Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09] 3,088,511 sequences; 2,785,377,831 total letters Query= NC_007145.2 Length=37639 Score E Sequences producing significant alignments: (Bits) Value seq3088503 484 2e-132 seq3088488 378 2e-100 seq3063309 114 3e-21 seq3053335 95.1 3e-15 >seq3088503 Length=21467 Score = 484 bits (536), Expect = 2e-132 Identities = 1024/1532 (67%), Gaps = 14/1532 (1%) Strand=Plus/Plus Query 2890 CGTCGAGCGCATCGAGGCATCGCTCGAAGTGCGCATGATGGTGTTGATCGCGAAGGAGAA 2949 |||||||||||||| | |||| |||| ||| || || | ||||| ||||| | Sbjct 9938 CGTCGAGCGCATCGGCGGGGCGCTGGAAGCGCGGTTGGTGCAGCTGATCCTCAAGGAAAG 9997 Query 2950 GAAGGACGGTGCGGACTACAAGGAAATCGACCTGCTCGGCCGCCAAGTCGAGCGGCTCGC 3009 ||| ||| | ||||| ||||||||| || ||||| ||||||| | || || | || Sbjct 9998 CAAGAGCGGCGGGGACTTCAAGGAAATTGATCTGCTGCACCGCCAATTGGAACGCCAGGC 10057 Query 3010 GCGCGTGC-GCAAGTACGACGAGACGGGGAAGGAATCGGATCTGAACCCGAAGATTGCGT 3068 | | | || | | | | ||| | ||| | || || ||||| || | || Sbjct 10058 CAGAATTCAGCGCTTTCAGGGCGGCGGT-ACCGAAACCGAGCTCAACCCTAACCTGGCTA 10116 Query 3069 CGCGCAACGCCGGCCCGAAACGCCGTGCGCCCCGTAACGAAATCAGCGACGAACAGCACA 3128 ||||||| || ||||| | || ||||| |||||||| || ||| | Sbjct 10117 AACGCAACGAGGGTCCGAAGAAAAAGACCCCAAAAAACGATATCAGCGAAGAGCAGATCG 10176 Query 3129 AGCGCATCATCGAAGCGTTCCGCGATTCGCTGTT-CGACTATCAGAAAGTCTGGTATCGG 3187 ||| | |||||||| ||| |||||| |||||| ||||||| |||||| ||| Sbjct 10177 AGCTGTTGCGTGAAGCGTTTATCGACG-GCTGTTTCGACTACCAGAAAGACTGGTACCGG 10235 Query 3188 AACGGCGATCAGCGCACGCGCAACATCCTGAAATCGCGGCAGATCGGTGCGACGTGGTAC 3247 ||| |||| || || ||| |||||| ||| ||||||||||| ||||| | ||| Sbjct 10236 GCTGGCAATCAACGGACTCGCGTCATCCTCAAAAGCCGGCAGATCGGCGCGACCTATTAC 10295 Query 3248 TTCGCGCGCGAGGCGCTCGTCGACGCCCTCGACACCGACCGTAATCAAATCTTCCTGTCG 3307 || || ||||||||| | | || || || || |||| || ||||| ||||||||||| Sbjct 10296 TTTGCCCGCGAGGCGTTTCTTGATGCGCTGGAAACCGGGCGCAATCAGATCTTCCTGTCC 10355 Query 3308 GCGAGCAAGGCTCAGGCGCACGTCTTCAAGCAGTACATC-ACGCAGTTCGCGCGCGGGGC 3366 || || || || | | || ||||||| | ||| || || || | || Sbjct 10356 GCATCGAAAAACCAAGCCTATCTGTTTCGCGGGTACATCCAGGCATTT-GCCCGTGAGGT 10414 Query 3367 AGCCGACATCGAGCTCACGGGCGATCCGATTATCTTGCCGAGCGGCGCGACGCTGTACTT 3426 || ||||||| ||||| ||||| || | ||||| | |||||| ||||| || Sbjct 10415 TATCGGTGTCGAGCTGACGGGGGATCCCATCGTATTGCCCAACGGCGCCGAGCTGTTTTT 10474 Query 3427 CCTGGGCACGAACGCGCGCACCGCGCAGTCGTACCACGGCAACTTCTACTTCGACGAATA 3486 ||| || || || ||||| ||||| ||| ||||||||||| |||||||||||||||| Sbjct 10475 CCTCGGTACCAATGCGCGTACCGCCCAGGGCTACCACGGCAATTTCTACTTCGACGAATT 10534 Query 3487 CTTTTGG--GTTCCGAAGTTCCGCGAGCTGAACAAGGTCGCCTCCGGCATGGCGATGCAC 3544 ||| ||| |||| ||||| || |||||||||||||| || |||||||| |||||| Sbjct 10535 CTTCTGGACGTTC--AAGTTTGAGGAACTGAACAAGGTCGCTTCGGGCATGGCCATGCAC 10592 Query 3545 AAGCGCTGGCGCAAGACGTACTTCAGCACGCCGTCCAGCGTCACGCACGAGGCGTACGCG 3604 ||| |||||||| || |||||| |||||||||||| | | || ||||| ||| | Sbjct 10593 AAGAAGTGGCGCAAAACCTACTTCTCGACGCCGTCCAGCATGGCCCATGAGGCCTACACC 10652 Query 3605 TTCTGGAGCGGCGCGCACGCGAACCGCGGCCGCGCCGCGGGCGAGCGCATCCAGATCGAC 3664 ||||||| ||||| || | ||| || | |||| | | || | || ||||| Sbjct 10653 TTCTGGACCGGCGAGCGCTTCAACAAGGGTAAGCCAGCGGCGCAACACACCAAGGTCGAC 10712 Query 3665 ACGAGCCACGAGGCGCTCGTGCGCGGCATGTTGTGCGAGGACGCGCAGTGGCGGCAGATC 3724 ||||| ||||||| | || ||| ||||||||| | ||||||||||||| Sbjct 10713 GTTTCCCACGGGGCGCTCCAACAGGGGCGGTTCTGCGAGGACCGGTTGTGGCGGCAGATC 10772 Query 3725 GTGACCGTGCTCGATGCGATGGCGGGCGGCTGCGACCTGTTCGACATCGACGAGCTGCGC 3784 || ||| | || || || | |||||||| || ||||||||||| || ||| |||| Sbjct 10773 GTCACCATCCTGGACGCAGAGCACGGCGGCTGTGATCTGTTCGACATTGAGGAGTTGCGT 10832 Query 3785 CGCGAGTACAGCGCCGAGGAATTCGCGAATCTGCTCATGTGCCAGTTCATCGACGATTCG 3844 || ||||||||| | |||| ||||| || ||| | ||||| |||| | |||||| | Sbjct 10833 CGGGAGTACAGCCCTGAGGCGTTCGCCAACCTGTTGATGTGTGAGTTTGTTGACGAT--G 10890 Query 3845 CTGTCGG--TGTTCAAGCTGTCGGACCTGCAACGCTGCATGGTCGACTCGTGGGAAGAAT 3902 | | | | || | || || ||||| |||||||||||||| |||| |||| Sbjct 10891 GAGCCAGCATCTTTCCGTTGGCGTTGCTGCAGAGCTGCATGGTCGACAGTTGGGTTGAAT 10950 Query 3903 GGGCGGACGACTTCTCGCNNNNNNNNNNNNNNNCGTTCGGCTATCGCGAGGTGTGGGTCG 3962 |||| || |||| | || ||||||| | || |||| ||| ||| Sbjct 10951 GGGCAGAGGACTACAAGCCATTCGCCATGCGGCCGTTCGGTGACCGTCAGGTATGGATCG 11010 Query 3963 GCTACGATCCGGCGCTCACGGGCGACTCGGCGGGGCTCGNNNNNNNNNNNNNNNNNNNNN 4022 ||||||| || ||| || || || | | ||||| | Sbjct 11011 GCTACGACCCAGCGGAAACCGGTGATTGCTCCGGGCTGGTGGTGGTTGCGCCGCCGCTGG 11070 Query 4023 NNNNNNNNNNNNCCTTCCGCGTGCTCGAACGTCATCAGTTCCGCGGCAACGACTTTGAGG 4082 |||||||| || || || || || ||||| |||| ||||||| || Sbjct 11071 TACCGGGCGGCAAATTCCGCGTCCTGGAGCGGCACCAATTCCGGGGCATGGACTTTGCGG 11130 Query 4083 AACAGGCCGCGGCGATCGAGGCGATCACGCAGCGCTACAACGTCGGCTACATCGCGATCG 4142 ||||| || ||| | || | |||||| || ||| |||| ||| | Sbjct 11131 CCCAGGCGGCATTTATCAAAAACGTCTGCGACCGCTACTGGGTGACCTATATCGGGATTG 11190 Query 4143 ACACCACGGGCATGGGGCAAGGCGTCTACCAGCTCGTGCGCAAGTTCTTCCCGGCCGCCG 4202 | ||| || |||| ||||| ||||| |||||| ||||||||||||| | Sbjct 11191 ATGTCACCGGGCTGGGTAGCGGCGTGGCGCAGCTGGTGCGCCAGTTCTTCCCGGCTGTGA 11250 Query 4203 TCGCGCTGAACTACTCGCCCGAGGTGAAAACCCGCCTCGTGCTCAAGGGCCAGTCCGTCG 4262 | | | | ||| |||||||| || ||||| ||||| ||||| |||| | | ||| Sbjct 11251 CCACCTTCAGCTATTCGCCCGAAGTCAAAACACGCCTGGTGCTGAAGGCCTATGACGTGA 11310 Query 4263 TCCGGAACGGCCGCCTGCAATTCGACGCGGGCTGGACCGATCTGGCGGCGGCGTTCATGG 4322 ||| |||||||| ||| | |||||||| || |||||||| ||||| | || | |||| Sbjct 11311 TCCATAACGGCCGGCTGGAGTTCGACGCCGGGTGGACCGACATGGCGCAGTCGATGATGG 11370 Query 4323 CGATCAAACAGACGATGACGGCGAGCGGCCGTCAGGCGACCTACACCGCCGGCCGCACCG 4382 ||||| ||||| | || || |||| || ||| ||||||||||| || |||| || Sbjct 11371 CGATCCGCAAGACGGTCACCGCAGGCGGTCGCCAGTACACCTACACCGCAGGGCGCAACG 11430 Query 4383 ACGAGACGGGCCACGCCGACCTGGCGTGGGCG 4414 || | || ||||| ||||||||||| |||||| Sbjct 11431 ACAACACCGGCCATGCCGACCTGGCCTGGGCG 11462 Score = 302 bits (334), Expect = 1e-77 Identities = 515/726 (71%), Gaps = 22/726 (3%) Strand=Plus/Plus Query 733 GCCAGTTCGATGTTTTCGGCCACGCAGCCGCAGCCGAAGTCTTCGACCACGTAGGCGTCG 792 ||||||||||||||||| || | || | || | | |||||| | ||||| ||||| Sbjct 7747 GCCAGTTCGATGTTTTCAGCGAGCGAGGCACATTCCAGGTCTTCAATGACGTATGCGTCA 7806 Query 793 TTCGACGATTCGTAGTTCTCGATGCGGTCGCGTTCCGGCACTTCCTTCAGCG-TGCGCCG 851 || ||| |||||||| ||||||||||| || | |||| | | | || |||| || Sbjct 7807 TTGACCGACTCGTAGTTTTCGATGCGGTCACGCTT-GGCATTGTCGACGACGGTGCGGCG 7865 Query 852 GCGCGCGCCTTCCTGGTAGTAGATCGACAGATTTGACAGCTTCGTGACCATCAGCGCGCG 911 ||| ||||||||| ||||||||||||| ||| |||||| ||||||| || | |||| Sbjct 7866 GCGGCTGCCTTCCTGCCAGTAGATCGACAGGTTTTCCAGCTTGGTGACCAGCAACCCGCG 7925 Query 912 CTTCGGGAAGAACGGCACGCGCACGGCCGGCAGATTGCCGATGCGCTTCTGGCTCACGAT 971 | ||||||| | |||||||||||||| |||| |||||| | |||||| || || || Sbjct 7926 CGGCGGGAAGTAAGGCACGCGCACGGCTGGCAAATTGCCCAAGCGCTTTTGACTGGTGAC 7985 Query 972 CAGATCGGCCGCGAGCCGCTCGGTCGGCGCCTGCGTC-GCGTTGACGATCGGGAAATACT 1030 | |||||| || ||| || |||||||| | ||| ||||| |||||||||||||| Sbjct 7986 GATATCGGCGGCCAGCATTTCAGTCGGCGCGT-TGTCTTTGTTGATGATCGGGAAATACT 8044 Query 1031 TGTCGTGCAGCAGCTCGCGGCCGCAGATCACGACGAGGCCCGTGTCTTCCTGGAACCACG 1090 ||||| |||||| | ||| ||||||||||| || || | | |||||||||| |||||| Sbjct 8045 TGTCGGCCAGCAGTTGGCGACCGCAGATCACCACCAGATCAGGGTCTTCCTGGTACCACG 8104 Query 1091 GGTCGATCATCGACGACACGATATCCATCACGAGCGCGTCGAGGTTCTCGTAATC--GCC 1148 | | || | | ||| || | || || ||||||||||| | | || | Sbjct 8105 GCGCAATGAACTCTTCCACCATGCTGAATACCAGGGCGTCGAGGTTGGTGAAGTCTTTAC 8164 Query 1149 CGCCTTGCCGACGAGCACCTTGCCGGCCTGCTTCG-CGCCTTCGTGCAGCACGC--GCTG 1205 || | |||| | | ||||||| ||||| | |||| | || |||| || | Sbjct 8165 CGGC--ACCGATGGTGATTTTGCCGG-AGCCTTCGACCACTTCCTTCATGACGCGGGCGG 8221 Query 1206 CGCTGCGCGCTCGCGGTACTGTTGCAGCCAGCCGATGTTCACGTCCTGCAACAGCGGGTT 1265 || | || |||| || |||||||| || ||||| |||||||| || || || Sbjct 8222 CG-TTTTCG-GCGCGCATCTTCTGCAGCCAACCAATGTTGACGTCCTGGCGAAGTGGATT 8279 Query 1266 --TGCCTGACGGTCGGTCGTCGCGGC-CGCCTTCACGCCGTTCCAGCCGATCATGATGCG 1322 || ||| ||| || ||||||||| || | | ||||||||||| ||||||| |||||| Sbjct 8280 GGTGGCTG--GGTTGGACGTCGCGGCGCGAC-TGACGCCGTTCCAACCGATCAGGATGCG 8336 Query 1323 ATCGAGCGCCCCCTGGTTGAGGATCACGTCGCGGATGCGCTGCTGGAAGTCGGCGAACTT 1382 || |||||| | || ||||| |||| || || || ||||||||||| |||||| Sbjct 8337 GTCCAGCGCCTGGCGTTTCAGGATGGCGTCACGAATACGGGCCTGGAAGTCGGGGAACTT 8396 Query 1383 CGCCCACATGTCGAGCTTGC-GATACGGAATCGCCGTGTCGTAGTCGGTCTTCTCGCAGC 1441 |||||| || | ||||| | ||||| | || ||| ||| ||||| | |||| Sbjct 8397 GGCCCACGCATCCAACTTGCTGTAACGGAGGTG-GGTATCGAAGTTGGTCTGCGAGCAGA 8455 Query 1442 GGTAGC 1447 ||||| Sbjct 8456 AGTAGC 8461 Score = 208 bits (230), Expect = 2e-49 Identities = 313/442 (71%), Gaps = 2/442 (0%) Strand=Plus/Plus Query 4939 GTGAACGGCTGGCAGGAGCGGCACGAGTTCGAGCCCGACAGCGTGTTCCAGCT-CGTGCG 4997 ||| | |||||| |||| ||| |||| ||||| | || | || || || || | Sbjct 11963 GTGCAAGGCTGGAAGGATGAACACCAGTTTGAGCCGGGAAGTATTTTTCATCTGCGAGAA 12022 Query 4998 GCCGGACATCAATCAGGAGGTCTACGGCCTGCCCGAGTATCTGAGCTCGCTGCACTCGGC 5057 || ||| | | |||||| | || ||| |||| |||| | || | |||| ||||| Sbjct 12023 GC-GGATTTGCACCAGGAGATTTATGGCTTGCCGGAGTGGATTAGTGCCTTGCAGTCGGC 12081 Query 5058 CTGGCTGAACGAATCGTCGACGCTGTTCCGGCGCAAGTATTACGAGAACGGCAGCCACGC 5117 | ||| ||||||||| | ||| ||||||| |||||||| |||||||| ||||| ||||| Sbjct 12082 GTTGCTCAACGAATCGGCCACGTTGTTCCGCCGCAAGTACTACGAGAATGGCAGTCACGC 12141 Query 5118 CGGCTTCATCCTGTACATGACCGACGCCGCGCAGAAGCAGGACGACGTGGACAACATGCG 5177 ||||||||| || ||||||||||| ||||| |||| | ||| | ||| |||| Sbjct 12142 CGGCTTCATTCTCTACATGACCGATGCCGCACAGACTGAAACCGATATCGACGCTTTGCG 12201 Query 5178 CGACGCGCTGAAGAACGCGAAGGGGCCTGGCAACTTCCGCAACGTGTTCATGTACGCGCC 5237 | | || || ||| || | |||||||| ||||| || |||||| |||| |||| |||| Sbjct 12202 CAAGGCTCTCAAGGACTCCAAGGGGCCAGGCAATTTTCGCAACTTGTTTGTGTATTCGCC 12261 Query 5238 GGGCGGGAAGAAGGACGGCATCCAGCTCATCCCCGTGTCCGAGGTCGCCGCGAAGGACGA 5297 ||| ||||||||||| || ||||| ||||| || ||||| || || ||||| || Sbjct 12262 CACCGGCAAGAAGGACGGGATACAGCTGATCCCGGTCAGTGAGGTGGCGGCCAAGGATGA 12321 Query 5298 GTTCTTCAACATCAAGAACGTGACGCGCGATGACCTGCTCGCCGCGCACCGCGTGCCGCC 5357 ||| | ||||| ||| || || || || |||| ||| || | || || Sbjct 12322 ATTCAACTCGATCAAAAACCAAACCCGTGACGATGTGCTAGCCAGCTTGCGTATTCCACC 12381 Query 5358 GCAGTTGCTTGGCATCGTGCCG 5379 |||| || | ||||| |||||| Sbjct 12382 GCAGCTGATGGGCATTGTGCCG 12403 Score = 91.5 bits (100), Expect = 3e-14 Identities = 88/112 (79%), Gaps = 6/112 (5%) Strand=Plus/Plus Query 36718 CGGCAGCACCACGCCGAGCTCGGCGAGGCCGGGGTTCGCTTCGAGCACGGCTTC---AAC 36774 |||||| | | |||| | ||||| ||||||||||| ||||| |||||||| || ||| Sbjct 6331 CGGCAGGATCGGGCCGTGGTCGGCCAGGCCGGGGTTGGCTTCAAGCACGGCCTCGGTAAC 6390 Query 36775 CGTGCCCGCCGTGCTGCCGTAGTGCCTCCAGCACAGCGCGTCGAGCGTCTCG 36826 ||| || |||| ||||||||||| |||||| |||||||||| || ||| Sbjct 6391 ---GCCGGCAGTGCGGCCGTAGTGCCGCCAGCAAAGCGCGTCGACGGTGTCG 6439 Score = 87.8 bits (96), Expect = 4e-13 Identities = 234/352 (66%), Gaps = 12/352 (3%) Strand=Plus/Plus Query 35238 TACGCGCGGTCGAGCTTCACGTCATACAGGTTGATCGCGAAT--TCCGGGCCGTTGTAGC 35295 || ||||| | |||||| ||| || || || |||| || ||||| ||||||||| Sbjct 4799 TAGGCGCGCTGGAGCTTGGTGTCGTAGAGATT--TCGCAGATAGTCCGGCCCGTTGTAGA 4856 Query 35296 CTTCCGCGAACGCTGCCCACTTCCGGGCACGAAGCGCCGCTAGCAGCTTCTTGTCGGCCG 35355 | |||||| ||||| || |||| || ||| ||||| | ||||| Sbjct 4857 GCTTGGCGAACTGAGCCCATTTGCGGGTTTTCAGGGCCTTGTGCAGCACCGGGTCGGTTT 4916 Query 35356 CGACGTACCGCACGAACGCGTCGAGGTGCTCGGCTTCGCCCA-GCTCCATACGGGACACG 35414 ||| | | || ||| || ||||| || | | ||| || |||| | | | ||| Sbjct 4917 CGATGAAGCGGGTGAAGGCCTCGAGCTGTTGCGATTCACCGGCGCTCATTGCCGC-CACA 4975 Query 35415 AATTCGTCGACGCTCGCGTAACCCAGGCGTTTCCAGTGATACGCCATGATCTGGAACGCG 35474 ||||| | ||||| | ||| || || || ||||| ||| | |||| |||||||| ||| Sbjct 4976 AATTCCTGCACGCTTGTGTATCCGAGACGATTCCAATGAAAGCCCATAATCTGGAAAGCG 5035 Query 35475 CCCCAGCTCGCGGACTCGTAAGCGGATGCCGCGTCGAT---GCGCGCCGCAGTGTCGAGC 35531 |||||| || ||||| | |||| | | ||||| ||| ||| || | || Sbjct 5036 CCCCAGGAAGCCGACTCCAAGGCGGCGGTGTCATCGATCAGGCGGGCCATAG---CTAGT 5092 Query 35532 CGCACGTATTCGGCGGCGCCGCCCTGGTAGCCGCCGCGCTTCGGGTTGACGA 35583 || || |||||||| |||||| ||| || ||| | ||||||||||||| Sbjct 5093 CGTTGGTGTTCGGCGGTGCCGCCGATGTATCCACCGGGTTTCGGGTTGACGA 5144 >seq3088488 Length=17142 Score = 378 bits (418), Expect = 2e-100 Identities = 1474/2281 (65%), Gaps = 131/2281 (6%) Strand=Plus/Plus Query 24192 CTACGTATCCGGGCGCGCTCGCGCCAGTCCATCAATTCGGCCAGGGAGAAGGCGGCCATA 24251 || |||| || |||||| |||||||||||||||| || |||| || ||||| Sbjct 14392 CTCCGTACCCTGGCGCGTTCGCGCCAGTCCATCAGGTCTTGCAGGCCCAACTGATCCATA 14451 Query 24252 TCGCGCGGCGTCCAGCCAAACACCGTCGCGATATCGGCCATCGCGTCTTCTACGCGGGCC 24311 || ||| | |||| ||| ||| || | ||||||||| ||||| |||||||| Sbjct 14452 TCAGCCGGTGCCCAGTGAAAAACCACAGCCAGATCGGCCATGGCGTCCTCTACGCGACGA 14511 Query 24312 GGGATTCCATGCTCGCTTTCAGCGCCTTCGGCATCAAAAAACCGGCGAAGATACCCCCCA 24371 ||||| | || | | ||| || |||| ||| ||||||||||| || | | | || Sbjct 14512 GGGATGC-ATCC--GTCTTCGCCGACTTCTGCAACAAAAAACCGGAGATTTTGCTGCTCA 14568 Query 24372 ACGCCACGAGGTCGGCCGGGTCCATGCCGGCCACGTCGAACTCGGTCAGCGTCGGCGTGC 24431 |||| ||||||||||||||||||||||| || |||| |||| || | ||||||| Sbjct 14569 GGGCCAGTAGGTCGGCCGGGTCCATGCCGGCGACTTCGACGACGGTGAGGCTTGGCGTGC 14628 Query 24432 TGATGCGCGGCAACACCTTGCGCAGCGCGTCGACATCGAGATTCACGAGTGCGGCGAGCG 24491 |||| ||||||| |||||| ||| | ||||||| | | || || | | || Sbjct 14629 TGATACGCGGCAGAACCTTGATCAGGCTGGCGACATCCATCTGCAGCAGCTCTACCAGGC 14688 Query 24492 ACGTGCCGCGCAGCGCGCCCGCGGCTGGCTTGCGCAACGTCAC-CTGCGTAATGGTC-TG 24549 | |||||| | | |||| | | |||||||||| || | ||| | ||| | || Sbjct 14689 TCACGCCGCGTAACTCGCCGGAGTTGGGCTTGCGCAGTGTGATGCTGT-TGATGCTGGTG 14747 Query 24550 CCCTTCGCGCTCGATCGGTGTGTCGAGCGTGTGCGTGTTCTCGTCGGGC-GCGGCGTGGC 24608 | |||| ||||||||| ||||| || ||||||||||||| | || || || Sbjct 14748 GTCC-CGCGACGGATCGGTGTATCGAGAATGACGGTGTTCTCGTCGGCCAGCTGCT--GC 14804 Query 24609 CCGTC--GTT--TCGATGTGAGCGGTATCGATGG---TCG-TCATGGTGTTTCCTGGGTT 24660 |||| ||| ||| || || | | || | ||| || ||||| || |||| Sbjct 14805 ACGTCAGGTTGTTCGGTGGTTTCGTTCTTCATTGGATTCGCTCCTGGTGATTAAAGGGT- 14863 Query 24661 GGATGTGAAATTGGACTGGCCCGCGCTCGACGCGGGCGTCGATTACAGGCCCATCGCGCG 24720 |||| || || |||| | | ||| | | | | |||||| || Sbjct 14864 -GATG----AT------------CGATCGAGG-GTGCG--GGTCAGATGCCCATGCCGTT 14903 Query 24721 GCGAAGGTCCGACGCGAGGTCCATGCCGTTGATCTTCTCGACCGCGTTCACGAAGTCGAG 24780 ||| | | | | | ||||| ||||||| ||||||||| ||| | | |||| Sbjct 14904 GCGGTGCTTCTCCAGCATGTCCACACCGTTGACCTTCTCGACAAAGTTGAGCAGATCGAT 14963 Query 24781 CTCGATGAGGTCGCGCCCGTTCACGGTCAGCTTGTAGTAGCTGGCGTTGGTCGTGATCTT 24840 |||||||| || || | ||||||||||||||||||||| | |||| || || Sbjct 14964 CTCGATGATTTCTTCGCCATCTACGGTCAGCTTGTAGTAGCTGCAGGTGGTGGTCATGGA 15023 Query 24841 GAATTTAGTGTCTTCCTTCGCCTTCGCGGTGCCCATGTCGATCTCTTCGTGGCGGCCCTT 24900 | || |||||| || | || || |||||| ||||| |||||| ||||| Sbjct 15024 GTGTTCAGTGTCCTCGCCGGGCTGGGCATCGCCCATCTCGATGGTTTCGTGACGGCCACG 15083 Query 24901 CACTACCACTTCGATCTGGTCGTGCTTCT--TGCTGTCCTCGCGACGATAGCCGCCGGCG 24958 ||| |||||||| | | | | |||| || |||| || | | || ||| | | Sbjct 15084 CACAACCACTTCCACATTGCTGA-CTTCGCCTG-TGTCGTCTTGCTGGTAAGGGCCAGAG 15141 Query 24959 AAGCGCAGCAGCACGCCGTCGTGCTGTACGGCGCCGTACTGTTCGAGC-ACTTC-GACCA 25016 || ||||| ||| | | | | || |||||| |||| || | || || | Sbjct 15142 AATCGCAGGGCCACACTGGAGGCGTTGACCGCGCCGAACTGACGCAGAGAGATCAGATC- 15200 Query 25017 TGAAGCCGCCGCACGTCCACTCGAGCTGGA-GC--TCTTCGC---TGCCGTAGTCGATTT 25070 || ||| ||| | |||| |||| ||||| || || ||| |||| ||| || Sbjct 15201 -GAGGCCACCGGTCTTCCATTCGAACTGGATGCCGTCGTCGGACATGCCCAGGTCAGCTT 15259 Query 25071 TCACGGGGCCGGTCATGCCGCTGCCCTGCCACGCTTCCATCTTGCGCTTGAGCTTCGGAA 25130 | || ||||| ||||||||| ||| | |||||||||||||||| ||| || | Sbjct 15260 TGACCGGGCCATTCATGCCGCCGCCGCGATACGCTTCCATCTTGCGGCCGAGGGAGGGCA 15319 Query 25131 GATTGAGCTCTTCGACTTCGCCCA--CGA---AGTTCGCGCCGTTGTGAAAGACGTTGAA 25185 | |||| |||||| || | ||| || | ||||| | || | ||||| Sbjct 15320 GGGTGAGG-----GACTTCACCAAGCCGAGATAGCTGTTGCCGTCATTGAACAGGTTGAG 15374 Query 25186 GCCCTTCAGTTTTCGAGGCATACCCATTGCATTTGACTCC--------TGTT-------A 25230 | || || || |||||||| |||| || | |||| |||| | Sbjct 15375 GTTTTTGAGCTTGCGAGGCATTGCCATGGCGGTGTTCTCCGGGATACGTGTTCAGGGTGA 15434 Query 25231 GCCCGCCACGCGCG-----CCGG----------------------GAAATCGGCGAGGAA 25263 | | || |||| | |||| ||| ||| ||| | Sbjct 15435 ACTCCCCTCGCGGGGAGACCCGGTTTAGCTGCTGATGCCCTTGGCGAAGTCGATCAGGTA 15494 Query 25264 GCGGTCGGTGATGCGCTGGCGCAGCACCAGATTTTCGAGAGGCGGAACCGGCGTGTAGTC 25323 ||||||||||| |||||||| | || | ||| || ||||| || || |||||||| Sbjct 15495 ACGGTCGGTGATTCGCTGGCGGAAGGTGAGGTCTTCAAGTGGCGGCACGGGGGTGTAGTC 15554 Query 25324 GTAATCGATGTACGCCTTGCCGGACGCGAGAATGTCGGCCGTGTTC--GGC-TCCGGATC 25380 |||||| | | |||||||| | ||| |||| ||||| | | ||||| | Sbjct 15555 GTAATCAAGCCAGAGCTTGCCGGCCTTGAGGGTGTCTTTGGTGTTGATGTCGTCCGGGT- 15613 Query 25381 GATCCACGCGCTACCGCCGATCAGGTAGCCGTTCGCGACCTGCTGCCGAAACCAGCCGTT 25440 |||| || ||||||||||||||||| | | | || || | | | || | Sbjct 15614 --TCCAGCAACTGCCGCCGATCAGGTAGCCCTGGGATTTCAACTCGCGCATCTTGGCGCT 15671 Query 25441 GATGCTTTCCACGATGTCGCGCGCGAGCGACGGATTCAGCGGGCCGTCGACGACGGGCAT 25500 | || ||| || | |||||| | || || | | || |||| ||| || | ||| Sbjct 15672 TACGCCTTCGACCAGGTCGCGTACCAGGGAGGCGTGCATAGGGCGGTCAACTGCCCACAT 15731 Query 25501 CTGCGCTTCGGCGATCGAATCGCCGGCCACCTGAGCGGTGCGCGTGTAGTTCTCGAACGC 25560 ||||||||| | || | || || | ||| |||||||| |||||||| ||||| || Sbjct 15732 GTGCGCTTCGCCCATGGTGTCCGCGAGGATCTGCGCGGTGCGGGTGTAGTTTTCGAAGGC 15791 Query 25561 GAACTTCGGATCGTCCGAGCACGTGCGCTCGCCCCAGAACCGGAAGCCGTTGCGGTTCAC 25620 |||| ||| || || ||| ||||| |||||||| || || |||||| ||| | Sbjct 15792 GAACAACGGGTCATCACTGCAGGTGCGGCTACCCCAGAAGCGAAAACCGTTGGCGTTGAT 15851 Query 25621 GAGCGTCGTCACTTCGT-GCTCGTTCAGGTAGCCCGCATCGGTCGCCGGGTCCTGCAAAT 25679 || || || || |||| ||| ||| |||||| || ||||| || |||| |||| || Sbjct 15852 CAGGGTGGTGACGTCGTTGCT-GTTGAGGTAGTTGGCGTCGGTGGCTGGGTTTTGCAGAT 15910 Query 25680 CCCACGACACGTCGGCGCTGATGCCGGACACGCCGTTCACGACGACATTCGAAATCGTCT 25739 |||| |||||||||||||||| |||| |||||| ||||| | || || || | || | Sbjct 15911 CCCAGAACACGTCGGCGCTGATACCGGTCACGCCACTCACGGCCACGTTGGACAGGGTTT 15970 Query 25740 TGTGCCAGCCGATGTCGTTGTCGATCTTCGCGCGCAAGCCGGCGGCGATCGCCGGCGCCG 25799 | ||||| || | || | ||||||||| ||||| | |||| |||| ||| |||| Sbjct 15971 TATGCCAACCCGTCTCTTGGTCGATCTTGGCGCGAAGGCCGAGGGCGCGGGCCACGGCCG 16030 Query 25800 GGATGACAGCCGTCGAGTTCGTCGTGTCGTCCCAGCCGAGCCAGTCCGGCCAGATCACCA 25859 | || ||| ||| || ||||||| || |||||||||| ||||||| Sbjct 16031 AAGCGCTGGCGGTCTTGTTGGTGACAGTGTCCCAGTTCAGGAAGTCCGGCCAAATCACCA 16090 Query 25860 TGATTTCGCGTTGGCCGAACTGCTTGCGGTACGCGGCGGCTTCTTCCTTCGTTTTGCAG- 25918 | |||||||| ||||| | || ||||||||| | | |||||||| ||||||||| Sbjct 16091 TCATTTCGCGGGCACCGAAGTTCTCGCGGTACGCCACTACCTCTTCCTTGGTTTTGCAGT 16150 Query 25919 -CCGGACGCCGACACATAGGCCATCGCGCGCAGCGACTGCGCGGTCGCCGCGAGCGCGGC 25977 || | ||| || || || | |||||||| | ||| | || |||| |||| Sbjct 16151 TCCAGGCGC--TTACGTATGCAAAGGCGCGCAGGTCTTTGGCGATGGCGCCGAGGGCGGT 16208 Query 25978 CGCCACCGGCTGCGTATCGAGGCCGGGCGCCGCGAGAATGCGCGGCTTCACGCCGA-GCG 26036 || || ||| | |||||||| ||| | | || || ||||| ||| ||| | ||| Sbjct 16209 GGCTACTGGCAAACTGTCGAGGCCTGGCACGCCAAGGATACGCGGAGTCATGCCCACGCG 16268 Query 26037 CACCCTGCGCGGCGAGCAGCGCCTTGATGCCCGTGTACTTGCCGTCCGGCGTCACGGTGC 26096 || || |||||||| || || ||||| ||||| | ||| || || || Sbjct 16269 TGATTTG-GCTGCGAGCAGAGCTTTCATGCCGGTGTATTGACCGGTTGGTGTTGTACCGC 16327 Query 26097 CGAT---GACGTTCGAGGTCGTCTCGTCGGCGTCCTTGCCTTCGGCGACGCGCACGACG- 26152 | || | || ||| |||||| | | |||| |||||| ||| || || ||| Sbjct 16328 CAATCAGGGCGCTCGTAGTCGTCGCTT---CGTCAGCGCCTTCTTTGACCCGTACCACGA 16384 Query 26153 -ACGGTCAGCGGCTTCGTCTGCTTGCCGATCGCGT-CGAGCGTGCGGCGCAGCGTGCCTT 26210 | || | ||||| ||||| | | |||| | | | || || || ||| ||||| | Sbjct 16385 TAACGTAA--GGCTTGGTCTGGTCGGCGATGCCTTGCAGGCTGGCAGC-CAGGGTGCCCT 16441 Query 26211 TCTTGCCGGCCTTGCCGAGCGCCGCGACGACGTTCGTCAGCAGCACGGGCGTATTGAGCG 26270 | |||||||||||||| || | ||||| || | || || || || | || | Sbjct 16442 TGACGCCGGCCTTGCCGACGGCGGTTTGCACGTTGGTGATGAGGACTGGAGTGTCCAGAG 16501 Query 26271 GAAACGCGCTCGCGTCAGCGTCGGCCGCCGTGCAGACGACGCCGAGCACGGCCGTCGACA 26330 | || || | ||| || || | || ||||| || | ||||| || || || | | Sbjct 16502 GGAAAACGAGTGGGTCCGCATCTTCAGCGGTGCAAACCATGCCGATGACTGCGGTGGGAA 16561 Query 26331 CTGAGCGAATCGGGCGGCCGCCTTCGTTGATTTCGATGACGCGTACGCCGTGGTGGTAAT 26390 | |||||| |||||| ||| ||||||| ||||||||| || ||||||||| | |||| Sbjct 16562 TAGTGCGAATGGGGCGGGTGCCGTCGTTGAGTTCGATGACCCGCACGCCGTGGAGATAAT 16621 Query 26391 C 26391 | Sbjct 16622 C 16622 >seq3063309 Length=1409 Score = 114 bits (126), Expect = 3e-21 Identities = 420/648 (65%), Gaps = 30/648 (5%) Strand=Plus/Plus Query 3206 CGCAACATCCTGAAATCGCGGCAGATCGGTGCGACGTGGTACTTCGCGCGCGAGGCGCTC 3265 ||||||||||||||| || ||| | || ||||| |||||||| |||| ||| || Sbjct 3 CGCAACATCCTGAAAAGCCGCCAGGTGGGCCTGACGTACTACTTCGCCGGCGAAGCGTTC 62 Query 3266 GTCGACGCCCTCGACACCGACCGTAATCAAATCTTCCTGTCGGCGAGCAAGGCTCAGGCG 3325 | |||||| | |||| | || || | ||||||||||| ||| | ||| || Sbjct 63 ATGGACGCCGTGCTGACCGGCGACAACCAGGTGTTCCTGTCGGCCAGCCGCTCGCAGTCG 122 Query 3326 CACGTCTTCAAGCAG-TACATCACGCAGTTCGC-GCGCGGGGCAGCCGACATCGAGCTCA 3383 | | ||| |||| ||||||| ||||| || || | | |||||||||||| | Sbjct 123 GAAATTTTC-CGCAGTTACATCATCCAGTTTGCAAAGCAGTG-GTTCGACATCGAGCTGA 180 Query 3384 CGGGCGATCCGATTATCTTGCCGAGCGGCGCGACGCTGTACTTCCTGGGCACGAACGCGC 3443 | ||| | ||||| | | | |||||| |||| ||| || || || Sbjct 181 CCGGCAACCCGATCACGCTCAGCAACGGCGCCGAGCTGCGTTTCTTGTCGACCAATAGCA 240 Query 3444 GCACCGCGCAGTCGTACCACGGCAACTTCTACTTCGACGAATACTTTTGGGTTCCGAAGT 3503 ||||||| ||| ||||| ||| || ||||| |||| || || |||||| | | | | Sbjct 241 GCACCGCCCAGGGCTACCATGGCCACGTCTACGTCGATGAGTATTTTTGGATACGTGACT 300 Query 3504 TCCGCGAGCTGAACAAGGTCGCCTCCGGCATGGCGATGCACAAGCGCTGGCGCAAGACGT 3563 || | | || | || || ||| | ||||| | |||||| |||||||| || | Sbjct 301 TCGACAAACTCAGCACCGTGGCCAGTGCCATGGGCACCCACAAGAAGTGGCGCAAAACCT 360 Query 3564 ACTTCAGCACGCCGTCCAGC---GTCACGCACGAGGCGTACGCGTTCTGGAGCGGCGCGC 3620 |||| || || ||||| ||| ||||| | |||||| |||||||| |||| | Sbjct 361 ACTT---TTCGACGCCCAGCGCAGTCTCGCACCAAGCGTACCCGTTCTGGTCGGGCGAGG 417 Query 3621 A----CGCGAACCGCGGCCGCGCC--GCGGGCGAGCGCATCCAGATCGACACGAGCCACG 3674 | ||| ||| || |||| | | ||| ||| || | | || || Sbjct 418 AATTCCGC-AACAGCAAGCGCGGCAAGAAGGCCGGCGGCACCTGGCCCAC--------CG 468 Query 3675 AGGCGCTCGTGCGC----GGCATGTTGTGCGAGGACGCGCAGTGGCGGCAGATCGTGACC 3730 ||||| || | | | ||| |||||| |||| || ||||| | | | | ||| Sbjct 469 AGGCG-TCATACACCCAGGGCGCATTGTGCCCCGACGGCCAATGGCGCAAAACCATCACC 527 Query 3731 GTGCTCGATGCGATGGCGGGCGGCTGCGACCTGTTCGACATCGACGAGCTGCGCCGCGAG 3790 || ||| || || || ||||||||||| ||||||||| |||| | |||| | ||| Sbjct 528 CTGGACGACGCCATAGCCGGCGGCTGCGATCTGTTCGACCTCGAGCAACTGCAGCTGGAG 587 Query 3791 TACAGCGCCGAGGAATTCGCGAATCTGCTCATGTGCCAGTTCATCGAC 3838 ||| || || ||||| | | ||| || ||| ||||||||||| Sbjct 588 TACGACGAAGACAAATTCCAGCAGCTGTTCTACTGCAAGTTCATCGAC 635 >seq3053335 Length=1201 Score = 95.1 bits (104), Expect = 3e-15 Identities = 311/474 (66%), Gaps = 17/474 (4%) Strand=Plus/Minus Query 1119 CACGAGCGCGTCGAGGTTCTCGTAATCGCCCGCCTTGCCGACGAGC---ACCTTGCCGGC 1175 ||| || || || ||||| |||||||||| ||| | || ||||| |||||||| || Sbjct 484 CACCAGGGCATCAAGGTTGGCGTAATCGCC-GCC--GGCGCCGAGCGTGACCTTGCCAGC 428 Query 1176 CTGCTTCGCGCCTTCGTGCAGCACGCGCTGCGCTGCGCGCTCGCGGTACTGTTGCAGCCA 1235 | | ||||| || | |||||| |||||| || | ||||| | || |||||||| Sbjct 427 GT---TGGCGCCCTCTTTCAGCACCTGCTGCGGGGCCTGTTCGCGCAATTGCTGCAGCCA 371 Query 1236 GCCGATGTTCACGTCCTGCAACAGCGGGTTTGCCTGACGGTCGGTCGTCGCGGCCGCCTT 1295 ||| ||||||||||||||| | || | || ||||||| || |||||| | Sbjct 370 GCCCTTGTTCACGTCCTGCAGCTTGGGAAATTTCTCCAAGTCGGTCTGCGTGGCCGCATG 311 Query 1296 CACGCCGTTCCAGCCGATCATGATGCGATCGAGCGCCCCCTGGTTGAGGATCACGTC-GC 1354 ||||| | ||||| | ||| || || |||| | || | |||| | || Sbjct 310 AGTGCCGTGGAAACCGATAACGATTCGGTCCTGCGCGATGCGCTTTTG---CACGGCGGC 254 Query 1355 GGA--TGCGCTGCTGGAAGTCGGCGAACTTCGCCCACATGTCGAGCTTGCGATACGGAAT 1412 ||| ||| | | |||||||| ||||||||||| |||| |||| || |||| Sbjct 253 GGAATAGCGATCTTTGAAGTCGGGAAACTTCGCCCAGGCATCGATCTTGGCGTATGGAAG 194 Query 1413 CGCCGTGTCGTAGTCGGTCTTCTCGCAG-CGGTAGCGGTTGCTGTCGAGCGCCGTCGGGT 1471 || ||| | | ||| || ||| ||| || || |||| ||||||| | || Sbjct 193 GCCCACGTCCGACTGGGT-ATCAGCCAGTTCGTATTGGGTGTTGTCCAGCGCCGAAGCGT 135 Query 1472 CGATCGGTTGGCGCGCGGCCTTCGTCGTGTCGGTGCGGCTCGCGATCGGGCCGGACACGG 1531 | | | || || ||| || | |||| |||||||| | || |||||| ||| Sbjct 134 CCTTGGCTTCTCGATCGGTGGTCTTGGTGTTGGTGCGGCCAGTGACTGGGCCGTTCACAC 75 Query 1532 ACAGGCCGAGCTTTTCGCCTTCGAGCTCGGTCACGGGCAGCACGTTGATGCGCT 1585 | | || |||||| || | || ||| |||| || | |||||||| |||| Sbjct 74 CGATGAAGACCTTTTCACCCTTGATCTCACTCACCGGAACGACGTTGATACGCT 21 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 115910218119782