Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_011611.1
Length=36885
Score E
Sequences producing significant alignments: (Bits) Value
seq156999 96.9 8e-16
>seq156999
Length=6365
Score = 96.9 bits (106), Expect = 8e-16
Identities = 173/248 (70%), Gaps = 5/248 (2%)
Strand=Plus/Plus
Query 11530 AACCTCGCGGCATCCGCAACAACAACCCCGGCAACATCGTTTGGTCGGCACGCAACAACT 11589
|||| |||||| | || ||| ||||||||||||||||| | || |||| | |
Sbjct 3934 AACC-CGCGGCGTTCGTAACCGCAACCCCGGCAACATCGACTACAACTCAGCCAACCAGT 3992
Query 11590 GGCAGGGCCAGCTCCCGCACAACCCGAAGATCGAGCCCCGATTCGCCCGCTTCGACACCG 11649
|||| ||||||||| || | | ||| | | ||| || |||||||| || || ||
Sbjct 3993 GGCAAGGCCAGCTCAAGCCCGATCCGTCGCTTGAGAAGCGGTTCGCCCGGTTTGATACGC 4052
Query 11650 CGCATAACGGCATCCGCGCCCTGGCAAAGCTGCTGCTGAACTATC-GCA-AGGTCCACGG 11707
| | ||||| ||||||||||||| ||| ||||||||| ||| | ||| | | || ||
Sbjct 4053 CCGAGAACGGTATCCGCGCCCTGGGCAAGTTGCTGCTGACCTACCAGCATAAG--CATGG 4110
Query 11708 CCTGCGCACCGTCGAATCGTTGATCGCACGCTGGGCGCCATCCAACGAGAACGACACCCG 11767
||| || || | | | ||| |||||||| ||||| ||||||||||||
Sbjct 4111 GCTGAAGACGGTGAAGGCCATTATCAGCCGCTGGGCACCATCGGTAGAGAACGACACCGC 4170
Query 11768 CGCATATG 11775
||| ||||
Sbjct 4171 CGCCTATG 4178
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 113585910136954
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |