Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_007022.1
Length=172963
Score E
Sequences producing significant alignments: (Bits) Value
seq2910227 89.7 5e-13
>seq2910227
Length=349
Score = 89.7 bits (98), Expect = 5e-13
Identities = 142/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 6985 CAGCAACGCATGGTAAACAGCTTGGTTTGCCTGTGAACCGGAATGGGGTTGAACGTTTGC 7044
||||| || |||| || || ||| ||||| ||||||| || || || ||||| ||
Sbjct 304 CAGCAGGGCCAGGTACACCGCGCTGTTGGCCTGGGAACCGGCGTGCGGCTGGACGTTGGC 245
Query 7045 GAAATTGCAACTAAACAGTTCTTTAGCACGCTCAATTGCCAGGTTCTCGATCTCATCGGC 7104
| ||| | | ||||| ||||| ||||| || || |||| | ||| | | | ||| |
Sbjct 244 GTAATCGGCGCCGAACAGCTCTTTGGCACGGTCGATGGCCAACTGCTCAACCACGTCGAC 185
Query 7105 TTTTACACAACCGCCGTAATACCGTTTGCCTGGATATCCCTCAGCATACTTGTTGGTAAA 7164
| | ||||| ||||| || || ||||| || || || || || ||||||||||| |
Sbjct 184 GTACTCGCAACCACCGTAGTAGCGCTTGCCCGGGTAGCCTTCGGCGTACTTGTTGGTCAG 125
Query 7165 AATAGAACCTTGCGCTTTCATAAC 7188
| || ||||| || | ||| ||
Sbjct 124 CACCGAGCCTTGAGCCTCCATCAC 101
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531990616493880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |