Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09] 3,088,511 sequences; 2,785,377,831 total letters Query= NC_005056.1 Length=32684 Score E Sequences producing significant alignments: (Bits) Value seq3088488 365 9e-97 seq3088503 356 5e-94 seq2959876 147 4e-31 seq3084702 138 2e-28 seq3063309 100 6e-17 >seq3088488 Length=17142 Score = 365 bits (404), Expect = 9e-97 Identities = 784/1155 (68%), Gaps = 44/1155 (4%) Strand=Plus/Minus Query 15842 GACTATCATCACGGCGTGCAGGTGCTGGAGATTAACGAGGGCACCCGCGTCATTTCCACC 15901 || |||| |||||||||| ||| | || | ||||| ||||||||| |||| ||| Sbjct 16622 GATTATCTCCACGGCGTGCGGGTCATCGAACTCAACGACGGCACCCGCCCCATTCGCACT 16563 Query 15902 GTATCCACCGCCATTGTTGGCATGGTCTGCACGGCCAGCGATGCGGATGCGGAAATCTTC 15961 | ||||||| | | |||||||| ||||| || |||||||| | | ||| Sbjct 16562 ATTCCCACCGCAGTCATCGGCATGGTTTGCACCGCTGAAGATGCGGACCCACTCGTTTTC 16503 Query 15962 CCCCTCAATAAACCGGTACTGATTACCAATGTGCAGAGTGCAATTGCAAAGGCCGGTAAA 16021 || || | | || || || || ||||| ||||| | || | | |||||||| Sbjct 16502 CCTCTGGACACTCCAGTCCTCATCACCAACGTGCAAACCGCCGTCGGCAAGGCCGGCGTC 16443 Query 16022 AAAGGCACGCTGGCGGCGTCGTTGCAGGCTATCGCCGACCAGTCAAAACCGGTCACCGTT 16081 || ||||| ||||| || |||| | |||||||||||| | || || | || ||| Sbjct 16442 AAGGGCACCCTGGCTGCCAGCCTGCAAGGCATCGCCGACCAGACCAAGCC--TTAC-GTT 16386 Query 16082 GTCGT---ACGTGTGGAAGACGGCACCGGCGAAGACGAAGAA-ACGAAACTCGCGCAGAC 16137 |||| ||| || |||| ||| | | ||||| ||| || |||| ||| | || Sbjct 16385 ATCGTGGTACGGGTCAAAGAAGGCGCTGACGAAG-CGACGACTACGAG---CGCCCTGAT 16330 Query 16138 CGTTTCCAATATCATCGGCACCACTGACGAAAACGGTCAGTACACCGGACTGAAGGCCCT 16197 | ||| || || || || |||||| |||||||| |||| || || Sbjct 16329 TGG------------CGGTACAAC--ACCAAC-CGGTCAATACACCGGCATGAAAGCTCT 16285 Query 16198 GCTGGCGGCAGAGTCGGTAACCGGTG----TTAAACCGCGTATTCTCGGCGTGCCGGGAC 16253 ||| || || | || || ||| | | |||||||| || |||||||| || | Sbjct 16284 GCTCGCAGCCAAATC----ACGCGTGGGCATGACTCCGCGTATCCTTGGCGTGCCAGGCC 16229 Query 16254 TGGACACCAAAGAGGTGGCTGTTGCACT-GGCATCAGTCTGTCAGA-AGCTGCGCGCTTT 16311 | |||| || || || || ||| || || | || | | |||||||| || Sbjct 16228 TCGACAGTTTGCCAGTAGCCACCGCCCTCGGCGCCA-TC-GCCAAAGACCTGCGCGCCTT 16171 Query 16312 CGGGTATATCAGCGCATGGGGCTGTAAAACCATTTCCGAGGTGAAAGCCTACCGCCAGAA 16371 | || | ||||| ||| ||| ||||||| ||||| || |||||| |||| Sbjct 16170 TGCATACGTAAGCGCCTGGAACTGCAAAACCAAGGAAGAGGTAGTGGCGTACCGCGAGAA 16111 Query 16372 TTTCAGCCAGCGTGAGCTGATGGTCATCTGGCCGGATTTCCTCGCATGGGATACGGTCGC 16431 ||| | || || ||||||| || |||||||| ||||| ||||| || ||| | Sbjct 16110 CTTCGGTGCCCGCGAAATGATGGTGATTTGGCCGGACTTCCTGAACTGGGACACTGTCAC 16051 Query 16432 CAGTACCACCGCCACCGCGTATGCCACCGCCCGTGCGCTGGGTCTGCGCGCTAAAATCGA 16491 || | ||||||| ||| | ||| ||||| || || || || ||||| || ||||| Sbjct 16050 CAACAAGACCGCCAGCGCTTCGGCCGTGGCCCGCGCCCTCGGCCTTCGCGCCAAGATCGA 15991 Query 16492 CCAGGAGCAGGGCTGGCATAAAACGCTGTCCAACGTCGGGGTGAACGGTGTTACCGGCAT 16551 ||| ||| ||| ||||||||||| ||||||||||| | |||| || || ||||| || Sbjct 15990 CCAAGAGACGGGTTGGCATAAAACCCTGTCCAACGTGGCCGTGAGTGGCGTGACCGGTAT 15931 Query 16552 CAGCGCGTCCGTATTCTGGGATTTGCAGGAGTCCGGCACCGATGCTGACCTGCTTAACGA 16611 |||||| ||| ||||||||| |||| | | | |||||| || || || ||| | Sbjct 15930 CAGCGCCGACGTGTTCTGGGATCTGCAAAACCCAGCCACCGACGCCAACTACCTCAAC-A 15872 Query 16612 GTCA-GGCGTCACAACGCTGAT--TCGCCGTGACGGTTTCCGCTTCTGGGGTAACCGTAC 16668 | | | |||||| || ||||| |||| ||||||| ||||||||||||| ||| || Sbjct 15871 GCAACGACGTCACCACCCTGATCAACGCC--AACGGTTTTCGCTTCTGGGGTAGCCGCAC 15814 Query 16669 CTGCTCTGATGATCCGCTGTTCCTCTTTGAAAACTACACCCGCACCGCGCAGGTGCTGGC 16728 |||| |||||| ||| ||||| ||| |||||||||||||||||||||||| | || || Sbjct 15813 CTGCAGTGATGACCCGTTGTTCGCCTTCGAAAACTACACCCGCACCGCGCAGATCCTCGC 15754 Query 16729 CGACACGATGGCTGAGGCGCACATGTGGGCGGTGGACAAGCCCATCACCGCAACGCTGAT 16788 ||||| |||| || |||||||||||||| || ||| || || ||| | ||| | Sbjct 15753 GGACACCATGGGCGAAGCGCACATGTGGGCAGTTGACCGCCCTATGCACGCCTCCCTGGT 15694 Query 16789 TCGCGACATCGTTGACGGCATCAATGCCAAATTCCGTGAGCTGAAAACAAACGGCTATAT 16848 |||||| | || || ||| | | ||||| | || ||| ||||| | | ||||| | Sbjct 15693 ACGCGACCTGGTCGAAGGCGTAAGCGCCAAGATGCGCGAGTTGAAATCCCAGGGCTACCT 15634 Query 16849 CGTGGATGCGACCTGCTGGTTCAGCGAAGAGTCCAACGATGCGGAAACCCTCAAGGCCGG 16908 | | | | |||||| | || || |||| || |||||||||||||| Sbjct 15633 GATCGGCGGCAGTTGCTGGAACCCGGACGACATCAACACCAAAGACACCCTCAAGGCCGG 15574 Query 16909 AAAACTGTATATCGACTACGACTATACCCCGGTGCCTCCTCTTGAAAATCTGACCCTGCG 16968 || || | | || |||||||| ||||| ||||| || |||||| | || ||| | || Sbjct 15573 CAAGCTCTGGCTTGATTACGACTACACCCCCGTGCCGCCACTTGAAGACCTCACCTTCCG 15514 Query 16969 CCAGCGCATTACCGA 16983 |||||| || ||||| Sbjct 15513 CCAGCGAATCACCGA 15499 >seq3088503 Length=21467 Score = 356 bits (394), Expect = 5e-94 Identities = 1011/1526 (66%), Gaps = 43/1526 (3%) Strand=Plus/Minus Query 1303 CGCCCAGGCGAGGTCGGCGTGGCTGGCTTCCTCGCTGCGGCTGGCCTCATAGGTGGCGCT 1362 ||||||||| |||||||| |||| || | ||| |||| | || |||||| Sbjct 11462 CGCCCAGGCCAGGTCGGCATGGCCGGTGTTGTCGTTGCGCCCTGCGGTGTAGGTGTACTG 11403 Query 1363 GCGTCCGC-TGCTGGTCATGGTCTTGCGGATAGCCATAAACGAGCTG-GTGATGTCGGTG 1420 ||| |||| ||| ||| | ||||||||||| ||||| | ||| ||| | |||||||| Sbjct 11402 GCGACCGCCTGC-GGTGACCGTCTTGCGGATCGCCATCATCGA-CTGCGCCATGTCGGTC 11345 Query 1421 GCGCTGACGTCATATTCCAGACAGCCACGGCGGATGACGTCTTTTGCCTTGAGCACCATT 1480 | | |||| | ||||| | ||| |||| ||||| | ||||| ||||||| Sbjct 11344 CACCCGGCGTCGAACTCCAGCCGGCCGTTATGGATCACGTCATAGGCCTTCAGCACCA-G 11286 Query 1481 GCG-GTTTTCATTTCCGGCGTGTAGCGGATATCGCGCGCGGCGGGATAGAACGAGCGCAC 1539 ||| ||||| | ||| |||| |||| || | | | || || ||||| |||||| Sbjct 11285 GCGTGTTTTGACTTCGGGCGAATAGCTGAAGGTGGTCACAGCCGGGAAGAACTGGCGCAC 11226 Query 1540 GAGCTGGAACACGCCGACACCGAGGCCGGTGGCATCAATACCGATGTATTCGACGTTGTA 1599 ||||| ||||||| ||| || |||||| ||||||| ||||| || || ||| Sbjct 11225 CAGCTGCGCCACGCCGCTACCCAGCCCGGTGACATCAATCCCGATATAGGTCACCCAGTA 11166 Query 1600 TTTTTCGGTGAGTTTGCGGATGGATTCCGCCTGAGTGGCAAAGTCCATGCCTTTCCACTG 1659 ||| || || ||| || ||||||| | |||||||||||||| | || Sbjct 11165 GCGGTCGCAGACGTTTTTGATAAATGCCGCCTGGGCCGCAAAGTCCATGCCCCGGAATTG 11106 Query 1660 GTGACGCTCAAGTATTCTGAATTTGCCACCGGCCACCACCGGCGGTGCCAGTACCACGCA 1719 ||| ||||| || | | ||||||||| || | |||| |||||| || | ||||| Sbjct 11105 GTGCCGCTCCAGGACGCGGAATTTGCCGCCCGGTACCAGCGGCGGCGCAACCACCACCAG 11046 Query 1720 TCCGGCGCTGTCGCCACGGTGT--GACGGGTCGTAACCAATCCAGACCGGGCGGGAGCCG 1777 |||| || || | |||| | | |||||||| || ||||| ||| | ||| ||| Sbjct 11045 CCCGGAGCAATCAC--CGGTTTCCGCTGGGTCGTAGCCGATCCATACCTGACGGTCACCG 10988 Query 1778 AACGGATTGGCGGCAAACGGCGCATAG---TCTTCCCATTCTTCCAGCGTGTCGACCATG 1834 ||||| ||| || ||| ||| ||| ||||||| || ||||||||||| Sbjct 10987 AACGGCCGCATGGCGAATGGCTTGTAGTCCTCTGCCCATTCAACCCAACTGTCGACCATG 10928 Query 1835 CAGCGTTGCAGCTCCTCGAACGGGA--ATACCGACGCCTTGTCGTCAACAAATTCACACA 1892 |||| |||||| | | ||||| | || | | | || ||||||||||| ||||||| Sbjct 10927 CAGCTCTGCAGCAACGCCAACGGAAAGATGCTGGCTCC--ATCGTCAACAAACTCACACA 10870 Query 1893 TGAACAGGTTTTTAAAATCGTCGGCGCTGTTTTCGCGTTTAAGCTGCTCAATGTCGAACA 1952 | |||||||| || | || | ||||| || || | || |||||||||||||| Sbjct 10869 TCAACAGGTTGGCGAACGCCTCAGGGCTGTACTCCCGACGCAACTCCTCAATGTCGAACA 10810 Query 1953 ATGTGCAGCCACCTTTCAGGGCGTCCTCAATGGTGACAATCTGCCGCCACTGGCCGTCCG 2012 ||||| || | | |||||| |||||||| |||||||||||| | |||| Sbjct 10809 GATCACAGCCGCCGTGCTCTGCGTCCAGGATGGTGACGATCTGCCGCCACAACCGGTCCT 10750 Query 2013 CACAGAGAAGACCTCCGGCAAGGGCGTTATGACTGACGTCGATTTCCACGCGTTCGGCGG 2072 | |||| | || || || || ||||||| | | ||| ||| Sbjct 10749 CGCAGAACCGCCCCTGTTGGAGCGCCCCGTGGGAAACGTCGACCTTGGTGTGTT--GCGC 10692 Query 2073 CGCTGGCGCGTCCCCGGTTAAACAGTTCACCGGACCAGAACGGATAGGCGTCGTGCGCCA 2132 ||||||| ||| ||| || | || |||| |||||| | ||||| || || |||| Sbjct 10691 CGCTGGC-TTACCCTTGTTGAAGCGCTCGCCGGTCCAGAAGGTGTAGGCCTCATGGGCCA 10633 Query 2133 GCGTGGACGGGGTGGAGAAATAGGTCGAGCGCAGGTGACTCTGTGAGGCCATACCTGATG 2192 ||||||| || ||||| ||||| |||| | | || |||||| || || | Sbjct 10632 TGCTGGACGGCGTCGAGAAGTAGGTTTTGCGCCACTTCTTGTGCATGGCCATGCCCGAAG 10573 Query 2193 CCACCTTACGCAGTACCTGAAAATTCGGGATCCAGAAAATCTCGTCGACGTACAGGTCGC 2252 | ||||| |||| ||| ||| || ||||||| | ||||||| ||| | | || Sbjct 10572 CGACCTTGTTCAGTTCCTCAAACTTGAACGTCCAGAAGAATTCGTCGAAGTAGAAATTGC 10513 Query 2253 CGTTATGGCTCTGTGCGGTGTTGGAGTTGGTGCCGAGAAAAATCAGTTTTGCGCCGTTAT 2312 ||| | || ||| ||||| | ||||| ||||| |||| ||| | |||||| | Sbjct 10512 CGTGGTAGCCCTGGGCGGTACGCGCATTGGTACCGAGGAAAAACAGCTCGGCGCCG---T 10456 Query 2313 TGCCCAGGACAATCGGGTCACCGGTCAG---GTCAACGTCAACCAGCCGGGCAAAGGCGA 2369 || || || || || || || ||||| | || || |||| |||||||| || Sbjct 10455 TGGGCAATACGATGGGATCCCCCGTCAGCTCGACACCGATAACCTCACGGGCAAATGCCT 10396 Query 2370 TGATGTATTCACGGAACACATACGCCTGCGTTTTACTGGCCGACAGAAAAATCTGGTTAT 2429 |||||| | || |||| ||| || || |||| || ||||| || ||||| || Sbjct 10395 GGATGTACCCGCGAAACAGATAGGCTTGGTTTTTCGATGCGGACAGGAAGATCTGATTGC 10336 Query 2430 GACCGGTTTTCAGGGCGCGCAGCAGCGCCTCGCGGGAAAAATAAAACGTCGCGCCAATCT 2489 | ||||||| ||| || || | ||||||||||| ||| ||| | |||||||| |||| Sbjct 10335 GCCCGGTTTCCAGCGCATCAAGAAACGCCTCGCGGGCAAAGTAATAGGTCGCGCCGATCT 10276 Query 2490 GGCGGGATTTCAGGATATCGCGGATGCGGTGCT--CAAGCCCGGCGCGATACCAGTGCAA 2547 | ||| ||| ||||| |||| | || || | | ||||||| ||||||| Sbjct 10275 GCCGGCTTTTGAGGATGACGCGAGTCCGTTGATTGCCAGCCCGG-----TACCAGTCTTT 10221 Query 2548 CTGATATTCGAAAGACTGCTCAAAGAAAATCTGCTC-CAGCTTTTCGATGGCCTCGTCAC 2606 ||| || |||||| | || | ||| || | | || | ||||| ||| || | Sbjct 10220 CTGGTAGTCGAAACAGCCGTC-GATAAACGCTTCACGCAACAGCTCGATCTGCTCTTCGC 10162 Query 2607 TGAAAAAATTCTTTTTCGGTTTGCGACGCCCG-CCTTTGTTGCGGTTAGCGACGTTCGGA 2665 ||| | || |||| ||| | | | | || | |||||| ||||| | ||| || Sbjct 10161 TGATATCGTT-TTTTGGGGTCTTTTTCTTCGGACCCTCGTTGCGTTTAGCCAGGTTAGGG 10103 Query 2666 TTAAGGTCTGCCTCGTTGCCGGTCTGACTGTAA-CGGTTGACCCGTGCCAGTCGTTCAAT 2724 || || || | ||| | || | | ||| || || | | | ||| | ||||| | Sbjct 10102 TTGAGCTCGGTTTCGGTACC-GCCGCCCTGAAAGCGCTGAATTCTGGCCTGGCGTTCCAA 10044 Query 2725 CTGGCGTCCGAGCAGGTCAATTTCCTTGAAGTCACCGCCGGTTTTCTGCGGT--TTGATG 2782 ||||| ||||| ||||||||||||||||| |||||| | | ||| | |||| | Sbjct 10043 TTGGCGGTGCAGCAGATCAATTTCCTTGAAGTCCCCGCCGCTCT--TGCTTTCCTTGAGG 9986 Query 2783 ATGAGCTGGGTCAGCCGCGCTTCCAG 2808 || ||||| || |||||||||||| Sbjct 9985 ATCAGCTGCACCAACCGCGCTTCCAG 9960 Score = 179 bits (198), Expect = 7e-41 Identities = 219/299 (73%), Gaps = 0/299 (0%) Strand=Plus/Minus Query 4744 ATTGAGCCGTGGTATCAGGAAGACCCTGACCTTGTGGTGATTGTGGGGCGTCAGCTGCTG 4803 |||| ||||||||| |||||||||||||| || |||||||| || || || |||||| Sbjct 8111 ATTGCGCCGTGGTACCAGGAAGACCCTGATCTGGTGGTGATCTGCGGTCGCCAACTGCTG 8052 Query 4804 GCGGACAAATATTTCCCCATCGTCAACAGGGAGCAGGACAACAGCGAAATGCTGGCCGCT 4863 || ||||| |||||||| ||| |||||| || | | | |||||||||||||| Sbjct 8051 GCCGACAAGTATTTCCCGATCATCAACAAAGACAACGCGCCGACTGAAATGCTGGCCGCC 7992 Query 4864 GACGTCATCATCAGCCAGAAACGCATCGGTAACCTGCCGGCGGTACGCGTCCCGTACTTC 4923 || || ||| ||| || || ||| | || || |||| || || ||||| || |||||| Sbjct 7991 GATATCGTCACCAGTCAAAAGCGCTTGGGCAATTTGCCAGCCGTGCGCGTGCCTTACTTC 7932 Query 4924 CCGGCGGATGCGATGCTCATCACGAAGCTGGAAAACCTGTCCATCTACTACATGGATGAC 4983 ||| || | | |||| |||| ||||||||||||||||| ||||||| ||| | | Sbjct 7931 CCGCCGCGCGGGTTGCTGGTCACCAAGCTGGAAAACCTGTCGATCTACTGGCAGGAAGGC 7872 Query 4984 AGCCATCGCCGCGTGATTGAGGAAAACCCGAAACTCGACCGCGTGGAGAACTACGAGTC 5042 |||| |||||| | | || || | || | |||||| | || ||||||||||| Sbjct 7871 AGCCGCCGCCGCACCGTCGTCGACAATGCCAAGCGTGACCGCATCGAAAACTACGAGTC 7813 Score = 100 bits (110), Expect = 6e-17 Identities = 133/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 558 TCGATATCGTTGCGATCCTGCACGGCATCGGTAACGTACATGATGTATCCGGCATGTGCG 617 ||||||||| | | ||| |||||||||| | ||| | ||| | ||||| || | Sbjct 12192 TCGATATCGGTTTCAGTCTGTGCGGCATCGGTCATGTAGAGAATGAAGCCGGCGTGACTG 12133 Query 618 CCGTTTTCGTAATACTTGCGGCGGAACAGCGTGGCCGACTCATTCAGCCAGGCAGAGTTA 677 || || ||||| |||||||||||||||| ||||||||| || || ||| | || || | Sbjct 12132 CCATTCTCGTAGTACTTGCGGCGGAACAACGTGGCCGATTCGTTGAGCAACGCCGACTGC 12073 Query 678 AGGGCGCTGAGATATTCCGGCAGGCCGTACAGCTCCTGATTAATATCCGGCTCCAGCAGG 737 | ||| || | | ||||||| ||| || | |||||| | | ||||| || |||| Sbjct 12072 AAGGCACTAATCCACTCCGGCAAGCCATAAATCTCCTGGTGCAAATCCGCTTCTCGCAGA 12013 Query 738 TGAAA 742 ||||| Sbjct 12012 TGAAA 12008 >seq2959876 Length=477 Score = 147 bits (162), Expect = 4e-31 Identities = 252/365 (69%), Gaps = 12/365 (3%) Strand=Plus/Minus Query 11395 GAAAAAACGCCGGTCAGGATTCGTGAACTGTGGAACCCGGACACCTGCCCGGCAAATCTG 11454 || |||||| ||| | |||| || || | ||| | || |||||||||| | || || Sbjct 363 GAGAAAACGATTGTCCCGCTTCGCGACCTCTACAACGCTGATACCTGCCCGGTACATTTG 304 Query 11455 CTGCCGTGGCTGGCGTGGGCGTTTTCGGTCGACAGGTGGGATGAAAAGTGGCCGGAAGCG 11514 |||||| ||||| ||||| | ||||| || | |||||| | ||| | || ||| Sbjct 303 CTGCCGCATCTGGCATGGGCATGGTCGGTGGATCGCTGGGATTACCGATGGACCGAGGCG 244 Query 11515 ACCAAACGTGCCGTTATCCGCGATGCCTATTTCATCCACTGTCATAAAGGCACTATCGGC 11574 |||||||| |||| ||| | | |||| ||| || || || ||||| |||||| Sbjct 243 ACCAAACGCGCCGCCATCAAGGCCTCTTATTACATACATGCCCACAAGGGCACCATCGGC 184 Query 11575 GCAATCCGGCGTGTGGTGGAGCCGCTCGGCTATCTCATTAACGTGACGGAGTGGTGGGAA 11634 || | || |||||||| ||||| || ||||| || || | | | ||||||| Sbjct 183 GCGTTACGCCGTGTGGTAGAGCCTCTGGGCTACCTGATCGAGATTATCGAGTGGT---TC 127 Query 11635 AACA-GTGACCCG--------CCAGGCACCTTCCGGCTTGATATTGGTGTACTGGAAAGC 11685 |||| | | |||| ||||||||||| | | | | || || |||| | | Sbjct 126 AACATGAGGCCCGAAGGGACCCCAGGCACCTTTGCGTTAAAGGTCGGGGTGTTGGACACC 67 Query 11686 GGTATCACAGAGGCAATGTATCAGGAAATGGAACGGCTGATTGCTGATGCCAAACCTGCA 11745 |||||||| |||| |||||||||||| |||| |||||||||| ||| ||||| || | Sbjct 66 GGTATCACTGAGGAAATGTATCAGGAGCTGGAGCGGCTGATTGATGACGCCAAGCCCGTC 7 Query 11746 AGCCG 11750 ||||| Sbjct 6 AGCCG 2 >seq3084702 Length=3045 Score = 138 bits (152), Expect = 2e-28 Identities = 251/367 (68%), Gaps = 8/367 (2%) Strand=Plus/Minus Query 11395 GAAAAAACGCCGGTCAGGATTCGTGAACTGTGGAACCCGGACACCTGCCCGGCAAATCTG 11454 || |||||| ||| | |||| || || | ||| | || |||||||||| || || Sbjct 2931 GAGAAAACGATTGTCCCGCTTCGCGACCTCTACAACGCTGATACCTGCCCGGTGCATTTG 2872 Query 11455 CTGCCGTGGCTGGCGTGGGCGTTTTCGGTCGACAGGTGGGATGAAAAGTGGCCGGAAGCG 11514 |||||| ||||| ||||| | ||||| || | |||||| | ||| | || ||| Sbjct 2871 CTGCCGCATCTGGCCTGGGCTTGGTCGGTGGATCGCTGGGATTACCGATGGACAGAGGCG 2812 Query 11515 ACCAAACGTGCCGTTATCCGCGATGCCTATTTCATCCACTGTCATAAAGGCACTATCGGC 11574 ||||| ||||||| ||| | | |||| |||||| || || || ||||||||| Sbjct 2811 ACCAAGCGTGCCGCCATCAAGGCCTCTTATTACATCCATGCCCACAAGGGAACTATCGGC 2752 Query 11575 GCAATCCGGCGTGTGGTGGAGCCGCTCGGCTATCTCATTAACGTGACGGAGTGGTGGGAA 11634 || | || |||||||| ||||| || ||||| || ||| | | | ||||||| || Sbjct 2751 GCCTTGCGTCGTGTGGTTGAGCCTCTGGGCTACCTGATTGAAATCATCGAGTGGT-TTAA 2693 Query 11635 AACAGTGACC-------CGCCAGGCACCTTCCGGCTTGATATTGGTGTACTGGAAAGCGG 11687 | ||| || ||||||| || || | | | |||| || || ||| Sbjct 2692 CGCTGTGCCCGAGGGCACGCCAGGGACATTTGCGTTGAAGGTTGGCGTGAGTGATTCCGG 2633 Query 11688 TATCACAGAGGCAATGTATCAGGAAATGGAACGGCTGATTGCTGATGCCAAACCTGCAAG 11747 |||||| || | ||||||||||| |||| |||||| | | ||| ||||| |||| ||| Sbjct 2632 TATCACCGAAGAGATGTATCAGGAGCTGGAGCGGCTGGTCGATGACGCCAAGCCTGTAAG 2573 Query 11748 CCGCCAC 11754 ||||||| Sbjct 2572 CCGCCAC 2566 >seq3063309 Length=1409 Score = 100 bits (110), Expect = 6e-17 Identities = 203/296 (69%), Gaps = 8/296 (3%) Strand=Plus/Minus Query 2222 ATCCAGAAAATCTCGTCGACGTACAGGTCGCCGTTATGGCTCTGTGCGGTGTTGGAGTTG 2281 ||||| ||| ||| |||||||| | || ||| | | || ||| |||||| || ||| Sbjct 292 ATCCAAAAATACTCATCGACGTAGACGTGGCCATGGTAGCCCTGGGCGGTGCTGCTATTG 233 Query 2282 GT-GCCGAGAAAAATCAGTTTTGCGCCGTTATTGCCCAGGACAATCGGGTCACCGGTCAG 2340 || | | ||||| ||| | |||||||| || | || |||||| |||||||| Sbjct 232 GTCGACAAGAAACG-CAGCTCGGCGCCGTTGCTGAGCGTGA---TCGGGTTGCCGGTCAG 177 Query 2341 GTCAACGTC-AACCA--GCCGGGCAAAGGCGATGATGTATTCACGGAACACATACGCCTG 2397 || | ||| ||||| || ||||| ||||||||| ||||| | | || ||| Sbjct 176 CTCGATGTCGAACCACTGCTTTGCAAACTGGATGATGTAACTGCGGAAAATTTCCGACTG 117 Query 2398 CGTTTTACTGGCCGACAGAAAAATCTGGTTATGACCGGTTTTCAGGGCGCGCAGCAGCGC 2457 || ||||||||||| || | |||||| | ||||| || |||| || | ||| Sbjct 116 CGAGCGGCTGGCCGACAGGAACACCTGGTTGTCGCCGGTCAGCACGGCGTCCATGAACGC 57 Query 2458 CTCGCGGGAAAAATAAAACGTCGCGCCAATCTGGCGGGATTTCAGGATATCGCGGA 2513 |||| || || || ||||| ||| | ||||||| ||||||||| | ||||| Sbjct 56 TTCGCCGGCGAAGTAGTACGTCAGGCCCACCTGGCGGCTTTTCAGGATGTTGCGGA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 100635753855972