Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_012223.2
Length=44899
Score E
Sequences producing significant alignments: (Bits) Value
seq3088451 104 6e-18
>seq3088451
Length=13260
Score = 104 bits (114), Expect = 6e-18
Identities = 213/317 (67%), Gaps = 0/317 (0%)
Strand=Plus/Plus
Query 18270 ATCGACGCCCGCCTGCGTTACCCGCTAACCGCGCTGTTGTTTGTGGAGTTCGACGCCAAA 18329
|||||||| ||||| ||||| ||||||||| |||| || |||||||||||| |
Sbjct 11832 ATCGACGCAAAGCTGCGCTACCCAAACACCGCGCTGCTGTTCGTCGAGTTCGACGCCGAG 11891
Query 18330 GCGTTCCAGAACATCCCGCGCGTGTCCATCAAGTGCAAAGGCCGCAAAGTTCTAATACCG 18389
|||| |||||| ||| |||| || | ||||| || | ||| | | |||
Sbjct 11892 CAGTTCACGAACATTCCGGCCGTGACCGTGAAGTGTAAGGCGCGCCGGTGGCAGGTGCCG 11951
Query 18390 AACAACTACGACCCGATTAATCATACTTATTCCGGGGACTGGGACGGCACGTTTAAACGC 18449
| ||||||||| ||| | | || || ||||| | |||||||||||| | |||
Sbjct 11952 AGCAACTACGATCCGGTGGCCCGCACCTACTCCGGCGCCTGGGACGGCACCATGAAAGAG 12011
Query 18450 GCATGGACGGATAACCCTGCGTGGCACTGGTACGATATTTGTATTACTGAGCGCTTCGGC 18509
|| ||||| ||||||| || ||| | |||| || || | || || || ||
Sbjct 12012 GCCTGGACCAATAACCCGGCCTGGATCACCTACGGCATCTGCACCCAAGACCGTTTTGGT 12071
Query 18510 CTCGGTCGGCGTATCAAACCGCAAATGTTAAACCGGTACGCGCTCTACCAGATCGCGCAG 18569
|| || || || ||||| ||| ||| | || || | ||| |||| ||||| |||
Sbjct 12072 CTGGGCCGCCGCATCAAGCCGTGGATGGTGGACAAGTGGGAGCTTTACCGAATCGCACAG 12131
Query 18570 CGCTGCGATCAGTTGGT 18586
||||| ||||||||
Sbjct 12132 TATTGCGACCAGTTGGT 12148
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 138290159705102
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |