Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09] 3,088,511 sequences; 2,785,377,831 total letters Query= NC_015265.1 Length=37236 Score E Sequences producing significant alignments: (Bits) Value seq3088503 515 9e-142 seq3088488 379 5e-101 seq3063309 145 2e-30 seq326935 140 7e-29 seq334975 91.5 3e-14 >seq3088503 Length=21467 Score = 515 bits (570), Expect = 9e-142 Identities = 968/1407 (69%), Gaps = 37/1407 (3%) Strand=Plus/Plus Query 32228 TCAGCGATGAGCAGATCGAGAAGCTCAACGACGCGTTCCTCGAATCGATCTTCGACTATC 32287 ||||||| |||||||||||| | | || ||||| |||| |||||||| | Sbjct 10159 TCAGCGAAGAGCAGATCGAGCTGTTGCGTGAAGCGTTTATCGACGGCTGTTTCGACTACC 10218 Query 32288 AGCGCAACTGGTATCGCGCCGGCTTCAAGGAACGGATCCGCAACGTCCTGAAGAGCCGGC 32347 || ||||||| || || ||| || |||||| ||| | |||| || ||||||| Sbjct 10219 AGAAAGACTGGTACCGGGCTGGC---AATCAACGGACTCGCGTCATCCTCAAAAGCCGGC 10275 Query 32348 AGATCGGCGCGACCTGGTACTTCGCGCGCGAGGCGTTGCTCGACGCGCTGAACACAGGCC 32407 ||||||||||||||| ||||| || ||||||||||| || || |||||| | || || | Sbjct 10276 AGATCGGCGCGACCTATTACTTTGCCCGCGAGGCGTTTCTTGATGCGCTGGAAACCGGGC 10335 Query 32408 GCAATCAAATCTTCCTGTCGGCCAGCAAGGCACAGGCGCACGTGTTCCGCCAGTACATCG 32467 ||||||| ||||||||||| || || || || | |||| ||| ||||||| Sbjct 10336 GCAATCAGATCTTCCTGTCCGCATCGAAAAACCAAGCCTATCTGTTTCGCGGGTACATCC 10395 Query 32468 TGCAGTTCGCGAAAGACGCGGTCGACGTCGAGCTGAAGGGCGACCCGATCGTGCTGCCGA 32527 | || || || | ||| |||||||||| ||| || || ||||| |||| | Sbjct 10396 AGGCATTTGCCCGTGAGGTTATCGGTGTCGAGCTGACGGGGGATCCCATCGTATTGCCCA 10455 Query 32528 ACGGTGCGACGCTGTACTTCCTCGGCACCAACGCGCGCACTGCGCAGAGCTACCACGGCA 32587 |||| || ||||| |||||||| ||||| ||||| || || ||| |||||||||||| Sbjct 10456 ACGGCGCCGAGCTGTTTTTCCTCGGTACCAATGCGCGTACCGCCCAGGGCTACCACGGCA 10515 Query 32588 ACCTGTATTTCGACGAGTACTTCTGGGTGCCGCGCTTCCAGGAGCTGCGCAAGGTCGCCT 32647 | | || |||||||| | ||||||| | || |||| ||| ||||||||| | Sbjct 10516 ATTTCTACTTCGACGAATTCTTCTGGACGTTCAAGTTTGAGGAACTGAACAAGGTCGCTT 10575 Query 32648 CCGGCATGGCGATTCACGACCAGTGGCGGCAGACGTATTTCTCGACGCCGTCGAGCCTCG 32707 | |||||||| || ||| | ||||||| | || || |||||||||||||| ||| | | Sbjct 10576 CGGGCATGGCCATGCACAAGAAGTGGCGCAAAACCTACTTCTCGACGCCGTCCAGCATGG 10635 Query 32708 CGCACGACGCTTATCCGTTCTGGTCGGGCAAGCTGTTCAACCGTGGCCGACCGAAAGATC 32767 | || || || || | |||||| | ||| ||| |||||| || || | | Sbjct 10636 CCCATGAGGCCTACACCTTCTGGACCGGCGAGCGCTTCAACAAGGGTAAGCCAGCGGCGC 10695 Query 32768 AGCACGTATCGATCGACATTTCGCACGCGGCGCT-GGCCGCGGGCCGTTCGTGTCAGGAC 32826 | ||| | ||||| |||| |||| |||||| | |||| |||| || ||||| Sbjct 10696 AACACACCAAGGTCGACGTTTCCCACGGGGCGCTCCAACAGGGGCGGTTC-TGCGAGGAC 10754 Query 32827 GGCCAGTGGCGCCAGATCGTCACGGTCGAGGACGCCGTGCGCGGCGGTTGCAACAGCGGG 32886 | |||||| ||||||||||| || |||||| | || |||||| || | Sbjct 10755 CGGTTGTGGCGGCAGATCGTCACCATCCTGGACGCAGAGCACGGCGGCTGTGA------- 10807 Query 32887 GCGCGGCCGCTCTTCAATCTCGACCGGCTACGACTGGAATACAGCCCCGAGGAATACGCG 32946 || ||| | | || | | || | ||| |||||||| |||| | ||| Sbjct 10808 --------TCTGTTCGACATTGAGGAGTTGCGTCGGGAGTACAGCCCTGAGGCGTTCGCC 10859 Query 32947 AACCTGCTGCTGTGCCAGTTCATCGACGATTCGCTGTCGG--TTTTCCCGCTGACGGTGT 33004 |||||| || |||| |||| | |||||| | | | | | || ||| || || || Sbjct 10860 AACCTGTTGATGTGTGAGTTTGTTGACGAT--GGAGCCAGCATCTTTCCGTTGGCGTTGC 10917 Query 33005 TGCAGCCGTGCATGGTCGATACCTGGGAGGTGTGG---GACGACTTCAAGCCACTGTACC 33061 ||||| ||||||||||| | |||| | ||| || |||| ||||||| | | Sbjct 10918 TGCAGAGCTGCATGGTCGACAGTTGGGTTGAATGGGCAGAGGACTACAAGCCATTCGCCA 10977 Query 33062 TGCGCCCGTTCGGCGACGAGGAGGTCTGGATCGGCTACGACCCGTCGCATACGGGCGACA 33121 |||| |||||||| ||| |||| ||||||||||||||||| || | || || || Sbjct 10978 TGCGGCCGTTCGGTGACCGTCAGGTATGGATCGGCTACGACCCAGCGGAAACCGGTGATT 11037 Query 33122 GCGCC-GGCTGCGTGGTGATTGCGCCGCCGAAGCGTCCGGGCGGGAAGTTCCGCGTGCTC 33180 || || ||||| |||||| ||||||||||| | |||||||| || |||||||| || Sbjct 11038 GCTCCGGGCTG-GTGGTGGTTGCGCCGCCGCTGGTACCGGGCGGCAAATTCCGCGTCCTG 11096 Query 33181 GAGCGGTTCCAGTGGCACGGTTTGGACTTCGAGGCGCAGGCCGCGCAAATC-GAAGCG-C 33238 |||||| ||| | | || ||||||| | ||| ||||| || ||| || || | Sbjct 11097 GAGCGGCACCAATTCCGGGGCATGGACTTTGCGGCCCAGGCGGCATTTATCAAAAACGTC 11156 Query 33239 TGACGCGGCGCTATCGCGTGACCTACATCGGCATTGACACGACCGGGATCGGGCAG-GGC 33297 || || ||||| | |||||||| ||||| ||||| |||||| | ||| || ||| Sbjct 11157 TG-CG-ACCGCTACTGGGTGACCTATATCGGGATTGATGTCACCGGGCT-GGGTAGCGGC 11213 Query 33298 GTGTATCAGCTCGTCACGAAGTTTTTCCCGGCCGCGACGCCGTTCCACTACTCGGTGGAA 33357 ||| ||||| || |||| |||||||| | ||| | ||| ||| ||| ||| Sbjct 11214 GTGGCGCAGCTGGTGCGCCAGTTCTTCCCGGCTGTGACCACCTTCAGCTATTCGCCCGAA 11273 Query 33358 ATCAAGAC-CGCGCTGGTGATGAAGGCGCAGAACGTGATCCGCAAGGGTCGGCTCGAGTT 33416 |||| || ||| |||||| ||||||| | ||||||||| || || ||||| ||||| Sbjct 11274 GTCAAAACACGC-CTGGTGCTGAAGGCCTATGACGTGATCCATAACGGCCGGCTGGAGTT 11332 Query 33417 CGACGCCGGCTGGAACGATCTCGCCGCGTCATTCATGGCGATCAAGAAAACCATCACGCC 33476 ||||||||| |||| ||| | || ||| | ||||||||| || || |||| | Sbjct 11333 CGACGCCGGGTGGACCGACATGGCGCAGTCGATGATGGCGATCCGCAAGACGGTCACCGC 11392 Query 33477 CAGCGGCCTGCAGGTCACGTACAAGGCGAGCCGCTCGGAAGAAGCGAGCCACGGCGATCT 33536 |||| | ||| ||| |||| || | ||| || | | |||| | ||| || Sbjct 11393 AGGCGGTCGCCAGTACACCTACACCGCAGGGCGCAACGACAACACCGGCCATGCCGACCT 11452 Query 33537 CGCCTGGGCGTGCATGCACGCGCTGGCGAACGAGCCGCTCGAAGGGGCGACTGCCACCAA 33596 ||||||||| | ||||| || ||||| ||||| || ||| ||| ||| |||| Sbjct 11453 GGCCTGGGCGCTATTTCACGCATTGCAAAACGAACCGCTTGAGGGGCAGACCGCCTCCAA 11512 Query 33597 TACCGGATTCATGGAGATTTTCTGATG 33623 |||||| ||||||||||| ||||| Sbjct 11513 TACCGGGCGAATGGAGATTTTTTGATG 11539 Score = 235 bits (260), Expect = 1e-57 Identities = 561/836 (67%), Gaps = 39/836 (5%) Strand=Plus/Plus Query 29933 TCGAAGTTCTCGATGCGATCGCGCTTCGGGTTGTCGATGAGCGCGCGACGGCGCGCACCG 29992 ||| |||| |||||||| || ||||| | ||||||| || | ||| ||||| || Sbjct 7816 TCGTAGTTTTCGATGCGGTCACGCTTGGCATTGTCGACGACGGTGCGGCGGCGGCTGCCT 7875 Query 29993 ATTTGCCAGTACAGCGACAGGTTGTCCAGGCGCGTGATCATCAGCGCGCGCGGGGGGAAG 30052 |||||||| | ||||||||| ||||| |||| || || | ||||||| |||||| Sbjct 7876 TCCTGCCAGTAGATCGACAGGTTTTCCAGCTTGGTGACCAGCAACCCGCGCGGCGGGAAG 7935 Query 30053 TACGGCACGCGCACGGCCGGCAGATTGCCGATGCGCTTCTGCGCCGTGATGACGTCCGCG 30112 || |||||||||||||| |||| |||||| | |||||| || |||| || || ||| Sbjct 7936 TAAGGCACGCGCACGGCTGGCAAATTGCCCAAGCGCTTTTGACTGGTGACGATATCGGCG 7995 Query 30113 GCGAGCGCTTCGGTCGGCGGCTGATCCTTGTTCACGACCGGGAAATACTTGTCCTGCAGC 30172 || ||| ||| ||||||| | || ||||| | || ||||||||||||||| |||| Sbjct 7996 GCCAGCATTTCAGTCGGCGCGTTGTCTTTGTTGATGATCGGGAAATACTTGTCGGCCAGC 8055 Query 30173 AGCTCGCGGCCGCAGATCACGACGAGATTCGGATCCTCGACGTACCACGGCTCGAGCAGT 30232 || | ||| ||||||||||| || |||| || || || |||||||||| | | | Sbjct 8056 AGTTGGCGACCGCAGATCACCACCAGATCAGGGTCTTCCTGGTACCACGGCGCAATGAAC 8115 Query 30233 TCGTTGTTCGCGAGCGTG---ACGACGGCGTCAAGGTTCTTGAA----TTGC--TCCCCC 30283 || | | | | || || | |||||| ||||| |||| || | | || Sbjct 8116 TC---TTCCACCATGCTGAATACCAGGGCGTCGAGGTTGGTGAAGTCTTTACCGGCACCG 8172 Query 30284 TTGCCGATCTTCAC---GCCCGAGAACACGCGTTCCTTC------------GCGTTGT-T 30327 || ||| || | ||| || ||| ||||||| ||||| | Sbjct 8173 ATGGTGATTTTGCCGGAGCCTTCGACCAC---TTCCTTCATGACGCGGGCGGCGTTTTCG 8229 Query 30328 GCG-GTAT-TGCTGCAGCCAGCCGATGTTCACGTCCTGCAACAGCGGGTTCGCCGC-GAG 30384 ||| | || | ||||||||| || ||||| |||||||| || || || | || | | Sbjct 8230 GCGCGCATCTTCTGCAGCCAACCAATGTTGACGTCCTGGCGAAGTGGATTGGTGGCTGGG 8289 Query 30385 ATCGGTGTCGGCTGCCGCG-CGCACGCCATTCCAGCCGATCATGATCCGATCGAGCGCCG 30443 | | |||| | |||| | ||||| ||||| ||||||| ||| || || |||||| Sbjct 8290 TTGGACGTCG--CGGCGCGACTGACGCCGTTCCAACCGATCAGGATGCGGTCCAGCGCCT 8347 Query 30444 CGCGTCGAATGATCGCGTCGCGCAGACGAGCCTGGAAGTCCGGGAACTTCGCCCAGGCGT 30503 |||| | ||| ||||| || | ||| ||||||||||| |||||||| ||||| || | Sbjct 8348 GGCGTTTCAGGATGGCGTCACGAATACGGGCCTGGAAGTCGGGGAACTTGGCCCACGCAT 8407 Query 30504 -CGAGGCGCTGATACGTGATGTGCGTGTCGTAGTTCGTCTTCTCGGCGCGATAGCGTTGG 30562 | | |||| ||| || ||| || ||| |||| |||| | | | |||| || Sbjct 8408 CCAACTTGCTGTAACG-GAGGTGGGTATCGAAGTTGGTCTGCGAGCAGAAGTAGCCACGG 8466 Query 30563 CTGTCGAGCGTCGCGATGTCGCGCGTTTCGCGCTCACGCTTGCTCGTGTCGGTGCGGCTC 30622 ||||| || |||||||| ||||||||||| | | || || ||| || Sbjct 8467 TCATCGAGTGTGCTGATGTCGCTGGTTTCGCGCTCTTTGGTATTTGTATCAGTGGTGCCG 8526 Query 30623 GCGGACGGCCCCGAAACGCCGAGGCCGACCTTCTCGCCTTCCATCTCGGTCACGCCGATC 30682 ||| |||||| | ||| | ||| | |||||||| | ||||| |||||| Sbjct 8527 GCGTTCGGCCCGCCGATGCCCATGCCAATTTTCTCGCCCATCTGCTCGGCGACGCCGTAG 8586 Query 30683 ACGTTGATGCTGTTCAGGAAGGCGCTCGATTCCTGCGTCTTGGTTTCGAGCGTCTG 30738 | ||||||| | ||| ||| || || |||||| || | |||| || || || Sbjct 8587 ATGTTGATGGCGCTCAAGAACTGACTGGACTCCTGCATCCGGTTTTCCAGGGTTTG 8642 Score = 138 bits (152), Expect = 3e-28 Identities = 214/304 (70%), Gaps = 4/304 (1%) Strand=Plus/Plus Query 34141 CGGACCTGAACCAGGAGATTTACGGGCTGCCCGAATACCTGTCGGCGCTGAACTCGACCT 34200 |||| || ||||||||||||| || |||| || | | || || | ||| | | Sbjct 12024 CGGATTTGCACCAGGAGATTTATGGCTTGCCGGAGTGGATTAGTGCCTTGCAGTCGGCGT 12083 Query 34201 GGTTGAACGAGAGCGCGACGCTGTTTCGTCGGCGCTATTACAAGAACGGCAGCCATGCGG 34260 | | ||||| || ||| |||| || || || ||| |||| ||||| || || | Sbjct 12084 TGCTCAACGAATCGGCCACGTTGTTCCGCCGCAAGTACTACGAGAATGGCAGTCACGCCG 12143 Query 34261 GCTTCATCCTGTACATGACCGACCCGGCCGACAAGCAGGAG--GACGTCGACAACCTGCG 34318 ||||||| || ||||||||||| | || ||| | | | || ||||| |||| Sbjct 12144 GCTTCATTCTCTACATGACCGATGCCGC--ACAGACTGAAACCGATATCGACGCTTTGCG 12201 Query 34319 CGCGGCGCTGAAGAACGCGAAGGGGCCGGGCAACTTCCGGAACCTGTTCATGTACGCGCC 34378 | ||| || ||| || | |||||||| ||||| || || ||| |||| |||| |||| Sbjct 12202 CAAGGCTCTCAAGGACTCCAAGGGGCCAGGCAATTTTCGCAACTTGTTTGTGTATTCGCC 12261 Query 34379 GAAGGGCAAGAAGGACGGGATCCAGCTGCTGCCGATCGGCGAGGTGGCGGCGAAGGACGA 34438 | ||||||||||||||||| |||||| | ||| || | ||||||||||| ||||| || Sbjct 12262 CACCGGCAAGAAGGACGGGATACAGCTGATCCCGGTCAGTGAGGTGGCGGCCAAGGATGA 12321 Query 34439 GTTC 34442 ||| Sbjct 12322 ATTC 12325 Score = 123 bits (136), Expect = 6e-24 Identities = 275/410 (67%), Gaps = 16/410 (4%) Strand=Plus/Plus Query 31279 GGTTCTT-CGCGCTGAAGGCGAGCATCTCCGTGCCGAGGCTCGCCGGGTTGTCGGTGACG 31337 |||| || |||| ||||||||| | || || || | ||| || ||| ||||||||| Sbjct 9194 GGTTTTTGCGCGGAGAAGGCGAGTAGGTCAGTACCCAAGCTGGCAGGGGAGTCGGTGACT 9253 Query 31338 GCGAGGCCGACGAGGTACGCCTCGCCGGTGCCGGCGAAATCCGGATCGACTTCCATCGAC 31397 || || ||||||| ||| || || || ||| ||||||| |||| ||| || || Sbjct 9254 GCCAGACCGACGATGTAGGCTTCCCCTGTGTCGGCGAAGCTGTCGTCGATTTCGATGGAG 9313 Query 31398 GTGTAGACCTTCTGGCGCTGCTCGGTCGTCATCGCAATCAGGTCTTTCGTCGGCGAGAGC 31457 |||||||||||||| ||| | | |||| || ||||| || |||||| || Sbjct 9314 GTGTAGACCTTCTG--CCTG-GCCTTGTTCATGGCGATCAGTTCGGGCGTCGGTTCGACT 9370 Query 31458 TGCGCGAACAACCGCATCTTT------CCG------TCCTGCTCTTCGGCCTTCAGCGCG 31505 || ||||||| || |||| ||| ||| ||||||| ||| | ||| Sbjct 9371 TGGGCGAACAGAGCCAACTTTTTCTGGCCGTTGATTTCCACTTCTTCGGTCTTGACCGCC 9430 Query 31506 ATCACGTCGCCGTACGCGCGGAATGCGCCATCCGGATAGAGCCCGCGAATGTGTTCCATG 31565 | |||||||||||| || ||||| || |||||| | || | ||| | |||||||| Sbjct 9431 AGCACGTCGCCGTAGGCTTTGAATGGGCTATCCGGCAACAGGCTGCGGAAGTGTTCCAGC 9490 Query 31566 TTGATGCGCGCGCCGTATACCGCCGGGTCGTACGTGCGCGCCATCTGTTCGAGCATCGCG 31625 |||||| ||||| || | ||||| | | | ||| |||||||||| | Sbjct 9491 CAGATGCGGGCGCCATAGGTAGTCGGGTTGAAGTTTTTGGCCGCCTGTTCGAGCCAGCTG 9550 Query 31626 CGATCGATCGTGCGCCCGTCCGTTGTCGCGCCTTCGGTCGCGATCCGGAA 31675 || | ||| ||||| ||||| || ||||| ||| |||| ||||| Sbjct 9551 CGTTTGATGGTGCGTTTGTCCGAGGTAGCGCCCTCGACGGCGACACGGAA 9600 >seq3088488 Length=17142 Score = 379 bits (420), Expect = 5e-101 Identities = 592/841 (70%), Gaps = 14/841 (2%) Strand=Plus/Plus Query 15729 GCGAACTTGACCAGATAGCGGTCGGTGATGCGCTGGCGGAACGTCAGGTCTTCGAGCGGC 15788 ||||| | || ||| || ||||||||||| ||||||||||| || |||||||| || ||| Sbjct 15478 GCGAAGTCGATCAGGTAACGGTCGGTGATTCGCTGGCGGAAGGTGAGGTCTTCAAGTGGC 15537 Query 15789 GGGGCAGGGCAGAAGTCGTAATCGATGAAGCCCTGGCCGGCCTTGAGCGAATCCTTGTCG 15848 || | ||| | |||||||||| | || || |||||||||||| | || ||| | Sbjct 15538 GGCACGGGGGTGTAGTCGTAATCAAGCCAGAGCTTGCCGGCCTTGAGGGTGTCTTTGGTG 15597 Query 15849 TTCG---CGCCCGGATCGAACCAGCATTCGCCGTCGATCAGGTAGCCGGCGGTCTTCCAC 15905 || || |||| | |||||| |||| ||||||||||||| || ||| || Sbjct 15598 TTGATGTCGTCCGGGTT---CCAGCAACTGCCGCCGATCAGGTAGCCCTGGGATTTCAAC 15654 Query 15906 GCGCGGAACTTCGCATTCACGCCATCGACGATGTCGCGCATCAGCGTGCGGCTCATCGGC 15965 |||| | ||| || | ||||| ||||| | |||||| | ||| | | | ||| || Sbjct 15655 TCGCGCATCTTGGCGCTTACGCCTTCGACCAGGTCGCGTACCAGGGAGGCGTGCATAGGG 15714 Query 15966 TGGTCGACGGCCCACATGTGCGCCTCGGCCATCGTGTCGGCGATCACCTGCGCACTGCGC 16025 |||| || |||||||||||||| ||| |||| ||||| |||| | |||||| |||| Sbjct 15715 CGGTCAACTGCCCACATGTGCGCTTCGCCCATGGTGTCCGCGAGGATCTGCGCGGTGCGG 15774 Query 16026 ACATAGTTCTCGAACGCCCACAGCTTGTCCTCGGAACAGGTGCGCGATCCCCATAGACGG 16085 ||||| ||||| || ||| | ||| || |||||||| ||||| | || Sbjct 15775 GTGTAGTTTTCGAAGGCGAACAACGGGTCATCACTGCAGGTGCGGCTACCCCAGAAGCGA 15834 Query 16086 TAACCGTCCGCGTTCACCAGCGTGGTCACTTCGTGGCTGTTCAGGTAGCCCGCGTCGGTG 16145 |||||| ||||| | ||| ||||| || |||| |||||| |||||| ||||||||| Sbjct 15835 AAACCGTTGGCGTTGATCAGGGTGGTGACGTCGTTGCTGTTGAGGTAGTTGGCGTCGGTG 15894 Query 16146 TTCGGGTCCTGCAGGTCCCAGAACACGTCGCGGCTGATGCCCGTGACGCCGTTGACCACG 16205 |||| ||||| ||||||||||||||| |||||| || || ||||| | || | Sbjct 15895 GCTGGGTTTTGCAGATCCCAGAACACGTCGGCGCTGATACCGGTCACGCCACTCACGGCC 15954 Query 16206 ACGTTCGAGATCGTCTTGTGCCAGCCGATCTCTTCGTCGATCTTCGCGCGCATGCCGAGC 16265 ||||| || | || || ||||| || |||||| ||||||||| ||||| | |||||| Sbjct 15955 ACGTTGGACAGGGTTTTATGCCAACCCGTCTCTTGGTCGATCTTGGCGCGAAGGCCGAGG 16014 Query 16266 GCGCGCGCCGTTGCCCACGTGATGTCCTCGGCGTTGGTCGTG---GTGTTCCAGTTCACG 16322 ||||| ||| ||| | | | || ||| ||| | ||| |||| |||||||| | Sbjct 16015 GCGCGGGCCACGGCCGAAGCGCTG---GCGGTCTTGTTGGTGACAGTGTCCCAGTTCAGG 16071 Query 16323 AAATCCGGCCAGATCGTCATCAGCTCACGCTGGCCGAAGTTCGCGCGGTAGGTGGTCGCT 16382 || |||||||| ||| ||||| || || ||||||||| ||||||| | | Sbjct 16072 AAGTCCGGCCAAATCACCATCATTTCGCGGGCACCGAAGTTCTCGCGGTACGCCACTACC 16131 Query 16383 TCCTCCTTCGTCTGTGC-GCCGAACGCGCTGATGTAGCCGAAGCCGCGCAGCTTCTGCGC 16441 || ||||| || | ||| | | ||||| | ||| | ||| ||||||| | | || Sbjct 16132 TCTTCCTTGGT-TTTGCAGTTCCAGGCGCTTACGTATGCAAAGGCGCGCAGGTCTTTGGC 16190 Query 16442 GATCGTCGCAAGCTCGGACGCGACGGGCAGGGTGTCGAGGCCTGGACAACCGAGCACGCG 16501 ||| | | || ||| || || |||| ||||||||||||| || || | || Sbjct 16191 GATGGCGCCGAGGGCGGTGGCTACTGGCAAACTGTCGAGGCCTGGCACGCCAAGGATACG 16250 Query 16502 CGGCTTCACGCCGAGGCGGCTCTTCGCGGCGAGCAGCGCCTTCATACCGGTGTACTGACC 16561 ||| ||| ||| | ||| || || |||||||| || ||||| |||||||| ||||| Sbjct 16251 CGGAGTCATGCCCACGCGTGATTTGGCTGCGAGCAGAGCTTTCATGCCGGTGTATTGACC 16310 Query 16562 G 16562 | Sbjct 16311 G 16311 Score = 87.8 bits (96), Expect = 4e-13 Identities = 248/374 (66%), Gaps = 8/374 (2%) Strand=Plus/Plus Query 14739 GCGCGTTCGCGCCAGTCCATCAGCTCAGACAACGGCATGGCGG--CCATCGCGTCGGGCG 14796 ||||||||||||||||||||||| || || ||| | | |||| | | || | Sbjct 14404 GCGCGTTCGCGCCAGTCCATCAGGTCTTGCA--GGCCCAACTGATCCATATCAGCCGGTG 14461 Query 14797 ACCAGTGGAACACGAGCGCGATATCGGCCATCACGTCGTCGACGGTTCGAGGGAGGCGTC 14856 |||||| || || | || | ||||||||| |||| || ||| ||||||| || || Sbjct 14462 CCCAGTGAAAAACCACAGCCAGATCGGCCATGGCGTCCTCTACGCGACGAGGGATGCATC 14521 Query 14857 CGCCTTCGACGAGTTCGGCACCAAAAAACCGGCTACCTCGGTGCCGAGCTGGACGAGGTC 14916 || ||||| ||| ||| ||| ||||||||||| | | | ||| || | ||||| Sbjct 14522 CGTCTTCGCCGACTTCTGCAACAAAAAACCGGAGATTTTGCTGCTCAGGGCCAGTAGGTC 14581 Query 14917 CGCAGGGTCCAGGCGTAGCACGTCCTGCGTGGTCAGAACGGGATCGCTGATGCGCGGCAG 14976 || ||||||| || || || ||| || || |||||| |||||||| Sbjct 14582 GGCCGGGTCCATGCCGGCGACTTCGACGACGGTGAGGCTTGGCGTGCTGATACGCGGCAG 14641 Query 14977 CACCTTCGACAACGC-GATCACGTCCAGCTGCAGCACGTCGGTGAGCGCGACGCCGCGCA 15035 ||||| || | || | || |||| |||||||| || || |||||||| | Sbjct 14642 AACCTT-GATCAGGCTGGCGACATCCATCTGCAGCAGCTCTACCAGGCTCACGCCGCGTA 14700 Query 15036 GCGCGCCCGCGAGCGGCTTGTTCAGCGTGACAGCGGTGAT-TTCCTGCTCGCCGCGCTTG 15094 | |||| | | |||||| ||| |||| | |||| | || || ||||| | Sbjct 14701 ACTCGCCGGAGTTGGGCTTGCGCAGTGTGATGCTGTTGATGCTGGTGGTC-CCGCGACGG 14759 Query 15095 ATCGGTGTGTCGAG 15108 |||||||| ||||| Sbjct 14760 ATCGGTGTATCGAG 14773 Score = 80.6 bits (88), Expect = 6e-11 Identities = 130/187 (70%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 11750 GCCGGTCAGCTCGGGCAGCAGCACGCCGGACAGCACGATCGTTTCCTCGTCCTCGCCGAC 11809 ||| | |||||| |||| | | ||||| || ||| || || ||| | ||| || Sbjct 10479 GCCAGCCAGCTCCGGCAAGATGATGCCGGGGAGGGTGATTGTGTCGTCGCCACGGCCAAC 10538 Query 11810 GTACTGCCGCGCCGGCTTCCGGCCGACACGGTTGTTGCTCGCGTAGCGCCAGCCGCGCCG 11869 | ||| |||| || | |||||| ||| ||||||| || | ||||||| | | Sbjct 10539 AAATTGCAGCGCTGGAGCCGCGCCGACGCGGCTGTTGCTGGCATGGCGCCAGTTGGTTTG 10598 Query 11870 GCGCTTCAGCTCCTGATAGGGCAGCGTCGAGAGGCTGAACACGAACAGCCCGAGCGCCAT 11929 ||||| ||||||||| || | || ||||| ||||||||||| |||| ||||| | Sbjct 10599 GCGCTGCAGCTCCTGGTAAGCGAGGGTCGAAAGGCTGAACACAAACATGCCGAGGCTGAG 10658 Query 11930 CATCATG 11936 ||||||| Sbjct 10659 CATCATG 10665 >seq3063309 Length=1409 Score = 145 bits (160), Expect = 2e-30 Identities = 286/418 (68%), Gaps = 4/418 (1%) Strand=Plus/Plus Query 32324 TCCGCAACGTCCTGAAGAGCCGGCAGATCGGCGCGACCTGGTACTTCGCGCGCGAGGCGT 32383 |||||||| ||||||| ||||| ||| | ||| ||| | |||||||| |||| |||| Sbjct 1 TCCGCAACATCCTGAAAAGCCGCCAGGTGGGCCTGACGTACTACTTCGCCGGCGAAGCGT 60 Query 32384 TGCTCGACGCGCTGAACACAGGCCGCAATCAAATCTTCCTGTCGGCCAGCAAGGCACAGG 32443 | | ||||| || || ||| ||| || | ||||||||||||||| | ||| Sbjct 61 TCATGGACGCCGTGCTGACCGGCGACAACCAGGTGTTCCTGTCGGCCAGCCGCTCGCAGT 120 Query 32444 CGCACGTGTTCCGCCAGTACATCGTGCAGTTCGCGAAAGACGCGG-TCGACGTCGAGCTG 32502 || | | |||||| |||||| | ||||| || |||| | || ||||| |||||||| Sbjct 121 CGGAAATTTTCCGCAGTTACATCATCCAGTTTGC-AAAGCAGTGGTTCGACATCGAGCTG 179 Query 32503 AAGGGCGACCCGATCGTGCTGCCGAACGGTGCGACGCTGTACTTCCTCGGCACCAACGCG 32562 | ||| |||||||| ||| ||||| || |||| ||| | ||||| Sbjct 180 ACCGGCAACCCGATCACGCTCAGCAACGGCGCCGAGCTGCGTTTCTTGTCGACCAATAGC 239 Query 32563 CGCACTGCGCAGAGCTACCACGGCAACCTGTATTTCGACGAGTACTTCTGGGTGCCGCGC 32622 |||| || ||| ||||||| ||| || | || |||| ||||| || ||| | | | Sbjct 240 AGCACCGCCCAGGGCTACCATGGCCACGTCTACGTCGATGAGTATTTTTGGATACGTGAC 299 Query 32623 TTCCAGGAGCTGCGCAAGGTCGCCTCCGGCATGGCGATTCACGACCAGTGGCGGCAGACG 32682 ||| | | || ||| || ||| | ||||| | ||| | ||||||| | || Sbjct 300 TTCGACAAACTCAGCACCGTGGCCAGTGCCATGGGCACCCACAAGAAGTGGCGCAAAACC 359 Query 32683 TATTTCTCGACGCCGTCGAGC-CTCGCGCACGACGCTTATCCGTTCTGGTCGGGCAAG 32739 || || |||||||| | || || ||||| | || || ||||||||||||||| || Sbjct 360 TACTTTTCGACGCC-CAGCGCAGTCTCGCACCAAGCGTACCCGTTCTGGTCGGGCGAG 416 >seq326935 Length=13877 Score = 140 bits (154), Expect = 7e-29 Identities = 420/638 (66%), Gaps = 28/638 (4%) Strand=Plus/Minus Query 9132 TTTCTGGCCGAGATGGAGAAGGTCGTCCCTTGGTCGCGGCTGCTGTCGGTGATCGGGCCG 9191 || ||| ||||||||| |||||| |||||| | | || || | |||||| || Sbjct 2386 TTCCTGATCGAGATGGATCGGGTCGTGCCTTGGAAGGGTTTGATGGCTCTGATCGAACCC 2327 Query 9192 TATTACCCGAAGGGCGAGCGTGGCCGGCCGCCGATTGGCCTGGAACG-GATGCTGCGGAT 9250 |||||||||||||||| | || || ||| || | | | || | |||||||||| | Sbjct 2326 CATTACCCGAAGGGCGAAGGCGGTCGTCCGGCGTATC-CGTTGATGGCGATGCTGCGGGT 2268 Query 9251 CTACTTGCTGCAGCAGTGGTACGGGTTGTCGGACGAAGGGCTTGAAGATGCGCTCTACGA 9310 | | ||||| | |||| || | || | | | ||||| ||||| ||||| Sbjct 2267 TCATCTCATGCAGAACTGGTTTGGTTACAGTGATCCGGCGATGGAAGAGGCGCTGTACGA 2208 Query 9311 CAGCATCGCGATGC-GCGCC--TTCGCGGGCATCGACCTGGCGCGCGAGAACGTGCCGGA 9367 | | |||| ||||| || | ||| | ||||| ||| || | || || Sbjct 2207 GACGA---CGATCTTGCGCCAGTTTTCCGGCCTGAGCCTGGAGCG----AA--TCCCAGA 2157 Query 9368 CGCCACCACGCTGTTGAAATTCCGGCGCCTGCTGGTCGAGCACGCACTG---ACGCGAAA 9424 || ||||| | | || ||||| |||||||||| | |||| || || ||| Sbjct 2156 CGAAACCACCATTCTCAACTTCCGTCGCCTGCTGGAAAAACACGAGTTGGCCACTGGAAT 2097 Query 9425 GCTGTTCGACGAGATC---GGC-ATCGAGTTGTGCGAGCGCGGGCTGATGATGAAGGAAG 9480 || || || |||| ||| ||| || ||||||| || ||| || ||| Sbjct 2096 TCT---CGGCGTGATCAATGGCTATC----TGGGCGAGCGTGGCCTGTCACTGCGACAAG 2044 Query 9481 GCACGCTGGTGGATGCGACGATCTTCGAGGCTGCGCCGTCCACGAAGAACGCCGGGAAGA 9540 |||| | || ||||| ||| | | | || | | || || |||||| | | | Sbjct 2043 GCACCATCGTCGATGCCACGCTGATTCATGCGCCCACTTCGACCAAGAACAAGGACAGTA 1984 Query 9541 GCCGTGACCCGGAGATGCATCAGACGAAGAAGGGCAACGACTGGTATTTCGGCATGAAGG 9600 || |||||||| ||||| || ||||||||||||||| | | || |||||| || | Sbjct 1983 AACGCGACCCGGAAATGCACCAAACGAAGAAGGGCAACCAGTATTACTTCGGCGCCAAAG 1924 Query 9601 CCCATGTCGGCGTCGACGCCGACTCGGGTCTGGTGCATAGCGTGGTCACCACGGCGGCCA 9660 | || | || ||| ||| |||||||| |||||||| |||||||| ||| ||||||| Sbjct 1923 CGCACATTGGTGTCTACGATGACTCGGGGCTGGTGCACAGCGTGGTGGTCACTGCGGCCA 1864 Query 9661 ACGAGCCGGACGTATCGCAGGCCCACGCCCTGCTGCACGGTCATGAGCAGGAAGCGTTTG 9720 ||| | ||||| || | || | | || ||||| |||||| |||| | | | | | Sbjct 1863 ACGTGGCGGACATAACCCAAGTCGACAAACTGCTACACGGTGCTGAGAACGTGGTCTGCG 1804 Query 9721 GCGATGCGGGCTACACCGGCGTGGACAAGCGCGAGGAG 9758 |||||| ||||| ||||| || || |||||||| ||| Sbjct 1803 CCGATGCAGGCTATACCGGTGTCGAGAAGCGCGAAGAG 1766 >seq334975 Length=539 Score = 91.5 bits (100), Expect = 3e-14 Identities = 211/315 (67%), Gaps = 5/315 (2%) Strand=Plus/Plus Query 33263 ACATCGGCATTGACACGACCGGGATCGGGCAGGGCGTGTATCAGCTCGT-CACGAAGTTT 33321 |||||||||| ||||||||||| || || | ||||||| | | || || | || | || Sbjct 121 ACATCGGCATCGACACGACCGGTATTGGCTACGGCGTGTTTGACCTGGTGCGCG-ACTTC 179 Query 33322 TTCCCGGCCGCGACGCCGTTCCACTACTCGGTGGAAATCAAGACCGCGCTGGTGATGAAG 33381 | ||| ||||| || |||| ||| | |||| ||| | | | ||||| | ||| Sbjct 180 TATCCGCGAGCGACCGCGATCCATTACAGCCTTGAAACCAAAAACACTCTGGTACTCAAG 239 Query 33382 GCGCAGAACGTGATCCGCAAGGGTCGGCTCGAGTTCGACGCCGGCTGGAACGATCTCGCC 33441 || ||| || ||||| | | || |||| | |||||||| |||| ||| ||||| Sbjct 240 GCCCAGGACACGATCCAGGGGAGCCGCATCGAATGGGACGCCGGTTGGACCGACATCGCC 299 Query 33442 GCGTCATTCATGGCGATCAAGAAAACCATCACGCCCAGCGGCCTGCAGGTCACGTACAAG 33501 | | ||| || | ||||| || ||| |||||||| || || ||||||| Sbjct 300 CAGGCGTTCCTGACCATCAAACGCGGCACCACCACCAGCGGC---CAAGTGACGTACAGC 356 Query 33502 GCGAGCCGCTCGGAAGAAGCGAGCCACGGCGATCTCGCCTGGGCGTGCATGCACGCGCTG 33561 || ||| | || | | |||||| |||| | || ||| || ||||||||| ||| Sbjct 357 GCTTCGCGCACTGACGCCACCGGCCACGCCGATATAGCTTGGTCGATCATGCACGCCCTG 416 Query 33562 GCGAACGAGCCGCTC 33576 ||||| || ||| Sbjct 417 TTCAACGAACCCCTC 431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 114667915577236