Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_009234.1
Length=35741
Score E
Sequences producing significant alignments: (Bits) Value
seq3088503 491 1e-134
seq3088488 387 3e-103
seq3063309 80.6 6e-11
>seq3088503
Length=21467
Score = 491 bits (544), Expect = 1e-134
Identities = 1028/1531 (67%), Gaps = 14/1531 (1%)
Strand=Plus/Plus
Query 2878 CGTCGAGCGCATCGAGGCATCGCTCGAAGTGCGCATGATGGTGTTGATCGCGAAGGAGAA 2937
|||||||||||||| | |||| |||| ||| || || | ||||| ||||| |
Sbjct 9938 CGTCGAGCGCATCGGCGGGGCGCTGGAAGCGCGGTTGGTGCAGCTGATCCTCAAGGAAAG 9997
Query 2938 GAAGGACGGCGCGGACTACAAGGAAATCGACCTGCTCGGCCGCCAAGTCGAGCGGCTCGC 2997
||| ||||| ||||| ||||||||| || ||||| ||||||| | || || | ||
Sbjct 9998 CAAGAGCGGCGGGGACTTCAAGGAAATTGATCTGCTGCACCGCCAATTGGAACGCCAGGC 10057
Query 2998 GCGCGTGC-GCAAGTACGACGAGACGGGGAAGGAATCGGACCTGAACCCGAAGATTGCGT 3056
| | | || | | | | ||| | ||| | || || ||||| || | ||
Sbjct 10058 CAGAATTCAGCGCTTTCAGGGCGGCGGT-ACCGAAACCGAGCTCAACCCTAACCTGGCTA 10116
Query 3057 CGCGCAACGCCGGCCCGAAACGCCGTGCGCCCCGTAACGAAATCAGCGACGAACAGCACA 3116
||||||| || ||||| | || ||||| |||||||| || ||| |
Sbjct 10117 AACGCAACGAGGGTCCGAAGAAAAAGACCCCAAAAAACGATATCAGCGAAGAGCAGATCG 10176
Query 3117 AGCGCATCATCGAAGCGTTCCGCGATTCGCTGTT-CGACTATCAGAAAGTCTGGTATCGG 3175
||| | |||||||| ||| |||||| |||||| ||||||| |||||| |||
Sbjct 10177 AGCTGTTGCGTGAAGCGTTTATCGACG-GCTGTTTCGACTACCAGAAAGACTGGTACCGG 10235
Query 3176 AACGGCGATCAGCGCACGCGCAACATCCTGAAATCGCGGCAGATCGGTGCGACGTGGTAC 3235
||| |||| || || ||| |||||| ||| ||||||||||| ||||| | |||
Sbjct 10236 GCTGGCAATCAACGGACTCGCGTCATCCTCAAAAGCCGGCAGATCGGCGCGACCTATTAC 10295
Query 3236 TTCGCGCGCGAGGCGCTCGTCGACGCGCTCGACACCGACCGCAATCAGATCTTCCTATCG 3295
|| || ||||||||| | | || ||||| || |||| ||||||||||||||||| ||
Sbjct 10296 TTTGCCCGCGAGGCGTTTCTTGATGCGCTGGAAACCGGGCGCAATCAGATCTTCCTGTCC 10355
Query 3296 GCCAGCAAGGCGCAGGCGCACGTCTTCAAGCAATACATC-ACGCAGTTCGCGCGCGATGC 3354
|| || || || | | || |||||| | ||| || || || || |
Sbjct 10356 GCATCGAAAAACCAAGCCTATCTGTTTCGCGGGTACATCCAGGCATTT-GCCCGTGAGGT 10414
Query 3355 CGCCGACGTCGAGCTCACGGGCGACCCGATCATCTTGCCGAGCGGTGCGACGCTGTACTT 3414
|| |||||||| ||||| || || ||| | ||||| | ||| || ||||| ||
Sbjct 10415 TATCGGTGTCGAGCTGACGGGGGATCCCATCGTATTGCCCAACGGCGCCGAGCTGTTTTT 10474
Query 3415 CCTGGGGACGAACGCGCGTACCGCGCAGTCGTATCACGGCAACTTCTATTTCGACGAATA 3474
||| || || || ||||||||||| ||| || |||||||| ||||| ||||||||||
Sbjct 10475 CCTCGGTACCAATGCGCGTACCGCCCAGGGCTACCACGGCAATTTCTACTTCGACGAATT 10534
Query 3475 CTTTTGG--GTTCCGAAGTTCCGCGAGTTGAACAAGGTTGCGTCGGGCATGGCGATGCAC 3532
||| ||| |||| ||||| || |||||||||| || ||||||||||| ||||||
Sbjct 10535 CTTCTGGACGTTC--AAGTTTGAGGAACTGAACAAGGTCGCTTCGGGCATGGCCATGCAC 10592
Query 3533 AAGCGCTGGCGCAAGACCTACTTCAGCACGCCGTCGAGTGTCACGCACGAGGCGTTCGCG 3592
||| |||||||| ||||||||| |||||||| || | | || ||||| | | |
Sbjct 10593 AAGAAGTGGCGCAAAACCTACTTCTCGACGCCGTCCAGCATGGCCCATGAGGCCTACACC 10652
Query 3593 TTCTGGAGCGGCGCGCACGCGAACCGCGGCCGCGCCGCGGGCGAGCGCATCCAGATCGAC 3652
||||||| ||||| || | ||| || | |||| | | || | || |||||
Sbjct 10653 TTCTGGACCGGCGAGCGCTTCAACAAGGGTAAGCCAGCGGCGCAACACACCAAGGTCGAC 10712
Query 3653 ACGAGCCACGAGGCGCTCGTGCGCGGCATGTTGTGCGAGGACGCGCAGTGGCGGCAGATC 3712
||||| ||||||| | || ||| ||||||||| | |||||||||||||
Sbjct 10713 GTTTCCCACGGGGCGCTCCAACAGGGGCGGTTCTGCGAGGACCGGTTGTGGCGGCAGATC 10772
Query 3713 GTGACCGTGCTCGACGCGATGGCGGGCGGCTGCAACCTGTTCGACATCGACGAGCTGCGC 3772
|| ||| | || ||||| | |||||||| | ||||||||||| || ||| ||||
Sbjct 10773 GTCACCATCCTGGACGCAGAGCACGGCGGCTGTGATCTGTTCGACATTGAGGAGTTGCGT 10832
Query 3773 CGCGAATACAGCGCCGAGGAATTCGCGAACCTGCTGATGTGCCACTTCATCGACGATTCG 3832
|| || |||||| | |||| ||||| |||||| ||||||| | || | |||||| |
Sbjct 10833 CGGGAGTACAGCCCTGAGGCGTTCGCCAACCTGTTGATGTGTGAGTTTGTTGACGAT--G 10890
Query 3833 CTGTCGG--TGTTCAAGCTGTCGGACCTGCAACGCTGCATGGTCGACTCGTGGGAGGAAT 3890
| | | | || | || || ||||| |||||||||||||| |||| ||||
Sbjct 10891 GAGCCAGCATCTTTCCGTTGGCGTTGCTGCAGAGCTGCATGGTCGACAGTTGGGTTGAAT 10950
Query 3891 GGGCGGACGACTTTTCGCCGCTGCTGCTGCGTCCGTTCGGTCATCGCGAGGTGTGGGTCG 3950
|||| || |||| ||| | |||| ||||||||| | || |||| ||| |||
Sbjct 10951 GGGCAGAGGACTACAAGCCATTCGCCATGCGGCCGTTCGGTGACCGTCAGGTATGGATCG 11010
Query 3951 GCTACGATCCGGCGCTCACGGGCGACTCGGCGGGGCTCGNNNNNNNNNNNNNNNNNNNNN 4010
||||||| || ||| || || || | | ||||| |
Sbjct 11011 GCTACGACCCAGCGGAAACCGGTGATTGCTCCGGGCTGGTGGTGGTTGCGCCGCCGCTGG 11070
Query 4011 NNNNNNNNNNNNCCTTCCGCGTGCTCGAACGTCACCAGTTCCGCGGCAACGACTTTGAGG 4070
|||||||| || || || ||||| ||||| |||| ||||||| ||
Sbjct 11071 TACCGGGCGGCAAATTCCGCGTCCTGGAGCGGCACCAATTCCGGGGCATGGACTTTGCGG 11130
Query 4071 AACAGGCCGCGGCAATCGAGGCGATCACGCAGCGCTACAACGTCGGCTACATCGCGATCG 4130
||||| || ||| | || | |||||| || ||| |||| ||| |
Sbjct 11131 CCCAGGCGGCATTTATCAAAAACGTCTGCGACCGCTACTGGGTGACCTATATCGGGATTG 11190
Query 4131 ACACCACGGGCATGGGGCAAGGCGTCTACCAGCTCGTGCGCAAGTTCTTCCCGGCCGCCG 4190
| ||| || |||| ||||| ||||| |||||| ||||||||||||| |
Sbjct 11191 ATGTCACCGGGCTGGGTAGCGGCGTGGCGCAGCTGGTGCGCCAGTTCTTCCCGGCTGTGA 11250
Query 4191 TCGCGCTGAACTACTCGCCCGAGGTGAAAACCCGCCTCGTGCTCAAGGGCCAGTCCGTCG 4250
| | | | ||| |||||||| || ||||| ||||| ||||| |||| | | |||
Sbjct 11251 CCACCTTCAGCTATTCGCCCGAAGTCAAAACACGCCTGGTGCTGAAGGCCTATGACGTGA 11310
Query 4251 TCCGGAACGGCCGCCTGCAATTCGACGCGGGCTGGACCGATCTGGCGGCGGCGTTCATGG 4310
||| |||||||| ||| | |||||||| || |||||||| ||||| | || | ||||
Sbjct 11311 TCCATAACGGCCGGCTGGAGTTCGACGCCGGGTGGACCGACATGGCGCAGTCGATGATGG 11370
Query 4311 CGATCAAACAGACGATGACGGCGAGCGGCCGCCAGGCGACCTACACCGCCGGCCGTACCG 4370
||||| ||||| | || || |||| |||||| ||||||||||| || || | ||
Sbjct 11371 CGATCCGCAAGACGGTCACCGCAGGCGGTCGCCAGTACACCTACACCGCAGGGCGCAACG 11430
Query 4371 AGGAAACCGGCCACGCCGATCTGGCGTGGGC 4401
| | |||||||| ||||| ||||| |||||
Sbjct 11431 ACAACACCGGCCATGCCGACCTGGCCTGGGC 11461
Score = 297 bits (328), Expect = 4e-76
Identities = 513/727 (71%), Gaps = 24/727 (3%)
Strand=Plus/Plus
Query 721 GCCAGTTCGATGTTTTCGGCCACGCAGCCGCAGCCGAAGTCTTCGACCACGTAGGCGTCG 780
||||||||||||||||| || | || | || | | |||||| | ||||| |||||
Sbjct 7747 GCCAGTTCGATGTTTTCAGCGAGCGAGGCACATTCCAGGTCTTCAATGACGTATGCGTCA 7806
Query 781 TTCGACGATTCGTAGTTCTCGATGCGGTCGCGTTCCGGCACTTCCTTCAGCG-TGCGCCG 839
|| ||| |||||||| ||||||||||| || | |||| | | | || |||| ||
Sbjct 7807 TTGACCGACTCGTAGTTTTCGATGCGGTCACGCTT-GGCATTGTCGACGACGGTGCGGCG 7865
Query 840 GCGCGCGCCTTCCTGGTAGTAGATCGACAGATTTGACAGCTTCGTGACCATCAGCGCGCG 899
||| ||||||||| ||||||||||||| ||| |||||| ||||||| || | ||||
Sbjct 7866 GCGGCTGCCTTCCTGCCAGTAGATCGACAGGTTTTCCAGCTTGGTGACCAGCAACCCGCG 7925
Query 900 CTTCGGGAAGAACGGCACGCGCACGGCCGGCAGATTGCCGATGCGCTTCTGGCTCACGAT 959
| ||||||| | |||||||||||||| |||| |||||| | |||||| || || ||
Sbjct 7926 CGGCGGGAAGTAAGGCACGCGCACGGCTGGCAAATTGCCCAAGCGCTTTTGACTGGTGAC 7985
Query 960 CAGATCGGCCGCGAGCCGCTCGGTCGGCGCCTGCGTC-GCGTTGACGATCGGGAAATACT 1018
| |||||| || ||| || |||||||| | ||| ||||| ||||||||||||||
Sbjct 7986 GATATCGGCGGCCAGCATTTCAGTCGGCGCGT-TGTCTTTGTTGATGATCGGGAAATACT 8044
Query 1019 TGTCGTGCAGCAGCTCGCGGCCGCAGATCGCGACGAGGCCCGTGTCTTCCTGGAACCACG 1078
||||| |||||| | ||| ||||||||| | || || | | |||||||||| ||||||
Sbjct 8045 TGTCGGCCAGCAGTTGGCGACCGCAGATCACCACCAGATCAGGGTCTTCCTGGTACCACG 8104
Query 1079 GGTCGATCATCGACGACACGATATCCATCACGAGCGCGTCGAGGTTCTCGTAATC--GCC 1136
| | || | | ||| || | || || ||||||||||| | | || |
Sbjct 8105 GCGCAATGAACTCTTCCACCATGCTGAATACCAGGGCGTCGAGGTTGGTGAAGTCTTTAC 8164
Query 1137 CGCCTTGCCGACGAGCACCTTGCCGGCCTGCTTCG-CGCCTTCGTGCAGCACGCGCTGTG 1195
|| | |||| | | ||||||| ||||| | |||| | || |||| | |
Sbjct 8165 CGGC--ACCGATGGTGATTTTGCCGG-AGCCTTCGACCACTTCCTTCATGACGC---GGG 8218
Query 1196 CCGCGCGCT---CGCGGTACTGTTGCAGCCAACCGATGTTCACGTCCTGCAACAGCGGGT 1252
| ||| | |||| || ||||||||||| ||||| |||||||| || || |
Sbjct 8219 CGGCGTTTTCGGCGCGCATCTTCTGCAGCCAACCAATGTTGACGTCCTGGCGAAGTGGAT 8278
Query 1253 T--TGCCTGACGGTCAGTCGTCGCGGC-CGCCTTCACGCCGTTCCAGCCGATCATGATGC 1309
| || ||| ||| | ||||||||| || | | ||||||||||| ||||||| |||||
Sbjct 8279 TGGTGGCTG--GGTTGGACGTCGCGGCGCGAC-TGACGCCGTTCCAACCGATCAGGATGC 8335
Query 1310 GATCGAGCGCCCCCTGGTTGAGGATCACGTCGCGGATGCGCTGTTGGAAGTCGGCGAACT 1369
| || |||||| | || ||||| |||| || || || |||||||||| |||||
Sbjct 8336 GGTCCAGCGCCTGGCGTTTCAGGATGGCGTCACGAATACGGGCCTGGAAGTCGGGGAACT 8395
Query 1370 TCGCCCATGCGTCGAGCTTGC-GATACGGAATCGCCGTGTCGTAGTCGGTCTTCTCGCAG 1428
| ||||| || || | ||||| | ||||| | || ||| ||| ||||| | ||||
Sbjct 8396 TGGCCCACGCATCCAACTTGCTGTAACGGAGGTG-GGTATCGAAGTTGGTCTGCGAGCAG 8454
Query 1429 CGGTAGC 1435
|||||
Sbjct 8455 AAGTAGC 8461
Score = 138 bits (152), Expect = 2e-28
Identities = 161/215 (75%), Gaps = 2/215 (1%)
Strand=Plus/Plus
Query 4927 GTGAACGGCTGGCAGGAGCGGCACGAGTTCGAGCCCGACAGCGTGTTCCAGCT-CGTGCG 4985
||| | |||||| |||| ||| |||| ||||| | || | || || || || |
Sbjct 11963 GTGCAAGGCTGGAAGGATGAACACCAGTTTGAGCCGGGAAGTATTTTTCATCTGCGAGAA 12022
Query 4986 GCCGGACATCAATCAGGAGGTCTATGGCCTGCCCGAGTATCTGAGCTCGCTGCACTCGGC 5045
|| ||| | | |||||| | |||||| |||| |||| | || | |||| |||||
Sbjct 12023 GC-GGATTTGCACCAGGAGATTTATGGCTTGCCGGAGTGGATTAGTGCCTTGCAGTCGGC 12081
Query 5046 CTGGCTGAACGAATCGTCGACGCTGTTCCGGCGCAAGTATTACGAGAACGGCAGCCACGC 5105
| ||| ||||||||| | ||| ||||||| |||||||| |||||||| ||||| |||||
Sbjct 12082 GTTGCTCAACGAATCGGCCACGTTGTTCCGCCGCAAGTACTACGAGAATGGCAGTCACGC 12141
Query 5106 CGGCTTCATCCTGTACATGACCGACGCCGCGCAGA 5140
||||||||| || ||||||||||| ||||| ||||
Sbjct 12142 CGGCTTCATTCTCTACATGACCGATGCCGCACAGA 12176
Score = 95.1 bits (104), Expect = 3e-15
Identities = 89/112 (79%), Gaps = 6/112 (5%)
Strand=Plus/Plus
Query 34808 CGGCAGCACCACGCCGAGCTCGGCGAGGCCGGGGTTCGCTTCGAGCACGGCTTC---AAC 34864
|||||| | | |||| | ||||| ||||||||||| ||||| |||||||| || |||
Sbjct 6331 CGGCAGGATCGGGCCGTGGTCGGCCAGGCCGGGGTTGGCTTCAAGCACGGCCTCGGTAAC 6390
Query 34865 CGTGCCCGCCGTGCTGCCGTAGTGCCGCCAGCACAGCGCGTCGAGCGTCTCG 34916
||| || |||| |||||||||||||||||| |||||||||| || |||
Sbjct 6391 ---GCCGGCAGTGCGGCCGTAGTGCCGCCAGCAAAGCGCGTCGACGGTGTCG 6439
Score = 87.8 bits (96), Expect = 4e-13
Identities = 234/352 (66%), Gaps = 12/352 (3%)
Strand=Plus/Plus
Query 33328 TACGCGCGGTCGAGCTTCACGTCATACAGGTTGATCGCGAAT--TCCGGGCCGTTGTAGC 33385
|| ||||| | |||||| ||| || || || |||| || ||||| |||||||||
Sbjct 4799 TAGGCGCGCTGGAGCTTGGTGTCGTAGAGATT--TCGCAGATAGTCCGGCCCGTTGTAGA 4856
Query 33386 CTTCCGCGAACGTCGCCCACTTCCGGGCACGAAGCGCCGCTAGCAGCTTCTTGTCGGCCG 33445
| |||||| ||||| || |||| || ||| ||||| | |||||
Sbjct 4857 GCTTGGCGAACTGAGCCCATTTGCGGGTTTTCAGGGCCTTGTGCAGCACCGGGTCGGTTT 4916
Query 33446 CGACGTACCGCACGAACGCGTCGAGGTGCTCGGCTTCGCCCA-GCTCCATACGGGACACG 33504
||| | | || ||| || ||||| || | | ||| || |||| | | | |||
Sbjct 4917 CGATGAAGCGGGTGAAGGCCTCGAGCTGTTGCGATTCACCGGCGCTCATTGCCGC-CACA 4975
Query 33505 AATTCGTCGACGCTCGCGTAACCCAGGCGTTTCCAGTGATACGCCATGATCTGGAACGCG 33564
||||| | ||||| | ||| || || || ||||| ||| | |||| |||||||| |||
Sbjct 4976 AATTCCTGCACGCTTGTGTATCCGAGACGATTCCAATGAAAGCCCATAATCTGGAAAGCG 5035
Query 33565 CCCCAGCTCGCGGACTCGTAAGCGGATGCCGCATCGAT---GCGCGCCGCGGTGTCGAGC 33621
|||||| || ||||| | |||| | ||||||| ||| ||| | | ||
Sbjct 5036 CCCCAGGAAGCCGACTCCAAGGCGGCGGTGTCATCGATCAGGCGGGCCATAG---CTAGT 5092
Query 33622 CGCACGTATTCGGCGGCGCCGCCCTGGTAGCCGCCGCGCTTCGGGTTGACGA 33673
|| || |||||||| |||||| ||| || ||| | |||||||||||||
Sbjct 5093 CGTTGGTGTTCGGCGGTGCCGCCGATGTATCCACCGGGTTTCGGGTTGACGA 5144
>seq3088488
Length=17142
Score = 387 bits (428), Expect = 3e-103
Identities = 1474/2275 (65%), Gaps = 119/2275 (5%)
Strand=Plus/Plus
Query 22282 CTACGTATCCGGGCGCGCTCGCGCCAGTCCATCAATTCGGCCAGGGAGAAGGCGGCCATA 22341
|| |||| || |||||| |||||||||||||||| || |||| || |||||
Sbjct 14392 CTCCGTACCCTGGCGCGTTCGCGCCAGTCCATCAGGTCTTGCAGGCCCAACTGATCCATA 14451
Query 22342 TCGCGCGGCGTCCAGCCAAACACCGTCGCGATATCGGCCATCGCGTCTTCTACGCGGGCC 22401
|| ||| | |||| ||| ||| || | ||||||||| ||||| ||||||||
Sbjct 14452 TCAGCCGGTGCCCAGTGAAAAACCACAGCCAGATCGGCCATGGCGTCCTCTACGCGACGA 14511
Query 22402 GGGATTCCATGCTCGCTTTCAGCGCCTTCGGCATCAAAAAACCGGCGAAGATACCCCCCA 22461
||||| | || | | ||| || |||| ||| ||||||||||| || | | | ||
Sbjct 14512 GGGATGC-ATCC--GTCTTCGCCGACTTCTGCAACAAAAAACCGGAGATTTTGCTGCTCA 14568
Query 22462 ACGCCACGAGGTCGGCCGGGTCCATGCCGGCCACGTCGAACTCGGTCAGCGTCGGCGTGC 22521
|||| ||||||||||||||||||||||| || |||| |||| || | |||||||
Sbjct 14569 GGGCCAGTAGGTCGGCCGGGTCCATGCCGGCGACTTCGACGACGGTGAGGCTTGGCGTGC 14628
Query 22522 TGATGCGCGGCAACACCTTGCGCAGCGCGTCGACATCGAGATTCACGAGTGCGGCGAGCG 22581
|||| ||||||| |||||| ||| | ||||||| | | || || | | ||
Sbjct 14629 TGATACGCGGCAGAACCTTGATCAGGCTGGCGACATCCATCTGCAGCAGCTCTACCAGGC 14688
Query 22582 ACGTGCCGCGCAGCGCGCCCGCGGCCGGCTTGCGCAACGTCAC-CTGCGTGATGGTC-TG 22639
| |||||| | | |||| | | |||||||||| || | ||| ||||| | ||
Sbjct 14689 TCACGCCGCGTAACTCGCCGGAGTTGGGCTTGCGCAGTGTGATGCTGT-TGATGCTGGTG 14747
Query 22640 CCCTTCGCGCTCGATCGGTGTGTCGAGCGTGTGCGTGTTCTCGTCGGGC-GCGGCGTG-- 22696
| |||| ||||||||| ||||| || ||||||||||||| | || || ||
Sbjct 14748 GTCC-CGCGACGGATCGGTGTATCGAGAATGACGGTGTTCTCGTCGGCCAGCTGC-TGCA 14805
Query 22697 -GCCAGCCGTTTCGATATGAGCGGTGTCGATGGTCGTCATGGTGTT---TCCTGGGTTGG 22752
| ||| |||| | ||| ||| | | |||| | || |||||| |
Sbjct 14806 CGTCAGGTTGTTCGGT------GGTTTCGTT---CTTCATTGGATTCGCTCCTGGT---G 14853
Query 22753 ATGTGAAATTGGAATGGCCCGCGCTCGACGCGGGCGTCGATTACAGGCCCATCGCGCGGC 22812
|| ||| | ||| | | |||| | | ||| | | | | |||||| || ||
Sbjct 14854 ATT--AAAGGGTGATGATC---GATCGAGG-GTGCG--GGTCAGATGCCCATGCCGTTGC 14905
Query 22813 GAAGGTCCGACGCGAGGTCCATGCCGTTGATCTTCTCGACCGCGTTCACGAAGTCGAGCT 22872
| | | | | | ||||| ||||||| ||||||||| ||| | | |||| ||
Sbjct 14906 GGTGCTTCTCCAGCATGTCCACACCGTTGACCTTCTCGACAAAGTTGAGCAGATCGATCT 14965
Query 22873 CGATGAGGTCGCGCCCGTTCACGGTCAGCTTGTAGTAGCTGGCGTTGGTCGTGATCTTGA 22932
|||||| || || | ||||||||||||||||||||| | |||| || || |
Sbjct 14966 CGATGATTTCTTCGCCATCTACGGTCAGCTTGTAGTAGCTGCAGGTGGTGGTCATGGAGT 15025
Query 22933 ATTTAGTGTCTTCCTTCGCCTTCGCGGTGCCCATGTCGATCTCTTCGTGGCGGCCCTTCA 22992
|| |||||| || | || || |||||| ||||| |||||| ||||| ||
Sbjct 15026 GTTCAGTGTCCTCGCCGGGCTGGGCATCGCCCATCTCGATGGTTTCGTGACGGCCACGCA 15085
Query 22993 CTACCACTTCGATCTGGTCGTGCTTCT--TGCTGTCCTCGCGACGATAGCCGCCGGCGAA 23050
| |||||||| | | | | |||| || |||| || | | || ||| | |||
Sbjct 15086 CAACCACTTCCACATTGCTGA-CTTCGCCTG-TGTCGTCTTGCTGGTAAGGGCCAGAGAA 15143
Query 23051 GCGCAGCAGCACGCCGTCGTGCTGCACGGCGCCGTACTGTTCGAGC-ACTTC-GACCATG 23108
||||| ||| | | | | || |||||| |||| || | || || | |
Sbjct 15144 TCGCAGGGCCACACTGGAGGCGTTGACCGCGCCGAACTGACGCAGAGAGATCAGATC--G 15201
Query 23109 AAGCCGCCGCACGTCCACTCGAGCTGGA-GC--TCTTCGC---TGCCGTAGTCGATTTTC 23162
| ||| ||| | |||| |||| ||||| || || ||| |||| ||| |||
Sbjct 15202 AGGCCACCGGTCTTCCATTCGAACTGGATGCCGTCGTCGGACATGCCCAGGTCAGCTTTG 15261
Query 23163 ACGGGGCCGGTCATGCCGCTGCCCTGCCACGCTTCCATCTTGCGCTTGAGCTTCGGAAGA 23222
|| ||||| ||||||||| ||| | |||||||||||||||| ||| || ||
Sbjct 15262 ACCGGGCCATTCATGCCGCCGCCGCGATACGCTTCCATCTTGCGGCCGAGGGAGGGCAGG 15321
Query 23223 TTGAGCT-CTTCGACTTCGCCGACGAAGTTCGCGCCGTTGTGAAAGACGTTGAAGCCCTT 23281
|||| |||| || ||||| || | ||||| | || | ||||| | ||
Sbjct 15322 GTGAGGGACTTC-ACCAAGCCGAGATAGCTGTTGCCGTCATTGAACAGGTTGAGGTTTTT 15380
Query 23282 CAGTTTTCGAGGCATACCCATTGCATTTGACTCC--------TGTT-------AGCCCGC 23326
|| || |||||||| |||| || | |||| |||| | | | |
Sbjct 15381 GAGCTTGCGAGGCATTGCCATGGCGGTGTTCTCCGGGATACGTGTTCAGGGTGAACTCCC 15440
Query 23327 CACGCGCG-----CCGG----------------------GAAATCGGCGAGGAAGCGGTC 23359
| |||| | |||| ||| ||| ||| | |||||
Sbjct 15441 CTCGCGGGGAGACCCGGTTTAGCTGCTGATGCCCTTGGCGAAGTCGATCAGGTAACGGTC 15500
Query 23360 GGTGATGCGCTGGCGCAGCACCAGATTTTCGAGAGGCGGAACCGGCGTGTAGTCATAATC 23419
|||||| |||||||| | || | ||| || ||||| || || |||||||| |||||
Sbjct 15501 GGTGATTCGCTGGCGGAAGGTGAGGTCTTCAAGTGGCGGCACGGGGGTGTAGTCGTAATC 15560
Query 23420 GATGTACGCCTTGCCGGACGCGAGAATGTCGGCCGTGTTC--GGC-TCCGGATCGATCCA 23476
| | |||||||| | ||| |||| ||||| | | ||||| | ||||
Sbjct 15561 AAGCCAGAGCTTGCCGGCCTTGAGGGTGTCTTTGGTGTTGATGTCGTCCGGGT---TCCA 15617
Query 23477 CGCGCTACCGCCGATCAGGTAGCCGTTCGCGACCTGCTGCCGAAACCAGCCGTTGATGCT 23536
|| ||||||||||||||||| | | | || || | | | || | | ||
Sbjct 15618 GCAACTGCCGCCGATCAGGTAGCCCTGGGATTTCAACTCGCGCATCTTGGCGCTTACGCC 15677
Query 23537 TTCCACGATGTCGCGCGCGAGCGACGGATTCAGCGGGCCGTCGACGACGGGCATCTGCGC 23596
||| || | |||||| | || || | | || |||| ||| || | ||| |||||
Sbjct 15678 TTCGACCAGGTCGCGTACCAGGGAGGCGTGCATAGGGCGGTCAACTGCCCACATGTGCGC 15737
Query 23597 TTCGGCGATCGAATCGGCGGCCACCTGAGCGGTGCGCGTGTAGTTCTCGAACGCGAACTT 23656
|||| | || | || ||| | ||| |||||||| |||||||| ||||| ||||||
Sbjct 15738 TTCGCCCATGGTGTCCGCGAGGATCTGCGCGGTGCGGGTGTAGTTTTCGAAGGCGAACAA 15797
Query 23657 CGGATCGTCCGAGCACGTGCGCTCGCCCCAGAACCGGAAGCCGTTGCGGTTCACGAGCGT 23716
||| || || ||| ||||| |||||||| || || |||||| ||| | || ||
Sbjct 15798 CGGGTCATCACTGCAGGTGCGGCTACCCCAGAAGCGAAAACCGTTGGCGTTGATCAGGGT 15857
Query 23717 CGTCACTTCGT-GCTCGTTCAGGTAGCCCGCATCGGTCGCCGGGTCCTGCAAATCCCACG 23775
|| || |||| ||| ||| |||||| || ||||| || |||| |||| ||||||
Sbjct 15858 GGTGACGTCGTTGCT-GTTGAGGTAGTTGGCGTCGGTGGCTGGGTTTTGCAGATCCCAGA 15916
Query 23776 ACACGTCGGCGCTGATGCCGGACACGCCGTTCACGACGACATTCGAAATCGTCTTGTGCC 23835
|||||||||||||||| |||| |||||| ||||| | || || || | || || ||||
Sbjct 15917 ACACGTCGGCGCTGATACCGGTCACGCCACTCACGGCCACGTTGGACAGGGTTTTATGCC 15976
Query 23836 AGCCGATGTCGTTGTCGATCTTCGCGCGCAAGCCGGCGGCGATCGCCGGCGCCGGGATGA 23895
| || | || | ||||||||| ||||| | |||| |||| ||| |||| |
Sbjct 15977 AACCCGTCTCTTGGTCGATCTTGGCGCGAAGGCCGAGGGCGCGGGCCACGGCCGAAGCGC 16036
Query 23896 CGGCCGTCGAGTTCGTCGTGTCGTCCCAGCCGAGCCAGTCCGGCCAGATCACCATGATTT 23955
||| ||| ||| || ||||||| || |||||||||| |||||||| ||||
Sbjct 16037 TGGCGGTCTTGTTGGTGACAGTGTCCCAGTTCAGGAAGTCCGGCCAAATCACCATCATTT 16096
Query 23956 CGCGTTGGCCGAACTGCCTGCGGTACGCGGCGGCTTCTTCCTTCGTCTTGCAG--CCGGA 24013
|||| ||||| | | ||||||||| | | |||||||| || |||||| || |
Sbjct 16097 CGCGGGCACCGAAGTTCTCGCGGTACGCCACTACCTCTTCCTTGGTTTTGCAGTTCCAGG 16156
Query 24014 CGCCGACACATAGGCCATCGCGCGCAGCGACTGCGCGGTCGCCGCGAGCGCGGCCGCGAC 24073
||| || || || | |||||||| | ||| | || |||| |||| || ||
Sbjct 16157 CGC--TTACGTATGCAAAGGCGCGCAGGTCTTTGGCGATGGCGCCGAGGGCGGTGGCTAC 16214
Query 24074 CGGCTGCGTATCGAGGCCGGGCGCGGCGAGAATGCGCGGCTTCACGCCGA-GCGCACCCT 24132
||| | |||||||| ||| || | || || ||||| ||| ||| | ||| |
Sbjct 16215 TGGCAAACTGTCGAGGCCTGGCACGCCAAGGATACGCGGAGTCATGCCCACGCGTGATTT 16274
Query 24133 GCGCGGCGAGCAGCGCCTTGATGCCCGTGTACTTGCCGTCCGGCGTCACGGTGCCGAT-- 24190
| || |||||||| || || ||||| ||||| | ||| || || ||| ||
Sbjct 16275 G-GCTGCGAGCAGAGCTTTCATGCCGGTGTATTGACCGGTTGGTGTTGTACCGCCAATCA 16333
Query 24191 -GACGTTCGAGGTCGTCTCGTCGGCGTCCTTGCCTTCGGCGACGCGCACGACG--ACGGT 24247
| || ||| |||||| | | |||| |||||| ||| || || ||| | ||
Sbjct 16334 GGGCGCTCGTAGTCGTCGCTT---CGTCAGCGCCTTCTTTGACCCGTACCACGATAACGT 16390
Query 24248 CAGCGGCTTCGTCTGCTTGCCGATCGCGT-CGAGCGTGCGGCGCAGCGTGCCTTTCTTGC 24306
| ||||| ||||| | | |||| | | | || || || ||| ||||| || ||
Sbjct 16391 AA--GGCTTGGTCTGGTCGGCGATGCCTTGCAGGCTGGCAGC-CAGGGTGCCCTTGACGC 16447
Query 24307 CGGCCTTGCCGAGCGCGGCGACGACGTTCGTCAGCAGCACGGGCGTATTGAGCGGAAACG 24366
|||||||||||| |||| ||||| || | || || || || | || || ||
Sbjct 16448 CGGCCTTGCCGACGGCGGTTTGCACGTTGGTGATGAGGACTGGAGTGTCCAGAGGGAAAA 16507
Query 24367 CGCTCGCGTCAGCGTCGGCCGCCGTGCAGACGACGCCGAGCACGGCCGTCGACACTGAGC 24426
|| | ||| || || | || ||||| || | ||||| || || || | | | ||
Sbjct 16508 CGAGTGGGTCCGCATCTTCAGCGGTGCAAACCATGCCGATGACTGCGGTGGGAATAGTGC 16567
Query 24427 GAATCGGGCGGCCGCCTTCGTTGATTTCGATGACGCGTACGCCGTGGTGGTAATC 24481
|||| |||||| ||| ||||||| ||||||||| || ||||||||| | |||||
Sbjct 16568 GAATGGGGCGGGTGCCGTCGTTGAGTTCGATGACCCGCACGCCGTGGAGATAATC 16622
>seq3063309
Length=1409
Score = 80.6 bits (88), Expect = 6e-11
Identities = 410/645 (64%), Gaps = 24/645 (4%)
Strand=Plus/Plus
Query 3194 CGCAACATCCTGAAATCGCGGCAGATCGGTGCGACGTGGTACTTCGCGCGCGAGGCGCTC 3253
||||||||||||||| || ||| | || ||||| |||||||| |||| ||| ||
Sbjct 3 CGCAACATCCTGAAAAGCCGCCAGGTGGGCCTGACGTACTACTTCGCCGGCGAAGCGTTC 62
Query 3254 GTCGACGCGCTCGACACCGACCGCAATCAGATCTTCCTATCGGCCAGCAAGGCGCAGGCG 3313
| ||||| | |||| | ||| ||| | ||||| ||||||||| ||||| ||
Sbjct 63 ATGGACGCCGTGCTGACCGGCGACAACCAGGTGTTCCTGTCGGCCAGCCGCTCGCAGTCG 122
Query 3314 CACGTCTTCAAGCA-ATACATCACGCAGTTCGC-GCGCGATGCCGCCGACGTCGAGCTCA 3371
| | ||| ||| ||||||| ||||| || || || |||| ||||||| |
Sbjct 123 GAAATTTTC-CGCAGTTACATCATCCAGTTTGCAAAGCAGTG-GTTCGACATCGAGCTGA 180
Query 3372 CGGGCGACCCGATCATCTTGCCGAGCGGTGCGACGCTGTACTTCCTGGGGACGAACGCGC 3431
| ||| ||||||||| | | ||| || |||| ||| || ||| ||
Sbjct 181 CCGGCAACCCGATCACGCTCAGCAACGGCGCCGAGCTGCGTTTCTTGTCGACCAATAGCA 240
Query 3432 GTACCGCGCAGTCGTATCACGGCAACTTCTATTTCGACGAATACTTTTGGGTTCCGAAGT 3491
| ||||| ||| || || ||| || |||| |||| || || |||||| | | | |
Sbjct 241 GCACCGCCCAGGGCTACCATGGCCACGTCTACGTCGATGAGTATTTTTGGATACGTGACT 300
Query 3492 TCCGCGAGTTGAACAAGGTTGCGTCGGGCATGGCGATGCACAAGCGCTGGCGCAAGACCT 3551
|| | | | | || || || | ||||| | |||||| |||||||| ||||
Sbjct 301 TCGACAAACTCAGCACCGTGGCCAGTGCCATGGGCACCCACAAGAAGTGGCGCAAAACCT 360
Query 3552 ACTTCAGCACGCCGTCGAGTGTCACGCACGAGGCGTTCGCGTTCTGGAGCGGCGCGCA-- 3609
|||| ||||| ||| ||||| | |||| | |||||||| |||| | |
Sbjct 361 ACTTTTCGACGCCCAGCGCAGTCTCGCACCAAGCGTACCCGTTCTGGTCGGGCGAGGAAT 420
Query 3610 --CGCGAACCGCGGCCGCGCC--GCGGGCGAGCGCATCCAGATCGACACGAGCCACGAGG 3665
||| ||| || |||| | | ||| ||| || | | || |||||
Sbjct 421 TCCGC-AACAGCAAGCGCGGCAAGAAGGCCGGCGGCACCTGGCCCAC--------CGAGG 471
Query 3666 CGCTCGTGCGC----GGCATGTTGTGCGAGGACGCGCAGTGGCGGCAGATCGTGACCGTG 3721
|| || | | | ||| |||||| |||| || ||||| | | | | ||| ||
Sbjct 472 CG-TCATACACCCAGGGCGCATTGTGCCCCGACGGCCAATGGCGCAAAACCATCACCCTG 530
Query 3722 CTCGACGCGATGGCGGGCGGCTGCAACCTGTTCGACATCGACGAGCTGCGCCGCGAATAC 3781
|||||| || || ||||||||| | ||||||||| |||| | |||| | || |||
Sbjct 531 GACGACGCCATAGCCGGCGGCTGCGATCTGTTCGACCTCGAGCAACTGCAGCTGGAGTAC 590
Query 3782 AGCGCCGAGGAATTCGCGAACCTGCTGATGTGCCACTTCATCGAC 3826
|| || ||||| | | ||| | ||| | |||||||||
Sbjct 591 GACGAAGACAAATTCCAGCAGCTGTTCTACTGCAAGTTCATCGAC 635
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 110059373887146
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |