || || ||||
Sbjct 10691 CGCTGGC-TTACCCTTGTTGAAGCGCTCGCCGGTCCAGAAGGTGTAGGCCTCATGGGCCA 10633
Query 2133 GCGTGGACGGGGTGGAGAAATAGGTCGAGCGCAGGTGACTCTGTGAGGCCATACCTGATG 2192
||||||| || ||||| ||||| |||| | | || |||||| || || |
Sbjct 10632 TGCTGGACGGCGTCGAGAAGTAGGTTTTGCGCCACTTCTTGTGCATGGCCATGCCCGAAG 10573
Query 2193 CCACCTTACGCAGTACCTGAAAATTCGGGATCCAGAAAATCTCGTCGACGTACAGGTCGC 2252
| ||||| |||| ||| ||| || ||||||| | ||||||| ||| | | ||
Sbjct 10572 CGACCTTGTTCAGTTCCTCAAACTTGAACGTCCAGAAGAATTCGTCGAAGTAGAAATTGC 10513
Query 2253 CGTTATGGCTCTGTGCGGTGTTGGAGTTGGTGCCGAGAAAAATCAGTTTTGCGCCGTTAT 2312
||| | || ||| ||||| | ||||| ||||| |||| ||| | |||||| |
Sbjct 10512 CGTGGTAGCCCTGGGCGGTACGCGCATTGGTACCGAGGAAAAACAGCTCGGCGCCG---T 10456
Query 2313 TGCCCAGGACAATCGGGTCACCGGTCAG---GTCAACGTCAACCAGCCGGGCAAAGGCGA 2369
|| || || || || || || ||||| | || || |||| |||||||| ||
Sbjct 10455 TGGGCAATACGATGGGATCCCCCGTCAGCTCGACACCGATAACCTCACGGGCAAATGCCT 10396
Query 2370 TGATGTATTCACGGAACACATACGCCTGCGTTTTACTGGCCGACAGAAAAATCTGGTTAT 2429
|||||| | || |||| ||| || || |||| || ||||| || ||||| ||
Sbjct 10395 GGATGTACCCGCGAAACAGATAGGCTTGGTTTTTCGATGCGGACAGGAAGATCTGATTGC 10336
Query 2430 GACCGGTTTTCAGGGCGCGCAGCAGCGCCTCGCGGGAAAAATAAAACGTCGCGCCAATCT 2489
| ||||||| ||| || || | ||||||||||| ||| ||| | |||||||| ||||
Sbjct 10335 GCCCGGTTTCCAGCGCATCAAGAAACGCCTCGCGGGCAAAGTAATAGGTCGCGCCGATCT 10276
Query 2490 GGCGGGATTTCAGGATATCGCGGATGCGGTGCT--CAAGCCCGGCGCGATACCAGTGCAA 2547
| ||| ||| ||||| |||| | || || | | ||||||| |||||||
Sbjct 10275 GCCGGCTTTTGAGGATGACGCGAGTCCGTTGATTGCCAGCCCGG-----TACCAGTCTTT 10221
Query 2548 CTGATATTCGAAAGACTGCTCAAAGAAAATCTGCTC-CAGCTTTTCGATGGCCTCGTCAC 2606
||| || |||||| | || | ||| || | | || | ||||| ||| || |
Sbjct 10220 CTGGTAGTCGAAACAGCCGTC-GATAAACGCTTCACGCAACAGCTCGATCTGCTCTTCGC 10162
Query 2607 TGAAAAAATTCTTTTTCGGTTTGCGACGCCCG-CCTTTGTTGCGGTTAGCGACGTTCGGA 2665
||| | || |||| ||| | | | | || | |||||| ||||| | ||| ||
Sbjct 10161 TGATATCGTT-TTTTGGGGTCTTTTTCTTCGGACCCTCGTTGCGTTTAGCCAGGTTAGGG 10103
Query 2666 TTAAGGTCTGCCTCGTTGCCGGTCTGACTGTAA-CGGTTGACCCGTGCCAGTCGTTCAAT 2724
|| || || | ||| | || | | ||| || || | | | ||| | ||||| |
Sbjct 10102 TTGAGCTCGGTTTCGGTACC-GCCGCCCTGAAAGCGCTGAATTCTGGCCTGGCGTTCCAA 10044
Query 2725 CTGGCGTCCGAGCAGGTCAATTTCCTTGAAGTCACCGCCGGTTTTCTGCGGT--TTGATG 2782
||||| ||||| ||||||||||||||||| |||||| | | ||| | |||| |
Sbjct 10043 TTGGCGGTGCAGCAGATCAATTTCCTTGAAGTCCCCGCCGCTCT--TGCTTTCCTTGAGG 9986
Query 2783 ATGAGCTGGGTCAGCCGCGCTTCCAG 2808
|| ||||| || ||||||||||||
Sbjct 9985 ATCAGCTGCACCAACCGCGCTTCCAG 9960
Score = 179 bits (198), Expect = 7e-41
Identities = 219/299 (73%), Gaps = 0/299 (0%)
Strand=Plus/Minus
Query 4744 ATTGAGCCGTGGTATCAGGAAGACCCTGACCTTGTGGTGATTGTGGGGCGTCAGCTGCTG 4803
|||| ||||||||| |||||||||||||| || |||||||| || || || ||||||
Sbjct 8111 ATTGCGCCGTGGTACCAGGAAGACCCTGATCTGGTGGTGATCTGCGGTCGCCAACTGCTG 8052
Query 4804 GCGGACAAATATTTCCCCATCGTCAACAGGGAGCAGGACAACAGCGAAATGCTGGCCGCT 4863
|| ||||| |||||||| ||| |||||| || | | | ||||||||||||||
Sbjct 8051 GCCGACAAGTATTTCCCGATCATCAACAAAGACAACGCGCCGACTGAAATGCTGGCCGCC 7992
Query 4864 GACGTCATCATCAGCCAGAAACGCATCGGTAACCTGCCGGCGGTACGCGTCCCGTACTTC 4923
|| || ||| ||| || || ||| | || || |||| || || ||||| || ||||||
Sbjct 7991 GATATCGTCACCAGTCAAAAGCGCTTGGGCAATTTGCCAGCCGTGCGCGTGCCTTACTTC 7932
Query 4924 CCGGCGGATGCGATGCTCATCACGAAGCTGGAAAACCTGTCCATCTACTACATGGATGAC 4983
||| || | | |||| |||| ||||||||||||||||| ||||||| ||| | |
Sbjct 7931 CCGCCGCGCGGGTTGCTGGTCACCAAGCTGGAAAACCTGTCGATCTACTGGCAGGAAGGC 7872
Query 4984 AGCCATCGCCGCGTGATTGAGGAAAACCCGAAACTCGACCGCGTGGAGAACTACGAGTC 5042
|||| |||||| | | || || | || | |||||| | || |||||||||||
Sbjct 7871 AGCCGCCGCCGCACCGTCGTCGACAATGCCAAGCGTGACCGCATCGAAAACTACGAGTC 7813
Score = 100 bits (110), Expect = 6e-17
Identities = 133/185 (72%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 558 TCGATATCGTTGCGATCCTGCACGGCATCGGTAACGTACATGATGTATCCGGCATGTGCG 617
||||||||| | | ||| |||||||||| | ||| | ||| | ||||| || |
Sbjct 12192 TCGATATCGGTTTCAGTCTGTGCGGCATCGGTCATGTAGAGAATGAAGCCGGCGTGACTG 12133
Query 618 CCGTTTTCGTAATACTTGCGGCGGAACAGCGTGGCCGACTCATTCAGCCAGGCAGAGTTA 677
|| || ||||| |||||||||||||||| ||||||||| || || ||| | || || |
Sbjct 12132 CCATTCTCGTAGTACTTGCGGCGGAACAACGTGGCCGATTCGTTGAGCAACGCCGACTGC 12073
Query 678 AGGGCGCTGAGATATTCCGGCAGGCCGTACAGCTCCTGATTAATATCCGGCTCCAGCAGG 737
| ||| || | | ||||||| ||| || | |||||| | | ||||| || ||||
Sbjct 12072 AAGGCACTAATCCACTCCGGCAAGCCATAAATCTCCTGGTGCAAATCCGCTTCTCGCAGA 12013
Query 738 TGAAA 742
|||||
Sbjct 12012 TGAAA 12008
>seq2959876
Length=477
Score = 147 bits (162), Expect = 4e-31
Identities = 252/365 (69%), Gaps = 12/365 (3%)
Strand=Plus/Minus
Query 11395 GAAAAAACGCCGGTCAGGATTCGTGAACTGTGGAACCCGGACACCTGCCCGGCAAATCTG 11454
|| |||||| ||| | |||| || || | ||| | || |||||||||| | || ||
Sbjct 363 GAGAAAACGATTGTCCCGCTTCGCGACCTCTACAACGCTGATACCTGCCCGGTACATTTG 304
Query 11455 CTGCCGTGGCTGGCGTGGGCGTTTTCGGTCGACAGGTGGGATGAAAAGTGGCCGGAAGCG 11514
|||||| ||||| ||||| | ||||| || | |||||| | ||| | || |||
Sbjct 303 CTGCCGCATCTGGCATGGGCATGGTCGGTGGATCGCTGGGATTACCGATGGACCGAGGCG 244
Query 11515 ACCAAACGTGCCGTTATCCGCGATGCCTATTTCATCCACTGTCATAAAGGCACTATCGGC 11574
|||||||| |||| ||| | | |||| ||| || || || ||||| ||||||
Sbjct 243 ACCAAACGCGCCGCCATCAAGGCCTCTTATTACATACATGCCCACAAGGGCACCATCGGC 184
Query 11575 GCAATCCGGCGTGTGGTGGAGCCGCTCGGCTATCTCATTAACGTGACGGAGTGGTGGGAA 11634
|| | || |||||||| ||||| || ||||| || || | | | |||||||
Sbjct 183 GCGTTACGCCGTGTGGTAGAGCCTCTGGGCTACCTGATCGAGATTATCGAGTGGT---TC 127
Query 11635 AACA-GTGACCCG--------CCAGGCACCTTCCGGCTTGATATTGGTGTACTGGAAAGC 11685
|||| | | |||| ||||||||||| | | | | || || |||| | |
Sbjct 126 AACATGAGGCCCGAAGGGACCCCAGGCACCTTTGCGTTAAAGGTCGGGGTGTTGGACACC 67
Query 11686 GGTATCACAGAGGCAATGTATCAGGAAATGGAACGGCTGATTGCTGATGCCAAACCTGCA 11745
|||||||| |||| |||||||||||| |||| |||||||||| ||| ||||| || |
Sbjct 66 GGTATCACTGAGGAAATGTATCAGGAGCTGGAGCGGCTGATTGATGACGCCAAGCCCGTC 7
Query 11746 AGCCG 11750
|||||
Sbjct 6 AGCCG 2
>seq3084702
Length=3045
Score = 138 bits (152), Expect = 2e-28
Identities = 251/367 (68%), Gaps = 8/367 (2%)
Strand=Plus/Minus
Query 11395 GAAAAAACGCCGGTCAGGATTCGTGAACTGTGGAACCCGGACACCTGCCCGGCAAATCTG 11454
|| |||||| ||| | |||| || || | ||| | || |||||||||| || ||
Sbjct 2931 GAGAAAACGATTGTCCCGCTTCGCGACCTCTACAACGCTGATACCTGCCCGGTGCATTTG 2872
Query 11455 CTGCCGTGGCTGGCGTGGGCGTTTTCGGTCGACAGGTGGGATGAAAAGTGGCCGGAAGCG 11514
|||||| ||||| ||||| | ||||| || | |||||| | ||| | || |||
Sbjct 2871 CTGCCGCATCTGGCCTGGGCTTGGTCGGTGGATCGCTGGGATTACCGATGGACAGAGGCG 2812
Query 11515 ACCAAACGTGCCGTTATCCGCGATGCCTATTTCATCCACTGTCATAAAGGCACTATCGGC 11574
||||| ||||||| ||| | | |||| |||||| || || || |||||||||
Sbjct 2811 ACCAAGCGTGCCGCCATCAAGGCCTCTTATTACATCCATGCCCACAAGGGAACTATCGGC 2752
Query 11575 GCAATCCGGCGTGTGGTGGAGCCGCTCGGCTATCTCATTAACGTGACGGAGTGGTGGGAA 11634
|| | || |||||||| ||||| || ||||| || ||| | | | ||||||| ||
Sbjct 2751 GCCTTGCGTCGTGTGGTTGAGCCTCTGGGCTACCTGATTGAAATCATCGAGTGGT-TTAA 2693
Query 11635 AACAGTGACC-------CGCCAGGCACCTTCCGGCTTGATATTGGTGTACTGGAAAGCGG 11687
| ||| || ||||||| || || | | | |||| || || |||
Sbjct 2692 CGCTGTGCCCGAGGGCACGCCAGGGACATTTGCGTTGAAGGTTGGCGTGAGTGATTCCGG 2633
Query 11688 TATCACAGAGGCAATGTATCAGGAAATGGAACGGCTGATTGCTGATGCCAAACCTGCAAG 11747
|||||| || | ||||||||||| |||| |||||| | | ||| ||||| |||| |||
Sbjct 2632 TATCACCGAAGAGATGTATCAGGAGCTGGAGCGGCTGGTCGATGACGCCAAGCCTGTAAG 2573
Query 11748 CCGCCAC 11754
|||||||
Sbjct 2572 CCGCCAC 2566
>seq3063309
Length=1409
Score = 100 bits (110), Expect = 6e-17
Identities = 203/296 (69%), Gaps = 8/296 (3%)
Strand=Plus/Minus
Query 2222 ATCCAGAAAATCTCGTCGACGTACAGGTCGCCGTTATGGCTCTGTGCGGTGTTGGAGTTG 2281
||||| ||| ||| |||||||| | || ||| | | || ||| |||||| || |||
Sbjct 292 ATCCAAAAATACTCATCGACGTAGACGTGGCCATGGTAGCCCTGGGCGGTGCTGCTATTG 233
Query 2282 GT-GCCGAGAAAAATCAGTTTTGCGCCGTTATTGCCCAGGACAATCGGGTCACCGGTCAG 2340
|| | | ||||| ||| | |||||||| || | || |||||| ||||||||
Sbjct 232 GTCGACAAGAAACG-CAGCTCGGCGCCGTTGCTGAGCGTGA---TCGGGTTGCCGGTCAG 177
Query 2341 GTCAACGTC-AACCA--GCCGGGCAAAGGCGATGATGTATTCACGGAACACATACGCCTG 2397
|| | ||| ||||| || ||||| ||||||||| ||||| | | || |||
Sbjct 176 CTCGATGTCGAACCACTGCTTTGCAAACTGGATGATGTAACTGCGGAAAATTTCCGACTG 117
Query 2398 CGTTTTACTGGCCGACAGAAAAATCTGGTTATGACCGGTTTTCAGGGCGCGCAGCAGCGC 2457
|| ||||||||||| || | |||||| | ||||| || |||| || | |||
Sbjct 116 CGAGCGGCTGGCCGACAGGAACACCTGGTTGTCGCCGGTCAGCACGGCGTCCATGAACGC 57
Query 2458 CTCGCGGGAAAAATAAAACGTCGCGCCAATCTGGCGGGATTTCAGGATATCGCGGA 2513
|||| || || || ||||| ||| | ||||||| ||||||||| | |||||
Sbjct 56 TTCGCCGGCGAAGTAGTACGTCAGGCCCACCTGGCGGCTTTTCAGGATGTTGCGGA 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 100635753855972
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