Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_009382.1
Length=38760
Score E
Sequences producing significant alignments: (Bits) Value
seq3088488 540 2e-149
seq3088503 439 6e-119
seq3063309 181 3e-41
seq3053335 136 9e-28
>seq3088488
Length=17142
Score = 540 bits (598), Expect = 2e-149
Identities = 755/1043 (72%), Gaps = 28/1043 (3%)
Strand=Plus/Minus
Query 18994 TTCCCGCTCGACACCCCCGTCCTGCTGACCAACCCGCAGGCCTACATCGGCAAGGCCGGC 19053
||||| || ||||| || ||||| | |||||| ||| || | ||||||||||||||
Sbjct 16505 TTCCCTCTGGACACTCCAGTCCTCATCACCAACGTGCAAACCGCCGTCGGCAAGGCCGGC 16446
Query 19054 GACAAAGGCACGCTCGCCCACACGCTCGACGCCATCACCGACCAGACCAACCCGCTCACG 19113
| ||| ||||| || || || || | | |||| ||||||||||||| || | |||
Sbjct 16445 GTCAAGGGCACCCTGGCTGCCAGCCTGCAAGGCATCGCCGACCAGACCAAGCC--TTACG 16388
Query 19114 GT--CGTGGTGCGCGTCGCCGGCGGTGCTTCCGAGGCCGAGACCACGTCCAACCTGATCG 19171
| |||||| || ||| | || ||| ||| || ||| ||| | |||||| |
Sbjct 16387 TTATCGTGGTACGGGTCAAAGAAGGCGCTGACGAAGCGACGACTACGAGCGCCCTGATTG 16328
Query 19172 GCACCACCAACGCGGCCGGCCGGTACACCGGCATGAAGGCGCTGCTGACCGCCCGCAACC 19231
|| || | | |||| | |||||||||||||| || ||||| | ||| |
Sbjct 16327 GCGGTACAACACCAACCGGTCAATACACCGGCATGAAAGCTCTGCTCGCAGCCAAATCAC 16268
Query 19232 GTTTTGGCGTCGCGCCGCGCATCCTGGCTGTGCCGGGGCTCGACAGCCTGCCAGTCGGGA 19291
| | ||| | | ||||| ||||| | ||||| || |||||||| ||||||| | |
Sbjct 16267 GCGTGGGCATGACTCCGCGTATCCTTGGCGTGCCAGGCCTCGACAGTTTGCCAGTAGCCA 16208
Query 19292 CCGAGCTGGTCACCATCGCGCAGAAGCTGCGCGCCTTCGCCTACCTGTCGGCGTACGG-- 19349
||| || | | ||||||| | | ||||||||||| || ||| || ||| ||
Sbjct 16207 CCGCCCTCGGCGCCATCGCCAAAGACCTGCGCGCCTTTGCATAC--GTAAGCGCCTGGAA 16150
Query 19350 CTGCCAAACCAAGGAAGAGGCCGTCGCCTACCGCAGCAACTTCGGCCAGCGCGAAGCGAT 19409
|||| ||||||||||||||| || || |||||| |||||||| |||||| |||
Sbjct 16149 CTGCAAAACCAAGGAAGAGGTAGTGGCGTACCGCGAGAACTTCGGTGCCCGCGAAATGAT 16090
Query 19410 GGTGATGTGGCCGGATTTCGTCGGCTGGGATACCGCCGCCAATGCCGAGACCACC----C 19465
|||||| |||||||| ||| | |||||| || | | |||| | ||||| || |
Sbjct 16089 GGTGATTTGGCCGGACTTCCTGAACTGGGACACTGTCACCAA---CAAGACCGCCAGCGC 16033
Query 19466 TGTGGGCCACGGCCCGCGCGGTCGGCTTGCGCGCCAAGATCGACAACGACACCGGCTGGC 19525
| | |||| ||||||||| ||||| | ||||||||||||||| | || || || ||||
Sbjct 16032 T-TCGGCCGTGGCCCGCGCCCTCGGCCTTCGCGCCAAGATCGACCAAGAGACGGGTTGGC 15974
Query 19526 ACAAGACGCTTTCCAACGTGGCGGTGGGCGGCGTGACCGGTCTGTCGCGC-GACGTGTTC 19584
| || || || ||||||||||| ||| | |||||||||||| | |||| |||||||||
Sbjct 15973 ATAAAACCCTGTCCAACGTGGCCGTGAGTGGCGTGACCGGTATCA-GCGCCGACGTGTTC 15915
Query 19585 TGGGACCTTCAGGACCCGGCGACCGACGCGGGCTACCTGAACGCCAACGAGGTGACCACG 19644
||||| || || |||| || |||||||| |||||| ||| |||||| || |||||
Sbjct 15914 TGGGATCTGCAAAACCCAGCCACCGACGCCAACTACCTCAACAGCAACGACGTCACCACC 15855
Query 19645 CTGGTTCACCGCGACGGCTACCGCTTCTGGGGCTCGCGCACGTGCAGTGCGGATCCGCTG 19704
||| | || | |||| | ||||||||||| ||||| ||||||| || ||| ||
Sbjct 15854 CTGATCAACGCCAACGGTTTTCGCTTCTGGGGTAGCCGCACCTGCAGTGATGACCCGTTG 15795
Query 19705 TTCGCCTTCGAGAACTACACCCGCACCGCGCAGGTGCTGGCCGACACCATGGCGGAAGCA 19764
||||||||||| ||||||||||||||||||||| | || || |||||||||| |||||
Sbjct 15794 TTCGCCTTCGAAAACTACACCCGCACCGCGCAGATCCTCGCGGACACCATGGGCGAAGCG 15735
Query 19765 CACATGTGGGCGAACGACCTACCGATG-ACGCCCACCCTCGTGCGCGATCTGCTGGAGGG 19823
||||||||||| |||| || ||| ||| || |||| || ||||| ||| | || ||
Sbjct 15734 CACATGTGGGCAGTTGACCGCCCTATGCACG-CCTCCCTGGTACGCGACCTGGTCGAAGG 15676
Query 19824 CATCAATGCCAAGTTGCGCATGCTGACCCGCAACGGATACCTGCTGGGCGGC-GCCGCGT 19882
| | | |||||| ||||| | ||| | | || |||||| | |||||| | || |
Sbjct 15675 CGTAAGCGCCAAGATGCGCGAGTTGAAATCCCAGGGCTACCTGATCGGCGGCAGTTGC-T 15617
Query 19883 GGTTCGACGCGGACG---CCAACAGCAAGGACACGCTGAAGGCCGGGCAACTCGCCATCG 19939
|| || |||||| ||||| ||| ||||| || |||||||| | ||| | |
Sbjct 15616 GG---AACCCGGACGACATCAACACCAAAGACACCCTCAAGGCCGGCAAGCTCTGGCTTG 15560
Query 19940 ACTACGACTACACGCCCGTCCCACCTCTGGAGAACCTCACGTTCCGCCAGCGCATCACCG 19999
| ||||||||||| ||||| || || || || ||||||| ||||||||||| |||||||
Sbjct 15559 ATTACGACTACACCCCCGTGCCGCCACTTGAAGACCTCACCTTCCGCCAGCGAATCACCG 15500
Query 20000 ACCGCTACCTGATGCAGTTCGCC 20022
|||| |||||||| | ||||||
Sbjct 15499 ACCGTTACCTGATCGACTTCGCC 15477
Score = 87.8 bits (96), Expect = 4e-13
Identities = 98/131 (75%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 20729 ATCACCGTGCGCAAGCCGGGCGCCGGCGAGCTGCGCGGCGTGAGCCTGATGGACCTGATG 20788
||||| |||||||||| | |||||||| | ||||||||||||||| | || ||| ||
Sbjct 14731 ATCACACTGCGCAAGCCCAACTCCGGCGAGTTACGCGGCGTGAGCCTGGTAGAGCTGCTG 14672
Query 20789 CGCATGGACGTGACTGCCCTGCACACGGTTCTGCCGCGCATCACCACGCCGACGCTGACC 20848
| ||||| || | |||| || |||||||||||| |||| |||||| | || |||
Sbjct 14671 CAGATGGATGTCGCCAGCCTGATCAAGGTTCTGCCGCGTATCAGCACGCCAAGCCTCACC 14612
Query 20849 ACCGCCGATGT 20859
|| ||| ||
Sbjct 14611 GTCGTCGAAGT 14601
>seq3088503
Length=21467
Score = 439 bits (486), Expect = 6e-119
Identities = 994/1493 (67%), Gaps = 25/1493 (2%)
Strand=Plus/Minus
Query 4173 CATGAACGACGCGGCGAAGTCCGTCCAGCCGGCGTCGAACTCCAGCCTGCCCTTGCTGAT 4232
||| | |||| || | ||| ||||| ||||||||||||||||||| ||| || |||
Sbjct 11369 CATCATCGACTGCGCCATGTCGGTCCACCCGGCGTCGAACTCCAGCCGGCCGTTATGGAT 11310
Query 4233 CACGTCGTGCGCCTTGAGCACCAGGGCGGTTTTCACGTCCACGGAATAGGTGAAGCCTTC 4292
|||||| | ||||| ||||||||| ||||| || || |||||| |||||
Sbjct 11309 CACGTCATAGGCCTTCAGCACCAGGCGTGTTTTGACTTCGGGCGAATAGCTGAAGGTGGT 11250
Query 4293 GGCATCCGGACGGAACTTCTGCACCAG--GCGGAACACCGCATCGCCGATGCCGGTCCGG 4350
|| |||| ||||| ||||||| ||| || |||| | | | |||||
Sbjct 11249 CACAGCCGGGAAGAACTGGCGCACCAGCTGCGCCACGCCGCTACCCAGC--CCGGTGACA 11192
Query 4351 TCGATGCCCACGTAGGCGACGTCGTAGCGCTCAGCGACGCGCCGGATGGCGCCGGCCTGT 4410
|| || || | |||| || |||||| || |||| ||| | |||||
Sbjct 11191 TCAATCCCGATATAGGTCACCCAGTAGCGGTCGCAGACGTTTTTGATAAATGCCGCCTGG 11132
Query 4411 TCCTCGTAGTCGATGCCGCGGAACTGGTGCCGCTCCAGCACGCGGAACTTGCCGCCCGGT 4470
|| | |||| ||||| ||||| |||||||||||||| |||||||| ||||||||||||
Sbjct 11131 GCCGCAAAGTCCATGCCCCGGAATTGGTGCCGCTCCAGGACGCGGAATTTGCCGCCCGGT 11072
Query 4471 ACCAGTGGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGGGGTCG 4530
||||| |||| ||||||
Sbjct 11071 ACCAGCGGCGGCGCAACCACCACCAGCCCGGAGCAATCACCGGTTTCCGCT---GGGTCG 11015
Query 4531 TAGCCGACCCACACCGGCCGGTTGCCGAACGGCCGTGGCGCGAACGGCCGGAAGTCTTC- 4589
||||||| ||| ||| | |||| ||||||||||| ||||| ||| | |||| ||
Sbjct 11014 TAGCCGATCCATACCTGACGGTCACCGAACGGCCGCATGGCGAATGGCTTGTAGTCCTCT 10955
Query 4590 --CCATACCTCCCAACTGTCCACCATCCCGCGCATGAGCATCGCGAGCGGAAACACCGAC 4647
|||| | |||||||||| ||||| | || | |||| ||| | |||||| |
Sbjct 10954 GCCCATTCAACCCAACTGTCGACCATGCAGCTCTGCAGCAACGCCAACGGAAAGATGCTG 10895
Query 4648 GCGTTGTCGTCGATGAATACGCACATGAGCAGGTTGGCGAAATCGAGTTCGCTGTACTCC 4707
|| ||||| | || | ||||| | |||||||||||| | ||||||||||
Sbjct 10894 GCTCCATCGTCAACAAACTCACACATCAACAGGTTGGCGAACGCCTCAGGGCTGTACTCC 10835
Query 4708 AGGCGCAGCTGGTCGAGGTCGAACAGGTTGCAGCCGCCGCGGAGCGCATCCTCCACCGTC 4767
| |||| || || | ||||||||| | ||||||||| | || ||| | ||
Sbjct 10834 CGACGCAACTCCTCAATGTCGAACAGATCACAGCCGCCGTGCTCTGCGTCCAGGATGGTG 10775
Query 4768 ACGATTTGGCGCCACTGGCCGTCCGCGCAGCGCATGCCGTCGCGAAGCGCGGCGTGGCTC 4827
||||| || |||||| | |||| ||||| | || | | ||||| |||||
Sbjct 10774 ACGATCTGCCGCCACAACCGGTCCTCGCAGAACCGCCCCTGTTGGAGCGCCCCGTGGGAA 10715
Query 4828 AGGTCGAGCTTGATCTGTTTGTCCTTGGCCTTGCCGCGGTTGAACAGTGCGCCGGACCAG 4887
| ||||| |||| | |||| || | ||| || |||||| | |||||| ||||
Sbjct 10714 ACGTCGACCTTGGTGTGTTGCGCCGCTGGCTTACCCTTGTTGAAGCGCTCGCCGGTCCAG 10655
Query 4888 AACGGATAGGCCTCATGCGACAAGCTGGACGGCGTGGAGAAGTAGGTCTGACGCCAGTGC 4947
|| | ||||||||||| | || |||||||||||| ||||||||||| | ||||| | |
Sbjct 10654 AAGGTGTAGGCCTCATGGGCCATGCTGGACGGCGTCGAGAAGTAGGTTTTGCGCCACTTC 10595
Query 4948 TTGTGGATCGCCATGCCGGAGGCGACCTTGCGCAGTTCCTGGAAGCGCGGCACCCAGAAG 5007
||||| || |||||||| || ||||||||| |||||||| || | |||||||
Sbjct 10594 TTGTGCATGGCCATGCCCGAAGCGACCTTGTTCAGTTCCTCAAACTTGAACGTCCAGAAG 10535
Query 5008 TATTCATCGAAGTACAGGTTGCCGTGATACGACTGCGCGGTGCGGGCGTTCGTGCCGAGA 5067
|||| |||||||| | |||||||| || ||| ||||| || || || || |||||
Sbjct 10534 AATTCGTCGAAGTAGAAATTGCCGTGGTAGCCCTGGGCGGTACGCGCATTGGTACCGAGG 10475
Query 5068 AAGTAGAGCGTGGCGCCGTTGGGCAGCACCATCGGATCGCCCTTCAGCTCGATCCCGGCC 5127
|| | ||| |||||||||||||| || || ||||| ||| ||||||||| |||
Sbjct 10474 AAAAACAGCTCGGCGCCGTTGGGCAATACGATGGGATCCCCCGTCAGCTCGACACCGATA 10415
Query 5128 GCGTCCTTGGCGAACTGGAT-GATGTATTGCTTGAAGACGTGCGCCTGCGCCTTGCTGGC 5186
| || ||| || || | |||||| || | | || || || ||
Sbjct 10414 ACCTCACGGGC-AAATGCCTGGATGTACCCGCGAAACAGATAGGCTTGGTTTTTCGATGC 10356
Query 5187 CGATAGGAAAATCTGGTTGCGGCCGGTGGTCAGCGCGTCGATGAACGCCTCGCGTGCGAA 5246
|| ||||| ||||| ||||| ||||| |||||| || | ||||||||||| || ||
Sbjct 10355 GGACAGGAAGATCTGATTGCGCCCGGTTTCCAGCGCATCAAGAAACGCCTCGCGGGCAAA 10296
Query 5247 GTACCACGTCGCGCCGATCTGCCGGCTCTTGAGCAGGTTGCGGATGCGCTCGACCTGCCC 5306
||| | |||||||||||||||||||| ||||| | | ||| | || | || | ||
Sbjct 10295 GTAATAGGTCGCGCCGATCTGCCGGCTTTTGAGGATGACGCGAGTCCG-TTGA--TTGCC 10239
Query 5307 AGCCTCGTACCAGACGCGCTGGTAATCG-AACATCGAGTCGCGGAAGGCCTC---CAGGA 5362
|||| ||||||| | |||||| ||| |||| | |||| || || || || |
Sbjct 10238 AGCCCGGTACCAGTCTTTCTGGTAGTCGAAACAGC-CGTCGATAAACGCTTCACGCAACA 10180
Query 5363 GCTGCGTCTGTTCCTCGGGACTGATCGCATTGCGCTCGGGCTTGCTGCGCGGCCCCTTGT 5422
||| |||| || ||| ||||| | || || ||| | ||| |||| ||
Sbjct 10179 GCTCGATCTGCTCTTCG---CTGATATCGTTTTTTGGGGTCTTTTTCTTCGGACCCTCGT 10123
Query 5423 TGCGGTTCGCCACCTTCGGGTTCAGGTCGGTTTCGTTGCCGCTGGCCTCGTACCGGCGCA 5482
|||| || |||| || ||||| || ||||||||| | |||| | ||| | || | |
Sbjct 10122 TGCGTTTAGCCAGGTTAGGGTTGAGCTCGGTTTCGGTACCGCCGCCCTGAAAGCGCTGAA 10063
Query 5483 CGCGCGCCATGCGCTCCATTTGTCGGCCAAGCAGGTCGATTTCCTTGTAGTCCCGGCCTT 5542
| ||| ||| |||| ||| ||| ||||| || ||||||||| |||||| |||
Sbjct 10062 TTCTGGCCTGGCGTTCCAATTGGCGGTGCAGCAGATCAATTTCCTTGAAGTCCCCGCCGC 10003
Query 5543 CCTTCACCTCCTTGGCGACGAGCTGCGCCATGCGCTCTTCGATGCTGTTCGCC-ACGCGC 5601
||| |||||| || |||||| ||| ||| |||| | || |||| | ||||
Sbjct 10002 TCTTGCTTTCCTTGAGGATCAGCTGCACCAACCGCGCTTCCA-GCGCCCCGCCGATGCGC 9944
Query 5602 TCCACTGCATCCGCCGCGTCCCACCCATCGCGCCGCTTCCAGCTGTGCACCGT 5654
|| || ||||||| |||||| | || || |||||||||||| | |||
Sbjct 9943 TCGACGTTATCCGCCCGGTCCCAATCGTCTCGGGCCTTCCAGCTGTGTAGCGT 9891
Score = 421 bits (466), Expect = 2e-113
Identities = 1023/1545 (66%), Gaps = 23/1545 (1%)
Strand=Plus/Minus
Query 6818 ACAATGCGCAACGATACCCGCCGCCTCTTCGCGGCGTACAAGGCTGCAATCGCCAAGCTG 6877
|| ||||||||||||||||| | ||||| || ||| || | | ||||||||
Sbjct 8753 ACCATGCGCAACGATACCCGTACCGTCTTCAACGCCTACCTGGGCCAACTGGCCAAGCTC 8694
Query 6878 AACGGCGTGGAGCGCGTCGACGAGAAGTTCAGCGTCGCGCCGAGCGTCCAGCAGAAGCTG 6937
|| ||||| |||| | || || | ||| || |||||| || | |||
Sbjct 8693 CACAGCGTGCCCGACGTCACCACCAAATTTGCCACCGCCCCCAGCGTCACCCAAACCCTG 8634
Query 6938 GAGACCAAGGTTCAGGAGTCGAGCGACTTCCTGAAAAGCATCAACTTCTACGGCGTGCCC 6997
|| | | | | |||||||| || | ||| ||| ||||||| |||||||||| ||
Sbjct 8633 GAAAACCGGATGCAGGAGTCCAGTCAGTTCTTGAGCGCCATCAACATCTACGGCGTCGCC 8574
Query 6998 GAACAGGAAGGCGAAAAGATCGGCCTGGGCGTGTCCGGCCCGGTGGCAAGCACCACCGAC 7057
|| ||| ||||| || || ||| ||||| | ||| ||| || ||||||| ||
Sbjct 8573 GAGCAGATGGGCGAGAAAATTGGCATGGGCATCGGCGGGCCGAACGCCGGCACCACTGAT 8514
Query 7058 ACCAC--CCAGCAGGACCGGGAGACCTCCGACATTTCGACGATGGACGGTCGCCGTTATC 7115
|| | ||| | || || || ||| |||||| || | || | || | ||
Sbjct 8513 ACAAATACCA--AAGAGCGCGAAACCAGCGACATCAGCACACTCGATGACCGTGGCTACT 8456
Query 7116 GTTGCGAGCAGACCAACTCGGACACGCACATCACCTACCAGAAGCTGGACGCTTGGGCGA 7175
||| ||||||||||| || || ||| || ||| ||| |||| || ||||| |
Sbjct 8455 TCTGCTCGCAGACCAACTTCGATACCCACCTCCGTTACAGCAAGTTGGATGCGTGGGCCA 8396
Query 7176 AGTTCGCCGACTTCCAGACTCGCATCCGCGACGCCATCATCAAGCGCCAGGCGCTGGACC 7235
||||| ||||||||||| | || || || ||||||||| | || ||||||||||||||||
Sbjct 8395 AGTTCCCCGACTTCCAGGCCCGTATTCGTGACGCCATCCTGAAACGCCAGGCGCTGGACC 8336
Query 7236 GCATCATGATCGGCTTCAACGGTGTGAGCCGTGCCGCTACGTCGGACCGGGTGGCCAACC 7295
||||| ||||||| | ||||| || || || ||||| ||||| ||| | |||| |
Sbjct 8335 GCATCCTGATCGGTTGGAACGGCGTCAGTCGCGCCGCGACGTCCAACCCAGCCACCAATC 8276
Query 7296 CGATGCTGCAGGACGTGAACAAGGGCTGGCTGCAGAACCTGCGTGA-GCAGGCGCCGCAG 7354
| | | |||||||| |||| || ||||||||||| |||| | | | ||||||
Sbjct 8275 CACTTCGCCAGGACGTCAACATTGGTTGGCTGCAGAAGATGCGCGCCGAAAACGCCGCCC 8216
Query 7355 AGGGTGATGAAGGAAGGCAAGGCGGCCGCCGGCAAGATCACTGTCGGTGGCGCTGGCGCG 7414
| || |||||||||| | | | ||||||| ||||| |||||| || | |
Sbjct 8215 -GCGTCATGAAGGAAGTGGTCGAAGGCTCCGGCAAAATCACCATCGGTGCCGGTAAAG-- 8159
Query 7415 GACTATGGAAACCTGGACGCCCTGGTGTACGACATCACGAATCACCTGGTCGAGCCGTGG 7474
||| ||||| ||||||||||| | | ||| | | | | | | |||||||
Sbjct 8158 -ACTTCACCAACCTCGACGCCCTGGTATTCAGCATGGTGGAAGAGTTCATTGCGCCGTGG 8100
Query 7475 TACGCAGAGGATCCGGATCTGGTCGTTGTGTGCGGTCGCAACCTGCTGTCCGACAAATAC 7534
||| || || || |||||||| || | ||||||||| | |||||| ||||||| ||
Sbjct 8099 TACCAGGAAGACCCTGATCTGGTGGTGATCTGCGGTCGCCAACTGCTGGCCGACAAGTAT 8040
Query 7535 TTCCCGCTGGTGAACAGGGACCGCGACCCGGTCCAGCAGATCGCGGCCGACCTCATCATC 7594
|||||| | | |||| ||| || ||| | | | || ||||| || ||| |
Sbjct 8039 TTCCCGATCATCAACAAAGACAACGCGCCGACTGAAATGCTGGCCGCCGATATCGTCACC 7980
Query 7595 AGCCAGAAGCGCATCGGCAACCTGCCGGCCATCCGCGTGCCGTACTTCCCGGCGAATGGC 7654
|| || |||||| | ||||| |||| ||| | |||||||| ||||||||| || ||
Sbjct 7979 AGTCAAAAGCGCTTGGGCAATTTGCCAGCCGTGCGCGTGCCTTACTTCCCGCCGCGCGGG 7920
Query 7655 CTGCTGGTGACGCGCCTGGACAACCTGTCCATTTACTACCAGGAGGGCGGGCGCCGTCGC 7714
||||||| || ||||| |||||||| || |||| ||||| ||| | ||||| |||
Sbjct 7919 TTGCTGGTCACCAAGCTGGAAAACCTGTCGATCTACTGGCAGGAAGGCAGCCGCCGCCGC 7860
Query 7715 ACGATCCTGGACAACGCGAAGCGCGATCGCATCGAAAACTACGAGTCGAGCAACGACGCG 7774
|| || | ||||| || ||||| || ||||||||||||||||||||| ||| |||||
Sbjct 7859 ACCGTCGTCGACAATGCCAAGCGTGACCGCATCGAAAACTACGAGTCGGTCAATGACGCA 7800
Query 7775 TACGTGATCGAAGACCTGGCGTGCGCGGCCATGGCCGAAAACATCGCACTGGC----GGC 7830
||||| || |||||||||| || || | | || |||||||||| |||||| |||
Sbjct 7799 TACGTCATTGAAGACCTGGAATGTGCCTCGCTCGCTGAAAACATCGAACTGGCATAAGGC 7740
Query 7831 GGC--AGCATGACCAGCCCGGCTCGCAACCACTTCCTGCGCGTGACGGCCGCNNNNNNNN 7888
| | | |||||||| || || ||||| | || | || |||||
Sbjct 7739 GACCGACCATGACCAATCCTTGCCGTCGTCACTTTCAACGTATCACTGCCGCCCTGGAGG 7680
Query 7889 NNNNNNNNNNNNNNNNTTC-CAACCCGCTGCGCTACGCCACCGGCCAAGAGCTGATGCTG 7947
| ||| || || | |||||| | | |||| |||
Sbjct 7679 CGGCGGCCGTTGAACCGACTCAAACC-ATGGCCGGCGCCACGGCTTACGAGCACCAGCTC 7621
Query 7948 GCACAGCTGGCCGAGCACAAGCGTCAG---CTCAAGCAGGTGCAGTCCGTCGAGCGCAAG 8004
|| ||| | | || | || | | || || ||||||||||| | || ||||
Sbjct 7620 AACCAACTG--CTA-CAGGATCGCCTGCGCCTGAAACAGGTGCAGTCAAACCAGGGCAAA 7564
Query 8005 GCGGAGCTGAAGCGCAAGCTGCTGCCCGAGTACGCGGCCTGGGTCCGTGGCGTGCTGGAG 8064
|| || || |||||| | |||||||||| ||| | | |||| || |||||||||
Sbjct 7563 GCCGAACTCAAGCGCCAATTGCTGCCCGACTACATCCCTTATGTCCAGGGAGTGCTGGAG 7504
Query 8065 GCCGACACCGGTGCGCAGGACGAGGTCTTCATGACGGTCATGGTGTGGCTGATCGATGTC 8124
|||| || || || |||||||| | | ||||| ||||| |||| ||||||
Sbjct 7503 GCCGGTCAGGGCGCACAAGACGAGGTAATGACCACGGTAATGGTTTGGCGCTTCGATGCT 7444
Query 8125 GGCAACTTCGCCGACGCCCTGGAGCTGGCCACTTACGCCATCCGGCACAAGTTGGAGATG 8184
||| |||| | | || ||| || | ||||| |||| | |||||| ||| |||
Sbjct 7443 GGCGACTTTACGGGCGGCCTCGATATCGCCACCTACGTGCTGAAACACAAGATGGTCATG 7384
Query 8185 CCCGATCAGTACCAGCGCACCACGGCCTGCCTGATCGCCGAAGAGTTCGCCAACATGGCC 8244
|| || | | | ||||| || |||||| | |||||||| |||||| ||
Sbjct 7383 CCTGACCGATTCGCTCGCACGCTGGGGTGCCTGGTAGCCGAAGAAGTCGCCACGGCAGCG 7324
Query 8245 CTGAAGGGCATCGAGGCCGGCGATCCGGTGGACGTGACCACGCTGCACGAGGTGGCCGAG 8304
| |||| || | ||| ||| | ||| || | | |||||| ||| ||
Sbjct 7323 TTTAAGGCTCAGAAGATCAACGAGCCGTTCGACTTGGCAATCCTGCACCGCACGGCTGAA 7264
Query 8305 CTGGTCGCGGCCGAGGACATGCCGGACGAGGTGCGCGCCAAGCTG 8349
||| || |||| |||||||| ||| ||| ||||||||||||
Sbjct 7263 CTGACCGAATCCGAAGACATGCCCGACCAGGCACGCGCCAAGCTG 7219
Score = 196 bits (216), Expect = 1e-45
Identities = 255/348 (73%), Gaps = 10/348 (3%)
Strand=Plus/Minus
Query 3074 CCGAATCCGCCGGTGTTGTTCGGAATGATGCCCATGAGCTGCGGCGG--TACGCGGTGCG 3131
|| || || || | ||| | ||| | |||||||| |||||||| || ||||| ||
Sbjct 12423 CCAAAGCCCCCCGCGTTCTGCGGCACAATGCCCATCAGCTGCGGTGGAATACGCAA-GCT 12365
Query 3132 CGGCGAGCTGGTCGTCGCGCGTGACGTTCTTGAT---GTTCCAGAACTCGTCCTTCGCGG 3188
||| ||| ||||| || || ||| ||||| ||| ||| || ||||| || |
Sbjct 12364 -GGCTAGCACATCGTCACGGGTTTGGTTTTTGATCGAGTT---GAATTCATCCTTGGCCG 12309
Query 3189 CCACCTCGGACACCGGTAGCAACTGGATCCCATCCTTCTTGCCATTGGGCGCGTACATGA 3248
||||||| ||||| | || ||| ||||| ||||||||||| |||||| |||| |
Sbjct 12308 CCACCTCACTGACCGGGATCAGCTGTATCCCGTCCTTCTTGCCGGTGGGCGAATACACAA 12249
Query 3249 ACAGGTTGCGGAAATTGCCCGGCCCCTTGGCACTCTTCATCGCCTCGCGCAGCGTGTCGA 3308
||| |||||| |||||||| |||||||||| ||| | |||| ||||| | |||||
Sbjct 12248 ACAAGTTGCGAAAATTGCCTGGCCCCTTGGAGTCCTTGAGAGCCTTGCGCAAAGCGTCGA 12189
Query 3309 CGTCCTCCTGCTTCTGCGCCGCATCGGTCATGTACAGGATGAAGCCGGCGTGCGAGCCGT 3368
|| | |||| || |||||||||||||| || |||||||||||||| ||| |
Sbjct 12188 TATCGGTTTCAGTCTGTGCGGCATCGGTCATGTAGAGAATGAAGCCGGCGTGACTGCCAT 12129
Query 3369 TCTTGTAGTACCGGCGCCGGAACAGCGTGGCCGATTCGTTCAACCACG 3416
||| ||||||| ||| ||||||| ||||||||||||||| | | |||
Sbjct 12128 TCTCGTAGTACTTGCGGCGGAACAACGTGGCCGATTCGTTGAGCAACG 12081
Score = 134 bits (148), Expect = 3e-27
Identities = 157/211 (74%), Gaps = 6/211 (3%)
Strand=Plus/Minus
Query 9067 CGCCGCGATGCGCGCTGGGCAGTCAGCGACATCACCGGCGCTGCGCGCACCACCGTGGAG 9126
||||| ||| ||| ||||| || ||||| | |||| | |||||||||||||||
Sbjct 6536 CGCCGGGATCTGCGTTGGGCGGTTCGCGACTTTCTCGGCATCGGCCGCACCACCGTGGAG 6477
Query 9127 CTGATCTGATG-----CGC-GTGCGGGCGATCCAGGGCGACACCATCGACGCCATCTGCC 9180
|||||||||| ||| || || || | ||| ||||||| ||||||| | |||
Sbjct 6476 TTGATCTGATGGCCGTCGCCGTTCGCGCCAACCAAAACGACACCGTCGACGCGCTTTGCT 6417
Query 9181 GGCGGGTCTACGGCCGCACGGCGAGCGTGACGGAAGCCGTGCTGGCCGCCAACCCCGGCA 9240
||||| |||||||||||| || |||| || || |||||||| | ||||||||||||
Sbjct 6416 GGCGGCACTACGGCCGCACTGCCGGCGTTACCGAGGCCGTGCTTGAAGCCAACCCCGGCC 6357
Query 9241 TCGCCGACTTGGGTCCCATCCTGCCGCACGG 9271
| |||||| || || ||||||||||| ||
Sbjct 6356 TGGCCGACCACGGCCCGATCCTGCCGCAAGG 6326
Score = 127 bits (140), Expect = 5e-25
Identities = 300/445 (67%), Gaps = 10/445 (2%)
Strand=Plus/Minus
Query 15289 AACGCGACGCCGCTGGAGCGTCGCGCCGCGCAGACG--GGCGCACGCATCGAACGCGTGC 15346
||| ||||| ||||||| | | || || || || |||||| || | |||||||
Sbjct 1169 AACTCGACGACGCTGGAACAACAAGCTGCTCAAGCGCTGGCGCAA--ATTCAGCGCGTGC 1112
Query 15347 CGGTGCCGCTGCGCGACCTGTGGAACCCAGCCACCTGTCCGGCCGAGCTGTTGCCCTTCC 15406
| | || |||||| | || || || || | | | || ||| |||||| |||| | ||
Sbjct 1111 CCATTCCACTGCGCCAGCTTTGCAATCCCGACGCTTGCCCGCTGGAGCTGCTGCCATACC 1052
Query 15407 TGGCCTGGTCGTTTTCCGTGGACCGCTGGAACCCGGCCTGGCCGCTCGCCACCAAGCGCG 15466
|||||||| | || || || || |||||| || ||||| ||| | || || |
Sbjct 1051 TGGCCTGGGCCTTCTCGGTTGATCGCTGGGACAGCAAATGGCCTGAAGCCGCGAAACG-G 993
Query 15467 CCGTGACGGCCG--CCTCCTACTTCGTGCAC-CGCAAGAAGGGCACGATCGGCGCGCTTC 15523
|| | | || | ||| ||||| | ||| ||| |||||||| ||||| || || |
Sbjct 992 TCG-GCCATTCGATCATCCCACTTCATCCACTCGCGT-AAGGGCACCATCGGAGCCCTAC 935
Query 15524 GCCGCGCGGTGGAGCCGCTGGGCTTCCTGATTCGCGTCATCGAGTGGTGGCAGACCAACC 15583
| |||| ||| || ||| |||| | |||||| || | ||||||||||| |||| |
Sbjct 934 GACGCGTGGTCGAACCGTTGGGGTATCTGATTGAAGTGCTTGAGTGGTGGCAAACCACGC 875
Query 15584 CGCCCGGGCCGCGCGGGTCGTTCGGGCTCGATGTGGGCGTGCTGCAAACCGGCATCGACG 15643
|| ||| || || | |||| || | ||||| ||||| |||||||||| ||
Sbjct 874 CGAACGGTGTGCCAGGTACATTCGCAATCAAGGTGGGTGTGCTCGAAACCGGCATAACCG 815
Query 15644 AGGCCATGTACGCCGAGCTGGAACGCCTCATTGACGACGCCAAGCCGTGTTCCCGGCCGA 15703
||| |||||| |||||| | ||||| |||||||||| ||| |||| |
Sbjct 814 AGGAAATGTACCAGGAGCTGACCTGGCTCATCGACGACGCCAGGCCAGTCACCCGACACC 755
Query 15704 TGCTCGGCCTGCAAATCAGCCTGGA 15728
|| ||||||| |||||||| ||
Sbjct 754 TGACCGGCCTGGCTATCAGCCTTGA 730
Score = 114 bits (126), Expect = 3e-21
Identities = 164/232 (71%), Gaps = 12/232 (5%)
Strand=Plus/Minus
Query 6085 GCCCGTTCAAAGCCTACGGCGACGTGACAGCACTGAAGACCGAAGAGCAGGA------CG 6138
|||| ||||||||||||||||||||| || | ||||||||||| ||| ||
Sbjct 9458 GCCCATTCAAAGCCTACGGCGACGTGCTGGCGGTCAAGACCGAAGAAGTGGAAATCAACG 9399
Query 6139 GCAAGA------TGCGCCTGCTCGCGCAGATCGATCCCACGGACGACCTGGTCGCCATGA 6192
|| ||| || ||| |||| || |||| || ||| ||| ||| |||||||||
Sbjct 9398 GCCAGAAAAAGTTGGCTCTGTTCGCCCAAGTCGAACCGACGCCCGAACTGATCGCCATGA 9339
Query 6193 CCAAGGCTCGCCAGAAAATCTTTGCCTCTATGGAGTTGAACCCGAGCTTCGCCGACACCG 6252
|||||| | ||||| ||| |||| || || | || |||||||||||||| |
Sbjct 9338 ACAAGGCCAGGCAGAAGGTCTACACCTCCATCGAAATCGACGACAGCTTCGCCGACACAG 9279
Query 6253 GCGAGGCCTACCTGGTCGGCCTCGCCGTGACCGACAACCCGGCAAGCCTGGG 6304
| || |||||| | ||||| || || || |||||| ||| || ||| ||||
Sbjct 9278 GGGAAGCCTACATCGTCGGTCTGGCAGTCACCGACTCCCCTGCCAGCTTGGG 9227
Score = 80.6 bits (88), Expect = 6e-11
Identities = 109/150 (73%), Gaps = 4/150 (3%)
Strand=Plus/Minus
Query 14506 TGGAATCCGAGCCGATCACCAAGCTCTTGCAGGAGAACGCCTACCGCGAGCTGGTGTGGC 14565
||||||| |||||| | | |||||| |||||||||| || ||||||||| || ||||
Sbjct 1953 TGGAATCGGAGCCGCTGAACAAGCTGCTGCAGGAGAATGCATACCGCGAGACTGTTTGGC 1894
Query 14566 GCCAGCGCGTGAACGACGCGGCGCGTGGGGTCA--TGCTGGCCTTCGCCGAAGGGGAAGA 14623
| |||||||| || || || | | | || | | |||| ||| ||| || ||
Sbjct 1893 GTCAGCGCGTCAATGAAGC--CTCCTTGGCTAACTTGCTTGCCACAGCCCGTGGCACCGA 1836
Query 14624 CCTGGAGCAGATTGCGGCGAACTTCAACGT 14653
| |||| ||| |||| ||||||||||| ||
Sbjct 1835 CTTGGAACAGCTTGCCGCGAACTTCAATGT 1806
>seq3063309
Length=1409
Score = 181 bits (200), Expect = 3e-41
Identities = 411/607 (68%), Gaps = 22/607 (4%)
Strand=Plus/Minus
Query 4695 TTCGCTGTACTCCAGGCGCAGCTGGTCGAGGTCGAACAGGTTGCAGCCGCCGCGGAGCGC 4754
|||| ||||||||| |||| || |||||||||||||| | |||||||||| | ||
Sbjct 596 TTCGTCGTACTCCAGCTGCAGTTGCTCGAGGTCGAACAGATCGCAGCCGCCGGCTATGGC 537
Query 4755 ATCCTCCACCGTCACGATTTGGCGCCACTGGCCGTCCGCGCA----GCGCATGCCGTCGC 4810
|| |||| || | | ||| |||||| |||||||| | ||| |||| || |
Sbjct 536 GTCGTCCAGGGTGATGGTTTTGCGCCATTGGCCGTCGGGGCACAATGCGC---CCTGGGT 480
Query 4811 GAAGCGCGGC---GTGGCTCAGGTCGAGCTTGATCTGTTTGTCCTTGGCCTTGCCGCGGT 4867
| | || | |||| ||||| || | || ||| | | ||||| | |
Sbjct 479 GTATGACGCCTCGGTGGGCCAGGTGCCGCCGGC-CTTCTTGCC---GCGCTTGCTGTTGC 424
Query 4868 TGAACAGTGCGCCGGACCAGAACGGATAGGCCTCATGCGACAAGCTGGAC--GGCGTGGA 4925
||| |||| ||||||||||| || || | ||||| | ||| | ||||| ||
Sbjct 423 GGAATTCCTCGCCCGACCAGAACGGGTACGCTTGGTGCGAGA--CTGCGCTGGGCGTCGA 366
Query 4926 GAAGTAGGTCTGACGCCAGTGCTTGTGGATCGCCATGCCGGAGGCGACCTTGCGCAGTTC 4985
|||||||| | ||||| | ||||||| | ||||| | ||| || ||| ||||
Sbjct 365 AAAGTAGGTTTTGCGCCACTTCTTGTGGGTGCCCATGGCACTGGCCACGGTGCTGAGTTT 306
Query 4986 CTGGAAGCGCGGCACCCAGAAGTATTCATCGAAGTACAGGTTGCCGTGATACGACTGCGC 5045
| |||| | | ||| || || ||||||| ||| | || ||| || || ||| ||
Sbjct 305 GTCGAAGTCACGTATCCAAAAATACTCATCGACGTAGACGTGGCCATGGTAGCCCTGGGC 246
Query 5046 GGTGCGGGCGTTCGT-GCCGAGAAAGTAGAGCGTGGCGCCGTTGGGCAGCACCATCGGAT 5104
||||| | || || | | ||||| ||| |||||||||| ||| ||||| |
Sbjct 245 GGTGCTGCTATTGGTCGACAAGAAACGC-AGCTCGGCGCCGTTGCTGAGCGTGATCGGGT 187
Query 5105 CGCCCTTCAGCTCGATCCCGGCCGCGTCCTTGGCGAACTGGATGATGT-ATTGCTTGAAG 5163
||| |||||||||| || | | ||| || ||||||||||||| | ||| |||
Sbjct 186 TGCCGGTCAGCTCGATGTCGAACCACTGCTTTGCAAACTGGATGATGTAACTGC-GGAAA 128
Query 5164 ACGTGCGCCTGCGCCTTGCTGGCCGATAGGAAAATCTGGTTGCGGCCGGTGGTCAGCGCG 5223
| | || ||||| ||||||||| ||||| | ||||||| |||||| || |||
Sbjct 127 ATTTCCGACTGCGAGCGGCTGGCCGACAGGAACACCTGGTTGTCGCCGGTCAGCACGGCG 68
Query 5224 TCGATGAACGCCTCGCGTGCGAAGTACCACGTCGCGCCGATCTGCCGGCTCTTGAGCAGG 5283
|| |||||||| |||| |||||||| ||||| ||| | ||| ||||| || || | |
Sbjct 67 TCCATGAACGCTTCGCCGGCGAAGTAGTACGTCAGGCCCACCTGGCGGCTTTTCAGGATG 8
Query 5284 TTGCGGA 5290
|||||||
Sbjct 7 TTGCGGA 1
>seq3053335
Length=1201
Score = 136 bits (150), Expect = 9e-28
Identities = 215/300 (72%), Gaps = 16/300 (5%)
Strand=Plus/Plus
Query 7157 AAGCTGGACGCTTGGGCGAAGTTCGCCGACTTCCAGACTCGC-ATCCGCGACGCCATCAT 7215
||| | || || ||||||||||| |||||||| | |||| || | || |||| |
Sbjct 206 AAGATCGATGCCTGGGCGAAGTTTCCCGACTTCAAAGATCGCTATTC-CGCCGCCGTGCA 264
Query 7216 CAAGCGCCAGGCGCTGGACCGCATCATGATCGGCTTCAACGGTGTGAGCCGTGCCGCTAC 7275
|||||| |||| |||||| ||| | ||||| ||| |||| | | ||| || ||
Sbjct 265 AAAGCGCATCGCGCAGGACCGAATCGTTATCGGTTTCCACGGC---ACTCATGCGGCCAC 321
Query 7276 GTCGGACCGGGT-GGCCAAC---CCGATGCTGCAGGACGTGAACAAGGGCTGGCTGCAGA 7331
| | ||||| | || || || | |||||||||||||||||||||||||||||||
Sbjct 322 G-CAGACCGACTTGGAGAAATTTCCCAAGCTGCAGGACGTGAACAAGGGCTGGCTGCAGC 380
Query 7332 ACCTGCGTGAGCAGGCGCCGCAGAGGGTGATGAAGGAAGGCAAGGCGGCCGCCGGCAAGA 7391
| |||| || ||||| |||||| |||| |||| || ||| || ||| ||||||
Sbjct 381 AATTGCGCGAACAGGCCCCGCAGCAGGTGCTGAAAGAGGGC---GCCAACGCTGGCAAGG 437
Query 7392 TCACTGTCGGTGGCGCTGGCGCGGACTATGGAAACCTGGACGCCCTGGTGTACGACATCA 7451
|||| || ||||| |||| || || | ||||| || ||||||||| |||||| ||
Sbjct 438 TCACGCTC---GGCGCCGGCGGCGATTACGCCAACCTTGATGCCCTGGTGCACGACACCA 494
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 119365853728204
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |