Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_014458.1
Length=59598
Score E
Sequences producing significant alignments: (Bits) Value
seq2955700 89.7 2e-13
seq2815131 86.0 2e-12
>seq2955700
Length=463
Score = 89.7 bits (98), Expect = 2e-13
Identities = 97/129 (75%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 53372 GCGCTGATGCCTGATGCGCATTTCGGTAAGGGCAGCAGTGTCGGCACGGTGATCCCGACC 53431
||| ||||||| |||| ||| | || ||||| | |||||| || ||||| ||
Sbjct 407 GCGGTGATGCCGGATGTGCACCTGGGCAAGGGTTCGACCATCGGCAGCGTAATCCCCACG 348
Query 53432 GAGGGCGCTGTGATCCCGGCGGCCGTCGGCGTCGATATTGGCTGCGGCATGATCGCAGCC 53491
| |||||| | ||||||||||| || ||||| || || |||||||| ||||| || ||
Sbjct 347 GTGGGCGCGATTATCCCGGCGGCGGTGGGCGTGGACATCGGCTGCGGGATGATTGCCGCG 288
Query 53492 CGCACCACG 53500
|||||||||
Sbjct 287 CGCACCACG 279
>seq2815131
Length=243
Score = 86.0 bits (94), Expect = 2e-12
Identities = 76/95 (80%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 53705 ACGCTGGGCGGCGGCAATCACTTCATCGAGCTGTGCCTCGACCACCTCGACCGCGTGTGG 53764
|||||||| |||||| |||||| ||||| | ||||| ||||| | |||||||||
Sbjct 1 ACGCTGGGTACCGGCAACCACTTCGTCGAGGTCTGCCTGGACCAGGAGCAGCGCGTGTGG 60
Query 53765 TTGTTCCTGCACTCCGGTTCGCGTGGCGTCGGTAA 53799
|| | ||||||||||||||||||||||| || ||
Sbjct 61 TTCATGCTGCACTCCGGTTCGCGTGGCGTAGGCAA 95
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 183601834823920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |