Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_005340.1
Length=30636
Score E
Sequences producing significant alignments: (Bits) Value
seq3088488 390 2e-104
seq3088503 347 2e-91
seq3063309 147 4e-31
seq2959876 104 4e-18
seq3084702 98.7 2e-16
>seq3088488
Length=17142
Score = 390 bits (432), Expect = 2e-104
Identities = 1150/1755 (66%), Gaps = 93/1755 (5%)
Strand=Plus/Minus
Query 14896 GATTTTCACCACGGCACGCAGGTCATCGAAATTAATGACGGTACGCGTGTTATTTCCACA 14955
|||| || ||||||| || |||||||||| | || ||||| || || ||| |||
Sbjct 16622 GATTATCTCCACGGCGTGCGGGTCATCGAACTCAACGACGGCACCCGCCCCATTCGCACT 16563
Query 14956 GTAGCGACTGCGGTCGTCGGCATGGTTTGTACAGCCAGCGATGCAGATGCCACGCTATTT 15015
| | || || ||| ||||||||||||| || || ||||| || |||| | |||
Sbjct 16562 ATTCCCACCGCAGTCATCGGCATGGTTTGCACCGCTGAAGATGCGGAC-CCACTCGTTTT 16504
Query 15016 CCC-CTCAATGAACCGGTACTGATTACCAATGTGCAAAGCGCCATTGCGAAAGCCGGTAA 15074
||| || | || || || || ||||| ||||||| |||| | | || |||||
Sbjct 16503 CCCTCTGGACACTCCAGTCCTCATCACCAACGTGCAAACCGCCGTCGGCAAGGCCGGCGT 16444
Query 15075 AAAAGGCACGCTGGCTGCATCACTGCAGGCCATCGCAGACCAGTCAAAACCCGTCACTGT 15134
|| ||||| |||||||| ||||| | |||||| |||||| | || || | | |
Sbjct 16443 CAAGGGCACCCTGGCTGCCAGCCTGCAAGGCATCGCCGACCAGACCAAGCCTTACGTTAT 16384
Query 15135 TGTTGTACGTGTTGAGGATGGAACCGGCGATGACGAGGAAGCTGCGCTCGCACAGACTGT 15194
|| ||||| || | || || | | ||| | ||| || || || ||| | || ||
Sbjct 16383 CGTGGTACGGGTCAAAGAAGGCGCTGACGAAG-CGACGA--CTACGAGCGCCCTGATTG- 16328
Query 15195 TTCCAACATTATCGGAGGTACGGATGAGAACGGTAAATACACCGGTATCAAGGCTCTCCT 15254
| ||||| | |||| |||||||||| || || ||||| ||
Sbjct 16327 --------------GCGGTACAACACCAACCGGTCAATACACCGGCATGAAAGCTCTGCT 16282
Query 15255 GACTGC----TCAGGCCGTCACCGGCGTCAAGCCGCGTATTCTTGGGGTGCCGGGGCTGG 15310
| || ||| || || ||| | | |||||||| ||||| ||||| || || |
Sbjct 16281 CGCAGCCAAATCACGC-GTG---GGCATGACTCCGCGTATCCTTGGCGTGCCAGGCCTCG 16226
Query 15311 ATACTAAAGAGGTCGCGGTCGCGCTTG-CGTCGGCTGCCATTAAGTTACGTGCATTTGCT 15369
| | | || || ||| || | || | | |||| | | || || |||||
Sbjct 16225 ACAGTTTGCCAGTAGCCACCGCCCTCGGCGCCATC-GCCAAAGACCTGCGCGCCTTTGCA 16167
Query 15370 TACGTCAGCGCGTGGGGATGTAAGACTATTTCCGAAGCGATGGAATATCGTAAAAATTTC 15429
||||| ||||| ||| || || || | || | ||| || || | || |||
Sbjct 16166 TACGTAAGCGCCTGGAACTGCAAAACCAAGGAAGAGGTAGTGGCGTACCGCGAGAACTTC 16107
Query 15430 AGCCAGCGCGAGCTGATGGTTATCTGGCCTGATTTCCTCGCGTGGGACACCGTCAAAAAT 15489
| ||||| ||||||| || ||||| || ||||| |||||||| |||| ||
Sbjct 16106 GGTGCCCGCGAAATGATGGTGATTTGGCCGGACTTCCTGAACTGGGACACTGTCACCAAC 16047
Query 15490 ACCACCGCAACGGCTTACGCCACTGCGCGTGCACTCGGCCTGCGTGCTTACATCGACCAG 15549
| ||||| | |||| ||| || || || |||||||| || || | ||||||||
Sbjct 16046 AAGACCGCCAGCGCTTCGGCCGTGGCCCGCGCCCTCGGCCTTCGCGCCAAGATCGACCA- 15988
Query 15550 ACTGTCGGCT-GGCACAAAACCCTGTCTAACGTTGGTGTACAGGGCGTTACCGGCATCAG 15608
| | ||| | |||| ||||||||||| ||||| | || ||||| ||||| |||||
Sbjct 15987 AGAGACGGGTTGGCATAAAACCCTGTCCAACGTGGCCGTGAGTGGCGTGACCGGTATCAG 15928
Query 15609 CGCCTCAGTGTTCTGGGATTTGCAGGCATCCGGCACCGATGCTGACCTGCTCAACGAGGC 15668
|||| |||||||||||| |||| | | |||||| || || ||||||
Sbjct 15927 CGCCGACGTGTTCTGGGATCTGCAAAACCCAGCCACCGACGCCAACTACCTCAACAGCAA 15868
Query 15669 CGGGGTTACAACGCTGGT--ACGCAAGGACGGTTTCCGCTTCTGGGGTAACCGCACCTGC 15726
|| || || || ||| | |||| | ||||||| ||||||||||||| ||||||||||
Sbjct 15867 CGACGTCACCACCCTGATCAACGCCA--ACGGTTTTCGCTTCTGGGGTAGCCGCACCTGC 15810
Query 15727 TCGGATGACCCGCTTTTTCTGTTTGAGAACTACACTCGCACCGCGCAGGTACTGGCCGAC 15786
||||||||| | || || || |||||||| |||||||||||| | || || |||
Sbjct 15809 AGTGATGACCCGTTGTTCGCCTTCGAAAACTACACCCGCACCGCGCAGATCCTCGCGGAC 15750
Query 15787 ACGATGGCCGAGGCGCACATGTGGGCGGTCGACAAGCCCATTACCGCCACGCTCATTCGT 15846
|| |||| ||| |||||||||||||| || ||| || || |||| | || | ||
Sbjct 15749 ACCATGGGCGAAGCGCACATGTGGGCAGTTGACCGCCCTATGCACGCCTCCCTGGTACGC 15690
Query 15847 GACATTGTTGACGGCATTAACGCCAAATTCCGCGAGCTGAAATCAAACGGCTACATCGTG 15906
||| | || || ||| | | |||||| | |||||| ||||||| | |||||| | |
Sbjct 15689 GACCTGGTCGAAGGCGTAAGCGCCAAGATGCGCGAGTTGAAATCCCAGGGCTACCTGATC 15630
Query 15907 GAGGGTAAATGCTGGTTCGATGAGGA-ATCGAACGACAAGGAAACCCTCAAGGCCGGGAA 15965
| || | |||||| | || || ||| ||| ||| || |||||||||||||| ||
Sbjct 15629 GGCGGCAGTTGCTGGAACCCGGACGACATC-AACACCAAAGACACCCTCAAGGCCGGCAA 15571
Query 15966 ACTGTATATCGACTACGACTATACACCGGTTCCGCCACTGGAAAGCCTGACCCTGCGCCA 16025
|| | | || |||||||| || || || |||||||| ||| ||| ||| | |||||
Sbjct 15570 GCTCTGGCTTGATTACGACTACACCCCCGTGCCGCCACTTGAAGACCTCACCTTCCGCCA 15511
Query 16026 GCGTATCACCGATAAATATCTGGTGAATCTGGCCGAATCGGTCAACAGCTAA-------- 16077
||| |||||||| || ||| | | | ||| | ||| |||||||
Sbjct 15510 GCGAATCACCGACCGTTACCTGATCGACTTCGCCAAGGGCATCAGCAGCTAAACCGGGTC 15451
Query 16078 -----------GGAG-----CCTGA---------------AACA---ACATGGCACTACC 16103
|||| ||||| |||| ||||||| | ||
Sbjct 15450 TCCCCGCGAGGGGAGTTCACCCTGAACACGTATCCCGGAGAACACCGCCATGGCAATGCC 15391
Query 16104 CCGTAAACTCAAATACCTGAATATGTTCAATGACGGCCTCAGCTACATGGGTGTTGTTGA 16163
|| || |||||| |||| || |||||||||||||| |||||| | || ||| |||
Sbjct 15390 TCGCAAGCTCAAAAACCTCAACCTGTTCAATGACGGCAACAGCTATCTCGG-CTTGGTGA 15332
Query 16164 A-TCCGTGACGCTGCCGAAACTGACCCGCAAGCTCGAAAACTATCGCGGCGGCGGTATGA 16222
| ||| | || ||||| || ||||||| | ||| |||||||||||||| ||||
Sbjct 15331 AGTCCCTCACCCTGCCCTCCCTCGGCCGCAAGATGGAAGCGTATCGCGGCGGCGGCATGA 15272
Query 16223 ATGGCGCGG-CAGCGATTGACCTCGGCCTCGACGATGATGCGCTCACCGTCGAATGGTCT 16281
||||| ||| || | |||||| ||| | ||| || | || ||||||||
Sbjct 15271 ATGGCCCGGTCAAAG-CTGACCTGGGCATGTCCGACGACGGCATCCAGTTCGAATGGAAG 15213
Query 16282 GTCGGTGGCCTGCCTGATGTG-GCTCTGTGGGCGCAGTACGCCGCCCCGGGCGCTGATGC 16340
||||||||| ||| || |||| || | |||| || ||| |||
Sbjct 15212 ACCGGTGGCCT---CGATCTGATCTCTCTGCG-TCAGTTCGGCGCGGTCAACGCCTCCAG 15157
Query 16341 TGTGCCGCTGCGTTTTGCTGGTTCTTACCAGCGTGACGACACCGGCGAAATCGTGGCGGT 16400
|||| | ||||| || |||| ||||||||| |||||||| |||||| || ||
Sbjct 15156 TGTGGCCCTGCGATTCTCTGGCCCTTACCAGCAAGACGACACAGGCGAAGTCAGCAATGT 15097
Query 16401 CGAGGTGGTCATGCGTGGCCGTCATAAAGAAATCGACGGCGGCGAGAATAAGCAGGGTGA 16460
|| ||||| ||||||||||||| || ||||| ||||| ||| || ||
Sbjct 15096 GGAAGTGGTTGTGCGTGGCCGTCACGAAACCATCGAGATGGGCGATGCCCAGCCCGGCGA 15037
Query 16461 AAACACCTCGACCAAAC--TGTCGACTGTCTGCACCTACTACCGCCTCACGATTGATGGC 16518
|||| || || | || | || ||||| ||||||| || || | ||||||
Sbjct 15036 GGACAC--TGAACACTCCATGACCACCACCTGCAGCTACTACAAGCTGACCGTAGATGGC 14979
Query 16519 AGCGACGTCATCGAAATCGACACCGTCAACATGGTCGAGAAGGTGAACGGCGTCGACCGT 16578
|| ||||||| ||||| ||||| | ||||||||||| ||||| || |||
Sbjct 14978 GAAGAAATCATCGAGATCGATCTGCTCAACTTTGTCGAGAAGGTCAACGGTGTGGACATG 14919
Query 16579 CTGGAACAGCACCGC 16593
||||| ||||||||
Sbjct 14918 CTGGAGAAGCACCGC 14904
>seq3088503
Length=21467
Score = 347 bits (384), Expect = 2e-91
Identities = 1031/1557 (66%), Gaps = 45/1557 (3%)
Strand=Plus/Minus
Query 2011 AAGAGGTTCGTTTAACAGGGCGTGCATGGTCGCCCATGCGATATCGGCGTGACTGGCTTC 2070
||| ||||||||| || ||||| | |||||| || | ||||| || | || |
Sbjct 11492 AAGCGGTTCGTTTTGCAATGCGTGAAATAGCGCCCAGGCCAGGTCGGCATGGCCGGTGTT 11433
Query 2071 CTCGGTGCGGCTGGCCTCATAGGTAGCGCTG-CGCCCGC-TGCTGGTCATGGTTTTGCGG 2128
||| |||| | || ||||| | ||| || |||| ||| ||| | || ||||||
Sbjct 11432 GTCGTTGCGCCCTGCGGTGTAGGT-GTACTGGCGACCGCCTGC-GGTGACCGTCTTGCGG 11375
Query 2129 ATGGACATAAACGACTGCGTGACGTCGGTTGCCCCGGCGTCGTATTCCAGACAGCCGCGG 2188
|| | ||| | |||||||| | |||||| |||||||||| | ||||| | ||||
Sbjct 11374 ATCGCCATCATCGACTGCGCCATGTCGGTCCACCCGGCGTCGAACTCCAGCCGGCCGTTA 11315
Query 2189 CGAATGGTGTCTTTCGCCTTGAGCACCATTGCG-GTTTTCATTTCTGGCGTGTAACGGAT 2247
| || ||| | ||||| ||||||| ||| ||||| | ||| |||| || | ||
Sbjct 11314 TGGATCACGTCATAGGCCTTCAGCACCAG-GCGTGTTTTGACTTCGGGCGAATAGCTGAA 11256
Query 2248 ACCGCGAGCCGCCGGGTAGAATGAACGCACCAACTGGAATACACCGAGACCGAGGCCTGT 2307
| | |||||| |||| ||||||| ||| || ||| ||| || || ||
Sbjct 11255 GGTGGTCACAGCCGGGAAGAACTGGCGCACCAGCTGCGCCACGCCGCTACCCAGCCCGGT 11196
Query 2308 TGCGTCAATGCCGATGTATTCGACGTTGTATTTCTCAGTGAGCCTGCGGATGCCTTCTGC 2367
| ||||| ||||| || || ||| || || | ||| | | ||
Sbjct 11195 GACATCAATCCCGATATAGGTCACCCAGTAGCGGTCGCAGACGTTTTTGATAAATGCCGC 11136
Query 2368 CTGCGCGGCAAAGTCCATGCCTTTCCACTGGTGACGCTCCAGCATGCGAAACTTGCCACC 2427
||| || |||||||||||||| | ||||| |||||||| | ||| || ||||| ||
Sbjct 11135 CTGGGCCGCAAAGTCCATGCCCCGGAATTGGTGCCGCTCCAGGACGCGGAATTTGCCGCC 11076
Query 2428 CGAAACCACCGGCGGCGCGAGTACGACACATCCGGCACTGTCGCCGGTGTGGGACGGGTC 2487
|| |||| ||||||||| | || || |||| | || ||||| | | |||||
Sbjct 11075 CGGTACCAGCGGCGGCGCAACCACCACCAGCCCGGAGCAATCACCGGTTTCCGCTGGGTC 11016
Query 2488 GTAGCCAATCCAGACCGGGCGTGAGCCGAATGGATGGTCGGCGAACGGGGCGAAGTCCTC 2547
|||||| ||||| ||| | || ||||| || | |||||| || | |||||||
Sbjct 11015 GTAGCCGATCCATACCTGACGGTCACCGAACGGCCGCATGGCGAATGGCTTGTAGTCCTC 10956
Query 2548 ---CCATGTTTCCATC--AC-GTCGACCATGCAGCGCTGCAGCTCCTCGAACGGGAATAC 2601
|||| || | | || |||||||||||||| ||||||| | | ||||| || |
Sbjct 10955 TGCCCAT---TCAACCCAACTGTCGACCATGCAGCTCTGCAGCAACGCCAACGGAAAGAT 10899
Query 2602 AGATGCCTT-ATCGTCGACAAACTCGCACATAAACAGGTTTTTAAAGTCCTCATCACTGT 2660
| || || |||||| |||||||| ||||| |||||||| || ||||| ||||
Sbjct 10898 -GCTGGCTCCATCGTCAACAAACTCACACATCAACAGGTTGGCGAACGCCTCAGGGCTGT 10840
Query 2661 TTTCGCGTCTGAGCTGGTCGAGGTCGAACAGGGTGCAGCCACCGGCAAGGGCGTCCTCAA 2720
|| || | | || || | ||||||||| ||||| ||| |||||| |
Sbjct 10839 ACTCCCGACGCAACTCCTCAATGTCGAACAGATCACAGCCGCCGTGCTCTGCGTCCAGGA 10780
Query 2721 TAGTGACAATCTGCCGCCACTGTCCGTCAGCGCAAAGAAGCCCACCGGC--GAGCGCGCT 2778
| ||||| |||||||||||| | ||| |||| ||| | | || | |||||| |
Sbjct 10779 TGGTGACGATCTGCCGCCACAACCGGTCCTCGCA--GAACCGCCCCTGTTGGAGCGCCCC 10722
Query 2779 GTGACTGATGTCGATTTCGATGCGGTCAGCAGCACTGGCGCGCCCCTTGTTGAACAGCTC 2838
||| | ||||| | | || | | || || |||| ||| |||||||| ||||
Sbjct 10721 GTGGGAAACGTCGACCTTGGTGTGTTGCGCCGC--TGGCTTACCC-TTGTTGAAGCGCTC 10665
Query 2839 GCCAGACCAGAAGGGATAAGCGCCGTGCGCCAGCGTGGAAGGTGTCGAAAAGTAAGTTGA 2898
||| | |||||||| || || | || |||| |||| || ||||| ||||| |||
Sbjct 10664 GCCGGTCCAGAAGGTGTAGGCCTCATGGGCCATGCTGGACGGCGTCGAGAAGTAGGTTTT 10605
Query 2899 GCGCAGATGCTTTTGCGAGGCCATGCCCGAGGCGACTTTGCGCAGCTTCTGAAAATTCGG 2958
|||| | ||| ||| |||||||||||| ||||| ||| ||| | || ||| ||
Sbjct 10604 GCGCCACTTCTTGTGCATGGCCATGCCCGAAGCGACCTTGTTCAGTTCCTCAAACTTGAA 10545
Query 2959 GATCCAGAATATTTCATCGACATACAGGTCGCCGTTATGGCTCTGCGCGGTGTTGGAATT 3018
||||||| | ||| |||| || | | ||||| | || ||| ||||| | |||
Sbjct 10544 CGTCCAGAAGAATTCGTCGAAGTAGAAATTGCCGTGGTAGCCCTGGGCGGTACGCGCATT 10485
Query 3019 GGTGCCGAGAAAAATCAGCTTTGCGCCGTTGTTGCCGATGACAATCGGGTCGCCAGTCAG 3078
||| ||||| |||| ||||| ||||||||| | | || || || || || || |||||
Sbjct 10484 GGTACCGAGGAAAAACAGCTCGGCGCCGTTG--GGCAAT-ACGATGGGATCCCCCGTCAG 10428
Query 3079 GTCGA---CGTCAACCAGTCGCGCAAACTGGAT-GATGTATTCCCGGAACACGTAAGCCT 3134
|||| || |||| || ||||| || | |||||| | || |||| || || |
Sbjct 10427 CTCGACACCGATAACCTCACGGGCAAA-TGCCTGGATGTACCCGCGAAACAGATAGGCTT 10369
Query 3135 GCGTTTTACTGGCCGACAGAAAAATCTGGTTATGGCCGGTCTTGAGCGCGCGCAGCAGTG 3194
| |||| || ||||| || ||||| || | ||||| | ||||| || | |
Sbjct 10368 GGTTTTTCGATGCGGACAGGAAGATCTGATTGCGCCCGGTTTCCAGCGCATCAAGAAACG 10309
Query 3195 CCTCGCGGGAAAAGTAGAACGTCGCGCCAATCTGGCGGGATTTGAGAATATCGCGAATAC 3254
||||||||| |||||| | |||||||| ||||| ||| |||||| || ||||| | |
Sbjct 10308 CCTCGCGGGCAAAGTAATAGGTCGCGCCGATCTGCCGGCTTTTGAGGATGACGCGAGTCC 10249
Query 3255 GGTGCGCCAGT-CCTGCCCGGTACCACTGCAACTGGTATTCGAAAGACTGGTCGAAGAAA 3313
| || | | || ||||||||||| | |||||| |||||| | ||||| ||
Sbjct 10248 GTTG----ATTGCCAGCCCGGTACCAGTCTTTCTGGTAGTCGAAACAGCCGTCGATAAAC 10193
Query 3314 ATTTCTTCCAGCTTTGCGACAGCCTCATCGCTGAAAAAGTTCTTTTTCGGCCTCTTAC-G 3372
||| || | ||| ||| ||||||| | ||| |||| || || || |
Sbjct 10192 GCTTCACGCAACAGCTCGATCTGCTCTTCGCTGATATCGTT-TTTTGGGGTCTTTTTCTT 10134
Query 3373 CTCCCCCTTGTTACGGTTGGCAACGTTGGGGTTAAGGTCGGCCTCGTTGCCGGTCTGGCT 3432
| |||| ||| || || || | ||| ||||| || |||| ||| | || | | ||
Sbjct 10133 CGGACCCTCGTTGCGTTTAGCCAGGTTAGGGTTGAGCTCGGTTTCGGTACC-GCCGCCCT 10075
Query 3433 G-TAGCGGTTGACGCGCGCCAGTCGCTCAATCTGCCGCCCGAGCAGGTCAATCTCTTTGA 3491
| |||| | | | ||| | || || | || || ||||| ||||| || ||||
Sbjct 10074 GAAAGCGCTGAATTCTGGCCTGGCGTTCCAATTGGCGGTGCAGCAGATCAATTTCCTTGA 10015
Query 3492 AGTCGCCGCCTGACTTTTGC--GGCTTGGCGATGAGCTGAATCAGGCGCGCCTCAAG 3546
|||| ||||| || |||| |||| ||| ||||| | || ||||| || ||
Sbjct 10014 AGTCCCCGCC--GCTCTTGCTTTCCTTGAGGATCAGCTGCACCAACCGCGCTTCCAG 9960
Score = 118 bits (130), Expect = 2e-22
Identities = 199/288 (69%), Gaps = 0/288 (0%)
Strand=Plus/Minus
Query 5504 TATCAGGATGACCCGAACCTCGTCGCCATTGTTGGTCGTAAGCTGCTGGCTGACAAATAT 5563
|| ||||| ||||| | || || | || ||||| | |||||||| ||||| |||
Sbjct 8099 TACCAGGAAGACCCTGATCTGGTGGTGATCTGCGGTCGCCAACTGCTGGCCGACAAGTAT 8040
Query 5564 TTTCCTCTGGTGAACAAACAGCAGGAGAACAGCGAGTCGCTCGCGGCAGATATCATCATC 5623
|| || | | |||||| | | | | | || ||| || || |||||| ||| |
Sbjct 8039 TTCCCGATCATCAACAAAGACAACGCGCCGACTGAAATGCTGGCCGCCGATATCGTCACC 7980
Query 5624 AGCCAGAAGCGCATCGGCAACCTGCCTGCTGTGCGCGTGCCGTACTTCCCGGCGAATGCC 5683
|| || |||||| | ||||| |||| || ||||||||||| ||||||||| || |
Sbjct 7979 AGTCAAAAGCGCTTGGGCAATTTGCCAGCCGTGCGCGTGCCTTACTTCCCGCCGCGCGGG 7920
Query 5684 GTACTGGTAACCACTCTGGAAAACCTCTCTATCTATTTTATGGATGAGAGCCACCGCCGA 5743
| ||||| |||| ||||||||||| || ||||| | ||| | |||| ||||||
Sbjct 7919 TTGCTGGTCACCAAGCTGGAAAACCTGTCGATCTACTGGCAGGAAGGCAGCCGCCGCCGC 7860
Query 5744 AGCATTGATGAGAACCCGAAAAAAGACCGCGTGGAAAACTACGAGTCG 5791
| | | | || || | || |||||| | |||||||||||||||
Sbjct 7859 ACCGTCGTCGACAATGCCAAGCGTGACCGCATCGAAAACTACGAGTCG 7812
Score = 86.0 bits (94), Expect = 1e-12
Identities = 193/290 (67%), Gaps = 0/290 (0%)
Strand=Plus/Minus
Query 433 AAGTCATCCTTTGTGGCGACCTCGCTCAGTGGCACGATTTTTATGCCGTCCGGTTTCCCG 492
|| |||||||| | || ||||| || | || | | | ||| |||||| || |||
Sbjct 12324 AATTCATCCTTGGCCGCCACCTCACTGACCGGGATCAGCTGTATCCCGTCCTTCTTGCCG 12265
Query 493 TTCGGTGAGTAGAAAAACAGGTTTTTAAAGTTGCCGAGCCCTTTAGAATTACGCATTGCA 552
| || || || | ||||| ||| ||| ||||| |||| || || | | ||
Sbjct 12264 GTGGGCGAATACACAAACAAGTTGCGAAAATTGCCTGGCCCCTTGGAGTCCTTGAGAGCC 12205
Query 553 TCGCGCAGCGATTCGACGTCAGTCGCGCTTTGCGCCGGGTCAGTCACATACATGATGTAA 612
| ||||| | |||| || || | | || || | || |||| || | ||| |
Sbjct 12204 TTGCGCAAAGCGTCGATATCGGTTTCAGTCTGTGCGGCATCGGTCATGTAGAGAATGAAG 12145
Query 613 CCTGCGTGCGCGCCGTTCTGGTAATACTTGCGGCGGAACAGCGTCGCGGATTCATTCAGC 672
|| ||||| ||| |||| ||| |||||||||||||||| ||| || ||||| || |||
Sbjct 12144 CCGGCGTGACTGCCATTCTCGTAGTACTTGCGGCGGAACAACGTGGCCGATTCGTTGAGC 12085
Query 673 CACGCAGAATTAAGCGCGCTGAGATATTCAGGCAGGCCGTAAATCTCCTG 722
|||| || | | || || | | || |||| ||| |||||||||||
Sbjct 12084 AACGCCGACTGCAAGGCACTAATCCACTCCGGCAAGCCATAAATCTCCTG 12035
>seq3063309
Length=1409
Score = 147 bits (162), Expect = 4e-31
Identities = 808/1266 (64%), Gaps = 65/1266 (5%)
Strand=Plus/Minus
Query 2012 AGAGGTTCGTTTAACAGGGCGTGCATGGTCGCCCATGCGATATCGGCGTGACTGGCTTCC 2071
|| ||||| || ||||||||||||||| ||| ||| ||||| |||||||| | || |
Sbjct 1231 AGGGGTTCATTGAACAGGGCGTGCATGATCGACCAGGCGATGTCGGCGTGGCCGGTGGCG 1172
Query 2072 TCGGTGCGGCTGGCCTCATAGGTAGCGCTGCGCCCGCTGCTGGTCATGGTTTTGCG---G 2128
|| ||||| || ||||| | ||| |||||| |||| ||| ||| |
Sbjct 1171 TCAGTGCGCGAAGCGCTGTAGGTGAC-CTGG--CCGCTGGTGGT---GGTGCCGCGCTTG 1118
Query 2129 ATGGACATAAACGACTGCGTGACGTCGGTTGCCCCGGCGTCGTATTCCAGACAGCCGCGG 2188
|||| || |||| ||| | || |||||| |||||||| |||| | | || |
Sbjct 1117 ATGGTCAGGAACGCCTGTGCGATGTCGGTCCAACCGGCGTCCCATTCGATGCGGCTCCCC 1058
Query 2189 CGAATGGTGTCTTTCGCCTTGAGCACCATTGCGGTTTTCATTTCTGGCGTGTAACGGATA 2248
| || ||||| | || ||||| |||| || | |||| | || | ||||| ||||
Sbjct 1057 TGGATCGTGTCCTGGGCTTTGAGTACCAGTGTGTTTTTGGTCTCGAGGCTGTAATGGAT- 999
Query 2249 CCGCGAGCCGC---CGGGTAGAATGAACGCACCAACTGGAATACACCGAGACCGAGGCCT 2305
||| | ||| ||||||||| ||||||| | || |||||| |||| ||
Sbjct 998 -CGCT-GTCGCACGCGGGTAGAAGTCGCGCACCAGGTCAAACACACCGTAGCCGATACCG 941
Query 2306 GTTGCGTCAATGCCGATGTATTCGACGTTGTATTTCTCAGTGAG---CCTG--CGGAT-- 2358
|||| || |||||||||| | |||||| | ||| || || | || | | |
Sbjct 940 GTTGTATCGATGCCGATGTGCTGCACGTTGAAACGCTCGGTAAGTTTCTTGACCTGGTCG 881
Query 2359 GCCTTCTGCCTGCGCGGCAAAGTCCATGCCTTTCCACTGGTGACGCTCCAGCATGCGAAA 2418
|||| | | || || | | ||| ||| |||| || ||||| ||||| ||
Sbjct 880 GCCTGGTACTTGAACGACT--GCCCACGCCA----ACTG-TGTTTTTCCAGGATGCGGAA 828
Query 2419 CTTGCCACCCGAAACCACCGGCGGCGCGAGTACGACACATCCGGCACTGTCGCCGGTGTG 2478
|| | || | ||| ||||| |||| || || || ||| ||||| |||| |
Sbjct 827 TTTCGCTCCGGGTTCCAGTGGCGGAGCGACCACCACGCACGTGGCGTCGTCGCGGGTGCG 768
Query 2479 GGACGGGTCGTAGCCAATCCAGACCGGGCGTGAGCCGAATGGATGGTCGGCGAACGGGGC 2538
| ||| |||||||||| ||| ||||||| |||||| || | || |||
Sbjct 767 GCTCGGATCGTAGCCAAGCCACACCGGGCTGTTGCCGAAAGGTCGATCCAGTTCAGGGTT 708
Query 2539 GAAGTCCTCCCATGTTTCCATCACGTCGACCATGCAGCGCTGCAGCTCCTCGAACGGGAA 2598
| |||||||||| | || |||| || |||| ||| || | || |||
Sbjct 707 GTAGTCCTCCCACAA---CGACAGGTCGGAGTAACACCGCTCCAGGTCTTTGAGGCCGAA 651
Query 2599 TACAGA-TGCCTTATCGTCGACAAACTCGCACATAAACAGGTTTTTAAAGTCCTCATCAC 2657
| || || | ||||| |||| ||| ||||| | | || | || ||
Sbjct 650 GGCGCTCTGGCTGCT-GTCGATGAACTTGCAGTAGAACAGCTGCTGGAATTTGTCTTCGT 592
Query 2658 TGTTTTCGCGTCTG-AGCTGGTCGAGGTCGAACAGGGTGCAGCCACCGGCAAGGGCGTCC 2716
|| || | ||| || || |||||||||||||| |||||| ||||| | ||||||
Sbjct 591 CGTACTCCAG-CTGCAGTTGCTCGAGGTCGAACAGATCGCAGCCGCCGGCTATGGCGTCG 533
Query 2717 TCAATAGTGACAATCTGCCGCCACTGTCCGTCAGCGCAAAGAAGCCCACCGGCGAGCGCG 2776
|| | |||| | | ||||| || ||||| | ||| | | || | | ||
Sbjct 532 TCCAGGGTGATGGTTTTGCGCCATTGGCCGTCGGGGCACA-ATGCGCCCTGG-------- 482
Query 2777 CTGTGACTGATG--TCGATTTC---GATGCGGTCAGCAGCACTGGCGCGCCCCTTGTTG- 2830
||| ||| | ||| | | ||| | | || || ||||| |||||
Sbjct 481 --GTGTATGACGCCTCGGTGGGCCAGGTGCCGCCGGCCTTCTTGCCGCGCTTGCTGTTGC 424
Query 2831 --AACAGCTCGCCAGACCAGAAGGGATAAGCGCCGTGCGCCAGCGTGGAAGGTGTCGAAA 2888
|| |||||| |||||||| || || || ||||| | | | || |||||||
Sbjct 423 GGAATTCCTCGCCCGACCAGAACGGGTACGCTTGGTGCGAGACTGCGCTGGGCGTCGAAA 364
Query 2889 AGTAAGTTGAGCGCAGATGCTTTTGCGAGGCCATGCCCGAGGCGACTTTGCGCAGCTTCT 2948
|||| ||| |||| | ||| || | | ||||| | ||| || ||| || || |
Sbjct 363 AGTAGGTTTTGCGCCACTTCTTGTGGGTGCCCATGGCACTGGCCACGGTGCTGAGTTTGT 304
Query 2949 GAAAATTCGGGATCCAGAATATTTCATCGACATACAGGTCGCCGTTATGGCTCTGCGCGG 3008
|| | | ||||| || |||||||| || | || ||| | | || ||| ||||
Sbjct 303 CGAAGTCACGTATCCAAAAATACTCATCGACGTAGACGTGGCCATGGTAGCCCTGGGCGG 244
Query 3009 TGTTGGAATTGGT-GCCGAGAAAAATCAGCTTTGCGCCGTTGTTGCCGATGACAATCGGG 3067
|| || |||||| | | ||||| ||||| ||||||||| || ||| |||||
Sbjct 243 TGCTGCTATTGGTCGACAAGAAACG-CAGCTCGGCGCCGTTGCTGAGCGTGA---TCGGG 188
Query 3068 TCGCCAGTCAGGTCGACGTC-AACCAGTCGC---GCAAACTGGATGATGTATTCCCGGAA 3123
| ||| ||||| |||| ||| ||||| | || ||||||||||||||||| |||||
Sbjct 187 TTGCCGGTCAGCTCGATGTCGAACCACT-GCTTTGCAAACTGGATGATGTAACTGCGGAA 129
Query 3124 CACGTAAGCCTGCGTTTTACTGGCCGACAGAAAAATCTGGTTATGGCCGGTCTTGAGCGC 3183
| | | ||||| ||||||||||| || | |||||| | ||||||| | ||
Sbjct 128 AATTTCCGACTGCGAGCGGCTGGCCGACAGGAACACCTGGTTGTCGCCGGTCAGCACGGC 69
Query 3184 GCGCAGCAGTGCCTCGCGGGAAAAGTAGAACGTCGCGCCAATCTGGCGGGATTTGAGAAT 3243
| || | || |||| || |||||| ||||| ||| | ||||||| ||| || ||
Sbjct 68 GTCCATGAACGCTTCGCCGGCGAAGTAGTACGTCAGGCCCACCTGGCGGCTTTTCAGGAT 9
Query 3244 ATCGCG 3249
| |||
Sbjct 8 GTTGCG 3
>seq2959876
Length=477
Score = 104 bits (114), Expect = 4e-18
Identities = 222/332 (67%), Gaps = 10/332 (3%)
Strand=Plus/Minus
Query 11733 AACCCTGACACCTGTCCGGAAAATTTGCTGCCGTGGCTGGCGTGGGCGTTTTCTGTCGAC 11792
||| |||| ||||| |||| | ||||||||||| ||||| ||||| | || || ||
Sbjct 330 AACGCTGATACCTGCCCGGTACATTTGCTGCCGCATCTGGCATGGGCATGGTCGGTGGAT 271
Query 11793 CGGTGGGATGAGAACTGGCCGGAGGGAACAAAACGTGCCGTTATCCGTGATGCATATTTC 11852
|| |||||| | ||| | |||| || ||||| |||| ||| | | |||| |
Sbjct 270 CGCTGGGATTACCGATGGACCGAGGCGACCAAACGCGCCGCCATCAAGGCCTCTTATTAC 211
Query 11853 ATTCACTGCCACAAGGGGACTATCGGCGCAATCCGTCGGGTAGTGGAGCCTCTCGGCTAT 11912
|| || ||||||||| || |||||||| | || || || || |||||||| |||||
Sbjct 210 ATACATGCCCACAAGGGCACCATCGGCGCGTTACGCCGTGTGGTAGAGCCTCTGGGCTAC 151
Query 11913 GTCATCAATGTAACGGAATGGT--------GGGAAAGCAGCGACCCGCCCGGCACATTCC 11964
| ||| | | | || |||| || | || |||| || ||||| ||
Sbjct 150 CTGATCGAGATTATCGAGTGGTTCAACATGAGGCCCGAAGGGACC--CCAGGCACCTTTG 93
Query 11965 GGCTTGATATCGGGGTGCTTGAAAGTGGCATTACCGAGGAAATGTATTTCGAAATGGAAC 12024
| | | |||||||| | || | || || || |||||||||||| || |||| |
Sbjct 92 CGTTAAAGGTCGGGGTGTTGGACACCGGTATCACTGAGGAAATGTATCAGGAGCTGGAGC 33
Query 12025 GACTGATTGCGGATGCAAAACCAGCCAGTCGT 12056
| ||||||| || || || || | ||| |||
Sbjct 32 GGCTGATTGATGACGCCAAGCCCGTCAGCCGT 1
>seq3084702
Length=3045
Score = 98.7 bits (108), Expect = 2e-16
Identities = 129/179 (72%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 11733 AACCCTGACACCTGTCCGGAAAATTTGCTGCCGTGGCTGGCGTGGGCGTTTTCTGTCGAC 11792
||| |||| ||||| |||| ||||||||||| ||||| ||||| | || || ||
Sbjct 2898 AACGCTGATACCTGCCCGGTGCATTTGCTGCCGCATCTGGCCTGGGCTTGGTCGGTGGAT 2839
Query 11793 CGGTGGGATGAGAACTGGCCGGAGGGAACAAAACGTGCCGTTATCCGTGATGCATATTTC 11852
|| |||||| | ||| | |||| || || ||||||| ||| | | |||| |
Sbjct 2838 CGCTGGGATTACCGATGGACAGAGGCGACCAAGCGTGCCGCCATCAAGGCCTCTTATTAC 2779
Query 11853 ATTCACTGCCACAAGGGGACTATCGGCGCAATCCGTCGGGTAGTGGAGCCTCTCGGCTA 11911
|| || ||||||||| ||||||||||| | ||||| || || |||||||| |||||
Sbjct 2778 ATCCATGCCCACAAGGGAACTATCGGCGCCTTGCGTCGTGTGGTTGAGCCTCTGGGCTA 2720
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 94322514136036
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |