Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_010342.1
Length=39245
Score E
Sequences producing significant alignments: (Bits) Value
seq3088442 244 3e-60
seq3065921 223 8e-54
seq277625 210 5e-50
seq2997156 208 2e-49
seq3057371 206 6e-49
seq3045822 194 4e-45
seq2968442 158 3e-34
seq171543 134 3e-27
seq2455313 129 1e-25
seq2394016 125 2e-24
seq2379709 109 1e-19
seq675814 102 2e-17
seq3087442 100 7e-17
seq3083253 98.7 2e-16
seq2903723 98.7 2e-16
seq1927181 98.7 2e-16
seq2315826 91.5 4e-14
seq2630769 89.7 1e-13
seq2981909 86.0 2e-12
seq2596692 86.0 2e-12
seq1989529 84.2 5e-12
seq1639638 80.6 6e-11
>seq3088442
Length=12812
Score = 244 bits (270), Expect = 3e-60
Identities = 485/699 (69%), Gaps = 32/699 (5%)
Strand=Plus/Minus
Query 21276 ATGTCTAAACCATTCATTCAGTGGATGGGCGGCAAGCGCCGCCTGGCTAAACATATCCTG 21335
||| | || ||| || ||| |||||||||||||||||||| || | || | | |||
Sbjct 11229 ATGACAAACCCAATCGTTCCATGGATGGGCGGCAAGCGCCGTCTTTCGAAGCGCCTGCTG 11170
Query 21336 CCGAACTTCCCTGACCACCAGTGCTACGTTGAGCCCTTCGCGGGCGGCGCGGCGCTGTTC 21395
|| ||||| |||||| |||||||||| || || || |||||||| ||||||| |
Sbjct 11169 GCGCTGTTCCCAGACCACGAGTGCTACGTCGAAGTGTTTGCCGGCGGCGCTGCGCTGTAC 11110
Query 21396 TTCATGA---AGCAACCCAGCAAAGTGGAGGTGATCAACGACACCAACAGCGACCTGGTC 21452
|||| | |||| ||| ||||| ||||| | || || ||| ||||||||||
Sbjct 11109 TTCAAGCGAGAGCAGCCCGCAAAAGTCGAGGTTTTGAATGATCTCAAG-GCGACCTGGTG 11051
Query 21453 AACTTGTACCGGGTGGTGCAGCACCACCTGGAGGAGTTCGTGCGCCAGTTCAAGTGGGCG 21512
||||||||||| || || ||||||||||| ||||||||||| || ||||||||||||||
Sbjct 11050 AACTTGTACCGTGTAGTCCAGCACCACCTTGAGGAGTTCGTTCGTCAGTTCAAGTGGGCA 10991
Query 21513 CTGGTCTCGCGTGAGATGTTCGCGTGGGAGAAGCTCA-AGCACACCGACACGCTAACGGA 21571
|| ||| || |||| |||| |||| | ||| | | ||| |||| || || |||||
Sbjct 10990 CTCAGCTCCCGACAGATCTTCGAGTGGCAAAAGATGACAGCGG-CCGAGACACTGACGGA 10932
Query 21572 TATCCAGCGGGCCGCGCGGTTCTACTACCTGCAGCAGCAGGGGTTTGGCGGGAAGGTCAA 21631
||||||| || || | |||| | |||| || || || | ||| || | |||| | |
Sbjct 10931 TATCCAGAAAGCGGCCAGATTCTTCAACCTCCAACACCACGCGTTCGGTGCAAAGG-CCA 10873
Query 21632 CTCGA---ACTTTGGCATCTCGACCACGTCTGGCCCTGGGC--TTAACCTGCTGCGGATC 21686
| || || || | | | || | || | |||| |||| | ||||||||||||||
Sbjct 10872 CGGGACAGACATTCGGAAC-CG-CTACTACCGGCC--GGGCCATCAACCTGCTGCGGATT 10817
Query 21687 GAGGAGAACCTCAGCCAGGC---GCACTTGCGGCTCTCGCGCGTGTTCGTTGAGAACATG 21743
||||| ||||| | ||| ||| | |||| ||| | | ||| || ||| ||
Sbjct 10816 GAGGAAAACCTATCGCTGGCTTGGCA---GAGGCTATCGGGAACCTACGTGGATAACCTG 10760
Query 21744 GACTGG--AAAGCGGTCATGAAGCGCTACGACCGGCCGCACACGTTGCACTATCTCGACC 21801
||| ||| | | |||| | ||||| ||||| ||||| || |||||| | ||||
Sbjct 10759 CCGTGGTTGAAGTGCGC-TGAAAAG-TACGATCGGCCCCACACCTTCCACTATATGGACC 10702
Query 21802 CGCCGTATTGGGCGACCGCTGGCTATGATTGCGAGTTCCCGTTCGAGGAGTATGAGGCGA 21861
| ||||| ||| |||| ||||| | ||| ||| || || |||| ||| |
Sbjct 10701 CTCCGTACTGGAAAACCGAAGGCTACGGCACCGACTTCGGCTTTGACCAGTACGAGCGCA 10642
Query 21862 TGGCC--ACGCTTGCGCGGGAGGTGC-AGGGGAAGGTGATCATCTCGATCAACGATCACC 21918
||||| | | |||||| ||| | || |||||||| | ||||||||||| |
Sbjct 10641 TGGCCGAATTCATGCGCG---CTTGCGAAGGCAAGGTGATGGTAAGCATCAACGATCATC 10585
Query 21919 CTGACATACGCCAGGTGTTCGACGGGCTGCGGATCGAGG 21957
| || || || | |||||| || ||| | || || ||||
Sbjct 10584 CCGATATCCGGCGGGTGTTTGAGGGGTTTCGCATGGAGG 10546
>seq3065921
Length=1479
Score = 223 bits (246), Expect = 8e-54
Identities = 419/605 (69%), Gaps = 31/605 (5%)
Strand=Plus/Plus
Query 21350 CCACCAGTGCTACGTTGAGCCCTTCGCGGGCGGCGCGGCGCTGTTCTTCATGAAGCAACC 21409
|||| | ||||||||||| || || |||||||| ||||| | ||||||| | ||
Sbjct 1 CCACGAATGCTACGTTGAAGTATTTGCCGGCGGCGCCGCGCTCTACTTCATGCGTC--CC 58
Query 21410 CAGCAAA-----GTGGAGGTGATCAACGACACCAACAGCGACCTGGTCAACTTGTACCGG 21464
||| || || || | ||||||| ||| |||||||||| | |||| ||
Sbjct 59 CAGGCTGCGCCTGTTGAAGTCCTTAACGACATTAACGGCGACCTGGTGACGCTGTATCGC 118
Query 21465 GTGGTGCAGCACCACCTGGAGGAGTTCGTGCGCCAGTTCAAGTGGGCGCTGGTCTCGCGT 21524
|| |||||| |||||||||| || ||||||||||||||||| |||||||| |||||
Sbjct 119 GTCGTGCAGAACCACCTGGAAGAATTCGTGCGCCAGTTCAAATGGGCGCTCAGTTCGCGC 178
Query 21525 GAGATGTTCGCGTGGGAGAAGCTCAAGCACACCGACACGCTAACGGATATCCAGCGGGCC 21584
| |||||| |||| ||||| | | | | | || || || || || || ||||| |||
Sbjct 179 CAAGTGTTCGAGTGGCAGAAGATGACCCGCCCTGAAACACTCACCGACATACAGCGCGCC 238
Query 21585 GCGCGGTTCTACTACCTGCAGCAGCAGGGGTTTGGCGGGAAGGTCAAC----TCGAACTT 21640
||||| || | |||||||||||| || | |||| || ||||| ||| || ||
Sbjct 239 GCGCGATTTTTCTACCTGCAGCACCATGCCTTTGCTGGCAAGGT-AACGGGGCAGACGTT 297
Query 21641 TGGCATCTCGACCACGTCTGGCCCTGGGCTTAACCTGCTGCGGATCGAGGAGAA-----C 21695
|||| |||||| | ||||| | | | |||||||||||||||||||| || |
Sbjct 298 CGGCACTGCGACCA---CCGGCCCAGCGATCAACCTGCTGCGGATCGAGGAAAATTTATC 354
Query 21696 CTCAGCCAGGCGCACTTGCGGCTCTCGCGCGTGTTCGTTGAGAACATGGACTGGAAAGCG 21755
|||| ||| ||| || || || | |||||| ||| ||| |||| | |
Sbjct 355 TGCAGCTTGGC-----AGCGTCTTTCCGGCACCTACGTTGAAAACCTGGGCTGGCTTGAG 409
Query 21756 -GTCATGAAGCGCTACGACCGGCCGCACACGTTGCACTATCTCGACCCGCCGTATTGGGC 21814
|| | |||| |||||||| || || || || ||||| | |||||||| || |||
Sbjct 410 TGTGCAG-AGCGTTACGACCGCCCCCATACCTTCCACTACATGGACCCGCCTTACTGGCA 468
Query 21815 GACCGCTGGCTATGATTGCGAGTTCCCGTTCGAGGAGTATGAGGCGATGGCC-AC-GCTT 21872
|||||| || || | || || || |||||| | || ||| |||||| || | |
Sbjct 469 GACCGCCGGTTACGGCGTGGATTTTCCCTTCGAGAATTACGAGCGCATGGCCGACTTCAT 528
Query 21873 GCGCGGGAGGTGCAGGGGAAGGTGATCATCTCGATCAACGATCACCCTGACATACGCCAG 21932
||| | | ||| | || ||||| || || |||||||| ||||| ||||||||||
Sbjct 529 GCG-GCGCTGTG-AAGGCAAGGTCATGGTCAGCATCAACGACCACCCGGACATACGCCGA 586
Query 21933 GTGTT 21937
|||||
Sbjct 587 GTGTT 591
>seq277625
Length=52836
Score = 210 bits (232), Expect = 5e-50
Identities = 469/689 (68%), Gaps = 35/689 (5%)
Strand=Plus/Minus
Query 21275 GATGTCTAAACCATTCATTCAGTGGATGGGCGGCAAGCGCCGCCTGGCTAAACATATCCT 21334
|||| | || ||| | ||| ||||||||||| || || || || | || | | ||
Sbjct 7634 GATGGCGAATCCAATTGTTCCATGGATGGGCGGTAAACGGCGACTTTCCAAGCGCCTGCT 7575
Query 21335 GCCGAACTTCCCTGACCACCAGTGCTACGTTGAGCCCTTCGCGGGCGGCGCGGCGCTGTT 21394
| || |||||||| ||| | ||||| || || || || |||||||| ||||| |
Sbjct 7574 GGCGCTTTTCCCTGATCACGAATGCTATGTGGAAGTGTTTGCCGGCGGCGCCGCGCTTTA 7515
Query 21395 CTTCATGA---AGCAACCCAGCAAAGTGGAGGTGATCAACGACACCAACAGCGACCTGGT 21451
||||| | | || || | ||| || || | |||||| ||| ||||||||||
Sbjct 7514 CTTCAAGCGCGACCAGCCTGCCCGAGTAGAAGTCCTAAACGACCTCAATGGCGACCTGGT 7455
Query 21452 CAACTTGTACCGGGTGGTGCAGCACCACCTGGAGGAGTTCGTGCGCCAGTTCAAGTGGGC 21511
||| | ||||| || || |||||||| || ||||||||||| ||||||||||| |||||
Sbjct 7454 GAACCTATACCGTGTCGTTCAGCACCATCTCGAGGAGTTCGTACGCCAGTTCAAATGGGC 7395
Query 21512 GCTGGTCTCGCGTGAGATGTTCGCGTGGGAGAAGCTCAAGCACACCGACACGCTAACGGA 21571
|| |||||| |||| || | |||| | || | | | | || || |||||
Sbjct 7394 ACTCAGCTCGCGGCAGATCTTTGAGTGGCAAAAAATGGCGGTGCCGCAAACCCTGACGGA 7335
Query 21572 TATCCAGCGGGCCGCGCGGTTCTACTACCTGCAGCAGCAGGGGTTTGGCGGGAAGGTCAA 21631
||||||| |||| || ||||||| ||| || ||||| || | || |||| |||| |||
Sbjct 7334 TATCCAGAGGGCTGCACGGTTCTTCTATCTTCAGCACCATGCTTTCGGCGCCAAGG-CAA 7276
Query 21632 CTCG----AACTTTGGCATCTCGACCA-CGTCTGGCCCTGGGCTTAACCTGCTGCGGATC 21686
| | | ||| || | | |||| || | | ||| | ||| || ||||||||
Sbjct 7275 CCGGACAAACCTTCGGTACAGCTACCACCGGCCGACCC----ATCAACTTGTTGCGGATC 7220
Query 21687 GAGGAGAACCTCAGCCAGGCGCACTTG---CGGCTCTCGCGCGTGTTCGTTGAGAA---- 21739
||||||||||| | ||| || || | || || || | || ||| || ||
Sbjct 7219 GAGGAGAACCT--GTCAGAAGC-CTGGCAACGCCTTTCTGGGACGTACGTCGAAAATCTT 7163
Query 21740 -CATGGACTGGAAAGCGGTCATGAAGCGCTACGACCGGCCGCACACGTTGCACTATCTCG 21798
||||| || ||| | | | || || ||||| || ||||||| |||||| | |
Sbjct 7162 CCATGG-CT--CAAGTGTGC--GGAGAAATATGACCGACCCTACACGTTCCACTATATGG 7108
Query 21799 ACCCGCCGTATTGGGCGACCGCTGGCTATGATTGCGAGTTCCCGTTCGAGGAGTATGAGG 21858
|||| ||||||||| |||| ||||||| || ||| || |||||||| ||
Sbjct 7107 ACCCTCCGTATTGGAAGACCCAGGGCTATGGGGAGGACTTCGGCTTTGAGGAGTACGAAC 7048
Query 21859 CGATGGCC-AC-GCTTGCGCGGGAGGTG-CAGGGGAAGGTGATCATCTCGATCAACGATC 21915
|||||| || | ||| ||| ||| ||||| |||||||| ||| ||||||||||
Sbjct 7047 GAATGGCCGACTTCATGC---GGAAGTGCCAGGGCAAGGTGATGATCAGCATCAACGATC 6991
Query 21916 ACCCTGACATACGCCAGGTGTTCGACGGG 21944
| || ||| | |||| |||||||| |||
Sbjct 6990 ATCCAGACGTGCGCCGTGTGTTCGATGGG 6962
>seq2997156
Length=646
Score = 208 bits (230), Expect = 2e-49
Identities = 446/656 (68%), Gaps = 29/656 (4%)
Strand=Plus/Minus
Query 21299 GATGGGCGGCAAGCGCCGCCTGGCTAAACATATCCTGCCGAACTTCCCTGACCACCAGTG 21358
|||||||||||| ||||||||||| | | | | ||| |||||| ||| | ||
Sbjct 646 GATGGGCGGCAAACGCCGCCTGGCCGACCGCCTTATCCCGCTCTTCCCACCTCACGAATG 587
Query 21359 CTACGTTGAGCCCTTCGCGGGCGGCGCGGCGCTGTTCTTCATGAAGCAACCCAGCAAAGT 21418
||| ||||| ||| || |||||||| ||||| | ||||||| | |||||
Sbjct 586 CTATGTTGAAGTCTTTGCCGGCGGCGCTGCGCTCTACTTCATGCGTC--CCCAGGCCGCG 529
Query 21419 GGAGGTGATCAACGACACCAACAGCGACCTGGTCAACTTGTACCGGGTGGTGCAGCACCA 21478
|| ||| | | | |||| ||||| | | ||||| || |||||| ||||
Sbjct 528 CCAGTTGAA-------ATCCTCGGCGATCTGGTGACGCTTTACCGCGTCGTGCAGAACCA 476
Query 21479 CCTGGAGGAGTTCGTGCGCCAGTTCAAGTGGGCGCTGGTCTCGCGTGAGATGTTCGCGTG 21538
||||||||| ||||||||||||||||| |||||||| ||||| || |||||| |||
Sbjct 475 CCTGGAGGAATTCGTGCGCCAGTTCAAATGGGCGCTCAGTTCGCGCCAGGTGTTCGAGTG 416
Query 21539 GGAGAAGCTCAAGCACACCGACACGCTAACGGATATCCAGCGGGCCGCGCGGTTCTACTA 21598
| ||||| | | | ||| || || || || || ||||| || ||||| || |||| ||
Sbjct 415 GCAGAAGATGACCCGCACGGAAACCCTCACCGACATCCAACGCGCCGCCCGTTTCTTTTA 356
Query 21599 CCTGCAGCAGCAGGGGTTTGGCGGGAAGGTCAAC--TCGAACTTTGGCATCTCGACCACG 21656
||||||||| || | || | ||| || || | | | || || | | || | |||
Sbjct 355 CCTGCAGCACCATGCATTCGCCGGCAAAGTGACCGGGCAGACGTTTGGAACT--GCAACG 298
Query 21657 TCTGGCCCTGGGCTTAACCTGCTGCGGATCGAGGAGAACCT-----CAGCCAGGC-GCAC 21710
| ||||| | ||||||| |||||||||||||| ||||| |||| ||| ||
Sbjct 297 ACCGGCCCAGCCATTAACCTACTGCGGATCGAGGAAAACCTGTCTGCAGCGTGGCAGCGT 238
Query 21711 TTGCGGCTCTCGCGCGTGTTCGTTGAGAACATGGACTGGAAAG-CGGTCATGAAGCGCTA 21769
|| ||| || | | | ||||| ||| | | |||| | || | |||| ||
Sbjct 237 TT----ATCTGGCACTTAT--GTTGAAAACCTTGGCTGGCTCGAATGTGCCG-AGCGGTA 185
Query 21770 CGACCGGCCGCACACGTTGCACTATCTCGACCCGCCGTATTGGGCGACCGCTGGCTATGA 21829
|||||| | || ||||| ||||| | || ||||| || ||| ||| || || ||||
Sbjct 184 CGACCGTGCCCATACGTTCCACTACATGGATCCGCCTTACTGGCAGACGGCCGGTTATGG 125
Query 21830 TTGCGAGTTCCCGTTCGAGGAGTATGAGGCGATGGCCACGCTTGCGCGGGAGGTGC-AGG 21888
|| || || || ||| | || ||| |||||| || || || | ||| | |
Sbjct 124 CGTGGACTTTCCCTTTGAGAATTACGAGCGCATGGCCGACTTTATGC-GGCGCTGCAAAG 66
Query 21889 GGAAGGTGATCATCTCGATCAACGATCACCCTGACATACGCCAGGTGTTCGACGGG 21944
|||||||||| || ||||||||||||||||| || || | |||||| || |||
Sbjct 65 GGAAGGTGATGGTCAGCATCAACGATCACCCTGATATCCGGCGGGTGTTTGAGGGG 10
>seq3057371
Length=1278
Score = 206 bits (228), Expect = 6e-49
Identities = 415/608 (68%), Gaps = 27/608 (4%)
Strand=Plus/Plus
Query 21351 CACCAGTGCTACGTTGAGCCCTTCGCGGGCGGCGCGGCGCTGTTCTTCATGAAGCAACCC 21410
||| | ||||||||||| || || |||||||| ||||| | ||||||| | |||
Sbjct 1 CACGAATGCTACGTTGAAGTATTTGCCGGCGGCGCCGCGCTCTACTTCATGCGTC--CCC 58
Query 21411 AGCAA-----AGTGGAGGTGATCAACGACACCAACAGCGACCTGGTCAACTTGTACCGGG 21465
|| ||| || || |||| |||| |||| |||| ||||| | | ||||| |
Sbjct 59 AGGCCGCGCCAGTTGAAGTCCTCAATGACATCAACGGCGATCTGGTGACGCTTTACCGCG 118
Query 21466 TGGTGCAGCACCACCTGGAGGAGTTCGTGCGCCAGTTCAAGTGGGCGCTGGTCTCGCGTG 21525
| |||||| |||||||||| || ||||||||||||||||| |||||||| || ||
Sbjct 119 TCGTGCAGAACCACCTGGAAGAATTCGTGCGCCAGTTCAAATGGGCGCTCAGTTCCCGCC 178
Query 21526 AGATGTTCGCGTGGGAGAAGCTCAAGCACACCGACACGCTAACGGATATCCAGCGGGCCG 21585
|| |||||| |||| ||||| | | | | | || || || || || |||||||| ||||
Sbjct 179 AGGTGTTCGAGTGGCAGAAGATGACCCGCCCTGAAACCCTCACCGACATCCAGCGCGCCG 238
Query 21586 CGCGGTTCTACTACCTGCAGCAGCAGGGGTTTGGCGGGAAGGTCA---ACTCGAACTTTG 21642
| || || | |||||||||||| || | |||| || ||||| | || || |
Sbjct 239 CCCGTTTTTTCTACCTGCAGCACCACGCCTTTGCTGGCAAGGTGACGGGGCAGACGTTCG 298
Query 21643 GCATCTCGACCACGTCTGGCCCTGGGCTTAACCTGCTGCGGATCGAGGAGAACCT----- 21697
||| | | || | ||||| | | |||||||| ||||| ||||||||| |
Sbjct 299 GCA---CTGCAACTACCGGCCCAGCCATCAACCTGCTACGGATTGAGGAGAACTTGTCTG 355
Query 21698 CAGCCAGGCGCACTTGCGGCTCTCGCGCGTGTTCGTTGAGAACATGGACTGGAAAG-CGG 21756
|||| ||| |||| | || || | ||||| ||| ||| |||| | |
Sbjct 356 CAGCGTGGC-----AGCGGTTGTCCGGCACCTATGTTGAAAACCTGGGCTGGCTTGAATG 410
Query 21757 TCATGAAGCGCTACGACCGGCCGCACACGTTGCACTATCTCGACCCGCCGTATTGGGCGA 21816
| ||| ||||||||||| | || || || |||||| | || ||||| || ||| ||
Sbjct 411 TGCCGAA-CGCTACGACCGTGCCCATACCTTCCACTATATGGATCCGCCTTACTGGCAGA 469
Query 21817 CCGCTGGCTATGATTGCGAGTTCCCGTTCGAGGAGTATGAGGCGATGGCCACGCTTGCGC 21876
|||||||||||| || || || || ||| | || ||| ||||| || ||
Sbjct 470 CCGCTGGCTATGGGGTGGACTTTCCCTTTGAGAATTACGAGCGCATGGCTGACTTTATGC 529
Query 21877 GGGAGGTGC-AGGGGAAGGTGATCATCTCGATCAACGATCACCCTGACATACGCCAGGTG 21935
| | ||| | |||||||| || | |||||||||||||| ||||| || | ||||
Sbjct 530 -GTCGCTGCAAAGGGAAGGTCATGGTAAGCATCAACGATCACCCAGACATCCGACGGGTG 588
Query 21936 TTCGACGG 21943
|| |||||
Sbjct 589 TTTGACGG 596
>seq3045822
Length=1083
Score = 194 bits (214), Expect = 4e-45
Identities = 253/344 (74%), Gaps = 6/344 (2%)
Strand=Plus/Plus
Query 15026 AACGTGTTCGTTGCGCCCTCGGTGCATGCGATCGGCTGC-CTGGCGGCGGTGCAGCCGTG 15084
||||| ||| | ||||||| | || |||| |||| ||||| ||| ||| |||
Sbjct 697 AACGTATTCCTGTCGCCCTCCTCGTTGGCTATCG-CTGCGCTGGCCAAGGTCAAGCAGTG 755
Query 15085 GCAAAGCCCCGGCAACCAGGGCGTGTTGATCCAGGGCGTCGCGCGCCACGTGGATTACAA 15144
| ||||||| || || |||| || | | | ||| | ||| ||| || |||||
Sbjct 756 GGAAAGCCCAGGTAATCAGGTGACCTTTGCCGAAGACGTTTCCCGCGTCGTCGAGTACAA 815
Query 15145 CATTCTCGACAAGTCGACTGATGGCGACCTGCTCAACCGCTACGGCATCAGCTACTACGC 15204
||| ||||||| || || || |||||||||||||| || || ||| | |||||||||||
Sbjct 816 CATCCTCGACACCTCAACCGAAGGCGACCTGCTCAATCGTTATGGCGTGAGCTACTACGC 875
Query 15205 GCGCACCAGCCTGGGCGGGTTCTCGCTGATCGGCAACCGCACGGTGACCGGCGAGTTTAT 15264
||||| || ||||| ||||||||| | ||||||||| | | |||||| |||| ||
Sbjct 876 CCGCACGGTGCTCGGCGGTTTCTCGCTGCTGGGCAACCGCTCCATTACCGGCAAGTTCAT 935
Query 15265 CTCGCACGTAGGCCTTGAAGACGCCATCGGTCGCAAGATCGTC--GGCGCGTCGCAGAAG 15322
| | || ||||| |||||||||||| | |||||| | ||| ||| || | ||||||
Sbjct 936 CAGCTATGTCGGCCTGGAAGACGCCATCAGCCGCAAGCTGGTCAAGGC-CGGC-CAGAAG 993
Query 15323 GCCATGGCGCAGAACTTGACCAAGAGCTTCATGGAGCAGGAGGT 15366
|||||||| |||| | |||||| ||||||||| ||||||||
Sbjct 994 GCCATGGCCAGGAACCTCACCAAGTCCTTCATGGACCAGGAGGT 1037
>seq2968442
Length=509
Score = 158 bits (174), Expect = 3e-34
Identities = 181/241 (75%), Gaps = 2/241 (1%)
Strand=Plus/Minus
Query 15026 AACGTGTTCGTTGCGCCCTCGGTGCATGCGATCGGCTGC-CTGGCGGCGGTGCAGCCGTG 15084
||||||||| | |||| || || || |||| |||| ||||| ||| ||| |||
Sbjct 249 AACGTGTTCCTGTCGCCGTCCTCGCTGGCCATCG-CTGCACTGGCCAAGGTCAAGCAGTG 191
Query 15085 GCAAAGCCCCGGCAACCAGGGCGTGTTGATCCAGGGCGTCGCGCGCCACGTGGATTACAA 15144
| ||||||| |||||||||| || | ||| ||| | ||| || || |||||
Sbjct 190 GGAAAGCCCGGGCAACCAGGTGACCTTCGCCGAGGACGTTTCCCGCGTGGTCGAGTACAA 131
Query 15145 CATTCTCGACAAGTCGACTGATGGCGACCTGCTCAACCGCTACGGCATCAGCTACTACGC 15204
||| ||||||| || || || |||||||||||||||||||||||| | |||||||||||
Sbjct 130 CATCCTCGACACCTCCACCGAGGGCGACCTGCTCAACCGCTACGGCGTGAGCTACTACGC 71
Query 15205 GCGCACCAGCCTGGGCGGGTTCTCGCTGATCGGCAACCGCACGGTGACCGGCGAGTTTAT 15264
|||||||| ||| ||||| || ||| || | || |||||| | | |||||| |||| ||
Sbjct 70 GCGCACCATCCTTGGCGGTTTTTCGTTGCTGGGTAACCGCTCCATCACCGGCAAGTTCAT 11
Query 15265 C 15265
|
Sbjct 10 C 10
>seq171543
Length=4166
Score = 134 bits (148), Expect = 3e-27
Identities = 181/252 (72%), Gaps = 0/252 (0%)
Strand=Plus/Plus
Query 15014 GCGGCGCAGGGCAACGTGTTCGTTGCGCCCTCGGTGCATGCGATCGGCTGCCTGGCGGCG 15073
|||||| || ||||||||| | |||| || || ||||||| | ||||| |
Sbjct 3903 GCGGCGAAGAAGAACGTGTTCCTGTCGCCATCTTCGCTGGCGATCGCCGCGCTGGCCAAG 3962
Query 15074 GTGCAGCCGTGGCAAAGCCCCGGCAACCAGGGCGTGTTGATCCAGGGCGTCGCGCGCCAC 15133
|| | | ||| ||||||| || || |||| ||| | ||| ||| | |||
Sbjct 3963 GTCAAACAATGGGAAAGCCCAGGTAATCAGGTGACGTTCGCCGAGGACGTTTCCCGCGTA 4022
Query 15134 GTGGATTACAACATTCTCGACAAGTCGACTGATGGCGACCTGCTCAACCGCTACGGCATC 15193
|| || |||||||| ||||||| || || || ||||||||||||||||| |||||| |
Sbjct 4023 GTCGAGTACAACATCCTCGACACTTCTACCGAAGGCGACCTGCTCAACCGTTACGGCGTG 4082
Query 15194 AGCTACTACGCGCGCACCAGCCTGGGCGGGTTCTCGCTGATCGGCAACCGCACGGTGACC 15253
||||||||||||||||| || ||||| || |||||| | || |||||| | | |||
Sbjct 4083 AGCTACTACGCGCGCACTGTTCTTGGCGGTTTTTCGCTGCTGGGTAACCGCTCCATCACC 4142
Query 15254 GGCGAGTTTATC 15265
||| |||| |||
Sbjct 4143 GGCAAGTTCATC 4154
>seq2455313
Length=160
Score = 129 bits (142), Expect = 1e-25
Identities = 116/146 (79%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 15134 GTGGATTACAACATTCTCGACAAGTCGACTGATGGCGACCTGCTCAACCGCTACGGCATC 15193
|| || |||||||| ||||||| || || || ||||||||||||||||| |||||| |
Sbjct 147 GTCGAGTACAACATCCTCGACACCTCCACCGAAGGCGACCTGCTCAACCGTTACGGCGTG 88
Query 15194 AGCTACTACGCGCGCACCAGCCTGGGCGGGTTCTCGCTGATCGGCAACCGCACGGTGACC 15253
||||||||||||||||| | ||| ||||| || |||||| | || |||||| | | |||
Sbjct 87 AGCTACTACGCGCGCACTATCCTCGGCGGTTTTTCGCTGCTGGGTAACCGCTCCATCACC 28
Query 15254 GGCGAGTTTATCTCGCACGTAGGCCT 15279
||| |||| ||| |||| |||||
Sbjct 27 GGCAAGTTCATCAGCTACGTCGGCCT 2
>seq2394016
Length=150
Score = 125 bits (138), Expect = 2e-24
Identities = 107/132 (81%), Gaps = 0/132 (0%)
Strand=Plus/Minus
Query 15134 GTGGATTACAACATTCTCGACAAGTCGACTGATGGCGACCTGCTCAACCGCTACGGCATC 15193
|| || |||||||| ||||||| || || || |||||||||||||||||||||||| |
Sbjct 144 GTCGAGTACAACATCCTCGACACCTCCACCGAAGGCGACCTGCTCAACCGCTACGGCGTG 85
Query 15194 AGCTACTACGCGCGCACCAGCCTGGGCGGGTTCTCGCTGATCGGCAACCGCACGGTGACC 15253
|| |||||||| ||||||| ||| ||||| || |||||| | || |||||| | | |||
Sbjct 84 AGTTACTACGCACGCACCATCCTTGGCGGTTTTTCGCTGCTGGGTAACCGCTCCATCACC 25
Query 15254 GGCGAGTTTATC 15265
||| |||| |||
Sbjct 24 GGCAAGTTCATC 13
>seq2379709
Length=148
Score = 109 bits (120), Expect = 1e-19
Identities = 113/148 (76%), Gaps = 0/148 (0%)
Strand=Plus/Plus
Query 21458 GTACCGGGTGGTGCAGCACCACCTGGAGGAGTTCGTGCGCCAGTTCAAGTGGGCGCTGGT 21517
|||||| || |||||| |||||||||| || ||||| ||||||||||| ||||||||
Sbjct 1 GTACCGCGTCGTGCAGAACCACCTGGAAGAATTCGTCCGCCAGTTCAAATGGGCGCTCAG 60
Query 21518 CTCGCGTGAGATGTTCGCGTGGGAGAAGCTCAAGCACACCGACACGCTAACGGATATCCA 21577
|| || || |||||| |||| | ||| | | | | | || || || || || |||||
Sbjct 61 TTCCCGCCAGGTGTTCGAGTGGCAAAAGATGACCCGCCCGGAAACCCTCACCGACATCCA 120
Query 21578 GCGGGCCGCGCGGTTCTACTACCTGCAG 21605
||| ||||| || |||| |||||||||
Sbjct 121 GCGCGCCGCCCGATTCTTTTACCTGCAG 148
>seq675814
Length=106
Score = 102 bits (112), Expect = 2e-17
Identities = 74/86 (86%), Gaps = 0/86 (0%)
Strand=Plus/Plus
Query 21429 AACGACACCAACAGCGACCTGGTCAACTTGTACCGGGTGGTGCAGCACCACCTGGAGGAG 21488
||||||| |||| |||||||||||| ||||||| || |||||| |||||||||| ||
Sbjct 15 AACGACATCAACGGCGACCTGGTCACGCTGTACCGCGTCGTGCAGAACCACCTGGAAGAA 74
Query 21489 TTCGTGCGCCAGTTCAAGTGGGCGCT 21514
||||| ||||||||||| ||||||||
Sbjct 75 TTCGTCCGCCAGTTCAAATGGGCGCT 100
>seq3087442
Length=5153
Score = 100 bits (110), Expect = 7e-17
Identities = 137/189 (72%), Gaps = 2/189 (1%)
Strand=Plus/Minus
Query 20464 CTGGGCGAGGTGTTTCGCACGCTGACCCGCCGCCATGGCTTTTCGCCGCGCGTGGCCCCG 20523
||||| | | |||||||| ||||| ||| | || ||||| ||||||||||| ||
Sbjct 1508 CTGGGTGCGCTGTTTCGCCAATTGACCACGCGCTACGGTTTTTCACCGCGCGTGGCGCCT 1449
Query 20524 GAGCTGGAAGGGATCCCGATCGATCACACCGACCAGGCCGACGAGACAGATATGTCGTTT 20583
|| |||||||| | ||| |||| ||||||| || | || | || ||| |||||
Sbjct 1448 GATCTGGAAGGCGAGCATATCCCGCACATCGACCAGACCAATGAAAGTGACATGGCGTTT 1389
Query 20584 ATCACGCGCCTGGCCAGCGAGCAT-GACGCCGTGGCCAAGCCGGTGGGCGAGCGTTACGT 20642
||||||| ||||||| || | || |||||||||||||| || | ||||| || ||
Sbjct 1388 CTCACGCGTCTGGCCA-ATCGCTTCGATGCCGTGGCCAAGCCTGTCGACGAGCTGTATGT 1330
Query 20643 GCTTGCCCG 20651
||| | |||
Sbjct 1329 GCTGGGCCG 1321
>seq3083253
Length=2668
Score = 98.7 bits (108), Expect = 2e-16
Identities = 198/289 (69%), Gaps = 11/289 (4%)
Strand=Plus/Plus
Query 20383 GTGGCCACGGCCGCGCCGTTTCGCTCAGCGGATGAAAGCGCGTTCCGGGAGCGCCGTTCG 20442
||||| ||||| ||||| || || | ||| |||| |||| ||||||| |
Sbjct 1058 GTGGCGACGGCGGCGCCCTT-CGATGAGC--ATGA------GTTCAAACAGCGCCGCACC 1108
Query 20443 GCCAGCTTTGAGAGCACTACGCTGGGCGAGGTGTTTCGCACGCTGACCCGCCGCCATGGC 20502
|||||| || | || || ||||||| ||||||| ||||| ||||| | ||
Sbjct 1109 GCCAGCCATGGGCCGACAACCCTGGGCGCACTGTTTCGTCAATTGACCAGCCGCTACGGG 1168
Query 20503 TTTTCGCCGCGCGTGGCCCCGGAGCTGGAAGGGATCCCGATCGATCACACCGACCAGGCC 20562
|| || ||||||||||| || ||||| || || ||||||| || | ||| ||| ||
Sbjct 1169 TTCTCCCCGCGCGTGGCGCCTGAGCTCGATGGCGAGCCGATCGCGCATATCGATCAGACC 1228
Query 20563 GACGAGACAGATATGTCGTTTATCACGCGCCTGGCCAGCGAGCAT-GACGCCGTGGCCAA 20621
|||| | || ||| | ||| | || | ||||||| || | || || |||| |||
Sbjct 1229 AACGAAAGTGACATGGCATTTCTGACCAGGCTGGCCA-AACGCTTCGATGCAGTGGTCAA 1287
Query 20622 GCCGGTGGGCGAGCGTTACGTGCTTGCCCGGCGTGGGCAAGTGAAGTCG 20670
||| |||| ||||| |||||||| | ||| || || || ||||||
Sbjct 1288 GCCTGTGGACGAGCTCTACGTGCTGGGCCGTAAAGGTCAGGTCAAGTCG 1336
>seq2903723
Length=337
Score = 98.7 bits (108), Expect = 2e-16
Identities = 206/300 (69%), Gaps = 18/300 (6%)
Strand=Plus/Minus
Query 21654 ACGTCTGGCCCTGGGCTTAACCTGCTGCGGATCGAGGAGAACCT-----CAGCCAGGCGC 21708
||| | ||||| | |||||||||||||||||||||| ||||| |||| |||
Sbjct 291 ACGACCGGCCCGGCCATTAACCTGCTGCGGATCGAGGAAAACCTATCTGCAGCGTGGCA- 233
Query 21709 ACTTGCGGCTCTCGCGCGTGTTCGTTGAGAACATGGACTGGAAAGCG-GTCATGAAGCGC 21767
||| || || || | |||||| ||| ||| |||| | || || ||||
Sbjct 232 ----GCGCCTGTCCGGCACCTACGTTGAAAACTTGGGCTGGCTTGAATGTGCCGA-GCGC 178
Query 21768 TACGACCGGCCGCACACGTTGCACTATCTCGACCCGCCGTATTGGGCGACCGCTGGCTAT 21827
|||||||| | || || || ||||| | |||||||| || ||| ||| || || |||
Sbjct 177 TACGACCGTGCCCATACCTTCCACTACATGGACCCGCCTTACTGGCAGACGGCCGGTTAT 118
Query 21828 GATTGCGAGTTCCCGTTCGAGGAGTATGAGGCGATGGCC-ACG-CTTGCGCGGGAGGTGC 21885
| || || || || || | || ||| |||||| || | |||| | | |||
Sbjct 117 GGCGTGGATTTTCCCTTTGAAAATTACGAGCGCATGGCCGACTTCATGCG---GCGCTGC 61
Query 21886 AGGGG-AAGGTGATCATCTCGATCAACGATCACCCTGACATACGCCAGGTGTTCGACGGG 21944
| || |||||||| || ||||||||||||||||||||||| | |||||| || |||
Sbjct 60 AAAGGCAAGGTGATGGTCAGCATCAACGATCACCCTGACATACGGCGGGTGTTTGAGGGG 1
>seq1927181
Length=127
Score = 98.7 bits (108), Expect = 2e-16
Identities = 80/96 (83%), Gaps = 2/96 (2%)
Strand=Plus/Plus
Query 21429 AACGACACCAACAGCGACCTGGTCAACTTGTACCGGGTGGTGCAGCACCACCTGGAGGAG 21488
||||||| |||| |||||||||||| ||||||| || |||||| ||| |||||| ||
Sbjct 15 AACGACATCAACGGCGACCTGGTCACGCTGTACCGCGTCGTGCAGAACCCCCTGGAAGAA 74
Query 21489 TTCGTGCGCCAGTTCAAGTGGGCGCT--GGTCTCGC 21522
||||| ||||||||||| |||||||| | ||||||
Sbjct 75 TTCGTCCGCCAGTTCAAATGGGCGCTCAGTTCTCGC 110
>seq2315826
Length=139
Score = 91.5 bits (100), Expect = 4e-14
Identities = 100/132 (76%), Gaps = 1/132 (1%)
Strand=Plus/Plus
Query 15060 GCTGC-CTGGCGGCGGTGCAGCCGTGGCAAAGCCCCGGCAACCAGGGCGTGTTGATCCAG 15118
||||| ||||| ||| ||| |||| ||||||| |||||||||| ||| | ||
Sbjct 8 GCTGCACTGGCCAAGGTCAAGCAGTGGGAAAGCCCAGGCAACCAGGTGACGTTCGCCGAG 67
Query 15119 GGCGTCGCGCGCCACGTGGATTACAACATTCTCGACAAGTCGACTGATGGCGACCTGCTC 15178
| ||| | ||| || || |||||||| ||||||| || || || ||||||||||||
Sbjct 68 GACGTTTCTCGCGTGGTCGAGTACAACATCCTCGACACCTCCACCGAAGGCGACCTGCTC 127
Query 15179 AACCGCTACGGC 15190
||||||||||||
Sbjct 128 AACCGCTACGGC 139
>seq2630769
Length=184
Score = 89.7 bits (98), Expect = 1e-13
Identities = 90/117 (77%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 15412 CATCCCTGGTGGTCGTGTCTATCTGCATCCTGACCTCAACACGGTCGAGCGCTATAAAAA 15471
||| ||||| || | || || ||||| ||||| | |||| |||||| || || ||
Sbjct 127 CATTCCTGGCGGCAGCGTGTACCTGCACCCTGAATTGAACAGTGTCGAGAAATACAAGAA 68
Query 15472 CGGTAGCTGGTACATCGTCATCGAGTACGGCCGCTATTCCCCCAATGAGCACATGAT 15528
||||| ||||| |||||||||||| ||||||||||| | || || || ||||||||
Sbjct 67 CGGTACCTGGTTCATCGTCATCGACTACGGCCGCTACGCGCCGAACGAACACATGAT 11
>seq2981909
Length=567
Score = 86.0 bits (94), Expect = 2e-12
Identities = 91/120 (76%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 9426 ATCAAGCAAATGCTGGCGTGGTGGGCCGAGGGCAGCAACCTGGATGCCAAGGTTGCTGAC 9485
|||||||| |||||||||||||||||| ||||||||||||||||| | || ||
Sbjct 122 ATCAAGCAGATGCTGGCGTGGTGGGCCACCGGCAGCAACCTGGATGCACGCCTGGCGGAT 181
Query 9486 CTGGGCCTGCAGCGGCAGACGATCACCGAAGGCGACCCGAATGCGTTCCCTCCGGTACCG 9545
|||||||| |||| || | || |||||||||| |||||||| ||||| |||
Sbjct 182 ATGGGCCTGGAGCGCCAAGTGCTCGATCCAGGCGACCCGGCGGCGTTCCCGCCGGTGCCG 241
>seq2596692
Length=180
Score = 86.0 bits (94), Expect = 2e-12
Identities = 76/95 (80%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 15449 AACACGGTCGAGCGCTATAAAAACGGTAGCTGGTACATCGTCATCGAGTACGGCCGCTAT 15508
|||| |||||| || || ||||| | ||||| |||||||||||| ||||||||||||
Sbjct 180 AACAGTGTCGAGAAGTACAAGAACGGCACCTGGTTCATCGTCATCGACTACGGCCGCTAT 121
Query 15509 TCCCCCAATGAGCACATGATCTTCCACATCAATGC 15543
| || ||||| |||||||| | ||| |||||||
Sbjct 120 GCGCCGAATGAACACATGATTTACCAACTCAATGC 86
>seq1989529
Length=127
Score = 84.2 bits (92), Expect = 5e-12
Identities = 97/129 (75%), Gaps = 4/129 (3%)
Strand=Plus/Minus
Query 21479 CCTGGAGGAGTTCGTGCGCCAGTTCAAGTGGGCGCT--GGTCTCGCGTGAGATGTTCGCG 21536
|||||| || ||||| ||||||||||| |||||||| | |||||| | | |||| |
Sbjct 127 CCTGGAAGAATTCGTCCGCCAGTTCAAATGGGCGCTCAGTTCTCGC--CAAGTATTCGAG 70
Query 21537 TGGGAGAAGCTCAAGCACACCGACACGCTAACGGATATCCAGCGGGCCGCGCGGTTCTAC 21596
||| ||||| | | | | | || || || || || |||||||| ||||| || ||||
Sbjct 69 TGGCAGAAGATGACCCGCCCGGAAACCCTCACCGACATCCAGCGCGCCGCCCGATTCTTT 10
Query 21597 TACCTGCAG 21605
|||||||||
Sbjct 9 TACCTGCAG 1
>seq1639638
Length=126
Score = 80.6 bits (88), Expect = 6e-11
Identities = 76/97 (78%), Gaps = 0/97 (0%)
Strand=Plus/Minus
Query 15412 CATCCCTGGTGGTCGTGTCTATCTGCATCCTGACCTCAACACGGTCGAGCGCTATAAAAA 15471
|||||| || || | || || ||||| || || ||||||| |||||| || || ||
Sbjct 97 CATCCCCGGCGGCAGCGTGTACCTGCACCCGGAACTCAACAGTGTCGAGAAGTACAAGAA 38
Query 15472 CGGTAGCTGGTACATCGTCATCGAGTACGGCCGCTAT 15508
||| | ||||| |||||||||||| ||||||||||||
Sbjct 37 CGGCACCTGGTTCATCGTCATCGACTACGGCCGCTAT 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 120860932470474
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |