Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_015273.1
Length=32317
Score E
Sequences producing significant alignments: (Bits) Value
seq3088503 446 3e-121
seq3088488 370 2e-98
seq3053335 118 2e-22
seq3063309 84.2 4e-12
>seq3088503
Length=21467
Score = 446 bits (494), Expect = 3e-121
Identities = 939/1396 (67%), Gaps = 14/1396 (1%)
Strand=Plus/Plus
Query 25122 AACGATTTCAGCGACGAGCAGATCGCACGGCTTCACGAGGCCTTTCTTGATTGCCAGTTC 25181
|||||| ||||||| |||||||||| | | | | || || ||| | || || |||
Sbjct 10152 AACGATATCAGCGAAGAGCAGATCGAGCTGTTGCGTGAAGCGTTTATCGACGGCTGTTTC 10211
Query 25182 GGTTATCAAAAGGTGTGGTATCGAAACGGCCATCAGCGCACGCGCAACATTCTCAAGTCG 25241
| || || || | ||||| || ||| |||| || || ||| ||| |||||
Sbjct 10212 GACTACCAGAAAGACTGGTACCGGGCTGGCAATCAACGGACTCGCGTCATCCTCAAAAGC 10271
Query 25242 CGGCAGATCGGCGCGACGTTCTATTTCGCACGCGAGGCGCTAGACGATGCCTTGCAGACT 25301
||||||||||||||||| | || || || ||||||||| | ||||| || | ||
Sbjct 10272 CGGCAGATCGGCGCGACCTATTACTTTGCCCGCGAGGCGTTTCTTGATGCGCTGGAAACC 10331
Query 25302 GCACGCAATCAGATTTTTCTATCGGCCAGCAAGGCGCAGGCGCACGT-TTTCAAGTCGTA 25360
| ||||||||||| || || || || || || || | | |||| | |||
Sbjct 10332 GGGCGCAATCAGATCTTCCTGTCCGCATCGAAAAACCAAGCCTATCTGTTTCGCGG-GTA 10390
Query 25361 CATTC-GGCAGTTTGCCGCCGAGGCCGCCGAGGTCGAATTGACCGGCGACCCGATCATTT 25419
||| | |||| |||||| |||| || ||||| |||| || || || ||| | |
Sbjct 10391 CATCCAGGCA-TTTGCCCGTGAGGTTATCGGTGTCGAGCTGACGGGGGATCCCATCGTAT 10449
Query 25420 TGCCGAACATGGCAGAGTTGATTTTCCTCGGCACGAATTCGCGAACGGCGCAGAGCTATC 25479
|||| ||| || ||| || |||||||||| || ||| |||| || || ||| |||| |
Sbjct 10450 TGCCCAACGGCGCCGAGCTGTTTTTCCTCGGTACCAATGCGCGTACCGCCCAGGGCTACC 10509
Query 25480 ACGGCAATTTCTATTTCGACGAGTATTTTTGGGTGAGCGGGTTTCGCCAGCTCAACAAGG 25539
||||||||||||| |||||||| | || ||| | | |||| | || |||||||
Sbjct 10510 ACGGCAATTTCTACTTCGACGAATTCTTCTGGACGTTCAAGTTTGAGGAACTGAACAAGG 10569
Query 25540 TTGCATCGGGCATGGCGATGCACAAGAAATGGCGAAAGACGTATTTTTCAACGCCGTCGA 25599
| || ||||||||||| ||||||||||| ||||| || || || || || |||||||| |
Sbjct 10570 TCGCTTCGGGCATGGCCATGCACAAGAAGTGGCGCAAAACCTACTTCTCGACGCCGTCCA 10629
Query 25600 GCATCACGCACGAGGCTTACACCTTCTGGAGTGGCGAGCACTACAACAGGGGCCGCGCAA 25659
|||| | || ||||| ||||||||||||| ||||||| || ||||| ||| ||
Sbjct 10630 GCATGGCCCATGAGGCCTACACCTTCTGGACCGGCGAGCGCTTCAACAAGGGTAAGCCAG 10689
Query 25660 AGGCCGATCACATTCATCTCGATATTTCGCACTCGGCGCTCGCTCGCGGCCGGCTCTGCG 25719
||| | |||| | |||| |||| ||| ||||||| | || ||| ||||||
Sbjct 10690 CGGCGCAACACACCAAGGTCGACGTTTCCCACGGGGCGCTCCAACAGGGGCGGTTCTGCG 10749
Query 25720 AGGATCGACAGTTTCGCCAGATCGTGACGGTCGAGGATGCCGTCGCCGGCGGTTGCGACT 25779
|||| || || || |||||||| || || ||| || | |||||| || ||
Sbjct 10750 AGGACCGGTTGTGGCGGCAGATCGTCACCATCCTGGACGCAGAGCACGGCGGCTGTGATC 10809
Query 25780 TGTTCGATATCGACGAGCTGCGCCTTGAATACAGCGCGCAGGAATACGCGAATCTGTTGA 25839
||||||| || || ||| |||| | || |||||| | ||| | ||| || |||||||
Sbjct 10810 TGTTCGACATTGAGGAGTTGCGTCGGGAGTACAGCCCTGAGGCGTTCGCCAACCTGTTGA 10869
Query 25840 TGTGTCAGTTTATCGACGATACCGCGTCGATCTTTCCGCTCGCCGAGCTGCAACGCTGCA 25899
||||| ||||| | |||||| || ||||||||| | || |||||| ||||||
Sbjct 10870 TGTGTGAGTTTGTTGACGATGGAGCCAGCATCTTTCCGTTGGCGTTGCTGCAGAGCTGCA 10929
Query 25900 TGGTCGACTCGTGGGAAGAATGGGCCGACGATTTCAAGCCGCTCGCGCCCCGCCCTTTCG 25959
|||||||| |||| |||||||| || || | |||||| |||| || || ||||
Sbjct 10930 TGGTCGACAGTTGGGTTGAATGGGCAGAGGACTACAAGCCATTCGCCATGCGGCCGTTCG 10989
Query 25960 GGTTCCGGCCGGTATGGGTTGGCTACGATCCAGCGCTTTCCGGCGACTCGGCCGGCCTTG 26019
| ||| | ||||||| | |||||||| |||||| |||| || | |||| || |
Sbjct 10990 GTGACCGTCAGGTATGGATCGGCTACGACCCAGCGGAAACCGGTGATTGCTCCGGGCTGG 11049
Query 26020 TCNNNNNNNNNNNNNNNNNNNTGCCGGGGGGCAAGTTCCGCGTATTGCACAAGTGCCAAT 26079
| | ||||| ||||| |||||||| || | | |||||
Sbjct 11050 TGGTGGTTGCGCCGCCGCTGGTACCGGGCGGCAAATTCCGCGTCCTGGAGCGGCACCAAT 11109
Query 26080 TTCGCGGCATGGATTTCGAGGGGCAAGCCGAGGCGATTCGACAGATCACTCAGCAA---- 26135
| || |||||||| || | || || || ||| ||| || | || || |
Sbjct 11110 TCCGGGGCATGGACTTTGCGGCCCAGGC---GGC-ATTTATCAAAAACGTCTGCGACCGC 11165
Query 26136 TACAACGTCGAATATATGTCGATCGATACGACGGGCATCGGCCAGGGTGTTTATCAGCTC 26195
||| || ||||| ||| ||| || || | || || || |||||
Sbjct 11166 TACTGGGTGACCTATATCGGGATTGATGTCACCGGGCTGGGTAGCGGCGTGGCGCAGCTG 11225
Query 26196 GTCAAACAGTTCTATCCGAGCGCGGTCGCGCTCAACTATTCGCCCGAAATCAAGGGGCGT 26255
|| ||||||| ||| | | | | ||| ||||||||||||| |||| ||
Sbjct 11226 GTGCGCCAGTTCTTCCCGGCTGTGACCACCTTCAGCTATTCGCCCGAAGTCAAAACACGC 11285
Query 26256 CTCGTGCTTAAGGGCT-TGTCGGTGATCGGCAAGGGCCGGCTCGAATTCGATGCCGGTTG 26314
|| ||||| |||| || || | |||||| || |||||||| || ||||| ||||| ||
Sbjct 11286 CTGGTGCTGAAGGCCTATGAC-GTGATCCATAACGGCCGGCTGGAGTTCGACGCCGGGTG 11344
Query 26315 GACAGACCTAGCGCAATCCTTCATGGCCATTCGGAAAACCATGACGGCGAGCGGCCGAAA 26374
||| ||| | ||||| || | ||||| || || || || | || || |||| || |
Sbjct 11345 GACCGACATGGCGCAGTCGATGATGGCGATCCGCAAGACGGTCACCGCAGGCGGTCGCCA 11404
Query 26375 GGTGACATACGAGGCGAGCCGCAGCGAGGAAACCGGCCACGCCGATCTAGCGTGGGCGTG 26434
| || ||| || | |||| ||| | |||||||| ||||| || || ||||||
Sbjct 11405 GTACACCTACACCGCAGGGCGCAACGACAACACCGGCCATGCCGACCTGGCCTGGGCGCT 11464
Query 26435 CCTGCACGCGCTCGATAACGAGCCGCTAGAGGGCACGACCGCAAACAATACCGGCTTTAT 26494
| ||||| | | ||||| ||||| ||||| |||||| ||||||||| ||
Sbjct 11465 ATTTCACGCATTGCAAAACGAACCGCTTGAGGGGCAGACCGCCTCCAATACCGGGCGAAT 11524
Query 26495 GGAGTTCTCTTAATGA 26510
|||| | | || ||||
Sbjct 11525 GGAGATTTTTTGATGA 11540
Score = 306 bits (338), Expect = 7e-79
Identities = 900/1364 (66%), Gaps = 41/1364 (3%)
Strand=Plus/Plus
Query 22149 GCGATATCGAGCGCGCCGGCGAAGTCGCCCACGTCGACGCGCCAGATCATTACGGTCGTG 22208
||||||||||| |||| | |||||||| | |||| |||||| | |||||| || ||
Sbjct 7415 GCGATATCGAGGCCGCCCGTAAAGTCGCCAGCATCGAAGCGCCAAACCATTACCGTGGTC 7474
Query 22209 AGCACATCGTCTTGAGCGCCCCGCCCGCCACTCAGCGCGCCGGCGACATATTCGACGTAT 22268
| || |||||||| |||||| | ||| | |||| | || |||||| || |||
Sbjct 7475 ATTACCTCGTCTTGTGCGCCCTGACCGGCCTCCAGCACTCCCTGGACATAAGGGATGTAG 7534
Query 22269 TCGGGCAGCAGCTCGGCGCGCTTCACTTCGATTTTTCGCGCGATCGACTTGATTTCCTTG 22328
|||||||||| | | ||||| | |||| ||| | | | | |||| | | ||
Sbjct 7535 TCGGGCAGCAATTGG---CGCTTGAGTTCGGCTTTGCCCTGGTTTGACTGCACCTGTTTC 7591
Query 22329 AGTCGTCGCCGATCGA-TCGCGAGTTTCGCAAGCATCAGCTCGTAAGCGCTT---CCGAC 22384
|| || | ||||| | || |||| ||| |||||||||| | ||| |
Sbjct 7592 AGGCGCAGGCGATCCTGTAGC-AGTTGGTTGAGCTGGTGCTCGTAAGCCGTGGCGCCGGC 7650
Query 22385 CATTGTTTCGCCCG---CGCCGGCCGAGGCCGACGCGAGGCTTGCCGATACGCGCTGAAA 22441
||| |||| || | |||||| ||| | | ||| || | | || |||||
Sbjct 7651 CATGGTTTGAGTCGGTTCAACGGCCG---CCGCCTCCAGGGCGGCAGTGATACGTTGAAA 7707
Query 22442 ATGGCGTCGTGCGGGGCTAGTCATCGCGTCATGCCTCCGTTACGCCGCCGGCGCGATTTC 22501
|| || || || | ||||| | || | | || ||| ||| | |||
Sbjct 7708 GTGACGACGGCAAGGATTGGTCATGG--TCG-GTCGCC-TTATGCC---------AGTTC 7754
Query 22502 GATGTTCTCGGCAACAGCAGCGCGGCCGAGGTCTTCGACGACATACGCATCGTTCGACGA 22561
|||||| || || | | || | | |||||||| | ||| || || || || |||
Sbjct 7755 GATGTTTTCAGCGAGCGAGGCACATTCCAGGTCTTCAATGACGTATGCGTCATTGACCGA 7814
Query 22562 TTCATAGTTCTCGATACGGTCGCGCTTCGCGTTGTCGACGATCGTGCGACGCCGTGCGCT 22621
|| ||||| ||||| ||||| ||||| || |||||||||| ||||| || || ||
Sbjct 7815 CTCGTAGTTTTCGATGCGGTCACGCTTGGCATTGTCGACGACGGTGCGGCGGCGGCTGCC 7874
Query 22622 GTCTTGAAAGTACAGAGACAGATTGTCGAAACTCGTCACCATCACGGCATTGGCCGGGAA 22681
|| || |||| | ||||| || || | | || |||| || | | ||||||
Sbjct 7875 TTCCTGCCAGTAGATCGACAGGTTTTCCAGCTTGGTGACCAGCAACCCGCGCGGCGGGAA 7934
Query 22682 GAAAGGCACGGTCACGGCCGGCAGGTTGCCGATGCGCTTCTGGCTCTGGATCACGTCAGC 22741
| |||||||| |||||| |||| ||||| | |||||| || || || | || ||
Sbjct 7935 GTAAGGCACGCGCACGGCTGGCAAATTGCCCAAGCGCTTTTGACTGGTGACGATATCGGC 7994
Query 22742 GGCCATCATTTCGGTCGGCGCTTGGGCCTTGTTGACGAGCGGGAAATACTTGTCGTGCAA 22801
||||| |||||| |||||||| | | | ||||||| || |||||||||||||||| ||
Sbjct 7995 GGCCAGCATTTCAGTCGGCGCGTTGTCTTTGTTGATGATCGGGAAATACTTGTCGGCCAG 8054
Query 22802 CAGGCCGCGACCGCACATCACGACGAGAGCCGTGTCGTCTTGGTGCCACGGGTCGATCAT 22861
||| ||||||||| ||||| || ||| | | ||| || |||| |||||| | || |
Sbjct 8055 CAGTTGGCGACCGCAGATCACCACCAGATCAGGGTCTTCCTGGTACCACGGCGCAATGA- 8113
Query 22862 GCTC-GCGACCAGATCGGCGACGAGCGCATCGAGGTTCGCGTAATCGCCGGCCGCGCCGA 22920
||| | |||| | || || || |||||||| | | | || | || ||||
Sbjct 8114 ACTCTTCCACCATGCTGAATACCAGGGCGTCGAGGTTGGTGAAGTCTTTACCGGCACCGA 8173
Query 22921 CGACGATCTTGCCGGCCGTCTTCG-CGCCTTCGTCCATCACGCGTTGCGG-GGCTTGGTC 22978
| ||| ||||||| | ||||| | |||| | ||| ||||| |||| | || | |
Sbjct 8174 TGGTGATTTTGCCGG-AGCCTTCGACCACTTCCTTCATGACGCG-GGCGGCGTTTTCGGC 8231
Query 22979 GCGCATGCGTTGCAACCAGCCCTTATTGACGTCCTGCAACAGCGGGTTAGCTGCACGGTC 23038
|||||| |||| ||| || | ||||||||||| || || || | || |||
Sbjct 8232 GCGCATCTTCTGCAGCCAACCAATGTTGACGTCCTGGCGAAGTGGATTGGTGGCTGGGTT 8291
Query 23039 GGACGTTGCCGCACG-CGAACGGCCGTTGAAACCGATCGCGATGCGGTCGAGCGCTTGAC 23097
|||||| || || || | || |||||| |||||||| ||||||||| ||||| || |
Sbjct 8292 GGACGTCGCGGCGCGACTGAC-GCCGTTCCAACCGATCAGGATGCGGTCCAGCGCCTGGC 8350
Query 23098 GGCGCACGATCACGTCGCGAATGCGGGTCTGGAAGTCGGGAAACTTCGCCCACGCGTCGA 23157
| || ||| |||| ||||| |||| |||||||||||| ||||| |||||||| || |
Sbjct 8351 GTTTCAGGATGGCGTCACGAATACGGGCCTGGAAGTCGGGGAACTTGGCCCACGCATCCA 8410
Query 23158 GC-AGCGCATACGTGATGTGCGAGTCGAAATTCGTTTGCGTGCAGTTGTAACCGTTCTCG 23216
| || ||| || ||| | ||||| || || |||| |||| ||| || ||
Sbjct 8411 ACTTGCTGTAACG-GAGGTGGGTATCGAAGTTGGTCTGCGAGCAGAAGTAGCCACGGTCA 8469
Query 23217 TCGAGGTCGGTCACATCAGCCGTTGCGCGATCCTTCTGCGTCGTGTCGGTCGTGCTCGCG 23276
||||| | | | || ||| |||| || || | || || || |||| |||
Sbjct 8470 TCGAGTGTGCTGATGTCGCTGGTTTCGCGCTCTTTGGTATTTGTATCAGTGGTGCCGGCG 8529
Query 23277 ATCGGCGAGCCGACGCCGAGGCCGAGCTTTGCGCCTTCCTTGTCGGTCACGCCGATAACG 23336
||||| ||||| ||| | ||| | || |||| || |||| |||||| | |
Sbjct 8530 TTCGGCCCGCCGATGCCCATGCCAATTTTCTCGCCCATCTGCTCGGCGACGCCGTAGATG 8589
Query 23337 TTGATGCGTTTCAGAAAGTCGCTCGATTCCTGAATGCGGGTTTCGAGCTTTTGTTGCACG 23396
|||||| ||| || | || || ||||| || ||| |||| || |||| |||
Sbjct 8590 TTGATGGCGCTCAAGAACTGACTGGACTCCTGCATCCGGTTTTCCAGGGTTTGGGTGACG 8649
Query 23397 CTCGGCGACACGGCGAATTTCTTCGTCGCGTTCGGGATGCCGTTGAGCTTGGC--GATCG 23454
|| || | ||| ||||| | || ||| || | || || ||||||||| | | |
Sbjct 8650 CTGGGGGCGGTGGCAAATTTGGTGGTGACGTCGGGCACGCTGTGGAGCTTGGCCAGTTGG 8709
Query 23455 CTTCGAGGAATTGATCGAAAGCGAACCGGGTTTCGTTGCGCATG 23498
| | ||| | | ||| || ||||| ||||||||||||
Sbjct 8710 C--CCAGGTAGGCGTTGAAGACGGTACGGGTATCGTTGCGCATG 8751
Score = 187 bits (206), Expect = 5e-43
Identities = 265/370 (72%), Gaps = 2/370 (1%)
Strand=Plus/Plus
Query 27026 CAAGAGGTGTACGGCTTGCCCGAATATCTCGGCGCGCTGCACTCGGCATGGTTGAACGAG 27085
|| ||| | || |||||||| || | | | || |||| ||||| | | | |||||
Sbjct 12035 CAGGAGATTTATGGCTTGCCGGAGTGGATTAGTGCCTTGCAGTCGGCGTTGCTCAACGAA 12094
Query 27086 TCGGCGACGCTCTTTCGTCGCAAGTATTACGAGAATGGATCGCACGCCGGTTTCATCCTG 27145
||||| ||| | || || |||||||| ||||||||||| |||||||| ||||| ||
Sbjct 12095 TCGGCCACGTTGTTCCGCCGCAAGTACTACGAGAATGGCAGTCACGCCGGCTTCATTCTC 12154
Query 27146 TACATGACCGATGCGGCGCAAAGTCAAAGCGATGTCGACAAGATGCGCGAGGCGTTGAAG 27205
|||||||||||||| || || | | ||| |||| ||||| ||||| |||| | |||
Sbjct 12155 TACATGACCGATGCCGCACAGACTGAAACCGATATCGACGCTTTGCGCAAGGCTCTCAAG 12214
Query 27206 AACAGCAAGGGGCCGGGGAATTTCCGAAACCTTTTCATGTACGCGCCGAACGGCAAGAAA 27265
|| ||||||||| || ||||| || ||| | || |||| |||| | |||||||||
Sbjct 12215 GACTCCAAGGGGCCAGGCAATTTTCGCAACTTGTTTGTGTATTCGCCCACCGGCAAGAAG 12274
Query 27266 GACGGCATCCAGCTCATTCCGGTTTCCGAGGTCACGGCGAAAGACGAGTTCTTCAACATC 27325
||||| || ||||| || ||||| ||||| |||| || || || ||| | |||
Sbjct 12275 GACGGGATACAGCTGATCCCGGTCAGTGAGGTGGCGGCCAAGGATGAATTCAACTCGATC 12334
Query 27326 AAGAATGTCACGCGCGACGACTTGCTCGCGGCGCAT-CGCATCCCGCCTCAGCTCATGGG 27384
|| || || || ||||| |||| || || | || || || || ||||| |||||
Sbjct 12335 AAAAACCAAACCCGTGACGATGTGCTAGC-CAGCTTGCGTATTCCACCGCAGCTGATGGG 12393
Query 27385 GATCGTGCCG 27394
|| ||||||
Sbjct 12394 CATTGTGCCG 12403
Score = 149 bits (164), Expect = 1e-31
Identities = 286/419 (68%), Gaps = 17/419 (4%)
Strand=Plus/Plus
Query 23941 TCGGGTTCT-GAGCTGCGAAAGAAAGGATTTCGGTGCCGAGGCTCGCGGGGCTATCGGTC 23999
||||||| | | || | ||| | || | || || || | ||| || ||| |||||
Sbjct 9191 TCGGGTTTTTGCGCGGAGAAGGCGAGTAGGTCAGTACCCAAGCTGGCAGGGGAGTCGGTG 9250
Query 24000 ACGGCGAGGCCGATGAGATACGCCTGTTTCGTGTCGGCGAA--TGACGGGTCGATTTCGC 24057
|| || || |||| || || || | ||||||||||| || || |||||||||
Sbjct 9251 ACTGCCAGACCGACGATGTAGGCTTCCCCTGTGTCGGCGAAGCTGTCG--TCGATTTCGA 9308
Query 24058 ACGAGGTGTAAATCTTTTGCTTCGCCTTCGTCATCGCGACCAGCTCGGCAGTCGGCTCGA 24117
|||||||| | ||| ||| | ||||| |||| |||| ||| |||| ||||| ||||
Sbjct 9309 TGGAGGTGTAGACCTTCTGCCTGGCCTTGTTCATGGCGATCAGTTCGGGCGTCGGTTCGA 9368
Query 24118 TTTGCGCGAACAGTCCGAGCTT------GCCGGCGAATTCGCCCGTGAGTTCTTGCGTTT 24171
||| |||||||| | | ||| |||| || ||| | ||||| || |
Sbjct 9369 CTTGGGCGAACAGAGCCAACTTTTTCTGGCCGTTGATTTCCAC------TTCTTCGGTCT 9422
Query 24172 CGACCGCGAGCACGTCGCCGTATGCCTTGAACGGGCCATCGGGCACGATGCCGCGATAGT 24231
|||||| |||||||||||||| || ||||| |||| ||| |||| | || ||| |||
Sbjct 9423 TGACCGCCAGCACGTCGCCGTAGGCTTTGAATGGGCTATCCGGCAACAGGCTGCGGAAGT 9482
Query 24232 GTTCGAGGTTCACGCGTGCGCCGTATTTCGTCGGCGAGTAGTTCGCGGCAATCTGTTCGA 24291
|||| || | ||| ||||| || | ||||| | |||| ||| ||||||||
Sbjct 9483 GTTCCAGCCAGATGCGGGCGCCATAGGTAGTCGGGTTGAAGTTTTTGGCCGCCTGTTCGA 9542
Query 24292 GCCATGCGCGCTCGATCACGCGGCCGTCAGTCGTCGCGCCTTCGACGGCGATGCGGAAC 24350
|||| ||| | ||| ||| ||| | || ||||| |||||||||| ||||||
Sbjct 9543 GCCAGCTGCGTTTGATGGTGCGTTTGTCCGAGGTAGCGCCCTCGACGGCGACACGGAAC 9601
>seq3088488
Length=17142
Score = 370 bits (410), Expect = 2e-98
Identities = 1121/1724 (65%), Gaps = 97/1724 (6%)
Strand=Plus/Plus
Query 11654 AGCAGGTCGTCGCCGTTCACGACTTCGACCATGTTGATGAGGTCGATTTCGACGAGCGTT 11713
|||| ||| | ||||| || ||||| | ||||| || ||||| |||| || |
Sbjct 14917 AGCATGTCCACACCGTTGACCTTCTCGACAAAGTTGAGCAGATCGATCTCGATGATTTCT 14976
Query 11714 TCGCCGTTTACGGTGAGCTTGTAATAGCTGCACGTCGTCGAAACCTTGAACG--CCGTAT 11771
||||| | |||||| |||||||| |||||||| || || | | | || | | || |
Sbjct 14977 TCGCCATCTACGGTCAGCTTGTAGTAGCTGCAGGTGGTGGTCA--TGGAGTGTTCAGTGT 15034
Query 11772 CGTCGCCGGGCTTCGCGTTGCCGAAATCGATTTCCTTGTGACGGCCGCGCACGACGATTT 11831
| |||||||||| || | ||| | ||||| | ||||||||| ||||| || | ||
Sbjct 15035 CCTCGCCGGGCTGGGCATCGCCCATCTCGATGGTTTCGTGACGGCCACGCACAACCACTT 15094
Query 11832 CGA--TTGCGTCGTG-CTTCGTC-GAATCCTCG-GCTCGATACGCGCCGGCGAATCGCAG 11886
| | |||| || ||||| | | || || ||| | || | ||| | |||||||||
Sbjct 15095 CCACATTGC----TGACTTCGCCTGTGTCGTCTTGCTGG-TAAGGGCCAGAGAATCGCAG 15149
Query 11887 TTGCACGCCGTCATGC-TTGAGCGTGCCGTATTG-CGCGAGTACCGACTTGATAAAG-CC 11943
||| | | | || |||| || |||| | || ||| || | || ||| || ||
Sbjct 15150 GGCCACACTGG-AGGCGTTGACCGCGCCGAACTGACGC-AG-AGAGATCAGATCGAGGCC 15206
Query 11944 GCCGGCCGTCCATTCGAAAGCGATCGCCTCTT-------GCCCTTGATCGATATCGATCG 11996
|||| | |||||||||| ||| | || | |||| | | | | || ||
Sbjct 15207 ACCGGTCTTCCATTCGAACTGGATGCCGTCGTCGGACATGCCCAGGTCAGCTTT-GACCG 15265
Query 11997 GGCCATTCGTGCCGCCGCCGCGCCATGCTTCCATCTTGCGCGAGAGCTTCGGCAGCCCGA 12056
|||||||| ||||||||||||| | |||||||||||||| ||| ||||| ||
Sbjct 15266 GGCCATTCATGCCGCCGCCGCGATACGCTTCCATCTTGCGGCCGAGGGAGGGCAGGGTGA 15325
Query 12057 ----CTTCTGCAATCTGTCCGGCGAAGTTTTCGCCGTTCTGGAACAGATTGAAGTTCTTC 12112
|||| ||| | || || | | ||||| | |||||| |||| ||| ||
Sbjct 15326 GGGACTTCACCAAGC----CGAGATAGCTGTTGCCGTCATTGAACAGGTTGAGGTTTTTG 15381
Query 12113 AGTTTCTTCGGCAATGCCATG----------------------TTCA---TTTACTCCCT 12147
|| || |||| ||||||| |||| | ||||||
Sbjct 15382 AGCTTGCGAGGCATTGCCATGGCGGTGTTCTCCGGGATACGTGTTCAGGGTGAACTCCCC 15441
Query 12148 A--------------GTTATGCCG-TGACGCGCGCGGCGAAATCGGCGAGGTAACGGTCG 12192
||| || | ||| || | |||||| ||| ||||||||||||
Sbjct 15442 TCGCGGGGAGACCCGGTTTAGCTGCTGATGCCCTTGGCGAAGTCGATCAGGTAACGGTCG 15501
Query 12193 GTGATGCGTTGGCGCAGCATCAGGTTTTCGATCGGCGGAACGGGCGTGTAGTCGTAATCG 12252
||||| || ||||| | | |||| ||| | ||||| ||||| ||||||||||||||
Sbjct 15502 GTGATTCGCTGGCGGAAGGTGAGGTCTTCAAGTGGCGGCACGGGGGTGTAGTCGTAATCA 15561
Query 12253 ATCGCCAGCTTGCCGGCCTTGAGCGATTCGACGGGGTTCGCGCTGTCGTC---GTACCAA 12309
| | ||||||||||||||||| | || || ||| | ||||||| || |||
Sbjct 15562 AGCCAGAGCTTGCCGGCCTTGAGGGTGTCTTTGGTGTT---GATGTCGTCCGGGTTCCAG 15618
Query 12310 GCCGAGCCGCCGAGCAGATAGCCGTTTGCGATCAGCTCGCGGAATTTCGCGTTGATGCTT 12369
|||||||| ||| ||||| | | ||| |||||| | || ||| | | || |
Sbjct 15619 CAACTGCCGCCGATCAGGTAGCCCTGGGATTTCAACTCGCGCATCTTGGCGCTTACGCCT 15678
Query 12370 TCGATCATGTCTTTCACGATCGACGGGTGCATCGGCTTGTCGACATAAACCATGTGTGCT 12429
|||| || ||| || | || | |||||| || ||| || |||||| |||
Sbjct 15679 TCGACCAGGTCGCGTACCAGGGAGGCGTGCATAGGGCGGTCAACTGCCCACATGTGCGCT 15738
Query 12430 TCCGCCATCGTGTCGGCGAGCACTTGCGCGGTGCGCGTGTAGTTCTCGAATGCGAACAGC 12489
|| |||| ||||| ||||| | ||||||||||| |||||||| ||||| ||||||| |
Sbjct 15739 TCGCCCATGGTGTCCGCGAGGATCTGCGCGGTGCGGGTGTAGTTTTCGAAGGCGAACAAC 15798
Query 12490 GGATCATCCGAGCAGGTGCGCGAACCCCAGAAGCGATAGCCCGTCGAGTTGATGAGCGTC 12549
|| ||||| ||||||||| ||||||||||||| | || | | |||||| || ||
Sbjct 15799 GGGTCATCACTGCAGGTGCGGCTACCCCAGAAGCGAAAACCGTTGGCGTTGATCAGGGTG 15858
Query 12550 GTCACATCGTTCTCGTTGAGGTAGCCGGCATCGGTCGCGGGGTCTTGCAAGTCCCAGAAA 12609
|| || ||||| |||||||||| ||| ||||| || |||| ||||| ||||||||
Sbjct 15859 GTGACGTCGTTGCTGTTGAGGTAGTTGGCGTCGGTGGCTGGGTTTTGCAGATCCCAGAAC 15918
Query 12610 ACATCCTTGCTGATACCCGTAACGCCATTGATGCCGACATTCGAAATCGTCTTGTGCCAG 12669
|| || ||||||||| || |||||| | | | | || || || | || || |||||
Sbjct 15919 ACGTCGGCGCTGATACCGGTCACGCCACTCACGGCCACGTTGGACAGGGTTTTATGCCAA 15978
Query 12670 CCCGTTTCCTCGTCGATCTTGGCGCGCAAGCCGAGCGCGATCGCGGTCGCGTC---NNNN 12726
||||| || | ||||||||||||||| | |||||| ||| || || | || |
Sbjct 15979 CCCGTCTCTTGGTCGATCTTGGCGCGAAGGCCGAGGGCG--CG-GGCCACGGCCGAAGCG 16035
Query 12727 NNNNNNNNNNNNNNNNNNNNNNTGTCCCATCCGAGGAAATCCGGCCACATCACCATCAGC 12786
||||||| ||||| |||||||| ||||||||||
Sbjct 16036 CTGGCGGTCTTGTTGGTGACAGTGTCCCAGTTCAGGAAGTCCGGCCAAATCACCATCATT 16095
Query 12787 TCGCGTTGGCTGAATTGCTGGCGATAGGCCATCGCCGCTTCCTTG--TTCGCCGCGCCGT 12844
||||| | ||| | || ||| || |||| || |||||||| || || | ||
Sbjct 16096 TCGCGGGCACCGAAGTTCTCGCGGTACGCCACTACCTCTTCCTTGGTTTTGCAGTTCCAG 16155
Query 12845 TCGCCGACACATAGCCGAACCCGCGCAGCTTTTGTGCGAGCGTGCCGAGGGCCGCCGCGA 12904
||| || || | || ||||||| | || |||| | ||||||||| | || |
Sbjct 16156 GCGC--TTACGTATGCAAAGGCGCGCAGGTCTTTGGCGATGGCGCCGAGGGCGGTGGCTA 16213
Query 12905 CAGGCTGCGTATCGAGGCCGGGAGCGCCGAGAATGCGCGGCTTGATGCCGAGTTTCGATT 12964
| ||| | |||||||| || |||| || || ||||| | ||||| | ||||
Sbjct 16214 CTGGCAAACTGTCGAGGCCTGGCACGCCAAGGATACGCGGAGTCATGCCCACGCGTGATT 16273
Query 12965 GCGCCGAGAGTAGCGCTTGCATGCCCGTATAAGCGCCCGTCACGGCGTCGGGTTTGCCGA 13024
|| | ||| || |||| |||||| || || || || || || | ||| |
Sbjct 16274 TGGCTGCGAGCAGAGCTTTCATGCCGGTGTATTGACCGGT--TGGTGT-TGTACCGCCAA 16330
Query 13025 TCACGTTGCTCGNNNNNNNNNNNNNNNNNNNNCCTTCAGCGACGCGCACGACGACAGTGA 13084
||| | ||||| ||||| ||| || || |||| | |
Sbjct 16331 TCAGGGCGCTCGTAGTCGTCGCTTCGTCAGCGCCTTCTTTGACCCGTACCACGATAACGT 16390
Query 13085 CGGGCTTCGCCTGTGCGGCCATCGCTTGAAGCGTGCGCGCGAGCGTGCCCTTGTCGCCGG 13144
||||| | ||| |||| || |||| || || || || ||||||||| ||||||
Sbjct 16391 AAGGCTTGGTCTGGTCGGCGATGCCTTGCAGGCTGGCAGCCAGGGTGCCCTTGACGCCGG 16450
Query 13145 CCTTGCCGATCGCCGATTGAATGTTCGTCAGCAGCACGGGCGTATCGAGCGGGAACATCG 13204
||||||||| || | ||| | ||| || | || || || || || || ||||| | ||
Sbjct 16451 CCTTGCCGACGGCGGTTTGCACGTTGGTGATGAGGACTGGAGTGTCCAGAGGGAA-AACG 16509
Query 13205 AG-GCGTCAGCATCGAGGGCGGTCGCGACGAGGCCGACAACGGCCGTTGATACGGTGCGA 13263
|| | ||| ||||| ||||| || | ||||| || || || | | ||||||
Sbjct 16510 AGTGGGTCCGCATCTTCAGCGGTGCAAACCATGCCGATGACTGCGGTGGGAATAGTGCGA 16569
Query 13264 ATCGGGCGCGTGCCTTCGTTAATTTCGAGTACGCGCACGCCGTG 13307
|| ||||| ||||| ||||| | ||||| || |||||||||||
Sbjct 16570 ATGGGGCGGGTGCCGTCGTTGAGTTCGATGACCCGCACGCCGTG 16613
Score = 178 bits (196), Expect = 3e-40
Identities = 307/438 (70%), Gaps = 6/438 (1%)
Strand=Plus/Plus
Query 9922 TCCATGCCGAGC-TGAAACACCTTGCGGTATGCGTTGCCGGCCGCGCTTCCTTCCATGCC 9980
|||| ||| ||| || || | |||||| | || |||||||| | | || ||||| ||
Sbjct 12837 TCCA-GCCCAGCCTGGAAGATTTTGCGGAAAGCATTGCCGGCGGAACCACCCTCCATACC 12895
Query 9981 CGATTGATCGGCCATCACCAGCAACGGCGCCAGAGCCTTCGCCCCTTCGAGGCCTTTTTG 10040
| || || ||| | ||||| ||| ||||| |||| ||| | |||| ||| |
Sbjct 12896 GGCCTGGTCCATCATGATCAGCAGCGGTGCCAGTTCCTTGGCCGCATCGATCCCTGACTT 12955
Query 10041 CTTGATCGTATCCATCGCGGGGCCGAGCTTCGCGAACCCGTTGAGCATGTTGTTATCGTC 10100
||||| ||||| | || ||| || ||| || | ||||||||| |||
Sbjct 12956 TTTGATGACGTCCATAACTGGCGCGATTTTGCTGAAGCCTTGAAGCATGTTGCCTGGGTC 13015
Query 10101 GACGCC-GAGCATAAACGCTTTCTGGATCACGTCCGTCAGCGAGAGCATGTCTTTCTCGG 10159
||||| | | | |||| | |||||| |||| |||| | ||||||||| || |
Sbjct 13016 CACGCCTGCGTAGAAAC-CGCGCTGGATGGTGTCCATCAGACTCATCATGTCTTTTTCAG 13074
Query 10160 TCGTGCGCGTCGCGTCCTGTAGCTTCGCGGTGAATTCGGCCGCCTCGGCCGGCGTTT-TC 10218
| || || || |||||||| | ||||||| ||| ||||| || |||| ||| | ||
Sbjct 13075 TGGTCCGTGTGGCGTCCTGCATTTTCGCGGCGAACTCGGCAGCGTCGGT-GGCTTCCATC 13133
Query 10219 TTGAGCTGCACGCCGAGGTATGCCGTTGCCTCGCCCATGCCGCCGAGGATTGCTTGCGCG 10278
|| | ||||||||||||||| || | || || || ||||||||||||| ||||||
Sbjct 13134 TTCAACTGCACGCCGAGGTAGGCAGCGGCTTCACCGGTGCCGCCGAGGATGCTTTGCGCA 13193
Query 10279 CTGATACCTTGGCGCGTGAGCATCGTCATCATGTCCTGAAAATCCGCGGTCGTGCCGGGG 10338
|| || || |||||| ||||||||||||||| | ||| || || || || ||||| ||
Sbjct 13194 CTTATGCCCTGGCGCCGGAGCATCGTCATCATATTCTGGAAGTCGGCAGTTGTGCCTGGC 13253
Query 10339 AGCCGGTCGCCGAGCTTG 10356
|| ||||| || ||||||
Sbjct 13254 AGGCGGTCCCCAAGCTTG 13271
Score = 98.7 bits (108), Expect = 2e-16
Identities = 169/243 (70%), Gaps = 12/243 (5%)
Strand=Plus/Plus
Query 8918 TGAACCCGCCCAGCTCGCCGAATACGCGCGACGGGCTATGAATGCCGAGCTTTTCCTTGA 8977
|||| ||||||| ||| |||| || ||||| || || || || ||||||||||| || |
Sbjct 11272 TGAAACCGCCCAACTCAGCGAACACTCGCGATGGACTGTGTATCCCGAGCTTTTCTTTAA 11331
Query 8978 ACCATCCGACCGTGCTTGATGCGACGTTCG---TGATCGCCGCTTGAACAGCGCCGAGGC 9034
|||| |||| ||||||| | || ||| ||| || ||| || ||||||||||
Sbjct 11332 ACCAGCCGA---TGCTTGAATCACCGATCGAGCCGATAGCACCTTTCACTGCGCCGAGGC 11388
Query 9035 CGCTAGTGATGCCATTCACGAGGCC---GGCGATCATGTTCGAGCCGAATTCGGAAAACT 9091
|| || | ||| || || ||||| | |||||||| | |||||| |||| ||| |
Sbjct 11389 CGGCGGTCAAGCCGTTGACCAGGCCGTTGACGATCATGCT---GCCGAACTCGGTAAATT 11445
Query 9092 TCGACGGCATATCGATGCCGAACCATTGCAGCACGGCCGCGAAAGCCGAGTAAAACAGGC 9151
| |||| || | |||||| | | || ||| | || || ||| || ||||| |
Sbjct 11446 TGCCTGGCAGCTCCACGCCGAAGTAATTCATGACGCCGGCAAATGCCTGATAGAACAGCC 11505
Query 9152 CCA 9154
|||
Sbjct 11506 CCA 11508
>seq3053335
Length=1201
Score = 118 bits (130), Expect = 2e-22
Identities = 202/284 (71%), Gaps = 17/284 (6%)
Strand=Plus/Minus
Query 22881 ACGAGCGCATCGAGGTTCGCGTAATCGCCGGCCGCGCCGACGACGATCTTGCCGGCCGTC 22940
|| || ||||| ||||| |||||||||||| | ||||||| || |||||| ||
Sbjct 483 ACCAGGGCATCAAGGTTGGCGTAATCGCCGCCGGCGCCGAGCGTGACCTTGCCAGC---G 427
Query 22941 TTCGCGCCTTCGTCCATCACGCGTTGCGGGGCTTGGTCGCGCATGCGTTGCAACCAGCCC 23000
|| ||||| || | || ||| | |||||||| || ||||||| | |||| |||||||
Sbjct 426 TTGGCGCCCTCTTTCAGCACCTGCTGCGGGGCCTGTTCGCGCAATTGCTGCAGCCAGCCC 367
Query 23001 TTATTGACGTCCTGCAAC-AGCGGGTTAGCTGCA---CGGTCGGACGTTGCCGCACGCGA 23056
|| || |||||||||| | | | | || || ||||| | ||| |||||| |
Sbjct 366 TTGTTCACGTCCTGCAGCTTGGGAAATTTCTCCAAGTCGGTCTG-CGTGGCCGCATG--- 311
Query 23057 ACGGCCGTTGAAACCGATCGCGATGCGGTCGAGCGCTTGACGGCGCACGATCACGTCG-- 23114
| ||||| ||||||||| |||| ||||| |||| || |||| |||| ||
Sbjct 310 AGTGCCGTGGAAACCGATAACGATTCGGTCCTGCGC--GA-TGCGCTTTTGCACGGCGGC 254
Query 23115 CGAAT-GCGGGTCTGGAAGTCGGGAAACTTCGCCCACGCGTCGA 23157
|||| ||| | ||||||||||||||||||||| || ||||
Sbjct 253 GGAATAGCGATCTTTGAAGTCGGGAAACTTCGCCCAGGCATCGA 210
>seq3063309
Length=1409
Score = 84.2 bits (92), Expect = 4e-12
Identities = 274/419 (65%), Gaps = 10/419 (2%)
Strand=Plus/Plus
Query 25224 CGCAACATTCTCAAGTCGCGGCAGATCGGCGCGACGTTCTATTTCGCACGCGAGGCGCTA 25283
|||||||| || || || ||| | ||| ||||| ||| ||||| |||| ||| |
Sbjct 3 CGCAACATCCTGAAAAGCCGCCAGGTGGGCCTGACGTACTACTTCGCCGGCGAAGCGTTC 62
Query 25284 GACGATGCCTTGCAGACTGCACGCAATCAGATTTTTCTATCGGCCAGCAAGGCGCAGGCG 25343
|| ||| ||| ||| | ||| ||| | || || ||||||||| ||||| ||
Sbjct 63 ATGGACGCCGTGCTGACCGGCGACAACCAGGTGTTCCTGTCGGCCAGCCGCTCGCAGTCG 122
Query 25344 CACGTTTTCA--AGTCGTACATTCGGCAGTTTGCC--GCCGAGGCCGCCGAGGTCGAATT 25399
| ||||| ||| ||||| |||||||| || | || ||| |||| |
Sbjct 123 GAAATTTTCCGCAGT--TACATCATCCAGTTTGCAAAGCAGTGGTT--CGACATCGAGCT 178
Query 25400 GACCGGCGACCCGATCATTTTGCCGAACATGGCAGAGTTGATTTTCCTCGGCACGAATTC 25459
||||||| ||||||||| | ||| || ||| || |||| | || |||
Sbjct 179 GACCGGCAACCCGATCACGCTCAGCAACGGCGCCGAGCTGCGTTTCTTGTCGACCAATAG 238
Query 25460 GCGAACGGCGCAGAGCTATCACGGCAATTTCTATTTCGACGAGTATTTTTGGGTGAGCGG 25519
| || || ||| |||| || ||| | |||| |||| |||||||||||| | | |
Sbjct 239 CAGCACCGCCCAGGGCTACCATGGCCACGTCTACGTCGATGAGTATTTTTGGATACGTGA 298
Query 25520 GTTTCGCCAGCTCAACAAGGTTGCATCGGGCATGGCGATGCACAAGAAATGGCGAAAGAC 25579
|| | | |||| || || || | ||||| | |||||||| ||||| || ||
Sbjct 299 CTTCGACAAACTCAGCACCGTGGCCAGTGCCATGGGCACCCACAAGAAGTGGCGCAAAAC 358
Query 25580 GTATTTTTCAACGCCGTCGAGCA-TCACGCACGAGGCTTACACCTTCTGGAGTGGCGAG 25637
|| ||||| ||||| | ||| || ||||| | || ||| | |||||| ||||||
Sbjct 359 CTACTTTTCGACGCC-CAGCGCAGTCTCGCACCAAGCGTACCCGTTCTGGTCGGGCGAG 416
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 99504426230378
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |