Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09] 3,088,511 sequences; 2,785,377,831 total letters Query= NC_015266.1 Length=40555 Score E Sequences producing significant alignments: (Bits) Value seq3088503 517 3e-142 seq3088488 324 3e-84 >seq3088503 Length=21467 Score = 517 bits (572), Expect = 3e-142 Identities = 1047/1535 (68%), Gaps = 26/1535 (2%) Strand=Plus/Plus Query 28580 TCGAGCGCATCGAGGCGGCGGCCGAAACGCGCCTGATGGTCCTGATTGCGAAGGACAAGA 28639 |||||||||||| | |||| ||| |||| || || ||||| ||||| | | Sbjct 9940 TCGAGCGCATCGGCGGGGCGCTGGAAGCGCGGTTGGTGCAGCTGATCCTCAAGGAAAGCA 9999 Query 28640 AGGACGGCGCGGACTACAAGGAAATCGACCTGCTCGGCCGACAGATCGAGCGGCTCGCGC 28699 || ||||| ||||| ||||||||| || ||||| ||| || | || || | || Sbjct 10000 AGAGCGGCGGGGACTTCAAGGAAATTGATCTGCTGCACCGCCAATTGGAACGCCAGGCCA 10059 Query 28700 GCGTGCAGAAATA-CGGGGAGACGGGGAAGGAAGGCGACCTGAACCCGAACATTGCCGCG 28758 | | ||| | | ||| | ||| | ||| ||| || ||||| ||| | || Sbjct 10060 GAATTCAGCGCTTTCAGGGCGGCGGT-ACCGAAACCGAGCTCAACCCTAACCTGGCTAAA 10118 Query 28759 CGCAATGCCGGGCCGAAGCGCAAGCCGCCGAAAAACGAAATCAGCGAGGAACAGGAAGAG 28818 ||||| | || |||||| ||| | || |||||||| |||||||| || ||| ||| Sbjct 10119 CGCAACGAGGGTCCGAAGAAAAAGACCCCAAAAAACGATATCAGCGAAGAGCAGATCGAG 10178 Query 28819 CGGAT-CGTGAAGGCGTTCCGCGAATCACTGTT-CGACTACCAGAAGGTCTGGTATCGAA 28876 | | | ||||||| |||| ||| ||||| |||||||||||| | |||||| || Sbjct 10179 CTGTTGCGTGAAG-CGTTTATCGACGG-CTGTTTCGACTACCAGAAAGACTGGTACCGGG 10236 Query 28877 ACGGCGATCAGCAGACGCGCAATATCCTGAAGTCACGGCAGATCGGCGCCACCTGGTATT 28936 ||| |||| | ||| ||| ||||| || |||||||||||||| |||| || | Sbjct 10237 CTGGCAATCAACGGACTCGCGTCATCCTCAAAAGCCGGCAGATCGGCGCGACCTATTACT 10296 Query 28937 TCGCACGCGAGGCATTCGTCGACGCGCTCGATACCGGCCGCAACCAGATTTTTCTATCGG 28996 | || |||||||| || | || ||||| || ||||| ||||| ||||| || || || | Sbjct 10297 TTGCCCGCGAGGCGTTTCTTGATGCGCTGGAAACCGGGCGCAATCAGATCTTCCTGTCCG 10356 Query 28997 CCAGCAAAGCACAGGCGCACGTCTTCAAACAGTACATCGTGCAGTTCGCTCGTGACGTGG 29056 | ||| || || | | || ||||||| | || || ||||| || Sbjct 10357 CATCGAAAAACCAAGCCTATCTGTTTCGCGGGTACATCCAGGCATTTGCCCGTGAGGTTA 10416 Query 29057 CCGACGTTGAGCTGACGGGCGATCCGATCATTCTGCCGAACGGTGCGACGCTGTACTTCC 29116 || || ||||||||||| ||||| ||| | |||| ||||| || ||||| |||| Sbjct 10417 TCGGTGTCGAGCTGACGGGGGATCCCATCGTATTGCCCAACGGCGCCGAGCTGTTTTTCC 10476 Query 29117 TAGGGACGAACTCGCGCACCGCGCAGTCGTATCACGGCAATCTGTACTTCGACGAATATT 29176 | || || || |||| ||||| ||| || ||||||||| | ||||||||||||| | Sbjct 10477 TCGGTACCAATGCGCGTACCGCCCAGGGCTACCACGGCAATTTCTACTTCGACGAATTCT 10536 Query 29177 TCTGGGTGCCGAAGTTCCGCGAGCTGAATACCGTTGCGTCGGGCATGGCGATGCACAAAC 29236 ||||| | ||||| || ||||| | || || ||||||||||| |||||||| Sbjct 10537 TCTGGACGTTCAAGTTTGAGGAACTGAACAAGGTCGCTTCGGGCATGGCCATGCACAAGA 10596 Query 29237 GCTGGCGGCTGACCTACTTCAGCACGCCGTCGAGTACGACCCATGAAGCCTACGCGTTCT 29296 ||||| ||||||||| |||||||| || | | ||||||| |||||| | |||| Sbjct 10597 AGTGGCGCAAAACCTACTTCTCGACGCCGTCCAGCATGGCCCATGAGGCCTACACCTTCT 10656 Query 29297 GGAGCGGCGC-CGATGCGA--ATCGTGGGCGCGCGCCTAGCGATCGTATCCAGATCGACA 29353 ||| ||||| || | | | | || || ||| | || | | | | || ||||| Sbjct 10657 GGACCGGCGAGCGCTTCAACAAGGGTAAGCCAGCGGC--GCAA-CACACCAAGGTCGACG 10713 Query 29354 CGAGCCACGAAGCGCTCGTGCGAGGCATGCTGGGCGAGGACGAGCAGTGGCGTCAGATCG 29413 ||||| |||||| | || | | |||||||| | |||||| ||||||| Sbjct 10714 TTTCCCACGGGGCGCTCCAACAGGGGCGGTTCTGCGAGGACCGGTTGTGGCGGCAGATCG 10773 Query 29414 TCACCGTACTCGATGC-GATCGAGGGCGGCTGCGACTTGTTCGACCTGGAGAGACTT-CG 29471 ||||| | || || || || | | |||||||| || |||||||| | ||| || || || Sbjct 10774 TCACCATCCTGGACGCAGAGC-ACGGCGGCTGTGATCTGTTCGACATTGAG-GAGTTGCG 10831 Query 29472 GCGCCGGTACAGTGCAGAGGCTTTCGCGAACCTGCTGATGTGCCAGTTCATCGACGATTC 29531 || |||||| | ||||| ||||| |||||| ||||||| |||| | |||||| Sbjct 10832 TCGGGAGTACAGCCCTGAGGCGTTCGCCAACCTGTTGATGTGTGAGTTTGTTGACGAT-- 10889 Query 29532 GGTGTCGG--TGTTCAAGCTGGCCGAGCTGCAGCGCTGCATGGTCGACTCGTGGGAGGAA 29589 || | | | | || | |||| ||||||| |||||||||||||| |||| ||| Sbjct 10890 GGAGCCAGCATCTTTCCGTTGGCGTTGCTGCAGAGCTGCATGGTCGACAGTTGGGTTGAA 10949 Query 29590 TGGGCCGACGACTTCTCGCNNNNNNNNNNNCGTCCGTTCGGCTATCGCGAGGTGTGGGTT 29649 ||||| || |||| | || || |||||||| | || |||| ||| | Sbjct 10950 TGGGCAGAGGACTACAAGCCATTCGCCATGCGGCCGTTCGGTGACCGTCAGGTATGGATC 11009 Query 29650 GGCTACGATCCGGCGCTGACTGGCGACTCAGCCGGTCTCGTTGTCGTGGCGCCGCCGCGT 29709 |||||||| || ||| || || || | |||| || || || || |||||||||| Sbjct 11010 GGCTACGACCCAGCGGAAACCGGTGATTGCTCCGGGCTGGTGGTGGTTGCGCCGCCGCTG 11069 Query 29710 GTCGAGGGTGGGACGTTCCGCGTGCTCGAACGTCACCAGTTCCGCGGCAACGACTTCGAG 29769 || ||| || | |||||||| || || || ||||| ||||| |||| ||||| | | Sbjct 11070 GTACCGGGCGGCAAATTCCGCGTCCTGGAGCGGCACCAATTCCGGGGCATGGACTTTGCG 11129 Query 29770 GAACAGGCCGCGGCGATCGAACAGATCACGCAGCGCTACAACGTCGGCTATATCGCGATC 29829 | ||||| || ||| || | || | |||||| || |||||||| ||| Sbjct 11130 GCCCAGGCGGCATTTATCAAAAACGTCTGCGACCGCTACTGGGTGACCTATATCGGGATT 11189 Query 29830 GA---CACGACGGGCATGGGGCAGGGCGTCTATCAGCTCGTGCGGAAGTTCTACCCGGCG 29886 || ||| ||||| |||| ||||| ||||| ||||| |||||| |||||| Sbjct 11190 GATGTCAC--CGGGC-TGGGTAGCGGCGTGGCGCAGCTGGTGCGCCAGTTCTTCCCGGCT 11246 Query 29887 GCCGTTGCATTGAACTACTCGCCCGAGGTCAAAACTCGCCTTGTGCTGAAGGGGCAATCC 29946 | | || | ||| |||||||| |||||||| ||||| |||||||||| | | Sbjct 11247 GTGACCACCTTCAGCTATTCGCCCGAAGTCAAAACACGCCTGGTGCTGAAGGCCTATGAC 11306 Query 29947 GTCATCCGCAACGGCCGCCTGCAATTCGACGCGGGATGGACCGACCTGGCCGCGGCGTTC 30006 || |||| |||||||| ||| | |||||||| || ||||||||| |||| | || | Sbjct 11307 GTGATCCATAACGGCCGGCTGGAGTTCGACGCCGGGTGGACCGACATGGCGCAGTCGATG 11366 Query 30007 ATGGGAATCAAACAGACCATGACGGCGAGCGGCCGCCACGCAACGTACACCGCCGACCGC 30066 |||| ||| |||| | || || |||| ||||| || |||||||| | ||| Sbjct 11367 ATGGCGATCCGCAAGACGGTCACCGCAGGCGGTCGCCAGTACACCTACACCGCAGGGCGC 11426 Query 30067 AACGAAGAGACGGGCCACGCCGACCTGGCATGGGC 30101 ||||| | || ||||| ||||||||||| ||||| Sbjct 11427 AACGACAACACCGGCCATGCCGACCTGGCCTGGGC 11461 Score = 302 bits (334), Expect = 1e-77 Identities = 485/685 (71%), Gaps = 24/685 (4%) Strand=Plus/Plus Query 26416 CCAGCTCGATGTTTTCCGCGACGCAGCCGCAACCGAAGTCTTCGACGACATACGCGTCGT 26475 |||| ||||||||||| |||| || | || | | |||||| | ||| || ||||| | Sbjct 7748 CCAGTTCGATGTTTTCAGCGAGCGAGGCACATTCCAGGTCTTCAATGACGTATGCGTCAT 7807 Query 26476 TCGACGATTCGTAGTTCTCGATTTGGTCGCGCTTCGGGTTGTCGATCAGCGAGCGACGGC 26535 | ||| |||||||| ||||| |||| ||||| | ||||||| | | ||| |||| Sbjct 7808 TGACCGACTCGTAGTTTTCGATGCGGTCACGCTTGGCATTGTCGACGACGGTGCGGCGGC 7867 Query 26536 GCGCACCTTCCTGGAAGTAGATCGACAGGTTCTCCAGCTTCGTCACCATCATCGCGCGCT 26595 | |||||||| |||||||||||||||| |||||||| || |||| || | ||||| Sbjct 7868 GGCTGCCTTCCTGCCAGTAGATCGACAGGTTTTCCAGCTTGGTGACCAGCAACCCGCGCG 7927 Query 26596 TCGGGAAGAACGGCACACGCACGGCCGGCAGGTTGCCGATGCGCTTCTGGCTGACGATCA 26655 ||||||| | ||||| |||||||| |||| ||||| | |||||| || ||| || | Sbjct 7928 GCGGGAAGTAAGGCACGCGCACGGCTGGCAAATTGCCCAAGCGCTTTTGACTGGTGACGA 7987 Query 26656 GGTCGGCCGCGAGCTGCTCGGTCGGTGCCTGCGTC-GTGTTGACGATCGGGAAATACTTG 26714 ||||| || ||| || ||||| || | ||| |||||| |||||||||||||||| Sbjct 7988 TATCGGCGGCCAGCATTTCAGTCGGCGCGT-TGTCTTTGTTGATGATCGGGAAATACTTG 8046 Query 26715 TCGTGCAGCAGCTCGCGGCCGCAGATCACAACGAGCCCCGTGTCTTCCTGGAACCACGGG 26774 ||| |||||| | ||| ||||||||||| || || | | |||||||||| ||||||| Sbjct 8047 TCGGCCAGCAGTTGGCGACCGCAGATCACCACCAGATCAGGGTCTTCCTGGTACCACGGC 8106 Query 26775 TCGATCATCGACGACACGATGTCCATCACGAGCGCGTCGAGGTTCACGTAGTCGCCGCCC 26834 | || | | ||| ||| | || || ||||||||||| | |||| || Sbjct 8107 GCAATGAACTCTTCCACCATGCTGAATACCAGGGCGTCGAGGTTGGTGAAGTCTTTACCG 8166 Query 26835 TTACCGACGAGCACCTTGCCGGCTTCCTTCG-CACCTTCGTGCAGCACGCGATGCCCGGC 26893 ||||| | | ||||||| |||||| | |||| | || |||| | |||| Sbjct 8167 GCACCGATGGTGATTTTGCCGG-AGCCTTCGACCACTTCCTTCATGACGC---GGGCGGC 8222 Query 26894 G----CGGTCGCGATACTGTTGCAGCCAACCGATGTTCACGTCCTGCAACAGCGG---GT 26946 | ||| |||| || ||||||||||| ||||| |||||||| || || | Sbjct 8223 GTTTTCGG-CGCGCATCTTCTGCAGCCAACCAATGTTGACGTCCTGGCGAAGTGGATTGG 8281 Query 26947 TCGCTGCTTTGTCCGTCGACAGTGCCGCCTTTACGCCGTTCCAGCCGATCATGATCCGGT 27006 | |||| ||| ||||| | | || | | ||||||||||| ||||||| ||| |||| Sbjct 8282 TGGCTGGGTTGGACGTCG-CGGCGCGAC--TGACGCCGTTCCAACCGATCAGGATGCGGT 8338 Query 27007 CGAGCGCAGACTGG---TTGAGGATCACATTGCGGATGCGTTGCTGGAAGTCGGGGAATT 27063 | ||||| |||| || ||||| | | || || || ||||||||||||||| | Sbjct 8339 CCAGCGC---CTGGCGTTTCAGGATGGCGTCACGAATACGGGCCTGGAAGTCGGGGAACT 8395 Query 27064 TCGCCCAGGCGTCGAGCTTGCGGTA 27088 | ||||| || || | ||||| ||| Sbjct 8396 TGGCCCACGCATCCAACTTGCTGTA 8420 Score = 210 bits (232), Expect = 5e-50 Identities = 316/445 (71%), Gaps = 8/445 (2%) Strand=Plus/Plus Query 30627 GTGAACGGCTGGCAGGACAAGCACGAGTTCGAGCCGGGCAGCGTGTTCCAGCTCATGCGA 30686 ||| | |||||| |||| | ||| |||| |||||||| || | || || || |||| Sbjct 11963 GTGCAAGGCTGGAAGGATGAACACCAGTTTGAGCCGGGAAGTATTTTTCATCT---GCGA 12019 Query 30687 C---CGGACATCAACCAGGAGGTGTACGGCCTGCCCGAATATCTCAGCTCGCTTCACTCG 30743 |||| | |||||||| | || ||| |||| || | | || | | || ||| Sbjct 12020 GAAGCGGATTTGCACCAGGAGATTTATGGCTTGCCGGAGTGGATTAGTGCCTTGCAGTCG 12079 Query 30744 GCCTGGCTGAACGAGTCGTCGACGCTGTTCCGGCGGAAGTATTACGAAAACGGTAGCCAC 30803 || | ||| ||||| ||| | ||| ||||||| || ||||| ||||| || || || ||| Sbjct 12080 GCGTTGCTCAACGAATCGGCCACGTTGTTCCGCCGCAAGTACTACGAGAATGGCAGTCAC 12139 Query 30804 GCCGGCTTCATCCTCTACATGACCGACGCGGCGCAGAAGCAGGAGGATGTCGACAACATG 30863 ||||||||||| |||||||||||||| || || |||| | ||| ||||| || Sbjct 12140 GCCGGCTTCATTCTCTACATGACCGATGCCGCACAGACTGAAACCGATATCGACGCTTTG 12199 Query 30864 CGCACGGCGTTGAAGAACGCGAAGGGGCCGGGCAATTTCCGCAACGTGTTCATGTACGCG 30923 |||| ||| | ||| || | |||||||| |||||||| |||||| |||| |||| || Sbjct 12200 CGCAAGGCTCTCAAGGACTCCAAGGGGCCAGGCAATTTTCGCAACTTGTTTGTGTATTCG 12259 Query 30924 CCGGGCGGGAAAAAGGACGGTATCCAGCTCATCCCAGTGTCCGAGGTCGCGGCGAAGGAC 30983 || ||| || |||||||| || ||||| ||||| || ||||| ||||| ||||| Sbjct 12260 CCCACCGGCAAGAAGGACGGGATACAGCTGATCCCGGTCAGTGAGGTGGCGGCCAAGGAT 12319 Query 30984 GAGTTCTTCAACATCAAGAACGTGACGCGCGACGACCTGCTCGCCGCGCAT-CGCGTGCC 31042 || ||| | ||||| ||| || || ||||| |||| ||| || | || | || Sbjct 12320 GAATTCAACTCGATCAAAAACCAAACCCGTGACGATGTGCTAGCC-AGCTTGCGTATTCC 12378 Query 31043 GCCGCAACTGCTCGGTATCGTGCCG 31067 ||||| ||| | || || |||||| Sbjct 12379 ACCGCAGCTGATGGGCATTGTGCCG 12403 Score = 87.8 bits (96), Expect = 4e-13 Identities = 152/220 (69%), Gaps = 6/220 (3%) Strand=Plus/Plus Query 24983 TCGGGCATGTCGACGACGGTTCCCATCGGCAGCACGACGCCCAGCTCGGCGAGGCCGGGA 25042 |||||||||| ||||| || |||||| | ||| | ||||| |||||||| Sbjct 6305 TCGGGCATGTTGACGATAAGACCTTGCGGCAGGATCGGGCCGTGGTCGGCCAGGCCGGGG 6364 Query 25043 TTGGCTTCCAGGACCGCTTCGACGGTGCCGGCCGTGCTGGCGTAGTGCCGCCAGCAAAGG 25102 |||||||| || || || ||| |||||| |||| | ||||||||||||||||||| Sbjct 6365 TTGGCTTCAAGCACGGCCTCGGTAACGCCGGCAGTGCGGCCGTAGTGCCGCCAGCAAAGC 6424 Query 25103 GCGTCGAGCGTTTCACCCTG--AAGCG----TGGCGACCTTCATCAGATCAGTTCAACCG 25156 ||||||| || || || ||| |||||| |||||||||| || || | Sbjct 6425 GCGTCGACGGTGTCGTTTTGGTTGGCGCGAACGGCGACGGCCATCAGATCAACTCCACGG 6484 Query 25157 TCGAGCGCGCGACGCCCAGGATGTCGCTGATGGCCCACCG 25196 | | ||| ||| ||| || | ||||| | ||||| || Sbjct 6485 TGGTGCGGCCGATGCCGAGAAAGTCGCGAACCGCCCAACG 6524 >seq3088488 Length=17142 Score = 324 bits (358), Expect = 3e-84 Identities = 781/1165 (67%), Gaps = 38/1165 (3%) Strand=Plus/Plus Query 14121 GGCGAAATCGGCGAGATAGCGATCGGTGATGCGCTGGCGCAGCTTCAGGTTTTCGAGCGG 14180 |||||| ||| || || || |||||||| |||||||| | | |||| ||| || || Sbjct 15477 GGCGAAGTCGATCAGGTAACGGTCGGTGATTCGCTGGCGGAAGGTGAGGTCTTCAAGTGG 15536 Query 14181 CGGGACCGGCGTGTAGTCGTAGTCGATCCATGTACCGCCCGACGTCAGCTCGTCGGTCGT 14240 ||| || || ||||||||||| || | ||| ||| | | | || ||| | || Sbjct 15537 CGGCACGGGGGTGTAGTCGTAATCAAGCCAGAGCTTGCCGGCCTTGAGGGTGTCTTTGGT 15596 Query 14241 GTTC--GGC-TCCGGGTCGTACCAGGCGCCGCCACCGATCAGCTCGCCGACCGAGACTTC 14297 ||| | | ||||||| |||| | ||| |||||||| | ||| | | || ||| Sbjct 15597 GTTGATGTCGTCCGGGTT---CCAGCAACTGCCGCCGATCAGGTAGCC--CTGGGATTTC 15651 Query 14298 GCG--GCGGAACCACGCGTTGATGTTCTCGATGATGTcgcgcgcgcgcgACGGGTTGAGC 14355 ||| | | ||| | | | |||| | |||||| | | || | || | Sbjct 15652 AACTCGCGCATCTTGGCGCTTACGCCTTCGACCAGGTCGCGTACCAGGGAGGCGTGCATA 15711 Query 14356 GGGCCGTCGACGACGCCCATCTGTTCCTCGGCGATCGTGTCAGCGATCACCTGTGCCGAA 14415 |||| ||| || | | ||| || | ||| | || ||||| |||| | ||| || | Sbjct 15712 GGGCGGTCAACTGCCCACATGTGCGCTTCGCCCATGGTGTCCGCGAGGATCTGCGCGGTG 15771 Query 14416 CGCGTGTAGTTCTCGAAGAAGAACTTGCCGTCCGCGTCGCACGTGCGCGAGCCCCAGAAA 14475 || |||||||| |||||| |||| ||| | ||| ||||| |||||||| Sbjct 15772 CGGGTGTAGTTTTCGAAGGCGAACAACGGGTCATCACTGCAGGTGCGGCTACCCCAGAAG 15831 Query 14476 CGGAAGCCGTTTCGGTTGACGAGCGTGGTGACCTGGTTCTCGTTCAGATAGCCGGCGTCC 14535 || || ||||| ||||| || |||||||| | ||| ||| || ||| |||||| Sbjct 15832 CGAAAACCGTTGGCGTTGATCAGGGTGGTGACGTCGTTGCTGTTGAGGTAGTTGGCGTCG 15891 Query 14536 GTTGCCGGGTCTTGCAAATCCCACGACACGTCCGCGCTGATGCCGGTCACGCCGTTGACG 14595 || || |||| ||||| |||||| ||||||| |||||||| ||||||||||| | ||| Sbjct 15892 GTGGCTGGGTTTTGCAGATCCCAGAACACGTCGGCGCTGATACCGGTCACGCCACTCACG 15951 Query 14596 ACGACGTTCGACAGCGTCTTGTGCCAGCCGATGTCGTTGTCGATCTTCGCGCGCAGGCC- 14654 | ||||| ||||| || || ||||| || | || | ||||||||| ||||| ||||| Sbjct 15952 GCCACGTTGGACAGGGTTTTATGCCAACCCGTCTCTTGGTCGATCTTGGCGCGAAGGCCG 16011 Query 14655 -CGCCGCGATCGCCGG-CGCCGGGATGGCGACGGTCGAGTTCGTTATGTCGTCCCAGCCG 14712 | |||| | ||| || | | ||| ||||| ||| || | ||||||| Sbjct 16012 AGGGCGCGGGCCACGGCCGAAGCGCTGG---CGGTCTTGTTGGTGACAGTGTCCCAGTTC 16068 Query 14713 AGCCAATCCGGCCAGATCACCATGATTTCGCGCTGGCCGAACTGCTTGCGGTACGCGACC 14772 || | |||||||| |||||||| |||||||| ||||| | || ||||||||| || Sbjct 16069 AGGAAGTCCGGCCAAATCACCATCATTTCGCGGGCACCGAAGTTCTCGCGGTACGCCACT 16128 Query 14773 GCCTCTTCCTTCGTCTTGCAG--CCGTGCGCGGCGACGTACACCATCGCGCGCAGCGATT 14830 |||||||||| || |||||| || |||| ||||| | | |||||||| || Sbjct 16129 ACCTCTTCCTTGGTTTTGCAGTTCCAGGCGC--TTACGTATGCAAAGGCGCGCAGGTCTT 16186 Query 14831 GCGCGATCGTCGCGAATGCTGCGGCGACGGGCTGCGTGTCGAGGCCGGGCGCGACCAGGA 14890 ||||| | ||| || | ||| || ||| |||||||||| ||| || | |||| Sbjct 16187 TGGCGATGGCGCCGAGGGCGGTGGCTACTGGCAAACTGTCGAGGCCTGGCACGCCAAGGA 16246 Query 14891 TGCGCGGCTTCACGGCGA-GCTTCCCCTGCGCGGCCAGCAACGCCTTCATGCCGGTGTAT 14949 | ||||| ||| | | | || | || || || |||| || ||||||||||||||| Sbjct 16247 TACGCGGAGTCATGCCCACGCGTGATTTG-GCTGCGAGCAGAGCTTTCATGCCGGTGTAT 16305 Query 14950 TTGCCGTCCGGCGTGACGGTGCCGAT---GACGTTCGCGGTCGTCTCGGCTTCGTCCTTT 15006 | ||| || || ||| || | || ||| |||||| |||||||| Sbjct 16306 TGACCGGTTGGTGTTGTACCGCCAATCAGGGCGCTCGTAGTCGTC---GCTTCGTCAGCG 16362 Query 15007 CCTTCCGCGACGCGCACGACGACGGTGACG---GGCTTCGTCTGCTTGCCGATCGCGT-C 15062 ||||| ||| || || |||| | ||| ||||| ||||| | | |||| | | | Sbjct 16363 CCTTCTTTGACCCGTACCACGA---TAACGTAAGGCTTGGTCTGGTCGGCGATGCCTTGC 16419 Query 15063 GAGCGTGCGGCGCAGCGTGCCCTTCGTGCCGGCCTTGCCAAGCGCCGCGATG-ACGTTCG 15121 || || || ||| |||||||| |||||||||||| | || || || ||||| | Sbjct 16420 AGGCTGGCAGC-CAGGGTGCCCTTGACGCCGGCCTTGCCGA-CGGCGGTTTGCACGTTGG 16477 Query 15122 TCAGCAGCACCGGCGTGTCGAGCGGGAACGTCGCCGGGTCGGCGNNNNNNNNNNTGCAGA 15181 | | || || || ||||| || ||||| ||||| || |||| | Sbjct 16478 TGATGAGGACTGGAGTGTCCAGAGGGAAAACGAGTGGGTCCGCATCTTCAGCGGTGCAAA 16537 Query 15182 CGATGCCGAGCACGGCCGTGGAGACCGTGCGAATCGGCCGGCCGCCTTCGTTGATTTCGA 15241 | ||||||| || || |||| | |||||||| || ||| ||| ||||||| ||||| Sbjct 16538 CCATGCCGATGACTGCGGTGGGAATAGTGCGAATGGGGCGGGTGCCGTCGTTGAGTTCGA 16597 Query 15242 TGACGCGTACGCCGTGGTGGTAATC 15266 |||| || ||||||||| | ||||| Sbjct 16598 TGACCCGCACGCCGTGGAGATAATC 16622 Score = 98.7 bits (108), Expect = 2e-16 Identities = 179/260 (69%), Gaps = 3/260 (1%) Strand=Plus/Plus Query 13049 CTTCGTATCCGGGCGCGCTCGCGCCAATCCATCAGCTCAGAAAGTGAAAAGTCGTCCATG 13108 || |||| || |||||| |||||||| |||||||| || || || | ||||| Sbjct 14392 CTCCGTACCCTGGCGCGTTCGCGCCAGTCCATCAGGTCTTGCAGGCCCAACTGATCCATA 14451 Query 13109 TCGCGCGGTGTCCAGCCGAACACCGTCGCGACGTCGGCCATCGCGTCTTCTACGCGTTCT 13168 || ||||| |||| || ||| || | |||||||| ||||| |||||||| Sbjct 14452 TCAGCCGGTGCCCAGTGAAAAACCACAGCCAGATCGGCCATGGCGTCCTCTACGCGACGA 14511 Query 13169 GGGATTCCATGCTCGCTTTCAGCGCCTTCGGCATCAAAAAACCGGCAAAAATACCCCCCA 13228 ||||| | || | | ||| || |||| ||| ||||||||||| | | | | || Sbjct 14512 GGGATGC-ATCC--GTCTTCGCCGACTTCTGCAACAAAAAACCGGAGATTTTGCTGCTCA 14568 Query 13229 ATGCCACGAGGTCGGCCGGGTCCATCAACGTGACATCCATTTCGGTCAGCGTCGGCGTGG 13288 |||| ||||||||||||||||| | ||| || | |||| || | |||||| Sbjct 14569 GGGCCAGTAGGTCGGCCGGGTCCATGCCGGCGACTTCGACGACGGTGAGGCTTGGCGTGC 14628 Query 13289 TGATGCGCGGGAGTACCTTG 13308 |||| ||||| || |||||| Sbjct 14629 TGATACGCGGCAGAACCTTG 14648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124899186392894