Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09] 3,088,511 sequences; 2,785,377,831 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq155098 82.4 7e-11 >seq155098 Length=7669 Score = 82.4 bits (90), Expect = 7e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 131022 CAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTC 131081 || ||||| ||| | || ||||||||||||||| |||| || || || || || Sbjct 7225 CAACACTAGATGAAGAGTGGACTCCTTTTGAATGCTGTAGTCAGACAAAGTACGTTCATC 7284 Query 131082 CTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTC 131141 || || |||||||| || |||| | |||||||| ||||| |||||||| || || Sbjct 7285 TTCCAGTTGCTTGCCAGCAAAGATCAGTATTTGCTGGTCAGGAGGAATTCCTTCCTTATC 7344 Query 131142 GGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGT 131201 ||| || ||| | | || | ||||| | || |||| |||| || | ||| Sbjct 7345 CTGGATCTTGGTCTTTACATTTTCTATTGTATCCGAGGGTTCGACCTCGAGAGTGATGGT 7404 Query 131202 TTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || || || || || || || ||||||||||| Sbjct 7405 CTTCCCCGTCAGGGTCTTCACAAAAATCTGCAT 7437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 453790090938240