Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_015265.1
Length=37236
Score E
Sequences producing significant alignments: (Bits) Value
seq3088503 515 9e-142
seq3088488 379 5e-101
seq3063309 145 2e-30
seq326935 140 7e-29
seq334975 91.5 3e-14
>seq3088503
Length=21467
Score = 515 bits (570), Expect = 9e-142
Identities = 968/1407 (69%), Gaps = 37/1407 (3%)
Strand=Plus/Plus
Query 32228 TCAGCGATGAGCAGATCGAGAAGCTCAACGACGCGTTCCTCGAATCGATCTTCGACTATC 32287
||||||| |||||||||||| | | || ||||| |||| |||||||| |
Sbjct 10159 TCAGCGAAGAGCAGATCGAGCTGTTGCGTGAAGCGTTTATCGACGGCTGTTTCGACTACC 10218
Query 32288 AGCGCAACTGGTATCGCGCCGGCTTCAAGGAACGGATCCGCAACGTCCTGAAGAGCCGGC 32347
|| ||||||| || || ||| || |||||| ||| | |||| || |||||||
Sbjct 10219 AGAAAGACTGGTACCGGGCTGGC---AATCAACGGACTCGCGTCATCCTCAAAAGCCGGC 10275
Query 32348 AGATCGGCGCGACCTGGTACTTCGCGCGCGAGGCGTTGCTCGACGCGCTGAACACAGGCC 32407
||||||||||||||| ||||| || ||||||||||| || || |||||| | || || |
Sbjct 10276 AGATCGGCGCGACCTATTACTTTGCCCGCGAGGCGTTTCTTGATGCGCTGGAAACCGGGC 10335
Query 32408 GCAATCAAATCTTCCTGTCGGCCAGCAAGGCACAGGCGCACGTGTTCCGCCAGTACATCG 32467
||||||| ||||||||||| || || || || | |||| ||| |||||||
Sbjct 10336 GCAATCAGATCTTCCTGTCCGCATCGAAAAACCAAGCCTATCTGTTTCGCGGGTACATCC 10395
Query 32468 TGCAGTTCGCGAAAGACGCGGTCGACGTCGAGCTGAAGGGCGACCCGATCGTGCTGCCGA 32527
| || || || | ||| |||||||||| ||| || || ||||| |||| |
Sbjct 10396 AGGCATTTGCCCGTGAGGTTATCGGTGTCGAGCTGACGGGGGATCCCATCGTATTGCCCA 10455
Query 32528 ACGGTGCGACGCTGTACTTCCTCGGCACCAACGCGCGCACTGCGCAGAGCTACCACGGCA 32587
|||| || ||||| |||||||| ||||| ||||| || || ||| ||||||||||||
Sbjct 10456 ACGGCGCCGAGCTGTTTTTCCTCGGTACCAATGCGCGTACCGCCCAGGGCTACCACGGCA 10515
Query 32588 ACCTGTATTTCGACGAGTACTTCTGGGTGCCGCGCTTCCAGGAGCTGCGCAAGGTCGCCT 32647
| | || |||||||| | ||||||| | || |||| ||| ||||||||| |
Sbjct 10516 ATTTCTACTTCGACGAATTCTTCTGGACGTTCAAGTTTGAGGAACTGAACAAGGTCGCTT 10575
Query 32648 CCGGCATGGCGATTCACGACCAGTGGCGGCAGACGTATTTCTCGACGCCGTCGAGCCTCG 32707
| |||||||| || ||| | ||||||| | || || |||||||||||||| ||| | |
Sbjct 10576 CGGGCATGGCCATGCACAAGAAGTGGCGCAAAACCTACTTCTCGACGCCGTCCAGCATGG 10635
Query 32708 CGCACGACGCTTATCCGTTCTGGTCGGGCAAGCTGTTCAACCGTGGCCGACCGAAAGATC 32767
| || || || || | |||||| | ||| ||| |||||| || || | |
Sbjct 10636 CCCATGAGGCCTACACCTTCTGGACCGGCGAGCGCTTCAACAAGGGTAAGCCAGCGGCGC 10695
Query 32768 AGCACGTATCGATCGACATTTCGCACGCGGCGCT-GGCCGCGGGCCGTTCGTGTCAGGAC 32826
| ||| | ||||| |||| |||| |||||| | |||| |||| || |||||
Sbjct 10696 AACACACCAAGGTCGACGTTTCCCACGGGGCGCTCCAACAGGGGCGGTTC-TGCGAGGAC 10754
Query 32827 GGCCAGTGGCGCCAGATCGTCACGGTCGAGGACGCCGTGCGCGGCGGTTGCAACAGCGGG 32886
| |||||| ||||||||||| || |||||| | || |||||| || |
Sbjct 10755 CGGTTGTGGCGGCAGATCGTCACCATCCTGGACGCAGAGCACGGCGGCTGTGA------- 10807
Query 32887 GCGCGGCCGCTCTTCAATCTCGACCGGCTACGACTGGAATACAGCCCCGAGGAATACGCG 32946
|| ||| | | || | | || | ||| |||||||| |||| | |||
Sbjct 10808 --------TCTGTTCGACATTGAGGAGTTGCGTCGGGAGTACAGCCCTGAGGCGTTCGCC 10859
Query 32947 AACCTGCTGCTGTGCCAGTTCATCGACGATTCGCTGTCGG--TTTTCCCGCTGACGGTGT 33004
|||||| || |||| |||| | |||||| | | | | | || ||| || || ||
Sbjct 10860 AACCTGTTGATGTGTGAGTTTGTTGACGAT--GGAGCCAGCATCTTTCCGTTGGCGTTGC 10917
Query 33005 TGCAGCCGTGCATGGTCGATACCTGGGAGGTGTGG---GACGACTTCAAGCCACTGTACC 33061
||||| ||||||||||| | |||| | ||| || |||| ||||||| | |
Sbjct 10918 TGCAGAGCTGCATGGTCGACAGTTGGGTTGAATGGGCAGAGGACTACAAGCCATTCGCCA 10977
Query 33062 TGCGCCCGTTCGGCGACGAGGAGGTCTGGATCGGCTACGACCCGTCGCATACGGGCGACA 33121
|||| |||||||| ||| |||| ||||||||||||||||| || | || || ||
Sbjct 10978 TGCGGCCGTTCGGTGACCGTCAGGTATGGATCGGCTACGACCCAGCGGAAACCGGTGATT 11037
Query 33122 GCGCC-GGCTGCGTGGTGATTGCGCCGCCGAAGCGTCCGGGCGGGAAGTTCCGCGTGCTC 33180
|| || ||||| |||||| ||||||||||| | |||||||| || |||||||| ||
Sbjct 11038 GCTCCGGGCTG-GTGGTGGTTGCGCCGCCGCTGGTACCGGGCGGCAAATTCCGCGTCCTG 11096
Query 33181 GAGCGGTTCCAGTGGCACGGTTTGGACTTCGAGGCGCAGGCCGCGCAAATC-GAAGCG-C 33238
|||||| ||| | | || ||||||| | ||| ||||| || ||| || || |
Sbjct 11097 GAGCGGCACCAATTCCGGGGCATGGACTTTGCGGCCCAGGCGGCATTTATCAAAAACGTC 11156
Query 33239 TGACGCGGCGCTATCGCGTGACCTACATCGGCATTGACACGACCGGGATCGGGCAG-GGC 33297
|| || ||||| | |||||||| ||||| ||||| |||||| | ||| || |||
Sbjct 11157 TG-CG-ACCGCTACTGGGTGACCTATATCGGGATTGATGTCACCGGGCT-GGGTAGCGGC 11213
Query 33298 GTGTATCAGCTCGTCACGAAGTTTTTCCCGGCCGCGACGCCGTTCCACTACTCGGTGGAA 33357
||| ||||| || |||| |||||||| | ||| | ||| ||| ||| |||
Sbjct 11214 GTGGCGCAGCTGGTGCGCCAGTTCTTCCCGGCTGTGACCACCTTCAGCTATTCGCCCGAA 11273
Query 33358 ATCAAGAC-CGCGCTGGTGATGAAGGCGCAGAACGTGATCCGCAAGGGTCGGCTCGAGTT 33416
|||| || ||| |||||| ||||||| | ||||||||| || || ||||| |||||
Sbjct 11274 GTCAAAACACGC-CTGGTGCTGAAGGCCTATGACGTGATCCATAACGGCCGGCTGGAGTT 11332
Query 33417 CGACGCCGGCTGGAACGATCTCGCCGCGTCATTCATGGCGATCAAGAAAACCATCACGCC 33476
||||||||| |||| ||| | || ||| | ||||||||| || || |||| |
Sbjct 11333 CGACGCCGGGTGGACCGACATGGCGCAGTCGATGATGGCGATCCGCAAGACGGTCACCGC 11392
Query 33477 CAGCGGCCTGCAGGTCACGTACAAGGCGAGCCGCTCGGAAGAAGCGAGCCACGGCGATCT 33536
|||| | ||| ||| |||| || | ||| || | | |||| | ||| ||
Sbjct 11393 AGGCGGTCGCCAGTACACCTACACCGCAGGGCGCAACGACAACACCGGCCATGCCGACCT 11452
Query 33537 CGCCTGGGCGTGCATGCACGCGCTGGCGAACGAGCCGCTCGAAGGGGCGACTGCCACCAA 33596
||||||||| | ||||| || ||||| ||||| || ||| ||| ||| ||||
Sbjct 11453 GGCCTGGGCGCTATTTCACGCATTGCAAAACGAACCGCTTGAGGGGCAGACCGCCTCCAA 11512
Query 33597 TACCGGATTCATGGAGATTTTCTGATG 33623
|||||| ||||||||||| |||||
Sbjct 11513 TACCGGGCGAATGGAGATTTTTTGATG 11539
Score = 235 bits (260), Expect = 1e-57
Identities = 561/836 (67%), Gaps = 39/836 (5%)
Strand=Plus/Plus
Query 29933 TCGAAGTTCTCGATGCGATCGCGCTTCGGGTTGTCGATGAGCGCGCGACGGCGCGCACCG 29992
||| |||| |||||||| || ||||| | ||||||| || | ||| ||||| ||
Sbjct 7816 TCGTAGTTTTCGATGCGGTCACGCTTGGCATTGTCGACGACGGTGCGGCGGCGGCTGCCT 7875
Query 29993 ATTTGCCAGTACAGCGACAGGTTGTCCAGGCGCGTGATCATCAGCGCGCGCGGGGGGAAG 30052
|||||||| | ||||||||| ||||| |||| || || | ||||||| ||||||
Sbjct 7876 TCCTGCCAGTAGATCGACAGGTTTTCCAGCTTGGTGACCAGCAACCCGCGCGGCGGGAAG 7935
Query 30053 TACGGCACGCGCACGGCCGGCAGATTGCCGATGCGCTTCTGCGCCGTGATGACGTCCGCG 30112
|| |||||||||||||| |||| |||||| | |||||| || |||| || || |||
Sbjct 7936 TAAGGCACGCGCACGGCTGGCAAATTGCCCAAGCGCTTTTGACTGGTGACGATATCGGCG 7995
Query 30113 GCGAGCGCTTCGGTCGGCGGCTGATCCTTGTTCACGACCGGGAAATACTTGTCCTGCAGC 30172
|| ||| ||| ||||||| | || ||||| | || ||||||||||||||| ||||
Sbjct 7996 GCCAGCATTTCAGTCGGCGCGTTGTCTTTGTTGATGATCGGGAAATACTTGTCGGCCAGC 8055
Query 30173 AGCTCGCGGCCGCAGATCACGACGAGATTCGGATCCTCGACGTACCACGGCTCGAGCAGT 30232
|| | ||| ||||||||||| || |||| || || || |||||||||| | | |
Sbjct 8056 AGTTGGCGACCGCAGATCACCACCAGATCAGGGTCTTCCTGGTACCACGGCGCAATGAAC 8115
Query 30233 TCGTTGTTCGCGAGCGTG---ACGACGGCGTCAAGGTTCTTGAA----TTGC--TCCCCC 30283
|| | | | | || || | |||||| ||||| |||| || | | ||
Sbjct 8116 TC---TTCCACCATGCTGAATACCAGGGCGTCGAGGTTGGTGAAGTCTTTACCGGCACCG 8172
Query 30284 TTGCCGATCTTCAC---GCCCGAGAACACGCGTTCCTTC------------GCGTTGT-T 30327
|| ||| || | ||| || ||| ||||||| ||||| |
Sbjct 8173 ATGGTGATTTTGCCGGAGCCTTCGACCAC---TTCCTTCATGACGCGGGCGGCGTTTTCG 8229
Query 30328 GCG-GTAT-TGCTGCAGCCAGCCGATGTTCACGTCCTGCAACAGCGGGTTCGCCGC-GAG 30384
||| | || | ||||||||| || ||||| |||||||| || || || | || | |
Sbjct 8230 GCGCGCATCTTCTGCAGCCAACCAATGTTGACGTCCTGGCGAAGTGGATTGGTGGCTGGG 8289
Query 30385 ATCGGTGTCGGCTGCCGCG-CGCACGCCATTCCAGCCGATCATGATCCGATCGAGCGCCG 30443
| | |||| | |||| | ||||| ||||| ||||||| ||| || || ||||||
Sbjct 8290 TTGGACGTCG--CGGCGCGACTGACGCCGTTCCAACCGATCAGGATGCGGTCCAGCGCCT 8347
Query 30444 CGCGTCGAATGATCGCGTCGCGCAGACGAGCCTGGAAGTCCGGGAACTTCGCCCAGGCGT 30503
|||| | ||| ||||| || | ||| ||||||||||| |||||||| ||||| || |
Sbjct 8348 GGCGTTTCAGGATGGCGTCACGAATACGGGCCTGGAAGTCGGGGAACTTGGCCCACGCAT 8407
Query 30504 -CGAGGCGCTGATACGTGATGTGCGTGTCGTAGTTCGTCTTCTCGGCGCGATAGCGTTGG 30562
| | |||| ||| || ||| || ||| |||| |||| | | | |||| ||
Sbjct 8408 CCAACTTGCTGTAACG-GAGGTGGGTATCGAAGTTGGTCTGCGAGCAGAAGTAGCCACGG 8466
Query 30563 CTGTCGAGCGTCGCGATGTCGCGCGTTTCGCGCTCACGCTTGCTCGTGTCGGTGCGGCTC 30622
||||| || |||||||| ||||||||||| | | || || ||| ||
Sbjct 8467 TCATCGAGTGTGCTGATGTCGCTGGTTTCGCGCTCTTTGGTATTTGTATCAGTGGTGCCG 8526
Query 30623 GCGGACGGCCCCGAAACGCCGAGGCCGACCTTCTCGCCTTCCATCTCGGTCACGCCGATC 30682
||| |||||| | ||| | ||| | |||||||| | ||||| ||||||
Sbjct 8527 GCGTTCGGCCCGCCGATGCCCATGCCAATTTTCTCGCCCATCTGCTCGGCGACGCCGTAG 8586
Query 30683 ACGTTGATGCTGTTCAGGAAGGCGCTCGATTCCTGCGTCTTGGTTTCGAGCGTCTG 30738
| ||||||| | ||| ||| || || |||||| || | |||| || || ||
Sbjct 8587 ATGTTGATGGCGCTCAAGAACTGACTGGACTCCTGCATCCGGTTTTCCAGGGTTTG 8642
Score = 138 bits (152), Expect = 3e-28
Identities = 214/304 (70%), Gaps = 4/304 (1%)
Strand=Plus/Plus
Query 34141 CGGACCTGAACCAGGAGATTTACGGGCTGCCCGAATACCTGTCGGCGCTGAACTCGACCT 34200
|||| || ||||||||||||| || |||| || | | || || | ||| | |
Sbjct 12024 CGGATTTGCACCAGGAGATTTATGGCTTGCCGGAGTGGATTAGTGCCTTGCAGTCGGCGT 12083
Query 34201 GGTTGAACGAGAGCGCGACGCTGTTTCGTCGGCGCTATTACAAGAACGGCAGCCATGCGG 34260
| | ||||| || ||| |||| || || || ||| |||| ||||| || || |
Sbjct 12084 TGCTCAACGAATCGGCCACGTTGTTCCGCCGCAAGTACTACGAGAATGGCAGTCACGCCG 12143
Query 34261 GCTTCATCCTGTACATGACCGACCCGGCCGACAAGCAGGAG--GACGTCGACAACCTGCG 34318
||||||| || ||||||||||| | || ||| | | | || ||||| ||||
Sbjct 12144 GCTTCATTCTCTACATGACCGATGCCGC--ACAGACTGAAACCGATATCGACGCTTTGCG 12201
Query 34319 CGCGGCGCTGAAGAACGCGAAGGGGCCGGGCAACTTCCGGAACCTGTTCATGTACGCGCC 34378
| ||| || ||| || | |||||||| ||||| || || ||| |||| |||| ||||
Sbjct 12202 CAAGGCTCTCAAGGACTCCAAGGGGCCAGGCAATTTTCGCAACTTGTTTGTGTATTCGCC 12261
Query 34379 GAAGGGCAAGAAGGACGGGATCCAGCTGCTGCCGATCGGCGAGGTGGCGGCGAAGGACGA 34438
| ||||||||||||||||| |||||| | ||| || | ||||||||||| ||||| ||
Sbjct 12262 CACCGGCAAGAAGGACGGGATACAGCTGATCCCGGTCAGTGAGGTGGCGGCCAAGGATGA 12321
Query 34439 GTTC 34442
|||
Sbjct 12322 ATTC 12325
Score = 123 bits (136), Expect = 6e-24
Identities = 275/410 (67%), Gaps = 16/410 (4%)
Strand=Plus/Plus
Query 31279 GGTTCTT-CGCGCTGAAGGCGAGCATCTCCGTGCCGAGGCTCGCCGGGTTGTCGGTGACG 31337
|||| || |||| ||||||||| | || || || | ||| || ||| |||||||||
Sbjct 9194 GGTTTTTGCGCGGAGAAGGCGAGTAGGTCAGTACCCAAGCTGGCAGGGGAGTCGGTGACT 9253
Query 31338 GCGAGGCCGACGAGGTACGCCTCGCCGGTGCCGGCGAAATCCGGATCGACTTCCATCGAC 31397
|| || ||||||| ||| || || || ||| ||||||| |||| ||| || ||
Sbjct 9254 GCCAGACCGACGATGTAGGCTTCCCCTGTGTCGGCGAAGCTGTCGTCGATTTCGATGGAG 9313
Query 31398 GTGTAGACCTTCTGGCGCTGCTCGGTCGTCATCGCAATCAGGTCTTTCGTCGGCGAGAGC 31457
|||||||||||||| ||| | | |||| || ||||| || |||||| ||
Sbjct 9314 GTGTAGACCTTCTG--CCTG-GCCTTGTTCATGGCGATCAGTTCGGGCGTCGGTTCGACT 9370
Query 31458 TGCGCGAACAACCGCATCTTT------CCG------TCCTGCTCTTCGGCCTTCAGCGCG 31505
|| ||||||| || |||| ||| ||| ||||||| ||| | |||
Sbjct 9371 TGGGCGAACAGAGCCAACTTTTTCTGGCCGTTGATTTCCACTTCTTCGGTCTTGACCGCC 9430
Query 31506 ATCACGTCGCCGTACGCGCGGAATGCGCCATCCGGATAGAGCCCGCGAATGTGTTCCATG 31565
| |||||||||||| || ||||| || |||||| | || | ||| | ||||||||
Sbjct 9431 AGCACGTCGCCGTAGGCTTTGAATGGGCTATCCGGCAACAGGCTGCGGAAGTGTTCCAGC 9490
Query 31566 TTGATGCGCGCGCCGTATACCGCCGGGTCGTACGTGCGCGCCATCTGTTCGAGCATCGCG 31625
|||||| ||||| || | ||||| | | | ||| |||||||||| |
Sbjct 9491 CAGATGCGGGCGCCATAGGTAGTCGGGTTGAAGTTTTTGGCCGCCTGTTCGAGCCAGCTG 9550
Query 31626 CGATCGATCGTGCGCCCGTCCGTTGTCGCGCCTTCGGTCGCGATCCGGAA 31675
|| | ||| ||||| ||||| || ||||| ||| |||| |||||
Sbjct 9551 CGTTTGATGGTGCGTTTGTCCGAGGTAGCGCCCTCGACGGCGACACGGAA 9600
>seq3088488
Length=17142
Score = 379 bits (420), Expect = 5e-101
Identities = 592/841 (70%), Gaps = 14/841 (2%)
Strand=Plus/Plus
Query 15729 GCGAACTTGACCAGATAGCGGTCGGTGATGCGCTGGCGGAACGTCAGGTCTTCGAGCGGC 15788
||||| | || ||| || ||||||||||| ||||||||||| || |||||||| || |||
Sbjct 15478 GCGAAGTCGATCAGGTAACGGTCGGTGATTCGCTGGCGGAAGGTGAGGTCTTCAAGTGGC 15537
Query 15789 GGGGCAGGGCAGAAGTCGTAATCGATGAAGCCCTGGCCGGCCTTGAGCGAATCCTTGTCG 15848
|| | ||| | |||||||||| | || || |||||||||||| | || ||| |
Sbjct 15538 GGCACGGGGGTGTAGTCGTAATCAAGCCAGAGCTTGCCGGCCTTGAGGGTGTCTTTGGTG 15597
Query 15849 TTCG---CGCCCGGATCGAACCAGCATTCGCCGTCGATCAGGTAGCCGGCGGTCTTCCAC 15905
|| || |||| | |||||| |||| ||||||||||||| || ||| ||
Sbjct 15598 TTGATGTCGTCCGGGTT---CCAGCAACTGCCGCCGATCAGGTAGCCCTGGGATTTCAAC 15654
Query 15906 GCGCGGAACTTCGCATTCACGCCATCGACGATGTCGCGCATCAGCGTGCGGCTCATCGGC 15965
|||| | ||| || | ||||| ||||| | |||||| | ||| | | | ||| ||
Sbjct 15655 TCGCGCATCTTGGCGCTTACGCCTTCGACCAGGTCGCGTACCAGGGAGGCGTGCATAGGG 15714
Query 15966 TGGTCGACGGCCCACATGTGCGCCTCGGCCATCGTGTCGGCGATCACCTGCGCACTGCGC 16025
|||| || |||||||||||||| ||| |||| ||||| |||| | |||||| ||||
Sbjct 15715 CGGTCAACTGCCCACATGTGCGCTTCGCCCATGGTGTCCGCGAGGATCTGCGCGGTGCGG 15774
Query 16026 ACATAGTTCTCGAACGCCCACAGCTTGTCCTCGGAACAGGTGCGCGATCCCCATAGACGG 16085
||||| ||||| || ||| | ||| || |||||||| ||||| | ||
Sbjct 15775 GTGTAGTTTTCGAAGGCGAACAACGGGTCATCACTGCAGGTGCGGCTACCCCAGAAGCGA 15834
Query 16086 TAACCGTCCGCGTTCACCAGCGTGGTCACTTCGTGGCTGTTCAGGTAGCCCGCGTCGGTG 16145
|||||| ||||| | ||| ||||| || |||| |||||| |||||| |||||||||
Sbjct 15835 AAACCGTTGGCGTTGATCAGGGTGGTGACGTCGTTGCTGTTGAGGTAGTTGGCGTCGGTG 15894
Query 16146 TTCGGGTCCTGCAGGTCCCAGAACACGTCGCGGCTGATGCCCGTGACGCCGTTGACCACG 16205
|||| ||||| ||||||||||||||| |||||| || || ||||| | || |
Sbjct 15895 GCTGGGTTTTGCAGATCCCAGAACACGTCGGCGCTGATACCGGTCACGCCACTCACGGCC 15954
Query 16206 ACGTTCGAGATCGTCTTGTGCCAGCCGATCTCTTCGTCGATCTTCGCGCGCATGCCGAGC 16265
||||| || | || || ||||| || |||||| ||||||||| ||||| | ||||||
Sbjct 15955 ACGTTGGACAGGGTTTTATGCCAACCCGTCTCTTGGTCGATCTTGGCGCGAAGGCCGAGG 16014
Query 16266 GCGCGCGCCGTTGCCCACGTGATGTCCTCGGCGTTGGTCGTG---GTGTTCCAGTTCACG 16322
||||| ||| ||| | | | || ||| ||| | ||| |||| |||||||| |
Sbjct 16015 GCGCGGGCCACGGCCGAAGCGCTG---GCGGTCTTGTTGGTGACAGTGTCCCAGTTCAGG 16071
Query 16323 AAATCCGGCCAGATCGTCATCAGCTCACGCTGGCCGAAGTTCGCGCGGTAGGTGGTCGCT 16382
|| |||||||| ||| ||||| || || ||||||||| ||||||| | |
Sbjct 16072 AAGTCCGGCCAAATCACCATCATTTCGCGGGCACCGAAGTTCTCGCGGTACGCCACTACC 16131
Query 16383 TCCTCCTTCGTCTGTGC-GCCGAACGCGCTGATGTAGCCGAAGCCGCGCAGCTTCTGCGC 16441
|| ||||| || | ||| | | ||||| | ||| | ||| ||||||| | | ||
Sbjct 16132 TCTTCCTTGGT-TTTGCAGTTCCAGGCGCTTACGTATGCAAAGGCGCGCAGGTCTTTGGC 16190
Query 16442 GATCGTCGCAAGCTCGGACGCGACGGGCAGGGTGTCGAGGCCTGGACAACCGAGCACGCG 16501
||| | | || ||| || || |||| ||||||||||||| || || | ||
Sbjct 16191 GATGGCGCCGAGGGCGGTGGCTACTGGCAAACTGTCGAGGCCTGGCACGCCAAGGATACG 16250
Query 16502 CGGCTTCACGCCGAGGCGGCTCTTCGCGGCGAGCAGCGCCTTCATACCGGTGTACTGACC 16561
||| ||| ||| | ||| || || |||||||| || ||||| |||||||| |||||
Sbjct 16251 CGGAGTCATGCCCACGCGTGATTTGGCTGCGAGCAGAGCTTTCATGCCGGTGTATTGACC 16310
Query 16562 G 16562
|
Sbjct 16311 G 16311
Score = 87.8 bits (96), Expect = 4e-13
Identities = 248/374 (66%), Gaps = 8/374 (2%)
Strand=Plus/Plus
Query 14739 GCGCGTTCGCGCCAGTCCATCAGCTCAGACAACGGCATGGCGG--CCATCGCGTCGGGCG 14796
||||||||||||||||||||||| || || ||| | | |||| | | || |
Sbjct 14404 GCGCGTTCGCGCCAGTCCATCAGGTCTTGCA--GGCCCAACTGATCCATATCAGCCGGTG 14461
Query 14797 ACCAGTGGAACACGAGCGCGATATCGGCCATCACGTCGTCGACGGTTCGAGGGAGGCGTC 14856
|||||| || || | || | ||||||||| |||| || ||| ||||||| || ||
Sbjct 14462 CCCAGTGAAAAACCACAGCCAGATCGGCCATGGCGTCCTCTACGCGACGAGGGATGCATC 14521
Query 14857 CGCCTTCGACGAGTTCGGCACCAAAAAACCGGCTACCTCGGTGCCGAGCTGGACGAGGTC 14916
|| ||||| ||| ||| ||| ||||||||||| | | | ||| || | |||||
Sbjct 14522 CGTCTTCGCCGACTTCTGCAACAAAAAACCGGAGATTTTGCTGCTCAGGGCCAGTAGGTC 14581
Query 14917 CGCAGGGTCCAGGCGTAGCACGTCCTGCGTGGTCAGAACGGGATCGCTGATGCGCGGCAG 14976
|| ||||||| || || || ||| || || |||||| ||||||||
Sbjct 14582 GGCCGGGTCCATGCCGGCGACTTCGACGACGGTGAGGCTTGGCGTGCTGATACGCGGCAG 14641
Query 14977 CACCTTCGACAACGC-GATCACGTCCAGCTGCAGCACGTCGGTGAGCGCGACGCCGCGCA 15035
||||| || | || | || |||| |||||||| || || |||||||| |
Sbjct 14642 AACCTT-GATCAGGCTGGCGACATCCATCTGCAGCAGCTCTACCAGGCTCACGCCGCGTA 14700
Query 15036 GCGCGCCCGCGAGCGGCTTGTTCAGCGTGACAGCGGTGAT-TTCCTGCTCGCCGCGCTTG 15094
| |||| | | |||||| ||| |||| | |||| | || || ||||| |
Sbjct 14701 ACTCGCCGGAGTTGGGCTTGCGCAGTGTGATGCTGTTGATGCTGGTGGTC-CCGCGACGG 14759
Query 15095 ATCGGTGTGTCGAG 15108
|||||||| |||||
Sbjct 14760 ATCGGTGTATCGAG 14773
Score = 80.6 bits (88), Expect = 6e-11
Identities = 130/187 (70%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 11750 GCCGGTCAGCTCGGGCAGCAGCACGCCGGACAGCACGATCGTTTCCTCGTCCTCGCCGAC 11809
||| | |||||| |||| | | ||||| || ||| || || ||| | ||| ||
Sbjct 10479 GCCAGCCAGCTCCGGCAAGATGATGCCGGGGAGGGTGATTGTGTCGTCGCCACGGCCAAC 10538
Query 11810 GTACTGCCGCGCCGGCTTCCGGCCGACACGGTTGTTGCTCGCGTAGCGCCAGCCGCGCCG 11869
| ||| |||| || | |||||| ||| ||||||| || | ||||||| | |
Sbjct 10539 AAATTGCAGCGCTGGAGCCGCGCCGACGCGGCTGTTGCTGGCATGGCGCCAGTTGGTTTG 10598
Query 11870 GCGCTTCAGCTCCTGATAGGGCAGCGTCGAGAGGCTGAACACGAACAGCCCGAGCGCCAT 11929
||||| ||||||||| || | || ||||| ||||||||||| |||| ||||| |
Sbjct 10599 GCGCTGCAGCTCCTGGTAAGCGAGGGTCGAAAGGCTGAACACAAACATGCCGAGGCTGAG 10658
Query 11930 CATCATG 11936
|||||||
Sbjct 10659 CATCATG 10665
>seq3063309
Length=1409
Score = 145 bits (160), Expect = 2e-30
Identities = 286/418 (68%), Gaps = 4/418 (1%)
Strand=Plus/Plus
Query 32324 TCCGCAACGTCCTGAAGAGCCGGCAGATCGGCGCGACCTGGTACTTCGCGCGCGAGGCGT 32383
|||||||| ||||||| ||||| ||| | ||| ||| | |||||||| |||| ||||
Sbjct 1 TCCGCAACATCCTGAAAAGCCGCCAGGTGGGCCTGACGTACTACTTCGCCGGCGAAGCGT 60
Query 32384 TGCTCGACGCGCTGAACACAGGCCGCAATCAAATCTTCCTGTCGGCCAGCAAGGCACAGG 32443
| | ||||| || || ||| ||| || | ||||||||||||||| | |||
Sbjct 61 TCATGGACGCCGTGCTGACCGGCGACAACCAGGTGTTCCTGTCGGCCAGCCGCTCGCAGT 120
Query 32444 CGCACGTGTTCCGCCAGTACATCGTGCAGTTCGCGAAAGACGCGG-TCGACGTCGAGCTG 32502
|| | | |||||| |||||| | ||||| || |||| | || ||||| ||||||||
Sbjct 121 CGGAAATTTTCCGCAGTTACATCATCCAGTTTGC-AAAGCAGTGGTTCGACATCGAGCTG 179
Query 32503 AAGGGCGACCCGATCGTGCTGCCGAACGGTGCGACGCTGTACTTCCTCGGCACCAACGCG 32562
| ||| |||||||| ||| ||||| || |||| ||| | |||||
Sbjct 180 ACCGGCAACCCGATCACGCTCAGCAACGGCGCCGAGCTGCGTTTCTTGTCGACCAATAGC 239
Query 32563 CGCACTGCGCAGAGCTACCACGGCAACCTGTATTTCGACGAGTACTTCTGGGTGCCGCGC 32622
|||| || ||| ||||||| ||| || | || |||| ||||| || ||| | | |
Sbjct 240 AGCACCGCCCAGGGCTACCATGGCCACGTCTACGTCGATGAGTATTTTTGGATACGTGAC 299
Query 32623 TTCCAGGAGCTGCGCAAGGTCGCCTCCGGCATGGCGATTCACGACCAGTGGCGGCAGACG 32682
||| | | || ||| || ||| | ||||| | ||| | ||||||| | ||
Sbjct 300 TTCGACAAACTCAGCACCGTGGCCAGTGCCATGGGCACCCACAAGAAGTGGCGCAAAACC 359
Query 32683 TATTTCTCGACGCCGTCGAGC-CTCGCGCACGACGCTTATCCGTTCTGGTCGGGCAAG 32739
|| || |||||||| | || || ||||| | || || ||||||||||||||| ||
Sbjct 360 TACTTTTCGACGCC-CAGCGCAGTCTCGCACCAAGCGTACCCGTTCTGGTCGGGCGAG 416
>seq326935
Length=13877
Score = 140 bits (154), Expect = 7e-29
Identities = 420/638 (66%), Gaps = 28/638 (4%)
Strand=Plus/Minus
Query 9132 TTTCTGGCCGAGATGGAGAAGGTCGTCCCTTGGTCGCGGCTGCTGTCGGTGATCGGGCCG 9191
|| ||| ||||||||| |||||| |||||| | | || || | |||||| ||
Sbjct 2386 TTCCTGATCGAGATGGATCGGGTCGTGCCTTGGAAGGGTTTGATGGCTCTGATCGAACCC 2327
Query 9192 TATTACCCGAAGGGCGAGCGTGGCCGGCCGCCGATTGGCCTGGAACG-GATGCTGCGGAT 9250
|||||||||||||||| | || || ||| || | | | || | |||||||||| |
Sbjct 2326 CATTACCCGAAGGGCGAAGGCGGTCGTCCGGCGTATC-CGTTGATGGCGATGCTGCGGGT 2268
Query 9251 CTACTTGCTGCAGCAGTGGTACGGGTTGTCGGACGAAGGGCTTGAAGATGCGCTCTACGA 9310
| | ||||| | |||| || | || | | | ||||| ||||| |||||
Sbjct 2267 TCATCTCATGCAGAACTGGTTTGGTTACAGTGATCCGGCGATGGAAGAGGCGCTGTACGA 2208
Query 9311 CAGCATCGCGATGC-GCGCC--TTCGCGGGCATCGACCTGGCGCGCGAGAACGTGCCGGA 9367
| | |||| ||||| || | ||| | ||||| ||| || | || ||
Sbjct 2207 GACGA---CGATCTTGCGCCAGTTTTCCGGCCTGAGCCTGGAGCG----AA--TCCCAGA 2157
Query 9368 CGCCACCACGCTGTTGAAATTCCGGCGCCTGCTGGTCGAGCACGCACTG---ACGCGAAA 9424
|| ||||| | | || ||||| |||||||||| | |||| || || |||
Sbjct 2156 CGAAACCACCATTCTCAACTTCCGTCGCCTGCTGGAAAAACACGAGTTGGCCACTGGAAT 2097
Query 9425 GCTGTTCGACGAGATC---GGC-ATCGAGTTGTGCGAGCGCGGGCTGATGATGAAGGAAG 9480
|| || || |||| ||| ||| || ||||||| || ||| || |||
Sbjct 2096 TCT---CGGCGTGATCAATGGCTATC----TGGGCGAGCGTGGCCTGTCACTGCGACAAG 2044
Query 9481 GCACGCTGGTGGATGCGACGATCTTCGAGGCTGCGCCGTCCACGAAGAACGCCGGGAAGA 9540
|||| | || ||||| ||| | | | || | | || || |||||| | | |
Sbjct 2043 GCACCATCGTCGATGCCACGCTGATTCATGCGCCCACTTCGACCAAGAACAAGGACAGTA 1984
Query 9541 GCCGTGACCCGGAGATGCATCAGACGAAGAAGGGCAACGACTGGTATTTCGGCATGAAGG 9600
|| |||||||| ||||| || ||||||||||||||| | | || |||||| || |
Sbjct 1983 AACGCGACCCGGAAATGCACCAAACGAAGAAGGGCAACCAGTATTACTTCGGCGCCAAAG 1924
Query 9601 CCCATGTCGGCGTCGACGCCGACTCGGGTCTGGTGCATAGCGTGGTCACCACGGCGGCCA 9660
| || | || ||| ||| |||||||| |||||||| |||||||| ||| |||||||
Sbjct 1923 CGCACATTGGTGTCTACGATGACTCGGGGCTGGTGCACAGCGTGGTGGTCACTGCGGCCA 1864
Query 9661 ACGAGCCGGACGTATCGCAGGCCCACGCCCTGCTGCACGGTCATGAGCAGGAAGCGTTTG 9720
||| | ||||| || | || | | || ||||| |||||| |||| | | | | |
Sbjct 1863 ACGTGGCGGACATAACCCAAGTCGACAAACTGCTACACGGTGCTGAGAACGTGGTCTGCG 1804
Query 9721 GCGATGCGGGCTACACCGGCGTGGACAAGCGCGAGGAG 9758
|||||| ||||| ||||| || || |||||||| |||
Sbjct 1803 CCGATGCAGGCTATACCGGTGTCGAGAAGCGCGAAGAG 1766
>seq334975
Length=539
Score = 91.5 bits (100), Expect = 3e-14
Identities = 211/315 (67%), Gaps = 5/315 (2%)
Strand=Plus/Plus
Query 33263 ACATCGGCATTGACACGACCGGGATCGGGCAGGGCGTGTATCAGCTCGT-CACGAAGTTT 33321
|||||||||| ||||||||||| || || | ||||||| | | || || | || | ||
Sbjct 121 ACATCGGCATCGACACGACCGGTATTGGCTACGGCGTGTTTGACCTGGTGCGCG-ACTTC 179
Query 33322 TTCCCGGCCGCGACGCCGTTCCACTACTCGGTGGAAATCAAGACCGCGCTGGTGATGAAG 33381
| ||| ||||| || |||| ||| | |||| ||| | | | ||||| | |||
Sbjct 180 TATCCGCGAGCGACCGCGATCCATTACAGCCTTGAAACCAAAAACACTCTGGTACTCAAG 239
Query 33382 GCGCAGAACGTGATCCGCAAGGGTCGGCTCGAGTTCGACGCCGGCTGGAACGATCTCGCC 33441
|| ||| || ||||| | | || |||| | |||||||| |||| ||| |||||
Sbjct 240 GCCCAGGACACGATCCAGGGGAGCCGCATCGAATGGGACGCCGGTTGGACCGACATCGCC 299
Query 33442 GCGTCATTCATGGCGATCAAGAAAACCATCACGCCCAGCGGCCTGCAGGTCACGTACAAG 33501
| | ||| || | ||||| || ||| |||||||| || || |||||||
Sbjct 300 CAGGCGTTCCTGACCATCAAACGCGGCACCACCACCAGCGGC---CAAGTGACGTACAGC 356
Query 33502 GCGAGCCGCTCGGAAGAAGCGAGCCACGGCGATCTCGCCTGGGCGTGCATGCACGCGCTG 33561
|| ||| | || | | |||||| |||| | || ||| || ||||||||| |||
Sbjct 357 GCTTCGCGCACTGACGCCACCGGCCACGCCGATATAGCTTGGTCGATCATGCACGCCCTG 416
Query 33562 GCGAACGAGCCGCTC 33576
||||| || |||
Sbjct 417 TTCAACGAACCCCTC 431
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 114667915577236
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |