Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09] 3,088,511 sequences; 2,785,377,831 total letters Query= NC_005344.1 Length=39043 Score E Sequences producing significant alignments: (Bits) Value seq268701 80.6 6e-11 >seq268701 Length=8118 Score = 80.6 bits (88), Expect = 6e-11 Identities = 92/124 (74%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 21658 GCAATTTGCCTTCAAGATAAACCTCAGAGCCTTTTCGCAGATATTCGCTGGCAATTTCTG 21717 ||| ||||||||||| ||||||| || ||||| ||||| ||||| | ||| ||||||| Sbjct 7993 GCAGTTTGCCTTCAATGTAAACCTGCGAACCTTTGCGCAGGTATTCACCGGCGATTTCTG 8052 Query 21718 CCAGTTTCCCGCTCATTACCACGCGGTGCCACTCCGTCTGCTCCTTTTGCTCTCCAGTTT 21777 ||| || ||| ||| ||| |||||||| || || | ||| | || ||||| | Sbjct 8053 CCACCTTGCCGAACATCGACACACGGTGCCATTCGGTTTTCTCGACCTTCTGGCCAGTCT 8112 Query 21778 GCTT 21781 |||| Sbjct 8113 GCTT 8116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 120238239880910