Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq155098 87.8 2e-12
seq20229 82.4 7e-11
>seq155098
Length=7669
Score = 87.8 bits (96), Expect = 2e-12
Identities = 147/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 138402 CAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTC 138461
||| |||| ||| | | ||||||||||||||| ||||||| || |||||| ||
Sbjct 7225 CAACACTAGATGAAGAGTGGACTCCTTTTGAATGCTGTAGTCAGACAAAGTACGTTCATC 7284
Query 138462 CTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTC 138521
|| ||||| || || | | |||| || || ||||| ||||| || ||||| || ||
Sbjct 7285 TTCCAGTTGCTTGCCAGCAAAGATCAGTATTTGCTGGTCAGGAGGAATTCCTTCCTTATC 7344
Query 138522 GGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGT 138581
||| || |||| | ||| | || || | | || ||||||| || | ||
Sbjct 7345 CTGGATCTTGGTCTTTACATTTTCTATTGTATCCGAGGGTTCGACCTCGAGAGTGATGGT 7404
Query 138582 TTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| || ||||| || || ||||||||||||||
Sbjct 7405 CTTCCCCGTCAGGGTCTTCACAAAAATCTGCAT 7437
>seq20229
Length=11930
Score = 82.4 bits (90), Expect = 7e-11
Identities = 77/98 (79%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 153642 TACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTG 153701
|||| ||| || || | ||| |||||||||||||| ||| ||||| || ||||| |||
Sbjct 4844 TACTCCACTATTTCTGTGCACAGGTTGCTGCATTTGATGGTTCCCAAGTTCTGCTGGTTG 4903
Query 153702 CTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGG 153739
|| || ||||| || | |||||| |||||||||| ||
Sbjct 4904 CTCTTCCGATTACAGGAATCTTTGTAGAGCATGTATGG 4941
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 477103501483920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |