Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_007145.2
Length=37639
Score E
Sequences producing significant alignments: (Bits) Value
seq3088503 484 2e-132
seq3088488 378 2e-100
seq3063309 114 3e-21
seq3053335 95.1 3e-15
>seq3088503
Length=21467
Score = 484 bits (536), Expect = 2e-132
Identities = 1024/1532 (67%), Gaps = 14/1532 (1%)
Strand=Plus/Plus
Query 2890 CGTCGAGCGCATCGAGGCATCGCTCGAAGTGCGCATGATGGTGTTGATCGCGAAGGAGAA 2949
|||||||||||||| | |||| |||| ||| || || | ||||| ||||| |
Sbjct 9938 CGTCGAGCGCATCGGCGGGGCGCTGGAAGCGCGGTTGGTGCAGCTGATCCTCAAGGAAAG 9997
Query 2950 GAAGGACGGTGCGGACTACAAGGAAATCGACCTGCTCGGCCGCCAAGTCGAGCGGCTCGC 3009
||| ||| | ||||| ||||||||| || ||||| ||||||| | || || | ||
Sbjct 9998 CAAGAGCGGCGGGGACTTCAAGGAAATTGATCTGCTGCACCGCCAATTGGAACGCCAGGC 10057
Query 3010 GCGCGTGC-GCAAGTACGACGAGACGGGGAAGGAATCGGATCTGAACCCGAAGATTGCGT 3068
| | | || | | | | ||| | ||| | || || ||||| || | ||
Sbjct 10058 CAGAATTCAGCGCTTTCAGGGCGGCGGT-ACCGAAACCGAGCTCAACCCTAACCTGGCTA 10116
Query 3069 CGCGCAACGCCGGCCCGAAACGCCGTGCGCCCCGTAACGAAATCAGCGACGAACAGCACA 3128
||||||| || ||||| | || ||||| |||||||| || ||| |
Sbjct 10117 AACGCAACGAGGGTCCGAAGAAAAAGACCCCAAAAAACGATATCAGCGAAGAGCAGATCG 10176
Query 3129 AGCGCATCATCGAAGCGTTCCGCGATTCGCTGTT-CGACTATCAGAAAGTCTGGTATCGG 3187
||| | |||||||| ||| |||||| |||||| ||||||| |||||| |||
Sbjct 10177 AGCTGTTGCGTGAAGCGTTTATCGACG-GCTGTTTCGACTACCAGAAAGACTGGTACCGG 10235
Query 3188 AACGGCGATCAGCGCACGCGCAACATCCTGAAATCGCGGCAGATCGGTGCGACGTGGTAC 3247
||| |||| || || ||| |||||| ||| ||||||||||| ||||| | |||
Sbjct 10236 GCTGGCAATCAACGGACTCGCGTCATCCTCAAAAGCCGGCAGATCGGCGCGACCTATTAC 10295
Query 3248 TTCGCGCGCGAGGCGCTCGTCGACGCCCTCGACACCGACCGTAATCAAATCTTCCTGTCG 3307
|| || ||||||||| | | || || || || |||| || ||||| |||||||||||
Sbjct 10296 TTTGCCCGCGAGGCGTTTCTTGATGCGCTGGAAACCGGGCGCAATCAGATCTTCCTGTCC 10355
Query 3308 GCGAGCAAGGCTCAGGCGCACGTCTTCAAGCAGTACATC-ACGCAGTTCGCGCGCGGGGC 3366
|| || || || | | || ||||||| | ||| || || || | ||
Sbjct 10356 GCATCGAAAAACCAAGCCTATCTGTTTCGCGGGTACATCCAGGCATTT-GCCCGTGAGGT 10414
Query 3367 AGCCGACATCGAGCTCACGGGCGATCCGATTATCTTGCCGAGCGGCGCGACGCTGTACTT 3426
|| ||||||| ||||| ||||| || | ||||| | |||||| ||||| ||
Sbjct 10415 TATCGGTGTCGAGCTGACGGGGGATCCCATCGTATTGCCCAACGGCGCCGAGCTGTTTTT 10474
Query 3427 CCTGGGCACGAACGCGCGCACCGCGCAGTCGTACCACGGCAACTTCTACTTCGACGAATA 3486
||| || || || ||||| ||||| ||| ||||||||||| ||||||||||||||||
Sbjct 10475 CCTCGGTACCAATGCGCGTACCGCCCAGGGCTACCACGGCAATTTCTACTTCGACGAATT 10534
Query 3487 CTTTTGG--GTTCCGAAGTTCCGCGAGCTGAACAAGGTCGCCTCCGGCATGGCGATGCAC 3544
||| ||| |||| ||||| || |||||||||||||| || |||||||| ||||||
Sbjct 10535 CTTCTGGACGTTC--AAGTTTGAGGAACTGAACAAGGTCGCTTCGGGCATGGCCATGCAC 10592
Query 3545 AAGCGCTGGCGCAAGACGTACTTCAGCACGCCGTCCAGCGTCACGCACGAGGCGTACGCG 3604
||| |||||||| || |||||| |||||||||||| | | || ||||| ||| |
Sbjct 10593 AAGAAGTGGCGCAAAACCTACTTCTCGACGCCGTCCAGCATGGCCCATGAGGCCTACACC 10652
Query 3605 TTCTGGAGCGGCGCGCACGCGAACCGCGGCCGCGCCGCGGGCGAGCGCATCCAGATCGAC 3664
||||||| ||||| || | ||| || | |||| | | || | || |||||
Sbjct 10653 TTCTGGACCGGCGAGCGCTTCAACAAGGGTAAGCCAGCGGCGCAACACACCAAGGTCGAC 10712
Query 3665 ACGAGCCACGAGGCGCTCGTGCGCGGCATGTTGTGCGAGGACGCGCAGTGGCGGCAGATC 3724
||||| ||||||| | || ||| ||||||||| | |||||||||||||
Sbjct 10713 GTTTCCCACGGGGCGCTCCAACAGGGGCGGTTCTGCGAGGACCGGTTGTGGCGGCAGATC 10772
Query 3725 GTGACCGTGCTCGATGCGATGGCGGGCGGCTGCGACCTGTTCGACATCGACGAGCTGCGC 3784
|| ||| | || || || | |||||||| || ||||||||||| || ||| ||||
Sbjct 10773 GTCACCATCCTGGACGCAGAGCACGGCGGCTGTGATCTGTTCGACATTGAGGAGTTGCGT 10832
Query 3785 CGCGAGTACAGCGCCGAGGAATTCGCGAATCTGCTCATGTGCCAGTTCATCGACGATTCG 3844
|| ||||||||| | |||| ||||| || ||| | ||||| |||| | |||||| |
Sbjct 10833 CGGGAGTACAGCCCTGAGGCGTTCGCCAACCTGTTGATGTGTGAGTTTGTTGACGAT--G 10890
Query 3845 CTGTCGG--TGTTCAAGCTGTCGGACCTGCAACGCTGCATGGTCGACTCGTGGGAAGAAT 3902
| | | | || | || || ||||| |||||||||||||| |||| ||||
Sbjct 10891 GAGCCAGCATCTTTCCGTTGGCGTTGCTGCAGAGCTGCATGGTCGACAGTTGGGTTGAAT 10950
Query 3903 GGGCGGACGACTTCTCGCNNNNNNNNNNNNNNNCGTTCGGCTATCGCGAGGTGTGGGTCG 3962
|||| || |||| | || ||||||| | || |||| ||| |||
Sbjct 10951 GGGCAGAGGACTACAAGCCATTCGCCATGCGGCCGTTCGGTGACCGTCAGGTATGGATCG 11010
Query 3963 GCTACGATCCGGCGCTCACGGGCGACTCGGCGGGGCTCGNNNNNNNNNNNNNNNNNNNNN 4022
||||||| || ||| || || || | | ||||| |
Sbjct 11011 GCTACGACCCAGCGGAAACCGGTGATTGCTCCGGGCTGGTGGTGGTTGCGCCGCCGCTGG 11070
Query 4023 NNNNNNNNNNNNCCTTCCGCGTGCTCGAACGTCATCAGTTCCGCGGCAACGACTTTGAGG 4082
|||||||| || || || || || ||||| |||| ||||||| ||
Sbjct 11071 TACCGGGCGGCAAATTCCGCGTCCTGGAGCGGCACCAATTCCGGGGCATGGACTTTGCGG 11130
Query 4083 AACAGGCCGCGGCGATCGAGGCGATCACGCAGCGCTACAACGTCGGCTACATCGCGATCG 4142
||||| || ||| | || | |||||| || ||| |||| ||| |
Sbjct 11131 CCCAGGCGGCATTTATCAAAAACGTCTGCGACCGCTACTGGGTGACCTATATCGGGATTG 11190
Query 4143 ACACCACGGGCATGGGGCAAGGCGTCTACCAGCTCGTGCGCAAGTTCTTCCCGGCCGCCG 4202
| ||| || |||| ||||| ||||| |||||| ||||||||||||| |
Sbjct 11191 ATGTCACCGGGCTGGGTAGCGGCGTGGCGCAGCTGGTGCGCCAGTTCTTCCCGGCTGTGA 11250
Query 4203 TCGCGCTGAACTACTCGCCCGAGGTGAAAACCCGCCTCGTGCTCAAGGGCCAGTCCGTCG 4262
| | | | ||| |||||||| || ||||| ||||| ||||| |||| | | |||
Sbjct 11251 CCACCTTCAGCTATTCGCCCGAAGTCAAAACACGCCTGGTGCTGAAGGCCTATGACGTGA 11310
Query 4263 TCCGGAACGGCCGCCTGCAATTCGACGCGGGCTGGACCGATCTGGCGGCGGCGTTCATGG 4322
||| |||||||| ||| | |||||||| || |||||||| ||||| | || | ||||
Sbjct 11311 TCCATAACGGCCGGCTGGAGTTCGACGCCGGGTGGACCGACATGGCGCAGTCGATGATGG 11370
Query 4323 CGATCAAACAGACGATGACGGCGAGCGGCCGTCAGGCGACCTACACCGCCGGCCGCACCG 4382
||||| ||||| | || || |||| || ||| ||||||||||| || |||| ||
Sbjct 11371 CGATCCGCAAGACGGTCACCGCAGGCGGTCGCCAGTACACCTACACCGCAGGGCGCAACG 11430
Query 4383 ACGAGACGGGCCACGCCGACCTGGCGTGGGCG 4414
|| | || ||||| ||||||||||| ||||||
Sbjct 11431 ACAACACCGGCCATGCCGACCTGGCCTGGGCG 11462
Score = 302 bits (334), Expect = 1e-77
Identities = 515/726 (71%), Gaps = 22/726 (3%)
Strand=Plus/Plus
Query 733 GCCAGTTCGATGTTTTCGGCCACGCAGCCGCAGCCGAAGTCTTCGACCACGTAGGCGTCG 792
||||||||||||||||| || | || | || | | |||||| | ||||| |||||
Sbjct 7747 GCCAGTTCGATGTTTTCAGCGAGCGAGGCACATTCCAGGTCTTCAATGACGTATGCGTCA 7806
Query 793 TTCGACGATTCGTAGTTCTCGATGCGGTCGCGTTCCGGCACTTCCTTCAGCG-TGCGCCG 851
|| ||| |||||||| ||||||||||| || | |||| | | | || |||| ||
Sbjct 7807 TTGACCGACTCGTAGTTTTCGATGCGGTCACGCTT-GGCATTGTCGACGACGGTGCGGCG 7865
Query 852 GCGCGCGCCTTCCTGGTAGTAGATCGACAGATTTGACAGCTTCGTGACCATCAGCGCGCG 911
||| ||||||||| ||||||||||||| ||| |||||| ||||||| || | ||||
Sbjct 7866 GCGGCTGCCTTCCTGCCAGTAGATCGACAGGTTTTCCAGCTTGGTGACCAGCAACCCGCG 7925
Query 912 CTTCGGGAAGAACGGCACGCGCACGGCCGGCAGATTGCCGATGCGCTTCTGGCTCACGAT 971
| ||||||| | |||||||||||||| |||| |||||| | |||||| || || ||
Sbjct 7926 CGGCGGGAAGTAAGGCACGCGCACGGCTGGCAAATTGCCCAAGCGCTTTTGACTGGTGAC 7985
Query 972 CAGATCGGCCGCGAGCCGCTCGGTCGGCGCCTGCGTC-GCGTTGACGATCGGGAAATACT 1030
| |||||| || ||| || |||||||| | ||| ||||| ||||||||||||||
Sbjct 7986 GATATCGGCGGCCAGCATTTCAGTCGGCGCGT-TGTCTTTGTTGATGATCGGGAAATACT 8044
Query 1031 TGTCGTGCAGCAGCTCGCGGCCGCAGATCACGACGAGGCCCGTGTCTTCCTGGAACCACG 1090
||||| |||||| | ||| ||||||||||| || || | | |||||||||| ||||||
Sbjct 8045 TGTCGGCCAGCAGTTGGCGACCGCAGATCACCACCAGATCAGGGTCTTCCTGGTACCACG 8104
Query 1091 GGTCGATCATCGACGACACGATATCCATCACGAGCGCGTCGAGGTTCTCGTAATC--GCC 1148
| | || | | ||| || | || || ||||||||||| | | || |
Sbjct 8105 GCGCAATGAACTCTTCCACCATGCTGAATACCAGGGCGTCGAGGTTGGTGAAGTCTTTAC 8164
Query 1149 CGCCTTGCCGACGAGCACCTTGCCGGCCTGCTTCG-CGCCTTCGTGCAGCACGC--GCTG 1205
|| | |||| | | ||||||| ||||| | |||| | || |||| || |
Sbjct 8165 CGGC--ACCGATGGTGATTTTGCCGG-AGCCTTCGACCACTTCCTTCATGACGCGGGCGG 8221
Query 1206 CGCTGCGCGCTCGCGGTACTGTTGCAGCCAGCCGATGTTCACGTCCTGCAACAGCGGGTT 1265
|| | || |||| || |||||||| || ||||| |||||||| || || ||
Sbjct 8222 CG-TTTTCG-GCGCGCATCTTCTGCAGCCAACCAATGTTGACGTCCTGGCGAAGTGGATT 8279
Query 1266 --TGCCTGACGGTCGGTCGTCGCGGC-CGCCTTCACGCCGTTCCAGCCGATCATGATGCG 1322
|| ||| ||| || ||||||||| || | | ||||||||||| ||||||| ||||||
Sbjct 8280 GGTGGCTG--GGTTGGACGTCGCGGCGCGAC-TGACGCCGTTCCAACCGATCAGGATGCG 8336
Query 1323 ATCGAGCGCCCCCTGGTTGAGGATCACGTCGCGGATGCGCTGCTGGAAGTCGGCGAACTT 1382
|| |||||| | || ||||| |||| || || || ||||||||||| ||||||
Sbjct 8337 GTCCAGCGCCTGGCGTTTCAGGATGGCGTCACGAATACGGGCCTGGAAGTCGGGGAACTT 8396
Query 1383 CGCCCACATGTCGAGCTTGC-GATACGGAATCGCCGTGTCGTAGTCGGTCTTCTCGCAGC 1441
|||||| || | ||||| | ||||| | || ||| ||| ||||| | ||||
Sbjct 8397 GGCCCACGCATCCAACTTGCTGTAACGGAGGTG-GGTATCGAAGTTGGTCTGCGAGCAGA 8455
Query 1442 GGTAGC 1447
|||||
Sbjct 8456 AGTAGC 8461
Score = 208 bits (230), Expect = 2e-49
Identities = 313/442 (71%), Gaps = 2/442 (0%)
Strand=Plus/Plus
Query 4939 GTGAACGGCTGGCAGGAGCGGCACGAGTTCGAGCCCGACAGCGTGTTCCAGCT-CGTGCG 4997
||| | |||||| |||| ||| |||| ||||| | || | || || || || |
Sbjct 11963 GTGCAAGGCTGGAAGGATGAACACCAGTTTGAGCCGGGAAGTATTTTTCATCTGCGAGAA 12022
Query 4998 GCCGGACATCAATCAGGAGGTCTACGGCCTGCCCGAGTATCTGAGCTCGCTGCACTCGGC 5057
|| ||| | | |||||| | || ||| |||| |||| | || | |||| |||||
Sbjct 12023 GC-GGATTTGCACCAGGAGATTTATGGCTTGCCGGAGTGGATTAGTGCCTTGCAGTCGGC 12081
Query 5058 CTGGCTGAACGAATCGTCGACGCTGTTCCGGCGCAAGTATTACGAGAACGGCAGCCACGC 5117
| ||| ||||||||| | ||| ||||||| |||||||| |||||||| ||||| |||||
Sbjct 12082 GTTGCTCAACGAATCGGCCACGTTGTTCCGCCGCAAGTACTACGAGAATGGCAGTCACGC 12141
Query 5118 CGGCTTCATCCTGTACATGACCGACGCCGCGCAGAAGCAGGACGACGTGGACAACATGCG 5177
||||||||| || ||||||||||| ||||| |||| | ||| | ||| ||||
Sbjct 12142 CGGCTTCATTCTCTACATGACCGATGCCGCACAGACTGAAACCGATATCGACGCTTTGCG 12201
Query 5178 CGACGCGCTGAAGAACGCGAAGGGGCCTGGCAACTTCCGCAACGTGTTCATGTACGCGCC 5237
| | || || ||| || | |||||||| ||||| || |||||| |||| |||| ||||
Sbjct 12202 CAAGGCTCTCAAGGACTCCAAGGGGCCAGGCAATTTTCGCAACTTGTTTGTGTATTCGCC 12261
Query 5238 GGGCGGGAAGAAGGACGGCATCCAGCTCATCCCCGTGTCCGAGGTCGCCGCGAAGGACGA 5297
||| ||||||||||| || ||||| ||||| || ||||| || || ||||| ||
Sbjct 12262 CACCGGCAAGAAGGACGGGATACAGCTGATCCCGGTCAGTGAGGTGGCGGCCAAGGATGA 12321
Query 5298 GTTCTTCAACATCAAGAACGTGACGCGCGATGACCTGCTCGCCGCGCACCGCGTGCCGCC 5357
||| | ||||| ||| || || || || |||| ||| || | || ||
Sbjct 12322 ATTCAACTCGATCAAAAACCAAACCCGTGACGATGTGCTAGCCAGCTTGCGTATTCCACC 12381
Query 5358 GCAGTTGCTTGGCATCGTGCCG 5379
|||| || | ||||| ||||||
Sbjct 12382 GCAGCTGATGGGCATTGTGCCG 12403
Score = 91.5 bits (100), Expect = 3e-14
Identities = 88/112 (79%), Gaps = 6/112 (5%)
Strand=Plus/Plus
Query 36718 CGGCAGCACCACGCCGAGCTCGGCGAGGCCGGGGTTCGCTTCGAGCACGGCTTC---AAC 36774
|||||| | | |||| | ||||| ||||||||||| ||||| |||||||| || |||
Sbjct 6331 CGGCAGGATCGGGCCGTGGTCGGCCAGGCCGGGGTTGGCTTCAAGCACGGCCTCGGTAAC 6390
Query 36775 CGTGCCCGCCGTGCTGCCGTAGTGCCTCCAGCACAGCGCGTCGAGCGTCTCG 36826
||| || |||| ||||||||||| |||||| |||||||||| || |||
Sbjct 6391 ---GCCGGCAGTGCGGCCGTAGTGCCGCCAGCAAAGCGCGTCGACGGTGTCG 6439
Score = 87.8 bits (96), Expect = 4e-13
Identities = 234/352 (66%), Gaps = 12/352 (3%)
Strand=Plus/Plus
Query 35238 TACGCGCGGTCGAGCTTCACGTCATACAGGTTGATCGCGAAT--TCCGGGCCGTTGTAGC 35295
|| ||||| | |||||| ||| || || || |||| || ||||| |||||||||
Sbjct 4799 TAGGCGCGCTGGAGCTTGGTGTCGTAGAGATT--TCGCAGATAGTCCGGCCCGTTGTAGA 4856
Query 35296 CTTCCGCGAACGCTGCCCACTTCCGGGCACGAAGCGCCGCTAGCAGCTTCTTGTCGGCCG 35355
| |||||| ||||| || |||| || ||| ||||| | |||||
Sbjct 4857 GCTTGGCGAACTGAGCCCATTTGCGGGTTTTCAGGGCCTTGTGCAGCACCGGGTCGGTTT 4916
Query 35356 CGACGTACCGCACGAACGCGTCGAGGTGCTCGGCTTCGCCCA-GCTCCATACGGGACACG 35414
||| | | || ||| || ||||| || | | ||| || |||| | | | |||
Sbjct 4917 CGATGAAGCGGGTGAAGGCCTCGAGCTGTTGCGATTCACCGGCGCTCATTGCCGC-CACA 4975
Query 35415 AATTCGTCGACGCTCGCGTAACCCAGGCGTTTCCAGTGATACGCCATGATCTGGAACGCG 35474
||||| | ||||| | ||| || || || ||||| ||| | |||| |||||||| |||
Sbjct 4976 AATTCCTGCACGCTTGTGTATCCGAGACGATTCCAATGAAAGCCCATAATCTGGAAAGCG 5035
Query 35475 CCCCAGCTCGCGGACTCGTAAGCGGATGCCGCGTCGAT---GCGCGCCGCAGTGTCGAGC 35531
|||||| || ||||| | |||| | | ||||| ||| ||| || | ||
Sbjct 5036 CCCCAGGAAGCCGACTCCAAGGCGGCGGTGTCATCGATCAGGCGGGCCATAG---CTAGT 5092
Query 35532 CGCACGTATTCGGCGGCGCCGCCCTGGTAGCCGCCGCGCTTCGGGTTGACGA 35583
|| || |||||||| |||||| ||| || ||| | |||||||||||||
Sbjct 5093 CGTTGGTGTTCGGCGGTGCCGCCGATGTATCCACCGGGTTTCGGGTTGACGA 5144
>seq3088488
Length=17142
Score = 378 bits (418), Expect = 2e-100
Identities = 1474/2281 (65%), Gaps = 131/2281 (6%)
Strand=Plus/Plus
Query 24192 CTACGTATCCGGGCGCGCTCGCGCCAGTCCATCAATTCGGCCAGGGAGAAGGCGGCCATA 24251
|| |||| || |||||| |||||||||||||||| || |||| || |||||
Sbjct 14392 CTCCGTACCCTGGCGCGTTCGCGCCAGTCCATCAGGTCTTGCAGGCCCAACTGATCCATA 14451
Query 24252 TCGCGCGGCGTCCAGCCAAACACCGTCGCGATATCGGCCATCGCGTCTTCTACGCGGGCC 24311
|| ||| | |||| ||| ||| || | ||||||||| ||||| ||||||||
Sbjct 14452 TCAGCCGGTGCCCAGTGAAAAACCACAGCCAGATCGGCCATGGCGTCCTCTACGCGACGA 14511
Query 24312 GGGATTCCATGCTCGCTTTCAGCGCCTTCGGCATCAAAAAACCGGCGAAGATACCCCCCA 24371
||||| | || | | ||| || |||| ||| ||||||||||| || | | | ||
Sbjct 14512 GGGATGC-ATCC--GTCTTCGCCGACTTCTGCAACAAAAAACCGGAGATTTTGCTGCTCA 14568
Query 24372 ACGCCACGAGGTCGGCCGGGTCCATGCCGGCCACGTCGAACTCGGTCAGCGTCGGCGTGC 24431
|||| ||||||||||||||||||||||| || |||| |||| || | |||||||
Sbjct 14569 GGGCCAGTAGGTCGGCCGGGTCCATGCCGGCGACTTCGACGACGGTGAGGCTTGGCGTGC 14628
Query 24432 TGATGCGCGGCAACACCTTGCGCAGCGCGTCGACATCGAGATTCACGAGTGCGGCGAGCG 24491
|||| ||||||| |||||| ||| | ||||||| | | || || | | ||
Sbjct 14629 TGATACGCGGCAGAACCTTGATCAGGCTGGCGACATCCATCTGCAGCAGCTCTACCAGGC 14688
Query 24492 ACGTGCCGCGCAGCGCGCCCGCGGCTGGCTTGCGCAACGTCAC-CTGCGTAATGGTC-TG 24549
| |||||| | | |||| | | |||||||||| || | ||| | ||| | ||
Sbjct 14689 TCACGCCGCGTAACTCGCCGGAGTTGGGCTTGCGCAGTGTGATGCTGT-TGATGCTGGTG 14747
Query 24550 CCCTTCGCGCTCGATCGGTGTGTCGAGCGTGTGCGTGTTCTCGTCGGGC-GCGGCGTGGC 24608
| |||| ||||||||| ||||| || ||||||||||||| | || || ||
Sbjct 14748 GTCC-CGCGACGGATCGGTGTATCGAGAATGACGGTGTTCTCGTCGGCCAGCTGCT--GC 14804
Query 24609 CCGTC--GTT--TCGATGTGAGCGGTATCGATGG---TCG-TCATGGTGTTTCCTGGGTT 24660
|||| ||| ||| || || | | || | ||| || ||||| || ||||
Sbjct 14805 ACGTCAGGTTGTTCGGTGGTTTCGTTCTTCATTGGATTCGCTCCTGGTGATTAAAGGGT- 14863
Query 24661 GGATGTGAAATTGGACTGGCCCGCGCTCGACGCGGGCGTCGATTACAGGCCCATCGCGCG 24720
|||| || || |||| | | ||| | | | | |||||| ||
Sbjct 14864 -GATG----AT------------CGATCGAGG-GTGCG--GGTCAGATGCCCATGCCGTT 14903
Query 24721 GCGAAGGTCCGACGCGAGGTCCATGCCGTTGATCTTCTCGACCGCGTTCACGAAGTCGAG 24780
||| | | | | | ||||| ||||||| ||||||||| ||| | | ||||
Sbjct 14904 GCGGTGCTTCTCCAGCATGTCCACACCGTTGACCTTCTCGACAAAGTTGAGCAGATCGAT 14963
Query 24781 CTCGATGAGGTCGCGCCCGTTCACGGTCAGCTTGTAGTAGCTGGCGTTGGTCGTGATCTT 24840
|||||||| || || | ||||||||||||||||||||| | |||| || ||
Sbjct 14964 CTCGATGATTTCTTCGCCATCTACGGTCAGCTTGTAGTAGCTGCAGGTGGTGGTCATGGA 15023
Query 24841 GAATTTAGTGTCTTCCTTCGCCTTCGCGGTGCCCATGTCGATCTCTTCGTGGCGGCCCTT 24900
| || |||||| || | || || |||||| ||||| |||||| |||||
Sbjct 15024 GTGTTCAGTGTCCTCGCCGGGCTGGGCATCGCCCATCTCGATGGTTTCGTGACGGCCACG 15083
Query 24901 CACTACCACTTCGATCTGGTCGTGCTTCT--TGCTGTCCTCGCGACGATAGCCGCCGGCG 24958
||| |||||||| | | | | |||| || |||| || | | || ||| | |
Sbjct 15084 CACAACCACTTCCACATTGCTGA-CTTCGCCTG-TGTCGTCTTGCTGGTAAGGGCCAGAG 15141
Query 24959 AAGCGCAGCAGCACGCCGTCGTGCTGTACGGCGCCGTACTGTTCGAGC-ACTTC-GACCA 25016
|| ||||| ||| | | | | || |||||| |||| || | || || |
Sbjct 15142 AATCGCAGGGCCACACTGGAGGCGTTGACCGCGCCGAACTGACGCAGAGAGATCAGATC- 15200
Query 25017 TGAAGCCGCCGCACGTCCACTCGAGCTGGA-GC--TCTTCGC---TGCCGTAGTCGATTT 25070
|| ||| ||| | |||| |||| ||||| || || ||| |||| ||| ||
Sbjct 15201 -GAGGCCACCGGTCTTCCATTCGAACTGGATGCCGTCGTCGGACATGCCCAGGTCAGCTT 15259
Query 25071 TCACGGGGCCGGTCATGCCGCTGCCCTGCCACGCTTCCATCTTGCGCTTGAGCTTCGGAA 25130
| || ||||| ||||||||| ||| | |||||||||||||||| ||| || |
Sbjct 15260 TGACCGGGCCATTCATGCCGCCGCCGCGATACGCTTCCATCTTGCGGCCGAGGGAGGGCA 15319
Query 25131 GATTGAGCTCTTCGACTTCGCCCA--CGA---AGTTCGCGCCGTTGTGAAAGACGTTGAA 25185
| |||| |||||| || | ||| || | ||||| | || | |||||
Sbjct 15320 GGGTGAGG-----GACTTCACCAAGCCGAGATAGCTGTTGCCGTCATTGAACAGGTTGAG 15374
Query 25186 GCCCTTCAGTTTTCGAGGCATACCCATTGCATTTGACTCC--------TGTT-------A 25230
| || || || |||||||| |||| || | |||| |||| |
Sbjct 15375 GTTTTTGAGCTTGCGAGGCATTGCCATGGCGGTGTTCTCCGGGATACGTGTTCAGGGTGA 15434
Query 25231 GCCCGCCACGCGCG-----CCGG----------------------GAAATCGGCGAGGAA 25263
| | || |||| | |||| ||| ||| ||| |
Sbjct 15435 ACTCCCCTCGCGGGGAGACCCGGTTTAGCTGCTGATGCCCTTGGCGAAGTCGATCAGGTA 15494
Query 25264 GCGGTCGGTGATGCGCTGGCGCAGCACCAGATTTTCGAGAGGCGGAACCGGCGTGTAGTC 25323
||||||||||| |||||||| | || | ||| || ||||| || || ||||||||
Sbjct 15495 ACGGTCGGTGATTCGCTGGCGGAAGGTGAGGTCTTCAAGTGGCGGCACGGGGGTGTAGTC 15554
Query 25324 GTAATCGATGTACGCCTTGCCGGACGCGAGAATGTCGGCCGTGTTC--GGC-TCCGGATC 25380
|||||| | | |||||||| | ||| |||| ||||| | | ||||| |
Sbjct 15555 GTAATCAAGCCAGAGCTTGCCGGCCTTGAGGGTGTCTTTGGTGTTGATGTCGTCCGGGT- 15613
Query 25381 GATCCACGCGCTACCGCCGATCAGGTAGCCGTTCGCGACCTGCTGCCGAAACCAGCCGTT 25440
|||| || ||||||||||||||||| | | | || || | | | || |
Sbjct 15614 --TCCAGCAACTGCCGCCGATCAGGTAGCCCTGGGATTTCAACTCGCGCATCTTGGCGCT 15671
Query 25441 GATGCTTTCCACGATGTCGCGCGCGAGCGACGGATTCAGCGGGCCGTCGACGACGGGCAT 25500
| || ||| || | |||||| | || || | | || |||| ||| || | |||
Sbjct 15672 TACGCCTTCGACCAGGTCGCGTACCAGGGAGGCGTGCATAGGGCGGTCAACTGCCCACAT 15731
Query 25501 CTGCGCTTCGGCGATCGAATCGCCGGCCACCTGAGCGGTGCGCGTGTAGTTCTCGAACGC 25560
||||||||| | || | || || | ||| |||||||| |||||||| ||||| ||
Sbjct 15732 GTGCGCTTCGCCCATGGTGTCCGCGAGGATCTGCGCGGTGCGGGTGTAGTTTTCGAAGGC 15791
Query 25561 GAACTTCGGATCGTCCGAGCACGTGCGCTCGCCCCAGAACCGGAAGCCGTTGCGGTTCAC 25620
|||| ||| || || ||| ||||| |||||||| || || |||||| ||| |
Sbjct 15792 GAACAACGGGTCATCACTGCAGGTGCGGCTACCCCAGAAGCGAAAACCGTTGGCGTTGAT 15851
Query 25621 GAGCGTCGTCACTTCGT-GCTCGTTCAGGTAGCCCGCATCGGTCGCCGGGTCCTGCAAAT 25679
|| || || || |||| ||| ||| |||||| || ||||| || |||| |||| ||
Sbjct 15852 CAGGGTGGTGACGTCGTTGCT-GTTGAGGTAGTTGGCGTCGGTGGCTGGGTTTTGCAGAT 15910
Query 25680 CCCACGACACGTCGGCGCTGATGCCGGACACGCCGTTCACGACGACATTCGAAATCGTCT 25739
|||| |||||||||||||||| |||| |||||| ||||| | || || || | || |
Sbjct 15911 CCCAGAACACGTCGGCGCTGATACCGGTCACGCCACTCACGGCCACGTTGGACAGGGTTT 15970
Query 25740 TGTGCCAGCCGATGTCGTTGTCGATCTTCGCGCGCAAGCCGGCGGCGATCGCCGGCGCCG 25799
| ||||| || | || | ||||||||| ||||| | |||| |||| ||| ||||
Sbjct 15971 TATGCCAACCCGTCTCTTGGTCGATCTTGGCGCGAAGGCCGAGGGCGCGGGCCACGGCCG 16030
Query 25800 GGATGACAGCCGTCGAGTTCGTCGTGTCGTCCCAGCCGAGCCAGTCCGGCCAGATCACCA 25859
| || ||| ||| || ||||||| || |||||||||| |||||||
Sbjct 16031 AAGCGCTGGCGGTCTTGTTGGTGACAGTGTCCCAGTTCAGGAAGTCCGGCCAAATCACCA 16090
Query 25860 TGATTTCGCGTTGGCCGAACTGCTTGCGGTACGCGGCGGCTTCTTCCTTCGTTTTGCAG- 25918
| |||||||| ||||| | || ||||||||| | | |||||||| |||||||||
Sbjct 16091 TCATTTCGCGGGCACCGAAGTTCTCGCGGTACGCCACTACCTCTTCCTTGGTTTTGCAGT 16150
Query 25919 -CCGGACGCCGACACATAGGCCATCGCGCGCAGCGACTGCGCGGTCGCCGCGAGCGCGGC 25977
|| | ||| || || || | |||||||| | ||| | || |||| ||||
Sbjct 16151 TCCAGGCGC--TTACGTATGCAAAGGCGCGCAGGTCTTTGGCGATGGCGCCGAGGGCGGT 16208
Query 25978 CGCCACCGGCTGCGTATCGAGGCCGGGCGCCGCGAGAATGCGCGGCTTCACGCCGA-GCG 26036
|| || ||| | |||||||| ||| | | || || ||||| ||| ||| | |||
Sbjct 16209 GGCTACTGGCAAACTGTCGAGGCCTGGCACGCCAAGGATACGCGGAGTCATGCCCACGCG 16268
Query 26037 CACCCTGCGCGGCGAGCAGCGCCTTGATGCCCGTGTACTTGCCGTCCGGCGTCACGGTGC 26096
|| || |||||||| || || ||||| ||||| | ||| || || ||
Sbjct 16269 TGATTTG-GCTGCGAGCAGAGCTTTCATGCCGGTGTATTGACCGGTTGGTGTTGTACCGC 16327
Query 26097 CGAT---GACGTTCGAGGTCGTCTCGTCGGCGTCCTTGCCTTCGGCGACGCGCACGACG- 26152
| || | || ||| |||||| | | |||| |||||| ||| || || |||
Sbjct 16328 CAATCAGGGCGCTCGTAGTCGTCGCTT---CGTCAGCGCCTTCTTTGACCCGTACCACGA 16384
Query 26153 -ACGGTCAGCGGCTTCGTCTGCTTGCCGATCGCGT-CGAGCGTGCGGCGCAGCGTGCCTT 26210
| || | ||||| ||||| | | |||| | | | || || || ||| ||||| |
Sbjct 16385 TAACGTAA--GGCTTGGTCTGGTCGGCGATGCCTTGCAGGCTGGCAGC-CAGGGTGCCCT 16441
Query 26211 TCTTGCCGGCCTTGCCGAGCGCCGCGACGACGTTCGTCAGCAGCACGGGCGTATTGAGCG 26270
| |||||||||||||| || | ||||| || | || || || || | || |
Sbjct 16442 TGACGCCGGCCTTGCCGACGGCGGTTTGCACGTTGGTGATGAGGACTGGAGTGTCCAGAG 16501
Query 26271 GAAACGCGCTCGCGTCAGCGTCGGCCGCCGTGCAGACGACGCCGAGCACGGCCGTCGACA 26330
| || || | ||| || || | || ||||| || | ||||| || || || | |
Sbjct 16502 GGAAAACGAGTGGGTCCGCATCTTCAGCGGTGCAAACCATGCCGATGACTGCGGTGGGAA 16561
Query 26331 CTGAGCGAATCGGGCGGCCGCCTTCGTTGATTTCGATGACGCGTACGCCGTGGTGGTAAT 26390
| |||||| |||||| ||| ||||||| ||||||||| || ||||||||| | ||||
Sbjct 16562 TAGTGCGAATGGGGCGGGTGCCGTCGTTGAGTTCGATGACCCGCACGCCGTGGAGATAAT 16621
Query 26391 C 26391
|
Sbjct 16622 C 16622
>seq3063309
Length=1409
Score = 114 bits (126), Expect = 3e-21
Identities = 420/648 (65%), Gaps = 30/648 (5%)
Strand=Plus/Plus
Query 3206 CGCAACATCCTGAAATCGCGGCAGATCGGTGCGACGTGGTACTTCGCGCGCGAGGCGCTC 3265
||||||||||||||| || ||| | || ||||| |||||||| |||| ||| ||
Sbjct 3 CGCAACATCCTGAAAAGCCGCCAGGTGGGCCTGACGTACTACTTCGCCGGCGAAGCGTTC 62
Query 3266 GTCGACGCCCTCGACACCGACCGTAATCAAATCTTCCTGTCGGCGAGCAAGGCTCAGGCG 3325
| |||||| | |||| | || || | ||||||||||| ||| | ||| ||
Sbjct 63 ATGGACGCCGTGCTGACCGGCGACAACCAGGTGTTCCTGTCGGCCAGCCGCTCGCAGTCG 122
Query 3326 CACGTCTTCAAGCAG-TACATCACGCAGTTCGC-GCGCGGGGCAGCCGACATCGAGCTCA 3383
| | ||| |||| ||||||| ||||| || || | | |||||||||||| |
Sbjct 123 GAAATTTTC-CGCAGTTACATCATCCAGTTTGCAAAGCAGTG-GTTCGACATCGAGCTGA 180
Query 3384 CGGGCGATCCGATTATCTTGCCGAGCGGCGCGACGCTGTACTTCCTGGGCACGAACGCGC 3443
| ||| | ||||| | | | |||||| |||| ||| || || ||
Sbjct 181 CCGGCAACCCGATCACGCTCAGCAACGGCGCCGAGCTGCGTTTCTTGTCGACCAATAGCA 240
Query 3444 GCACCGCGCAGTCGTACCACGGCAACTTCTACTTCGACGAATACTTTTGGGTTCCGAAGT 3503
||||||| ||| ||||| ||| || ||||| |||| || || |||||| | | | |
Sbjct 241 GCACCGCCCAGGGCTACCATGGCCACGTCTACGTCGATGAGTATTTTTGGATACGTGACT 300
Query 3504 TCCGCGAGCTGAACAAGGTCGCCTCCGGCATGGCGATGCACAAGCGCTGGCGCAAGACGT 3563
|| | | || | || || ||| | ||||| | |||||| |||||||| || |
Sbjct 301 TCGACAAACTCAGCACCGTGGCCAGTGCCATGGGCACCCACAAGAAGTGGCGCAAAACCT 360
Query 3564 ACTTCAGCACGCCGTCCAGC---GTCACGCACGAGGCGTACGCGTTCTGGAGCGGCGCGC 3620
|||| || || ||||| ||| ||||| | |||||| |||||||| |||| |
Sbjct 361 ACTT---TTCGACGCCCAGCGCAGTCTCGCACCAAGCGTACCCGTTCTGGTCGGGCGAGG 417
Query 3621 A----CGCGAACCGCGGCCGCGCC--GCGGGCGAGCGCATCCAGATCGACACGAGCCACG 3674
| ||| ||| || |||| | | ||| ||| || | | || ||
Sbjct 418 AATTCCGC-AACAGCAAGCGCGGCAAGAAGGCCGGCGGCACCTGGCCCAC--------CG 468
Query 3675 AGGCGCTCGTGCGC----GGCATGTTGTGCGAGGACGCGCAGTGGCGGCAGATCGTGACC 3730
||||| || | | | ||| |||||| |||| || ||||| | | | | |||
Sbjct 469 AGGCG-TCATACACCCAGGGCGCATTGTGCCCCGACGGCCAATGGCGCAAAACCATCACC 527
Query 3731 GTGCTCGATGCGATGGCGGGCGGCTGCGACCTGTTCGACATCGACGAGCTGCGCCGCGAG 3790
|| ||| || || || ||||||||||| ||||||||| |||| | |||| | |||
Sbjct 528 CTGGACGACGCCATAGCCGGCGGCTGCGATCTGTTCGACCTCGAGCAACTGCAGCTGGAG 587
Query 3791 TACAGCGCCGAGGAATTCGCGAATCTGCTCATGTGCCAGTTCATCGAC 3838
||| || || ||||| | | ||| || ||| |||||||||||
Sbjct 588 TACGACGAAGACAAATTCCAGCAGCTGTTCTACTGCAAGTTCATCGAC 635
>seq3053335
Length=1201
Score = 95.1 bits (104), Expect = 3e-15
Identities = 311/474 (66%), Gaps = 17/474 (4%)
Strand=Plus/Minus
Query 1119 CACGAGCGCGTCGAGGTTCTCGTAATCGCCCGCCTTGCCGACGAGC---ACCTTGCCGGC 1175
||| || || || ||||| |||||||||| ||| | || ||||| |||||||| ||
Sbjct 484 CACCAGGGCATCAAGGTTGGCGTAATCGCC-GCC--GGCGCCGAGCGTGACCTTGCCAGC 428
Query 1176 CTGCTTCGCGCCTTCGTGCAGCACGCGCTGCGCTGCGCGCTCGCGGTACTGTTGCAGCCA 1235
| | ||||| || | |||||| |||||| || | ||||| | || ||||||||
Sbjct 427 GT---TGGCGCCCTCTTTCAGCACCTGCTGCGGGGCCTGTTCGCGCAATTGCTGCAGCCA 371
Query 1236 GCCGATGTTCACGTCCTGCAACAGCGGGTTTGCCTGACGGTCGGTCGTCGCGGCCGCCTT 1295
||| ||||||||||||||| | || | || ||||||| || |||||| |
Sbjct 370 GCCCTTGTTCACGTCCTGCAGCTTGGGAAATTTCTCCAAGTCGGTCTGCGTGGCCGCATG 311
Query 1296 CACGCCGTTCCAGCCGATCATGATGCGATCGAGCGCCCCCTGGTTGAGGATCACGTC-GC 1354
||||| | ||||| | ||| || || |||| | || | |||| | ||
Sbjct 310 AGTGCCGTGGAAACCGATAACGATTCGGTCCTGCGCGATGCGCTTTTG---CACGGCGGC 254
Query 1355 GGA--TGCGCTGCTGGAAGTCGGCGAACTTCGCCCACATGTCGAGCTTGCGATACGGAAT 1412
||| ||| | | |||||||| ||||||||||| |||| |||| || ||||
Sbjct 253 GGAATAGCGATCTTTGAAGTCGGGAAACTTCGCCCAGGCATCGATCTTGGCGTATGGAAG 194
Query 1413 CGCCGTGTCGTAGTCGGTCTTCTCGCAG-CGGTAGCGGTTGCTGTCGAGCGCCGTCGGGT 1471
|| ||| | | ||| || ||| ||| || || |||| ||||||| | ||
Sbjct 193 GCCCACGTCCGACTGGGT-ATCAGCCAGTTCGTATTGGGTGTTGTCCAGCGCCGAAGCGT 135
Query 1472 CGATCGGTTGGCGCGCGGCCTTCGTCGTGTCGGTGCGGCTCGCGATCGGGCCGGACACGG 1531
| | | || || ||| || | |||| |||||||| | || |||||| |||
Sbjct 134 CCTTGGCTTCTCGATCGGTGGTCTTGGTGTTGGTGCGGCCAGTGACTGGGCCGTTCACAC 75
Query 1532 ACAGGCCGAGCTTTTCGCCTTCGAGCTCGGTCACGGGCAGCACGTTGATGCGCT 1585
| | || |||||| || | || ||| |||| || | |||||||| ||||
Sbjct 74 CGATGAAGACCTTTTCACCCTTGATCTCACTCACCGGAACGACGTTGATACGCT 21
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 115910218119782
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