Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09] 3,088,511 sequences; 2,785,377,831 total letters Query= NC_005856.1 Length=94800 Score E Sequences producing significant alignments: (Bits) Value seq3047186 224 6e-54 seq3023355 223 2e-53 seq366846 219 2e-52 seq2815396 152 3e-32 seq326935 138 7e-28 seq3087968 134 8e-27 seq2453999 118 6e-22 seq108461 118 6e-22 seq254255 113 3e-20 seq3016640 111 9e-20 seq3085141 100 2e-16 seq268701 95.1 7e-15 seq2262318 91.5 9e-14 seq2951953 89.7 3e-13 seq2799564 84.2 1e-11 >seq3047186 Length=1103 Score = 224 bits (248), Expect = 6e-54 Identities = 486/723 (67%), Gaps = 12/723 (2%) Strand=Plus/Plus Query 71865 ACGGGATTTACCGATCTCAATAAGAAGACGGCAGGGCTTCAGCCGTCCGATCTCATCATT 71924 || || | |||||| ||| || ||||||| || || ||||||||||| || ||||| Sbjct 230 ACCGGCTATACCGACCTCGATGAGAAGACCAGCGGCCTGCAGCCGTCCGACCTGATCATC 289 Query 71925 GTCGCCGCCCGCCCATCTATGGGGAAGACCACGTTTGCGATGAATCTCGTCGAAAATGCC 71984 ||||||| ||| || || ||||| |||||||| || || ||||| || || || || ||| Sbjct 290 GTCGCCGGCCGTCCTTCGATGGGTAAGACCACCTTCGCCATGAACCTGGTGGAGAACGCC 349 Query 71985 GCAGTTCGTAACGATAAGCCCGTATTGGTTTTTAGCCTTGAGATGCCGAGCCACCAGCTG 72044 | | | || | ||| ||| | || |||| | ||| |||||||| | | |||| Sbjct 350 GTACTGCGCAGCGACAAGGCGGTGCTGGTGTACTCCCTCGAGATGCCAGGTGAATCGCTG 409 Query 72045 ATGATGCGCTCACTGGCTTCTCTTGCACGCGTTGATCAGACTCGTATTCGGACAGGGCAA 72104 || ||||| || | || || | || | || ||||| | || | || ||| Sbjct 410 ATCATGCGTATGCTCTCGTCCCTGGGTCGTATCGACCAGACCAAGGTGCGTTCCGGCCAA 469 Query 72105 CTTAACGACGAGGATTGGGCGCGGGTTTCTGGCGCAATGGGTATTCTGTTGGACAAGCAG 72164 | | ||||| || ||| | || | | || || | ||| | || | | Sbjct 470 TTGGAGGACGACGACTGGCCACGCCTGACCTCGGC---GGTCAACCTGCTTAACGACCGC 526 Query 72165 AATATTTTTATTGATGACTCAAGCGCCCTGACGCCGACAGAGCTACGTTCCCGCGCTCGT 72224 || | || || |||||| | || | | || ||||| | ||| | || | || Sbjct 527 AAGCTGTTCATCGATGACACCGCCGGTATCAGCCCTTCAGAGATGCGTGCGCGTACCCGC 586 Query 72225 CGTGTTTATAAAGAAAATGGTGGTTTGAGCATGATTATGATCGACTACCTGCAACTTATG 72284 || | ||| | || | | | |||| ||||||||||||||||| | ||| Sbjct 587 CGCCTGGTGCGTGAACACGGCGACATCGCCCTGATCATGATCGACTACCTGCAGTTGATG 646 Query 72285 CGCGTCCCCG-----AGCTGCAAGATAACCGAACGCTGGAAATTGCCGAGATTTCTCGCT 72339 | |||| | ||| || || ||||| || || ||| |||| || || || | Sbjct 647 CAGATCCCGGGTTCCAGCGGC--GACAACCGCACCAACGAGATTTCCGAAATCTCCCGTT 704 Query 72340 CACTGAAGGCGTTGGCGAAGGAATTACAAGTACC-GGTGGTGGCATTGTCACAACTTAAT 72398 | ||||| || |||| |||||||| ||| | || ||||||||| |||| || || || Sbjct 705 CCCTGAAAGCCCTGGCCAAGGAATT-CAACTGCCCGGTGGTGGCGCTGTCCCAGCTCAAC 763 Query 72399 CGATCGCTTGAACAGCGTGCGGACAAACGACCGGTAAATTCAGATTTACGTGAATCAGGA 72458 || || || ||||| || | |||| || ||||| || || || || |||||||| ||| Sbjct 764 CGCTCCCTGGAACAACGCCCCAACAAGCGCCCGGTGAACTCCGACTTGCGTGAATCCGGA 823 Query 72459 GCAATTGAGCAGGACGCAGACCTGATTATGTTTCTGTATCGCGACGAAGTTTATCACCCG 72518 || || ||||||||||| ||| |||| ||||| |||| |||||||| || |||||||| Sbjct 824 GCGATCGAGCAGGACGCCGACGTGATCATGTTCGTGTACCGCGACGAGGTGTATCACCCC 883 Query 72519 GATAGCGAAATGAAGGGCATTGCCGAGGTAATTATCGGAAAGCAACGAAATGGCCCAATT 72578 || | ||| ||||||||||||||| | || ||||| ||||| || || || || || Sbjct 884 GAAACGGAACACAAGGGCATTGCCGAGATCATCATCGGCAAGCAGCGGAACGGGCCTATC 943 Query 72579 GGC 72581 ||| Sbjct 944 GGC 946 >seq3023355 Length=832 Score = 223 bits (246), Expect = 2e-53 Identities = 487/722 (67%), Gaps = 28/722 (4%) Strand=Plus/Plus Query 71874 ACCGATCTCAATAAGAAGACGGCAGGGCTTCAGCCGTCCGATCTCATCATTGTCGCCGCC 71933 ||||| ||| | |||| || || || ||||||||||| | ||||| ||||||| | Sbjct 119 ACCGACCTCGACGAGAAAACCAGCGGCCTGCAGCCGTCCGACTTGATCATCGTCGCCGGC 178 Query 71934 CGCCCATCTATGGGGAAGACCACGTTTGCGATGAATCTCGTCGAAAATGCCGCAGTTCGT 71993 || ||||| ||||| || ||||| ||||||||||| || || ||||| |||| | || Sbjct 179 CGTCCATCCATGGGTAAAACCACCTTTGCGATGAACCTGGTGGAAAACGCCGTGTTGCGC 238 Query 71994 AACGATAAGCCCGTATTGGTTTTTAGCCTTGAGATGCCGAGCCACCAGCTGATGATGCGC 72053 | ||| ||| ||||| |||||| || |||||||| || | |||||| ||||| Sbjct 239 AGCGACAAGGCCGTACTGGTTTACTCGCTGGAGATGCCAGGCGAATCGCTGATTATGCGT 298 Query 72054 TCACTGGCTTCTCTTGCACGCGTTGATCAGACTCGTATTCGGACAGGGCAACTTAACGAC 72113 ||| | || || | || | || ||||| | || | || | || | ||| Sbjct 299 ATGCTGTCGTCGCTCGGCCGTATCGACCAGACCAAGGTGCGCGCCGGCCGTCTGGAAGAC 358 Query 72114 GAGGATTGGGCGCGGGTTTCTGGCGCAATGGGT-ATTCTGTTGGACAAGCAGAATATTTT 72172 || |||||| |||| |||| || ||| | ||| | | | | || | || Sbjct 359 GACGATTGGCCGCG----TCTGACGTCGGCGGTCAACCTGCTCAATGACCGTAAGTTGTT 414 Query 72173 TATTGATGACTCAAGCGCCCTGACGCCGACAGAGCT------ACGTTCCCGC--GCTCGT 72224 ||| |||||| | || | | ||| | ||| | |||| ||||| ||| || Sbjct 415 TATCGATGACACCGCCGGTATCAGCCCGTCGGAGATGCGCGCACGTACCCGCCGGCTGGT 474 Query 72225 CGTGTTTATAAAGAAAATGGTGGTTTGAGCATGATTATGATCGACTACCTGCAACTTATG 72284 | || || | || | | | |||| ||||||||||||||||| || ||| Sbjct 475 -GCGT-------GAGCACGGCGACATCGCCCTGATCATGATCGACTACCTGCAGCTGATG 526 Query 72285 CGCGTCCCCGAGCTGCAA----GATAACCGAACGCTGGAAATTGCCGAGATTTCTCGCTC 72340 | |||| | ||| || || ||||| || || ||| |||| || || || || Sbjct 527 CAGATCCCAG-GCTCCAGCGGCGACAACCGTACCAACGAGATTTCCGAAATCTCCCGATC 585 Query 72341 ACTGAAGGCGTTGGCGAAGGAATTACAAGTACC-GGTGGTGGCATTGTCACAACTTAATC 72399 || || || |||| |||||||| ||| | || ||||||||| |||| || || || | Sbjct 586 GCTCAAAGCCCTGGCCAAGGAATT-CAACTGCCCGGTGGTGGCGCTGTCCCAGCTCAACC 644 Query 72400 GATCGCTTGAACAGCGTGCGGACAAACGACCGGTAAATTCAGATTTACGTGAATCAGGAG 72459 | || || || || || || |||| || ||||| || || || || || ||||| |||| Sbjct 645 GTTCCCTGGAGCAACGGCCGAACAAGCGCCCGGTGAACTCCGACTTGCGGGAATCCGGAG 704 Query 72460 CAATTGAGCAGGACGCAGACCTGATTATGTTTCTGTATCGCGACGAAGTTTATCACCCGG 72519 | || |||||||| || ||| |||| ||||| |||| |||||||| || |||||||| | Sbjct 705 CGATCGAGCAGGATGCCGACGTGATCATGTTCGTGTACCGCGACGAGGTGTATCACCCCG 764 Query 72520 ATAGCGAAATGAAGGGCATTGCCGAGGTAATTATCGGAAAGCAACGAAATGGCCCAATTG 72579 | | || || |||||||||||| | || ||||| ||||| || || || || || | Sbjct 765 AGACGGAGCACAAAGGCATTGCCGAGATCATCATCGGCAAGCAGCGGAACGGGCCGATCG 824 Query 72580 GC 72581 || Sbjct 825 GC 826 >seq366846 Length=1509 Score = 219 bits (242), Expect = 2e-52 Identities = 486/717 (68%), Gaps = 18/717 (3%) Strand=Plus/Minus Query 71874 ACCGATCTCAATAAGAAGACGGCAG-GGCTT-CAGCCGTCCGATCTCATCATTGTCGCCG 71931 ||||| ||| | ||||||| ||| ||||| |||||||| || | ||||| || |||| Sbjct 957 ACCGACCTCGACGAGAAGAC--CAGCGGCTTGCAGCCGTCTGACTTGATCATCGTTGCCG 900 Query 71932 CCCGCCCATCTATGGGGAAGACCACGTTTGCGATGAATCTCGTCGAAAATGCCGCAGTTC 71991 ||| ||||| ||||| || ||||| ||||||||||| || || ||||| |||| | | Sbjct 899 GCCGTCCATCCATGGGTAAAACCACCTTTGCGATGAACCTGGTGGAAAACGCCGTGCTGC 840 Query 71992 GTAACGATAAGCCCGTATTGGTTTTTAGCCTTGAGATGCCGAGCCACCAGCTGATGATGC 72051 | | ||| || ||||| |||||| || |||||||| | | | |||| |||| Sbjct 839 GCAGCGACAAAGCCGTACTGGTTTACTCGCTGGAGATGCCAGGTGAATCGTTGATCATGC 780 Query 72052 GCTCACTGGCTTCTCTTGCACGCGTTGATCAGACTCGTATTCGGACAGGGCAACTTAACG 72111 | || | || || | || | || ||||| | || | || | || | | Sbjct 779 GTATGCTCTCGTCGCTCGGCCGTATCGACCAGACCAAGGTGCGAGCCGGCCGCCTGGAAG 720 Query 72112 ACGAGGATTGGGCGCGGGTTTCTGGCGCAATGGGT-ATTCTGTTGGACAAGCAGAATATT 72170 |||| |||||| |||| ||| || ||| | ||| | || | | || | Sbjct 719 ACGACGATTGGCCGCGC----CTGACGTCGGCGGTCAACCTGCTTAACGACCGCAAGCTG 664 Query 72171 TTTATTGATGACTCAAGCGCCCTGACGCCGACAGAGCTACGTTCCCGCGCTCGTCGTGTT 72230 || || |||||| | || | | || | ||| | ||| | || | || || | | Sbjct 663 TTCATCGATGACACCGCCGGTATCAGCCCATCGGAGATGCGTGCACGTACCCGCCG-GCT 605 Query 72231 TATAAA-GAAAATGGTGGTTTGAGCATGATTATGATCGACTACCTGCAACTTATGCGCGT 72289 || || | || | | | |||| ||||||||||||||||| || |||| | Sbjct 604 GGTACGTGAGCACGGCGACATCGCCCTGATCATGATCGACTACCTGCAGCTGATGCAGAT 545 Query 72290 CCCCGAGCTGCAA----GATAACCGAACGCTGGAAATTGCCGAGATTTCTCGCTCACTGA 72345 || | ||| || || ||||| || || ||| |||| || || || || || | Sbjct 544 TCCAG-GCTCCAGTGGTGACAACCGCACCAACGAGATTTCCGAAATCTCGCGGTCGCTCA 486 Query 72346 AGGCGTTGGCGAAGGAATTACAAGTACC-GGTGGTGGCATTGTCACAACTTAATCGATCG 72404 |||| |||| |||||||| ||| | || ||||||||| |||| || || || || || Sbjct 485 AGGCCCTGGCCAAGGAATT-CAACTGCCCGGTGGTGGCGCTGTCCCAGCTCAACCGTTCC 427 Query 72405 CTTGAACAGCGTGCGGACAAACGACCGGTAAATTCAGATTTACGTGAATCAGGAGCAATT 72464 || ||||| || || |||| || ||||| || || || || |||||||| ||||| || Sbjct 426 CTGGAACAACGCCCGAACAAGCGCCCGGTGAACTCCGACTTGCGTGAATCCGGAGCGATC 367 Query 72465 GAGCAGGACGCAGACCTGATTATGTTTCTGTATCGCGACGAAGTTTATCACCCGGATAGC 72524 |||||||| || ||| |||| ||||| |||| |||||||| || |||||||| || | Sbjct 366 GAGCAGGATGCTGACGTGATCATGTTCGTGTACCGCGACGAGGTGTATCACCCCGAGACG 307 Query 72525 GAAATGAAGGGCATTGCCGAGGTAATTATCGGAAAGCAACGAAATGGCCCAATTGGC 72581 ||| || ||||||||||| | || ||||| ||||| || || || ||||||||| Sbjct 306 GAACACAAAGGCATTGCCGAAATCATCATCGGCAAGCAGCGGAACGGACCAATTGGC 250 >seq2815396 Length=244 Score = 152 bits (168), Expect = 3e-32 Identities = 174/231 (75%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 72352 TGGCGAAGGAATTACAAGTACC-GGTGGTGGCATTGTCACAACTTAATCGATCGCTTGAA 72410 |||| |||||||| ||| | || ||||||||| |||| || || || || || || ||| Sbjct 242 TGGCCAAGGAATT-CAACTGCCCGGTGGTGGCGCTGTCGCAGCTCAACCGTTCCCTGGAA 184 Query 72411 CAGCGTGCGGACAAACGACCGGTAAATTCAGATTTACGTGAATCAGGAGCAATTGAGCAG 72470 |||||| | |||| || ||||| || || || | || ||||| ||||| || |||||| Sbjct 183 CAGCGTCCCAACAAGCGCCCGGTGAACTCCGACCTGCGCGAATCCGGAGCGATCGAGCAG 124 Query 72471 GACGCAGACCTGATTATGTTTCTGTATCGCGACGAAGTTTATCACCCGGATAGCGAAATG 72530 || || ||| |||| |||||| |||| || ||||| || || ||||| || | ||| Sbjct 123 GATGCTGACGTGATCATGTTTGTGTACCGGGACGAGGTGTACCACCCCGAAACGGAACAT 64 Query 72531 AAGGGCATTGCCGAGGTAATTATCGGAAAGCAACGAAATGGCCCAATTGGC 72581 || |||||||||||| | || ||||| ||||| || || || || || ||| Sbjct 63 AAAGGCATTGCCGAGATCATCATCGGCAAGCAGCGGAACGGGCCGATCGGC 13 >seq326935 Length=13877 Score = 138 bits (152), Expect = 7e-28 Identities = 439/668 (66%), Gaps = 21/668 (3%) Strand=Plus/Plus Query 8111 TAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTG 8170 ||||| |||||||| |||| | | ||| | || || ||||| || | | || | Sbjct 1791 TAGCCTGCATCGGCGCAGACCACGTTCTCAGCACCGTGTAGCAGTTTGTCGACTTGGGTT 1850 Query 8171 AGGTCATGCTCGTTGGCCGCGGTGGTGACCAGGCTGTGGGTCAGGCC--ACTCTTGGCAT 8228 | ||| | |||||||||| ||| |||| |||||| ||| || | || | | | Sbjct 1851 ATGTCCGCCACGTTGGCCGCAGTGACCACCACGCTGTGCACCAGCCCCGAGTCATCGTA- 1909 Query 8229 CGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCA 8288 |||||||||||| || || ||| |||| |||| ||||| ||||| || || |||| Sbjct 1910 -GACACCAATGTGCGCTTTGGCGCCGAAGTAATACTGGTTGCCCTTCTTCGTTTGGTGCA 1968 Query 8289 TCTCCGGATCGCG-TTGCTGCTCTTTGTTCTTGGTCGAGCTGGGTGCCTCAATGATGGTG 8347 | ||||| ||||| || ||| || |||||||||||||| |||| || | ||| | ||| Sbjct 1969 TTTCCGGGTCGCGTTTACTG-TCCTTGTTCTTGGTCGAAGTGGGCGCATGAATCAGCGTG 2027 Query 8348 GCATCGACCAAGGTGCCTTGAGTCATCATGAC--GCCTGCTTCGGCCAGCCAGCGATTGA 8405 |||||||| | |||||||| ||| |||| ||| ||| |||| ||| ||||| Sbjct 2028 GCATCGACGATGGTGCCTT--GTCGCAGTGACAGGCCACGCTCGCCCAGATAGCCATTGA 2085 Query 8406 TGGTCTTGAACAATTGGCG-GGCCAGTTGATGCTGCTCCAGCAGGTGGCGGAAATTCATG 8464 | | | |||| | ||||| | || | ||||||||| | ||||| || | Sbjct 2086 T-CACGCCGAGAATTCCAGTGGCCAACTCGTGTTTTTCCAGCAGGCGACGGAAGTTGAGA 2144 Query 8465 ATGGTGGTGCGGTCCGGCAAGGCGCTATCCAGGGATAACCGGGCAAACAGACGCATGGAG 8524 |||||||| ||| || | ||| |||||| | | || |||| | |||| | Sbjct 2145 ATGGTGGTTTCGTCTGG-GATTCGC--TCCAGGCTCAGGCCGGAAAACTGGCGCAAGATC 2201 Query 8525 GCGATTTCGTACAGAGCATCTTCCATCGCGCCATCGCTCAGGTTGTACCAATGCTGCATG 8584 | | |||||||| || ||||||||||| ||| || |||| | ||||||| Sbjct 2202 GTCGTCTCGTACAGCGCCTCTTCCATCGCCGGATCACTGTAACCAAACCAGTTCTGCATG 2261 Query 8585 CAGTGAATGCGTAGCATGGTTTCCAGCGGATA---AGGTCGCCGGCCATTACCAGCCTTG 8641 |||| || ||||| | || |||||| || || | ||| | | |||| Sbjct 2262 AGATGAACCCGCAGCATCGCCATCAACGGATACGCCGGACGACCGCCTT---CGCCCTTC 2318 Query 8642 GGGTAAAACGGCTCGATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGG 8701 |||||| || ||||| | ||| || | ||| |||| | | | ||||| | Sbjct 2319 GGGTAATGGGGTTCGATCAGAGCCATCAAACCCTTCCAAGGCACGACCCGATCCATCTCG 2378 Query 8702 GACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAG 8761 || ||| | || || | |||||| |||||||| | | | || |||||||||| Sbjct 2379 ATCAGGAACAGTTCCTTACGGGTCTGCTTGCGCTTACCGGCGTACTCGGCGTCGGCGAAG 2438 Query 8762 GTAAGTTG 8769 || | ||| Sbjct 2439 GTCATTTG 2446 >seq3087968 Length=6546 Score = 134 bits (148), Expect = 8e-27 Identities = 136/177 (77%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 66961 GGTTGTATTTATGGACCGCAGCGAAAGGTGGCCTGGAGAATCCTTGATGCCCAATACTTC 67020 |||||| | |||||||| | ||| | || ||| | |||| || |||||||| ||| Sbjct 1 GGTTGTGTGTATGGACCCAAAAGAACAATCGCGTGGCGGGTCCTGGACGCCCAATATTTC 60 Query 67021 GGAGTGGCACAACGACGCCGACGCGTGTTTGTTGTCGCAAGTGCTCGAACAGACCTCGAT 67080 || |||| ||||||||||| || ||||| |||||||||||||||||| | ||||| Sbjct 61 GGCCTGGCCCAACGACGCCGTCGTGTGTTCGTTGTCGCAAGTGCTCGAGACGGGTTCGAT 120 Query 67081 CCCGCAACGGTACTTTTTGAGTTCGAAGGCGTGCGCCGGAATATTGCGCCGAGGCGA 67137 || | ||||||||||||| ||||||| |||||||| ||| ||||||| | ||| Sbjct 121 CCAACCGAGGTACTTTTTGAGCGCGAAGGCTTGCGCCGGGATACTGCGCCGCGCCGA 177 >seq2453999 Length=160 Score = 118 bits (130), Expect = 6e-22 Identities = 118/153 (77%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 72429 CCGGTAAATTCAGATTTACGTGAATCAGGAGCAATTGAGCAGGACGCAGACCTGATTATG 72488 ||||| || || || || |||||||| ||||| || |||||||| || ||| |||| ||| Sbjct 2 CCGGTGAACTCCGACTTGCGTGAATCCGGAGCGATCGAGCAGGATGCTGACGTGATCATG 61 Query 72489 TTTCTGTATCGCGACGAAGTTTATCACCCGGATAGCGAAATGAAGGGCATTGCCGAGGTA 72548 ||| |||| |||||||| || || ||||| || | ||| || |||||||||||| | Sbjct 62 TTTGTGTACCGCGACGAGGTGTACCACCCCGAGACCGAGCACAAAGGCATTGCCGAGATC 121 Query 72549 ATTATCGGAAAGCAACGAAATGGCCCAATTGGC 72581 || ||||| ||||| || || || || || ||| Sbjct 122 ATCATCGGCAAGCAGCGGAACGGGCCGATCGGC 154 >seq108461 Length=6150 Score = 118 bits (130), Expect = 6e-22 Identities = 94/113 (83%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 67025 TGGCACAACGACGCCGACGCGTGTTTGTTGTCGCAAGTGCTCGAACAGACCTCGATCCCG 67084 |||| ||||||||||| || ||||| |||||||||||||||||| | |||||||| Sbjct 185 TGGCCCAACGACGCCGTCGTGTGTTCGTTGTCGCAAGTGCTCGAGACGGGTTCGATCCCA 244 Query 67085 CAACGGTACTTTTTGAGTTCGAAGGCGTGCGCCGGAATATTGCGCCGAGGCGA 67137 || |||||||||||||| ||||||||||||||| ||| ||||||| | ||| Sbjct 245 CAGCGGTACTTTTTGAGCGAGAAGGCGTGCGCCGGGATACTGCGCCGCGCCGA 297 >seq254255 Length=1937 Score = 113 bits (124), Expect = 3e-20 Identities = 208/303 (69%), Gaps = 4/303 (1%) Strand=Plus/Minus Query 66426 CTATGGATCTGTTTGCAGTGGAATTGAAGCCGCGAGTATTGCCTGGGAACCGTTGGGTAT 66485 ||| || ||||| ||||| || ||||||||||||| |||||| | ||| |||| || Sbjct 301 CTACGGCTCTGTGTGCAGCGGCATTGAAGCCGCGACACAAGCCTGGCACCCGCTGGGCAT 242 Query 66486 GCGTCCGGCGTGGTTTGCTGAAATCGAGCCTTTTCCATCTGCCGTTCTTGCGCACCGCTG 66545 ||| | || ||||| || || || ||||| || || || || || || || |||| || Sbjct 241 GCGCGCCGCCTGGTTCGCCGAGATTGAGCCGTTCCCCTCGGCGGTCCTGGCCCACCACTA 182 Query 66546 GCCCCATGTCGCCAACCTTGGCGACATGACAAAACTTGCCAAAAAAGTCCTGGCTGGGGA 66605 ||| | || | |||| ||||||||||| || || ||| || ||||| || | Sbjct 181 CCCCGACGTGCCGAACCACGGCGACATGACCAAGCTGGCCGCCCTGGTGCTGGCCGGCAA 122 Query 66606 AATCGAATCCCCTGATGTGCTCGTCTGGGGTACGCCTTGTCAGGC--ATTCAGTATCGCG 66663 ||| | | || |||||||| ||| | || || || || ||||| ||||| | || Sbjct 121 GATCCCAGCGCCGGATGTGCTGGTCGGCGGCACCCCATGCCAGGCCTTTTCAG--TTGCC 64 Query 66664 GGCTTACGTGGTGGGCTTGATGATGAACGCGGCGCGCTAACTTTGAAGTATGTGGAGCTT 66723 || | || | || || || |||||||| || || | || || ||||||||| Sbjct 63 GGTATGCGCGAAGGCCTCACCGACCCGCGCGGCGCCCTCACCATCAAATACGTGGAGCTT 4 Query 66724 GCA 66726 ||| Sbjct 3 GCA 1 >seq3016640 Length=777 Score = 111 bits (122), Expect = 9e-20 Identities = 132/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 71874 ACCGATCTCAATAAGAAGACGGCAGGGCTTCAGCCGTCCGATCTCATCATTGTCGCCGCC 71933 ||||| ||| | ||||||| || || |||||||| || | ||||| ||||||| | Sbjct 539 ACCGACCTCGACGAGAAGACCAGCGGCCTGCAGCCGTCAGACTTGATCATCGTCGCCGGC 480 Query 71934 CGCCCATCTATGGGGAAGACCACGTTTGCGATGAATCTCGTCGAAAATGCCGCAGTTCGT 71993 || ||||| ||||| || ||||| ||||||||||| ||||| ||||| |||| | || Sbjct 479 CGTCCATCCATGGGTAAAACCACCTTTGCGATGAACCTCGTGGAAAACGCCGTGTTGCGC 420 Query 71994 AACGATAAGCCCGTATTGGTTTTTAGCCTTGAGATGCCGAGCCACCAGCTGATGATGCG 72052 | ||| ||| |||| |||| | ||| |||||||| || | |||||| ||||| Sbjct 419 AGCGACAAGACCGTGCTGGTGTACTCCCTCGAGATGCCAGGCGAATCGCTGATCATGCG 361 >seq3085141 Length=3208 Score = 100 bits (110), Expect = 2e-16 Identities = 118/160 (74%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 66426 CTATGGATCTGTTTGCAGTGGAATTGAAGCCGCGAGTATTGCCTGGGAACCGTTGGGTAT 66485 ||| || ||||||||| ||| || |||||||||| |||||| | |||||||| || Sbjct 169 CTACGGTTCTGTTTGCTCTGGCATCGAAGCCGCGACACAGGCCTGGCACCCGTTGGGCAT 110 Query 66486 GCGTCCGGCGTGGTTTGCTGAAATCGAGCCTTTTCCATCTGCCGTTCTTGCGCACCGCTG 66545 ||| | || ||||| ||||| || ||||| || || || || || || || |||| || Sbjct 109 GCGCGCCGCCTGGTTCGCTGAGATTGAGCCGTTCCCCTCGGCGGTGCTGGCCCACCACTA 50 Query 66546 GCCCCATGTCGCCAACCTTGGCGACATGACAAAACTTGCC 66585 ||| | || | |||| ||||||||||| || || ||| Sbjct 49 CCCCGACGTGCCGAACCACGGCGACATGACCAAGCTGGCC 10 >seq268701 Length=8118 Score = 95.1 bits (104), Expect = 7e-15 Identities = 151/216 (70%), Gaps = 3/216 (1%) Strand=Plus/Minus Query 21178 ACAAGCAAACGGGCCAACAGAAAGAGCAAACAGAATGGCATAAAGTCGTTTTGTTCGGAA 21237 ||||||| || ||||| || ||| |||| |||||||| || ||||||| | Sbjct 8118 ACAAGCAGACTGGCCAGAAGGTCGAGAAAACCGAATGGCACCGTGTGTCGATGTTCGGCA 8059 Query 21238 AACTTGCTGAAATTGCGAGTGAGTATTTACGAAAAGGTTCTCAGGTCTACATCGAAGGGA 21297 | | || ||||| || |||| || | || |||||||| ||||| ||||| ||||| | Sbjct 8058 AGGTGGCAGAAATCGCCGGTGAATACCTGCGCAAAGGTTCGCAGGTTTACATTGAAGGCA 7999 Query 21298 AACTTAAAACCCGTAAGTGGACAGATGACGCCGGTGTAGAACGTTACACGACGGAAATTA 21357 |||| ||||||| ||||| | | |||| | | | |||||||| || ||||| Sbjct 7998 AACTGCAAACCCGCGAGTGGGAAAAAGACGGCA---TCAAGCGTTACACCACCGAAATCG 7942 Query 21358 TCGTCAGCCAGGGCGGCACCATGCAAATGATCGGCG 21393 | ||| | | |||||||||||| || |||||| Sbjct 7941 TGGTCGACATGCAAGGCACCATGCAACTGCTCGGCG 7906 >seq2262318 Length=133 Score = 91.5 bits (100), Expect = 9e-14 Identities = 101/132 (77%), Gaps = 2/132 (2%) Strand=Plus/Plus Query 72352 TGGCGAAGGAATTACAAGTACC-GGTGGTGGCATTGTCACAACTTAATCGATCGCTTGAA 72410 |||| |||||||| ||| | || ||||||||| |||| || || || || || || ||| Sbjct 3 TGGCCAAGGAATT-CAACTGCCCGGTGGTGGCGCTGTCGCAGCTCAACCGTTCCCTGGAA 61 Query 72411 CAGCGTGCGGACAAACGACCGGTAAATTCAGATTTACGTGAATCAGGAGCAATTGAGCAG 72470 || ||| | |||| || ||||| || || || || |||||||| ||||| || |||||| Sbjct 62 CAACGTCCCAACAAGCGCCCGGTGAACTCCGACTTGCGTGAATCCGGAGCGATCGAGCAG 121 Query 72471 GACGCAGACCTG 72482 || || ||| || Sbjct 122 GATGCTGACGTG 133 >seq2951953 Length=451 Score = 89.7 bits (98), Expect = 3e-13 Identities = 151/218 (69%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 21176 CGACAAGCAAACGGGCCAACAGAAAGAGCAAACAGAATGGCATAAAGTCGTTTTGTTCGG 21235 ||||||||| || | | | |||||| |||| || ||||| || |||||||| Sbjct 400 CGACAAGCAGACCAACGAGCGCAAAGAGAAAACCGAGTGGCACCGCGTGTCGTTGTTCGG 341 Query 21236 AAAACTTGCTGAAATTGCGAGTGAGTATTTACGAAAAGGTTCTCAGGTCTACATCGAAGG 21295 || |||| || || || ||||||| | || |||||||| ||||||||||||||||| Sbjct 340 CAAGGTTGCAGAGATCGCTGGTGAGTACCTGCGCAAAGGTTCGCAGGTCTACATCGAAGG 281 Query 21296 GAAACTTAAAACCCGTAAGTGGACAGATGACGCCGGTGTAGAACGTTACACGACGGAAAT 21355 || || ||||||| ||||| || | | ||| | | |||||||| || ||||| Sbjct 280 CAAGCTGCAAACCCGCGAGTGG---GAAAAAGACGGCATCAAGCGTTACACCACTGAAAT 224 Query 21356 TATCGTCAGCCAGGGCGGCACCATGCAAATGATCGGCG 21393 | ||| | | || |||||||| || | |||| Sbjct 223 CGTAGTCGACATGCAAGGAACCATGCAGTTGCTGGGCG 186 >seq2799564 Length=235 Score = 84.2 bits (92), Expect = 1e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 21177 GACAAGCAAACGGGCCAACAGAAAGAGCAAACAGAATGGCATAAAGTCGTTTTGTTCGGA 21236 |||||||| || ||||| || ||| |||| |||||||| || ||||||| Sbjct 65 GACAAGCAGACCGGCCAGAAGGTCGAGAAAACCGAATGGCACCGCGTGTCGATGTTCGGC 124 Query 21237 AAACTTGCTGAAATTGCGAGTGAGTATTTACGAAAAGGTTCTCAGGTCTACATCGAAGGG 21296 || |||| || || || | ||||| | || |||||||| ||||| ||||||||||| Sbjct 125 AAGGTTGCAGAGATCGCCGGCGAGTACCTGCGCAAAGGTTCGCAGGTTTACATCGAAGGC 184 Query 21297 AAACTTAAAACCCGTAAGTGG 21317 ||||| ||||||| ||||| Sbjct 185 AAACTGCAAACCCGCGAGTGG 205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 291821054756031