Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_011165.1
Length=64427
Score E
Sequences producing significant alignments: (Bits) Value
seq3087670 87.8 7e-13
>seq3087670
Length=5654
Score = 87.8 bits (96), Expect = 7e-13
Identities = 114/156 (73%), Gaps = 4/156 (3%)
Strand=Plus/Plus
Query 34279 GGGGACGGCTGGAAGTATCGCGGTCGCGGCCTGATCCAGCTGACCGGGAAATCGAACTAT 34338
|||||||| ||||| ||||| ||||||||||||||| | |||||| | | ||||||
Sbjct 214 GGGGACGGGCCCAAGTACCGCGGGCGCGGCCTGATCCAGGTCACCGGGCGAGCCAACTAT 273
Query 34339 GCCCTGTTCGCCGAAGACTCCGGTATGGACGTTCTGGAGAAGCCGGAGCTGCTGGAAACT 34398
||| || || ||||| | || ||||| | | | ||||| ||||||||||| |
Sbjct 274 GCCGCGTGCGGCGAAGCCCTGGGCCTGGACCTGATCAACAAGCCTGAGCTGCTGGAGATG 333
Query 34399 CCGGCCGGCGCGTCG--ATGTCTTCGGCATGGTTCT 34432
||| | || || || ||||| |||| |||||||
Sbjct 334 CCG--CAGCACGCCGCCATGTCAGCGGCTTGGTTCT 367
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 198487886878398
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |