Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09] 3,088,511 sequences; 2,785,377,831 total letters Query= NC_007022.1 Length=172963 Score E Sequences producing significant alignments: (Bits) Value seq2910227 89.7 5e-13 >seq2910227 Length=349 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 6985 CAGCAACGCATGGTAAACAGCTTGGTTTGCCTGTGAACCGGAATGGGGTTGAACGTTTGC 7044 ||||| || |||| || || ||| ||||| ||||||| || || || ||||| || Sbjct 304 CAGCAGGGCCAGGTACACCGCGCTGTTGGCCTGGGAACCGGCGTGCGGCTGGACGTTGGC 245 Query 7045 GAAATTGCAACTAAACAGTTCTTTAGCACGCTCAATTGCCAGGTTCTCGATCTCATCGGC 7104 | ||| | | ||||| ||||| ||||| || || |||| | ||| | | | ||| | Sbjct 244 GTAATCGGCGCCGAACAGCTCTTTGGCACGGTCGATGGCCAACTGCTCAACCACGTCGAC 185 Query 7105 TTTTACACAACCGCCGTAATACCGTTTGCCTGGATATCCCTCAGCATACTTGTTGGTAAA 7164 | | ||||| ||||| || || ||||| || || || || || ||||||||||| | Sbjct 184 GTACTCGCAACCACCGTAGTAGCGCTTGCCCGGGTAGCCTTCGGCGTACTTGTTGGTCAG 125 Query 7165 AATAGAACCTTGCGCTTTCATAAC 7188 | || ||||| || | ||| || Sbjct 124 CACCGAGCCTTGAGCCTCCATCAC 101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531990616493880