Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_005856.1
Length=94800
Score E
Sequences producing significant alignments: (Bits) Value
seq3047186 224 6e-54
seq3023355 223 2e-53
seq366846 219 2e-52
seq2815396 152 3e-32
seq326935 138 7e-28
seq3087968 134 8e-27
seq2453999 118 6e-22
seq108461 118 6e-22
seq254255 113 3e-20
seq3016640 111 9e-20
seq3085141 100 2e-16
seq268701 95.1 7e-15
seq2262318 91.5 9e-14
seq2951953 89.7 3e-13
seq2799564 84.2 1e-11
>seq3047186
Length=1103
Score = 224 bits (248), Expect = 6e-54
Identities = 486/723 (67%), Gaps = 12/723 (2%)
Strand=Plus/Plus
Query 71865 ACGGGATTTACCGATCTCAATAAGAAGACGGCAGGGCTTCAGCCGTCCGATCTCATCATT 71924
|| || | |||||| ||| || ||||||| || || ||||||||||| || |||||
Sbjct 230 ACCGGCTATACCGACCTCGATGAGAAGACCAGCGGCCTGCAGCCGTCCGACCTGATCATC 289
Query 71925 GTCGCCGCCCGCCCATCTATGGGGAAGACCACGTTTGCGATGAATCTCGTCGAAAATGCC 71984
||||||| ||| || || ||||| |||||||| || || ||||| || || || || |||
Sbjct 290 GTCGCCGGCCGTCCTTCGATGGGTAAGACCACCTTCGCCATGAACCTGGTGGAGAACGCC 349
Query 71985 GCAGTTCGTAACGATAAGCCCGTATTGGTTTTTAGCCTTGAGATGCCGAGCCACCAGCTG 72044
| | | || | ||| ||| | || |||| | ||| |||||||| | | ||||
Sbjct 350 GTACTGCGCAGCGACAAGGCGGTGCTGGTGTACTCCCTCGAGATGCCAGGTGAATCGCTG 409
Query 72045 ATGATGCGCTCACTGGCTTCTCTTGCACGCGTTGATCAGACTCGTATTCGGACAGGGCAA 72104
|| ||||| || | || || | || | || ||||| | || | || |||
Sbjct 410 ATCATGCGTATGCTCTCGTCCCTGGGTCGTATCGACCAGACCAAGGTGCGTTCCGGCCAA 469
Query 72105 CTTAACGACGAGGATTGGGCGCGGGTTTCTGGCGCAATGGGTATTCTGTTGGACAAGCAG 72164
| | ||||| || ||| | || | | || || | ||| | || | |
Sbjct 470 TTGGAGGACGACGACTGGCCACGCCTGACCTCGGC---GGTCAACCTGCTTAACGACCGC 526
Query 72165 AATATTTTTATTGATGACTCAAGCGCCCTGACGCCGACAGAGCTACGTTCCCGCGCTCGT 72224
|| | || || |||||| | || | | || ||||| | ||| | || | ||
Sbjct 527 AAGCTGTTCATCGATGACACCGCCGGTATCAGCCCTTCAGAGATGCGTGCGCGTACCCGC 586
Query 72225 CGTGTTTATAAAGAAAATGGTGGTTTGAGCATGATTATGATCGACTACCTGCAACTTATG 72284
|| | ||| | || | | | |||| ||||||||||||||||| | |||
Sbjct 587 CGCCTGGTGCGTGAACACGGCGACATCGCCCTGATCATGATCGACTACCTGCAGTTGATG 646
Query 72285 CGCGTCCCCG-----AGCTGCAAGATAACCGAACGCTGGAAATTGCCGAGATTTCTCGCT 72339
| |||| | ||| || || ||||| || || ||| |||| || || || |
Sbjct 647 CAGATCCCGGGTTCCAGCGGC--GACAACCGCACCAACGAGATTTCCGAAATCTCCCGTT 704
Query 72340 CACTGAAGGCGTTGGCGAAGGAATTACAAGTACC-GGTGGTGGCATTGTCACAACTTAAT 72398
| ||||| || |||| |||||||| ||| | || ||||||||| |||| || || ||
Sbjct 705 CCCTGAAAGCCCTGGCCAAGGAATT-CAACTGCCCGGTGGTGGCGCTGTCCCAGCTCAAC 763
Query 72399 CGATCGCTTGAACAGCGTGCGGACAAACGACCGGTAAATTCAGATTTACGTGAATCAGGA 72458
|| || || ||||| || | |||| || ||||| || || || || |||||||| |||
Sbjct 764 CGCTCCCTGGAACAACGCCCCAACAAGCGCCCGGTGAACTCCGACTTGCGTGAATCCGGA 823
Query 72459 GCAATTGAGCAGGACGCAGACCTGATTATGTTTCTGTATCGCGACGAAGTTTATCACCCG 72518
|| || ||||||||||| ||| |||| ||||| |||| |||||||| || ||||||||
Sbjct 824 GCGATCGAGCAGGACGCCGACGTGATCATGTTCGTGTACCGCGACGAGGTGTATCACCCC 883
Query 72519 GATAGCGAAATGAAGGGCATTGCCGAGGTAATTATCGGAAAGCAACGAAATGGCCCAATT 72578
|| | ||| ||||||||||||||| | || ||||| ||||| || || || || ||
Sbjct 884 GAAACGGAACACAAGGGCATTGCCGAGATCATCATCGGCAAGCAGCGGAACGGGCCTATC 943
Query 72579 GGC 72581
|||
Sbjct 944 GGC 946
>seq3023355
Length=832
Score = 223 bits (246), Expect = 2e-53
Identities = 487/722 (67%), Gaps = 28/722 (4%)
Strand=Plus/Plus
Query 71874 ACCGATCTCAATAAGAAGACGGCAGGGCTTCAGCCGTCCGATCTCATCATTGTCGCCGCC 71933
||||| ||| | |||| || || || ||||||||||| | ||||| ||||||| |
Sbjct 119 ACCGACCTCGACGAGAAAACCAGCGGCCTGCAGCCGTCCGACTTGATCATCGTCGCCGGC 178
Query 71934 CGCCCATCTATGGGGAAGACCACGTTTGCGATGAATCTCGTCGAAAATGCCGCAGTTCGT 71993
|| ||||| ||||| || ||||| ||||||||||| || || ||||| |||| | ||
Sbjct 179 CGTCCATCCATGGGTAAAACCACCTTTGCGATGAACCTGGTGGAAAACGCCGTGTTGCGC 238
Query 71994 AACGATAAGCCCGTATTGGTTTTTAGCCTTGAGATGCCGAGCCACCAGCTGATGATGCGC 72053
| ||| ||| ||||| |||||| || |||||||| || | |||||| |||||
Sbjct 239 AGCGACAAGGCCGTACTGGTTTACTCGCTGGAGATGCCAGGCGAATCGCTGATTATGCGT 298
Query 72054 TCACTGGCTTCTCTTGCACGCGTTGATCAGACTCGTATTCGGACAGGGCAACTTAACGAC 72113
||| | || || | || | || ||||| | || | || | || | |||
Sbjct 299 ATGCTGTCGTCGCTCGGCCGTATCGACCAGACCAAGGTGCGCGCCGGCCGTCTGGAAGAC 358
Query 72114 GAGGATTGGGCGCGGGTTTCTGGCGCAATGGGT-ATTCTGTTGGACAAGCAGAATATTTT 72172
|| |||||| |||| |||| || ||| | ||| | | | | || | ||
Sbjct 359 GACGATTGGCCGCG----TCTGACGTCGGCGGTCAACCTGCTCAATGACCGTAAGTTGTT 414
Query 72173 TATTGATGACTCAAGCGCCCTGACGCCGACAGAGCT------ACGTTCCCGC--GCTCGT 72224
||| |||||| | || | | ||| | ||| | |||| ||||| ||| ||
Sbjct 415 TATCGATGACACCGCCGGTATCAGCCCGTCGGAGATGCGCGCACGTACCCGCCGGCTGGT 474
Query 72225 CGTGTTTATAAAGAAAATGGTGGTTTGAGCATGATTATGATCGACTACCTGCAACTTATG 72284
| || || | || | | | |||| ||||||||||||||||| || |||
Sbjct 475 -GCGT-------GAGCACGGCGACATCGCCCTGATCATGATCGACTACCTGCAGCTGATG 526
Query 72285 CGCGTCCCCGAGCTGCAA----GATAACCGAACGCTGGAAATTGCCGAGATTTCTCGCTC 72340
| |||| | ||| || || ||||| || || ||| |||| || || || ||
Sbjct 527 CAGATCCCAG-GCTCCAGCGGCGACAACCGTACCAACGAGATTTCCGAAATCTCCCGATC 585
Query 72341 ACTGAAGGCGTTGGCGAAGGAATTACAAGTACC-GGTGGTGGCATTGTCACAACTTAATC 72399
|| || || |||| |||||||| ||| | || ||||||||| |||| || || || |
Sbjct 586 GCTCAAAGCCCTGGCCAAGGAATT-CAACTGCCCGGTGGTGGCGCTGTCCCAGCTCAACC 644
Query 72400 GATCGCTTGAACAGCGTGCGGACAAACGACCGGTAAATTCAGATTTACGTGAATCAGGAG 72459
| || || || || || || |||| || ||||| || || || || || ||||| ||||
Sbjct 645 GTTCCCTGGAGCAACGGCCGAACAAGCGCCCGGTGAACTCCGACTTGCGGGAATCCGGAG 704
Query 72460 CAATTGAGCAGGACGCAGACCTGATTATGTTTCTGTATCGCGACGAAGTTTATCACCCGG 72519
| || |||||||| || ||| |||| ||||| |||| |||||||| || |||||||| |
Sbjct 705 CGATCGAGCAGGATGCCGACGTGATCATGTTCGTGTACCGCGACGAGGTGTATCACCCCG 764
Query 72520 ATAGCGAAATGAAGGGCATTGCCGAGGTAATTATCGGAAAGCAACGAAATGGCCCAATTG 72579
| | || || |||||||||||| | || ||||| ||||| || || || || || |
Sbjct 765 AGACGGAGCACAAAGGCATTGCCGAGATCATCATCGGCAAGCAGCGGAACGGGCCGATCG 824
Query 72580 GC 72581
||
Sbjct 825 GC 826
>seq366846
Length=1509
Score = 219 bits (242), Expect = 2e-52
Identities = 486/717 (68%), Gaps = 18/717 (3%)
Strand=Plus/Minus
Query 71874 ACCGATCTCAATAAGAAGACGGCAG-GGCTT-CAGCCGTCCGATCTCATCATTGTCGCCG 71931
||||| ||| | ||||||| ||| ||||| |||||||| || | ||||| || ||||
Sbjct 957 ACCGACCTCGACGAGAAGAC--CAGCGGCTTGCAGCCGTCTGACTTGATCATCGTTGCCG 900
Query 71932 CCCGCCCATCTATGGGGAAGACCACGTTTGCGATGAATCTCGTCGAAAATGCCGCAGTTC 71991
||| ||||| ||||| || ||||| ||||||||||| || || ||||| |||| | |
Sbjct 899 GCCGTCCATCCATGGGTAAAACCACCTTTGCGATGAACCTGGTGGAAAACGCCGTGCTGC 840
Query 71992 GTAACGATAAGCCCGTATTGGTTTTTAGCCTTGAGATGCCGAGCCACCAGCTGATGATGC 72051
| | ||| || ||||| |||||| || |||||||| | | | |||| ||||
Sbjct 839 GCAGCGACAAAGCCGTACTGGTTTACTCGCTGGAGATGCCAGGTGAATCGTTGATCATGC 780
Query 72052 GCTCACTGGCTTCTCTTGCACGCGTTGATCAGACTCGTATTCGGACAGGGCAACTTAACG 72111
| || | || || | || | || ||||| | || | || | || | |
Sbjct 779 GTATGCTCTCGTCGCTCGGCCGTATCGACCAGACCAAGGTGCGAGCCGGCCGCCTGGAAG 720
Query 72112 ACGAGGATTGGGCGCGGGTTTCTGGCGCAATGGGT-ATTCTGTTGGACAAGCAGAATATT 72170
|||| |||||| |||| ||| || ||| | ||| | || | | || |
Sbjct 719 ACGACGATTGGCCGCGC----CTGACGTCGGCGGTCAACCTGCTTAACGACCGCAAGCTG 664
Query 72171 TTTATTGATGACTCAAGCGCCCTGACGCCGACAGAGCTACGTTCCCGCGCTCGTCGTGTT 72230
|| || |||||| | || | | || | ||| | ||| | || | || || | |
Sbjct 663 TTCATCGATGACACCGCCGGTATCAGCCCATCGGAGATGCGTGCACGTACCCGCCG-GCT 605
Query 72231 TATAAA-GAAAATGGTGGTTTGAGCATGATTATGATCGACTACCTGCAACTTATGCGCGT 72289
|| || | || | | | |||| ||||||||||||||||| || |||| |
Sbjct 604 GGTACGTGAGCACGGCGACATCGCCCTGATCATGATCGACTACCTGCAGCTGATGCAGAT 545
Query 72290 CCCCGAGCTGCAA----GATAACCGAACGCTGGAAATTGCCGAGATTTCTCGCTCACTGA 72345
|| | ||| || || ||||| || || ||| |||| || || || || || |
Sbjct 544 TCCAG-GCTCCAGTGGTGACAACCGCACCAACGAGATTTCCGAAATCTCGCGGTCGCTCA 486
Query 72346 AGGCGTTGGCGAAGGAATTACAAGTACC-GGTGGTGGCATTGTCACAACTTAATCGATCG 72404
|||| |||| |||||||| ||| | || ||||||||| |||| || || || || ||
Sbjct 485 AGGCCCTGGCCAAGGAATT-CAACTGCCCGGTGGTGGCGCTGTCCCAGCTCAACCGTTCC 427
Query 72405 CTTGAACAGCGTGCGGACAAACGACCGGTAAATTCAGATTTACGTGAATCAGGAGCAATT 72464
|| ||||| || || |||| || ||||| || || || || |||||||| ||||| ||
Sbjct 426 CTGGAACAACGCCCGAACAAGCGCCCGGTGAACTCCGACTTGCGTGAATCCGGAGCGATC 367
Query 72465 GAGCAGGACGCAGACCTGATTATGTTTCTGTATCGCGACGAAGTTTATCACCCGGATAGC 72524
|||||||| || ||| |||| ||||| |||| |||||||| || |||||||| || |
Sbjct 366 GAGCAGGATGCTGACGTGATCATGTTCGTGTACCGCGACGAGGTGTATCACCCCGAGACG 307
Query 72525 GAAATGAAGGGCATTGCCGAGGTAATTATCGGAAAGCAACGAAATGGCCCAATTGGC 72581
||| || ||||||||||| | || ||||| ||||| || || || |||||||||
Sbjct 306 GAACACAAAGGCATTGCCGAAATCATCATCGGCAAGCAGCGGAACGGACCAATTGGC 250
>seq2815396
Length=244
Score = 152 bits (168), Expect = 3e-32
Identities = 174/231 (75%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 72352 TGGCGAAGGAATTACAAGTACC-GGTGGTGGCATTGTCACAACTTAATCGATCGCTTGAA 72410
|||| |||||||| ||| | || ||||||||| |||| || || || || || || |||
Sbjct 242 TGGCCAAGGAATT-CAACTGCCCGGTGGTGGCGCTGTCGCAGCTCAACCGTTCCCTGGAA 184
Query 72411 CAGCGTGCGGACAAACGACCGGTAAATTCAGATTTACGTGAATCAGGAGCAATTGAGCAG 72470
|||||| | |||| || ||||| || || || | || ||||| ||||| || ||||||
Sbjct 183 CAGCGTCCCAACAAGCGCCCGGTGAACTCCGACCTGCGCGAATCCGGAGCGATCGAGCAG 124
Query 72471 GACGCAGACCTGATTATGTTTCTGTATCGCGACGAAGTTTATCACCCGGATAGCGAAATG 72530
|| || ||| |||| |||||| |||| || ||||| || || ||||| || | |||
Sbjct 123 GATGCTGACGTGATCATGTTTGTGTACCGGGACGAGGTGTACCACCCCGAAACGGAACAT 64
Query 72531 AAGGGCATTGCCGAGGTAATTATCGGAAAGCAACGAAATGGCCCAATTGGC 72581
|| |||||||||||| | || ||||| ||||| || || || || || |||
Sbjct 63 AAAGGCATTGCCGAGATCATCATCGGCAAGCAGCGGAACGGGCCGATCGGC 13
>seq326935
Length=13877
Score = 138 bits (152), Expect = 7e-28
Identities = 439/668 (66%), Gaps = 21/668 (3%)
Strand=Plus/Plus
Query 8111 TAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTG 8170
||||| |||||||| |||| | | ||| | || || ||||| || | | || |
Sbjct 1791 TAGCCTGCATCGGCGCAGACCACGTTCTCAGCACCGTGTAGCAGTTTGTCGACTTGGGTT 1850
Query 8171 AGGTCATGCTCGTTGGCCGCGGTGGTGACCAGGCTGTGGGTCAGGCC--ACTCTTGGCAT 8228
| ||| | |||||||||| ||| |||| |||||| ||| || | || | | |
Sbjct 1851 ATGTCCGCCACGTTGGCCGCAGTGACCACCACGCTGTGCACCAGCCCCGAGTCATCGTA- 1909
Query 8229 CGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCA 8288
|||||||||||| || || ||| |||| |||| ||||| ||||| || || ||||
Sbjct 1910 -GACACCAATGTGCGCTTTGGCGCCGAAGTAATACTGGTTGCCCTTCTTCGTTTGGTGCA 1968
Query 8289 TCTCCGGATCGCG-TTGCTGCTCTTTGTTCTTGGTCGAGCTGGGTGCCTCAATGATGGTG 8347
| ||||| ||||| || ||| || |||||||||||||| |||| || | ||| | |||
Sbjct 1969 TTTCCGGGTCGCGTTTACTG-TCCTTGTTCTTGGTCGAAGTGGGCGCATGAATCAGCGTG 2027
Query 8348 GCATCGACCAAGGTGCCTTGAGTCATCATGAC--GCCTGCTTCGGCCAGCCAGCGATTGA 8405
|||||||| | |||||||| ||| |||| ||| ||| |||| ||| |||||
Sbjct 2028 GCATCGACGATGGTGCCTT--GTCGCAGTGACAGGCCACGCTCGCCCAGATAGCCATTGA 2085
Query 8406 TGGTCTTGAACAATTGGCG-GGCCAGTTGATGCTGCTCCAGCAGGTGGCGGAAATTCATG 8464
| | | |||| | ||||| | || | ||||||||| | ||||| || |
Sbjct 2086 T-CACGCCGAGAATTCCAGTGGCCAACTCGTGTTTTTCCAGCAGGCGACGGAAGTTGAGA 2144
Query 8465 ATGGTGGTGCGGTCCGGCAAGGCGCTATCCAGGGATAACCGGGCAAACAGACGCATGGAG 8524
|||||||| ||| || | ||| |||||| | | || |||| | |||| |
Sbjct 2145 ATGGTGGTTTCGTCTGG-GATTCGC--TCCAGGCTCAGGCCGGAAAACTGGCGCAAGATC 2201
Query 8525 GCGATTTCGTACAGAGCATCTTCCATCGCGCCATCGCTCAGGTTGTACCAATGCTGCATG 8584
| | |||||||| || ||||||||||| ||| || |||| | |||||||
Sbjct 2202 GTCGTCTCGTACAGCGCCTCTTCCATCGCCGGATCACTGTAACCAAACCAGTTCTGCATG 2261
Query 8585 CAGTGAATGCGTAGCATGGTTTCCAGCGGATA---AGGTCGCCGGCCATTACCAGCCTTG 8641
|||| || ||||| | || |||||| || || | ||| | | ||||
Sbjct 2262 AGATGAACCCGCAGCATCGCCATCAACGGATACGCCGGACGACCGCCTT---CGCCCTTC 2318
Query 8642 GGGTAAAACGGCTCGATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGG 8701
|||||| || ||||| | ||| || | ||| |||| | | | ||||| |
Sbjct 2319 GGGTAATGGGGTTCGATCAGAGCCATCAAACCCTTCCAAGGCACGACCCGATCCATCTCG 2378
Query 8702 GACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAG 8761
|| ||| | || || | |||||| |||||||| | | | || ||||||||||
Sbjct 2379 ATCAGGAACAGTTCCTTACGGGTCTGCTTGCGCTTACCGGCGTACTCGGCGTCGGCGAAG 2438
Query 8762 GTAAGTTG 8769
|| | |||
Sbjct 2439 GTCATTTG 2446
>seq3087968
Length=6546
Score = 134 bits (148), Expect = 8e-27
Identities = 136/177 (77%), Gaps = 0/177 (0%)
Strand=Plus/Plus
Query 66961 GGTTGTATTTATGGACCGCAGCGAAAGGTGGCCTGGAGAATCCTTGATGCCCAATACTTC 67020
|||||| | |||||||| | ||| | || ||| | |||| || |||||||| |||
Sbjct 1 GGTTGTGTGTATGGACCCAAAAGAACAATCGCGTGGCGGGTCCTGGACGCCCAATATTTC 60
Query 67021 GGAGTGGCACAACGACGCCGACGCGTGTTTGTTGTCGCAAGTGCTCGAACAGACCTCGAT 67080
|| |||| ||||||||||| || ||||| |||||||||||||||||| | |||||
Sbjct 61 GGCCTGGCCCAACGACGCCGTCGTGTGTTCGTTGTCGCAAGTGCTCGAGACGGGTTCGAT 120
Query 67081 CCCGCAACGGTACTTTTTGAGTTCGAAGGCGTGCGCCGGAATATTGCGCCGAGGCGA 67137
|| | ||||||||||||| ||||||| |||||||| ||| ||||||| | |||
Sbjct 121 CCAACCGAGGTACTTTTTGAGCGCGAAGGCTTGCGCCGGGATACTGCGCCGCGCCGA 177
>seq2453999
Length=160
Score = 118 bits (130), Expect = 6e-22
Identities = 118/153 (77%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 72429 CCGGTAAATTCAGATTTACGTGAATCAGGAGCAATTGAGCAGGACGCAGACCTGATTATG 72488
||||| || || || || |||||||| ||||| || |||||||| || ||| |||| |||
Sbjct 2 CCGGTGAACTCCGACTTGCGTGAATCCGGAGCGATCGAGCAGGATGCTGACGTGATCATG 61
Query 72489 TTTCTGTATCGCGACGAAGTTTATCACCCGGATAGCGAAATGAAGGGCATTGCCGAGGTA 72548
||| |||| |||||||| || || ||||| || | ||| || |||||||||||| |
Sbjct 62 TTTGTGTACCGCGACGAGGTGTACCACCCCGAGACCGAGCACAAAGGCATTGCCGAGATC 121
Query 72549 ATTATCGGAAAGCAACGAAATGGCCCAATTGGC 72581
|| ||||| ||||| || || || || || |||
Sbjct 122 ATCATCGGCAAGCAGCGGAACGGGCCGATCGGC 154
>seq108461
Length=6150
Score = 118 bits (130), Expect = 6e-22
Identities = 94/113 (83%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 67025 TGGCACAACGACGCCGACGCGTGTTTGTTGTCGCAAGTGCTCGAACAGACCTCGATCCCG 67084
|||| ||||||||||| || ||||| |||||||||||||||||| | ||||||||
Sbjct 185 TGGCCCAACGACGCCGTCGTGTGTTCGTTGTCGCAAGTGCTCGAGACGGGTTCGATCCCA 244
Query 67085 CAACGGTACTTTTTGAGTTCGAAGGCGTGCGCCGGAATATTGCGCCGAGGCGA 67137
|| |||||||||||||| ||||||||||||||| ||| ||||||| | |||
Sbjct 245 CAGCGGTACTTTTTGAGCGAGAAGGCGTGCGCCGGGATACTGCGCCGCGCCGA 297
>seq254255
Length=1937
Score = 113 bits (124), Expect = 3e-20
Identities = 208/303 (69%), Gaps = 4/303 (1%)
Strand=Plus/Minus
Query 66426 CTATGGATCTGTTTGCAGTGGAATTGAAGCCGCGAGTATTGCCTGGGAACCGTTGGGTAT 66485
||| || ||||| ||||| || ||||||||||||| |||||| | ||| |||| ||
Sbjct 301 CTACGGCTCTGTGTGCAGCGGCATTGAAGCCGCGACACAAGCCTGGCACCCGCTGGGCAT 242
Query 66486 GCGTCCGGCGTGGTTTGCTGAAATCGAGCCTTTTCCATCTGCCGTTCTTGCGCACCGCTG 66545
||| | || ||||| || || || ||||| || || || || || || || |||| ||
Sbjct 241 GCGCGCCGCCTGGTTCGCCGAGATTGAGCCGTTCCCCTCGGCGGTCCTGGCCCACCACTA 182
Query 66546 GCCCCATGTCGCCAACCTTGGCGACATGACAAAACTTGCCAAAAAAGTCCTGGCTGGGGA 66605
||| | || | |||| ||||||||||| || || ||| || ||||| || |
Sbjct 181 CCCCGACGTGCCGAACCACGGCGACATGACCAAGCTGGCCGCCCTGGTGCTGGCCGGCAA 122
Query 66606 AATCGAATCCCCTGATGTGCTCGTCTGGGGTACGCCTTGTCAGGC--ATTCAGTATCGCG 66663
||| | | || |||||||| ||| | || || || || ||||| ||||| | ||
Sbjct 121 GATCCCAGCGCCGGATGTGCTGGTCGGCGGCACCCCATGCCAGGCCTTTTCAG--TTGCC 64
Query 66664 GGCTTACGTGGTGGGCTTGATGATGAACGCGGCGCGCTAACTTTGAAGTATGTGGAGCTT 66723
|| | || | || || || |||||||| || || | || || |||||||||
Sbjct 63 GGTATGCGCGAAGGCCTCACCGACCCGCGCGGCGCCCTCACCATCAAATACGTGGAGCTT 4
Query 66724 GCA 66726
|||
Sbjct 3 GCA 1
>seq3016640
Length=777
Score = 111 bits (122), Expect = 9e-20
Identities = 132/179 (74%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 71874 ACCGATCTCAATAAGAAGACGGCAGGGCTTCAGCCGTCCGATCTCATCATTGTCGCCGCC 71933
||||| ||| | ||||||| || || |||||||| || | ||||| ||||||| |
Sbjct 539 ACCGACCTCGACGAGAAGACCAGCGGCCTGCAGCCGTCAGACTTGATCATCGTCGCCGGC 480
Query 71934 CGCCCATCTATGGGGAAGACCACGTTTGCGATGAATCTCGTCGAAAATGCCGCAGTTCGT 71993
|| ||||| ||||| || ||||| ||||||||||| ||||| ||||| |||| | ||
Sbjct 479 CGTCCATCCATGGGTAAAACCACCTTTGCGATGAACCTCGTGGAAAACGCCGTGTTGCGC 420
Query 71994 AACGATAAGCCCGTATTGGTTTTTAGCCTTGAGATGCCGAGCCACCAGCTGATGATGCG 72052
| ||| ||| |||| |||| | ||| |||||||| || | |||||| |||||
Sbjct 419 AGCGACAAGACCGTGCTGGTGTACTCCCTCGAGATGCCAGGCGAATCGCTGATCATGCG 361
>seq3085141
Length=3208
Score = 100 bits (110), Expect = 2e-16
Identities = 118/160 (74%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 66426 CTATGGATCTGTTTGCAGTGGAATTGAAGCCGCGAGTATTGCCTGGGAACCGTTGGGTAT 66485
||| || ||||||||| ||| || |||||||||| |||||| | |||||||| ||
Sbjct 169 CTACGGTTCTGTTTGCTCTGGCATCGAAGCCGCGACACAGGCCTGGCACCCGTTGGGCAT 110
Query 66486 GCGTCCGGCGTGGTTTGCTGAAATCGAGCCTTTTCCATCTGCCGTTCTTGCGCACCGCTG 66545
||| | || ||||| ||||| || ||||| || || || || || || || |||| ||
Sbjct 109 GCGCGCCGCCTGGTTCGCTGAGATTGAGCCGTTCCCCTCGGCGGTGCTGGCCCACCACTA 50
Query 66546 GCCCCATGTCGCCAACCTTGGCGACATGACAAAACTTGCC 66585
||| | || | |||| ||||||||||| || || |||
Sbjct 49 CCCCGACGTGCCGAACCACGGCGACATGACCAAGCTGGCC 10
>seq268701
Length=8118
Score = 95.1 bits (104), Expect = 7e-15
Identities = 151/216 (70%), Gaps = 3/216 (1%)
Strand=Plus/Minus
Query 21178 ACAAGCAAACGGGCCAACAGAAAGAGCAAACAGAATGGCATAAAGTCGTTTTGTTCGGAA 21237
||||||| || ||||| || ||| |||| |||||||| || ||||||| |
Sbjct 8118 ACAAGCAGACTGGCCAGAAGGTCGAGAAAACCGAATGGCACCGTGTGTCGATGTTCGGCA 8059
Query 21238 AACTTGCTGAAATTGCGAGTGAGTATTTACGAAAAGGTTCTCAGGTCTACATCGAAGGGA 21297
| | || ||||| || |||| || | || |||||||| ||||| ||||| ||||| |
Sbjct 8058 AGGTGGCAGAAATCGCCGGTGAATACCTGCGCAAAGGTTCGCAGGTTTACATTGAAGGCA 7999
Query 21298 AACTTAAAACCCGTAAGTGGACAGATGACGCCGGTGTAGAACGTTACACGACGGAAATTA 21357
|||| ||||||| ||||| | | |||| | | | |||||||| || |||||
Sbjct 7998 AACTGCAAACCCGCGAGTGGGAAAAAGACGGCA---TCAAGCGTTACACCACCGAAATCG 7942
Query 21358 TCGTCAGCCAGGGCGGCACCATGCAAATGATCGGCG 21393
| ||| | | |||||||||||| || ||||||
Sbjct 7941 TGGTCGACATGCAAGGCACCATGCAACTGCTCGGCG 7906
>seq2262318
Length=133
Score = 91.5 bits (100), Expect = 9e-14
Identities = 101/132 (77%), Gaps = 2/132 (2%)
Strand=Plus/Plus
Query 72352 TGGCGAAGGAATTACAAGTACC-GGTGGTGGCATTGTCACAACTTAATCGATCGCTTGAA 72410
|||| |||||||| ||| | || ||||||||| |||| || || || || || || |||
Sbjct 3 TGGCCAAGGAATT-CAACTGCCCGGTGGTGGCGCTGTCGCAGCTCAACCGTTCCCTGGAA 61
Query 72411 CAGCGTGCGGACAAACGACCGGTAAATTCAGATTTACGTGAATCAGGAGCAATTGAGCAG 72470
|| ||| | |||| || ||||| || || || || |||||||| ||||| || ||||||
Sbjct 62 CAACGTCCCAACAAGCGCCCGGTGAACTCCGACTTGCGTGAATCCGGAGCGATCGAGCAG 121
Query 72471 GACGCAGACCTG 72482
|| || ||| ||
Sbjct 122 GATGCTGACGTG 133
>seq2951953
Length=451
Score = 89.7 bits (98), Expect = 3e-13
Identities = 151/218 (69%), Gaps = 3/218 (1%)
Strand=Plus/Minus
Query 21176 CGACAAGCAAACGGGCCAACAGAAAGAGCAAACAGAATGGCATAAAGTCGTTTTGTTCGG 21235
||||||||| || | | | |||||| |||| || ||||| || ||||||||
Sbjct 400 CGACAAGCAGACCAACGAGCGCAAAGAGAAAACCGAGTGGCACCGCGTGTCGTTGTTCGG 341
Query 21236 AAAACTTGCTGAAATTGCGAGTGAGTATTTACGAAAAGGTTCTCAGGTCTACATCGAAGG 21295
|| |||| || || || ||||||| | || |||||||| |||||||||||||||||
Sbjct 340 CAAGGTTGCAGAGATCGCTGGTGAGTACCTGCGCAAAGGTTCGCAGGTCTACATCGAAGG 281
Query 21296 GAAACTTAAAACCCGTAAGTGGACAGATGACGCCGGTGTAGAACGTTACACGACGGAAAT 21355
|| || ||||||| ||||| || | | ||| | | |||||||| || |||||
Sbjct 280 CAAGCTGCAAACCCGCGAGTGG---GAAAAAGACGGCATCAAGCGTTACACCACTGAAAT 224
Query 21356 TATCGTCAGCCAGGGCGGCACCATGCAAATGATCGGCG 21393
| ||| | | || |||||||| || | ||||
Sbjct 223 CGTAGTCGACATGCAAGGAACCATGCAGTTGCTGGGCG 186
>seq2799564
Length=235
Score = 84.2 bits (92), Expect = 1e-11
Identities = 103/141 (73%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 21177 GACAAGCAAACGGGCCAACAGAAAGAGCAAACAGAATGGCATAAAGTCGTTTTGTTCGGA 21236
|||||||| || ||||| || ||| |||| |||||||| || |||||||
Sbjct 65 GACAAGCAGACCGGCCAGAAGGTCGAGAAAACCGAATGGCACCGCGTGTCGATGTTCGGC 124
Query 21237 AAACTTGCTGAAATTGCGAGTGAGTATTTACGAAAAGGTTCTCAGGTCTACATCGAAGGG 21296
|| |||| || || || | ||||| | || |||||||| ||||| |||||||||||
Sbjct 125 AAGGTTGCAGAGATCGCCGGCGAGTACCTGCGCAAAGGTTCGCAGGTTTACATCGAAGGC 184
Query 21297 AAACTTAAAACCCGTAAGTGG 21317
||||| ||||||| |||||
Sbjct 185 AAACTGCAAACCCGCGAGTGG 205
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 291821054756031
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |