Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09] 3,088,511 sequences; 2,785,377,831 total letters Query= NC_015273.1 Length=32317 Score E Sequences producing significant alignments: (Bits) Value seq3088503 446 3e-121 seq3088488 370 2e-98 seq3053335 118 2e-22 seq3063309 84.2 4e-12 >seq3088503 Length=21467 Score = 446 bits (494), Expect = 3e-121 Identities = 939/1396 (67%), Gaps = 14/1396 (1%) Strand=Plus/Plus Query 25122 AACGATTTCAGCGACGAGCAGATCGCACGGCTTCACGAGGCCTTTCTTGATTGCCAGTTC 25181 |||||| ||||||| |||||||||| | | | | || || ||| | || || ||| Sbjct 10152 AACGATATCAGCGAAGAGCAGATCGAGCTGTTGCGTGAAGCGTTTATCGACGGCTGTTTC 10211 Query 25182 GGTTATCAAAAGGTGTGGTATCGAAACGGCCATCAGCGCACGCGCAACATTCTCAAGTCG 25241 | || || || | ||||| || ||| |||| || || ||| ||| ||||| Sbjct 10212 GACTACCAGAAAGACTGGTACCGGGCTGGCAATCAACGGACTCGCGTCATCCTCAAAAGC 10271 Query 25242 CGGCAGATCGGCGCGACGTTCTATTTCGCACGCGAGGCGCTAGACGATGCCTTGCAGACT 25301 ||||||||||||||||| | || || || ||||||||| | ||||| || | || Sbjct 10272 CGGCAGATCGGCGCGACCTATTACTTTGCCCGCGAGGCGTTTCTTGATGCGCTGGAAACC 10331 Query 25302 GCACGCAATCAGATTTTTCTATCGGCCAGCAAGGCGCAGGCGCACGT-TTTCAAGTCGTA 25360 | ||||||||||| || || || || || || || | | |||| | ||| Sbjct 10332 GGGCGCAATCAGATCTTCCTGTCCGCATCGAAAAACCAAGCCTATCTGTTTCGCGG-GTA 10390 Query 25361 CATTC-GGCAGTTTGCCGCCGAGGCCGCCGAGGTCGAATTGACCGGCGACCCGATCATTT 25419 ||| | |||| |||||| |||| || ||||| |||| || || || ||| | | Sbjct 10391 CATCCAGGCA-TTTGCCCGTGAGGTTATCGGTGTCGAGCTGACGGGGGATCCCATCGTAT 10449 Query 25420 TGCCGAACATGGCAGAGTTGATTTTCCTCGGCACGAATTCGCGAACGGCGCAGAGCTATC 25479 |||| ||| || ||| || |||||||||| || ||| |||| || || ||| |||| | Sbjct 10450 TGCCCAACGGCGCCGAGCTGTTTTTCCTCGGTACCAATGCGCGTACCGCCCAGGGCTACC 10509 Query 25480 ACGGCAATTTCTATTTCGACGAGTATTTTTGGGTGAGCGGGTTTCGCCAGCTCAACAAGG 25539 ||||||||||||| |||||||| | || ||| | | |||| | || ||||||| Sbjct 10510 ACGGCAATTTCTACTTCGACGAATTCTTCTGGACGTTCAAGTTTGAGGAACTGAACAAGG 10569 Query 25540 TTGCATCGGGCATGGCGATGCACAAGAAATGGCGAAAGACGTATTTTTCAACGCCGTCGA 25599 | || ||||||||||| ||||||||||| ||||| || || || || || |||||||| | Sbjct 10570 TCGCTTCGGGCATGGCCATGCACAAGAAGTGGCGCAAAACCTACTTCTCGACGCCGTCCA 10629 Query 25600 GCATCACGCACGAGGCTTACACCTTCTGGAGTGGCGAGCACTACAACAGGGGCCGCGCAA 25659 |||| | || ||||| ||||||||||||| ||||||| || ||||| ||| || Sbjct 10630 GCATGGCCCATGAGGCCTACACCTTCTGGACCGGCGAGCGCTTCAACAAGGGTAAGCCAG 10689 Query 25660 AGGCCGATCACATTCATCTCGATATTTCGCACTCGGCGCTCGCTCGCGGCCGGCTCTGCG 25719 ||| | |||| | |||| |||| ||| ||||||| | || ||| |||||| Sbjct 10690 CGGCGCAACACACCAAGGTCGACGTTTCCCACGGGGCGCTCCAACAGGGGCGGTTCTGCG 10749 Query 25720 AGGATCGACAGTTTCGCCAGATCGTGACGGTCGAGGATGCCGTCGCCGGCGGTTGCGACT 25779 |||| || || || |||||||| || || ||| || | |||||| || || Sbjct 10750 AGGACCGGTTGTGGCGGCAGATCGTCACCATCCTGGACGCAGAGCACGGCGGCTGTGATC 10809 Query 25780 TGTTCGATATCGACGAGCTGCGCCTTGAATACAGCGCGCAGGAATACGCGAATCTGTTGA 25839 ||||||| || || ||| |||| | || |||||| | ||| | ||| || ||||||| Sbjct 10810 TGTTCGACATTGAGGAGTTGCGTCGGGAGTACAGCCCTGAGGCGTTCGCCAACCTGTTGA 10869 Query 25840 TGTGTCAGTTTATCGACGATACCGCGTCGATCTTTCCGCTCGCCGAGCTGCAACGCTGCA 25899 ||||| ||||| | |||||| || ||||||||| | || |||||| |||||| Sbjct 10870 TGTGTGAGTTTGTTGACGATGGAGCCAGCATCTTTCCGTTGGCGTTGCTGCAGAGCTGCA 10929 Query 25900 TGGTCGACTCGTGGGAAGAATGGGCCGACGATTTCAAGCCGCTCGCGCCCCGCCCTTTCG 25959 |||||||| |||| |||||||| || || | |||||| |||| || || |||| Sbjct 10930 TGGTCGACAGTTGGGTTGAATGGGCAGAGGACTACAAGCCATTCGCCATGCGGCCGTTCG 10989 Query 25960 GGTTCCGGCCGGTATGGGTTGGCTACGATCCAGCGCTTTCCGGCGACTCGGCCGGCCTTG 26019 | ||| | ||||||| | |||||||| |||||| |||| || | |||| || | Sbjct 10990 GTGACCGTCAGGTATGGATCGGCTACGACCCAGCGGAAACCGGTGATTGCTCCGGGCTGG 11049 Query 26020 TCNNNNNNNNNNNNNNNNNNNTGCCGGGGGGCAAGTTCCGCGTATTGCACAAGTGCCAAT 26079 | | ||||| ||||| |||||||| || | | ||||| Sbjct 11050 TGGTGGTTGCGCCGCCGCTGGTACCGGGCGGCAAATTCCGCGTCCTGGAGCGGCACCAAT 11109 Query 26080 TTCGCGGCATGGATTTCGAGGGGCAAGCCGAGGCGATTCGACAGATCACTCAGCAA---- 26135 | || |||||||| || | || || || ||| ||| || | || || | Sbjct 11110 TCCGGGGCATGGACTTTGCGGCCCAGGC---GGC-ATTTATCAAAAACGTCTGCGACCGC 11165 Query 26136 TACAACGTCGAATATATGTCGATCGATACGACGGGCATCGGCCAGGGTGTTTATCAGCTC 26195 ||| || ||||| ||| ||| || || | || || || ||||| Sbjct 11166 TACTGGGTGACCTATATCGGGATTGATGTCACCGGGCTGGGTAGCGGCGTGGCGCAGCTG 11225 Query 26196 GTCAAACAGTTCTATCCGAGCGCGGTCGCGCTCAACTATTCGCCCGAAATCAAGGGGCGT 26255 || ||||||| ||| | | | | ||| ||||||||||||| |||| || Sbjct 11226 GTGCGCCAGTTCTTCCCGGCTGTGACCACCTTCAGCTATTCGCCCGAAGTCAAAACACGC 11285 Query 26256 CTCGTGCTTAAGGGCT-TGTCGGTGATCGGCAAGGGCCGGCTCGAATTCGATGCCGGTTG 26314 || ||||| |||| || || | |||||| || |||||||| || ||||| ||||| || Sbjct 11286 CTGGTGCTGAAGGCCTATGAC-GTGATCCATAACGGCCGGCTGGAGTTCGACGCCGGGTG 11344 Query 26315 GACAGACCTAGCGCAATCCTTCATGGCCATTCGGAAAACCATGACGGCGAGCGGCCGAAA 26374 ||| ||| | ||||| || | ||||| || || || || | || || |||| || | Sbjct 11345 GACCGACATGGCGCAGTCGATGATGGCGATCCGCAAGACGGTCACCGCAGGCGGTCGCCA 11404 Query 26375 GGTGACATACGAGGCGAGCCGCAGCGAGGAAACCGGCCACGCCGATCTAGCGTGGGCGTG 26434 | || ||| || | |||| ||| | |||||||| ||||| || || |||||| Sbjct 11405 GTACACCTACACCGCAGGGCGCAACGACAACACCGGCCATGCCGACCTGGCCTGGGCGCT 11464 Query 26435 CCTGCACGCGCTCGATAACGAGCCGCTAGAGGGCACGACCGCAAACAATACCGGCTTTAT 26494 | ||||| | | ||||| ||||| ||||| |||||| ||||||||| || Sbjct 11465 ATTTCACGCATTGCAAAACGAACCGCTTGAGGGGCAGACCGCCTCCAATACCGGGCGAAT 11524 Query 26495 GGAGTTCTCTTAATGA 26510 |||| | | || |||| Sbjct 11525 GGAGATTTTTTGATGA 11540 Score = 306 bits (338), Expect = 7e-79 Identities = 900/1364 (66%), Gaps = 41/1364 (3%) Strand=Plus/Plus Query 22149 GCGATATCGAGCGCGCCGGCGAAGTCGCCCACGTCGACGCGCCAGATCATTACGGTCGTG 22208 ||||||||||| |||| | |||||||| | |||| |||||| | |||||| || || Sbjct 7415 GCGATATCGAGGCCGCCCGTAAAGTCGCCAGCATCGAAGCGCCAAACCATTACCGTGGTC 7474 Query 22209 AGCACATCGTCTTGAGCGCCCCGCCCGCCACTCAGCGCGCCGGCGACATATTCGACGTAT 22268 | || |||||||| |||||| | ||| | |||| | || |||||| || ||| Sbjct 7475 ATTACCTCGTCTTGTGCGCCCTGACCGGCCTCCAGCACTCCCTGGACATAAGGGATGTAG 7534 Query 22269 TCGGGCAGCAGCTCGGCGCGCTTCACTTCGATTTTTCGCGCGATCGACTTGATTTCCTTG 22328 |||||||||| | | ||||| | |||| ||| | | | | |||| | | || Sbjct 7535 TCGGGCAGCAATTGG---CGCTTGAGTTCGGCTTTGCCCTGGTTTGACTGCACCTGTTTC 7591 Query 22329 AGTCGTCGCCGATCGA-TCGCGAGTTTCGCAAGCATCAGCTCGTAAGCGCTT---CCGAC 22384 || || | ||||| | || |||| ||| |||||||||| | ||| | Sbjct 7592 AGGCGCAGGCGATCCTGTAGC-AGTTGGTTGAGCTGGTGCTCGTAAGCCGTGGCGCCGGC 7650 Query 22385 CATTGTTTCGCCCG---CGCCGGCCGAGGCCGACGCGAGGCTTGCCGATACGCGCTGAAA 22441 ||| |||| || | |||||| ||| | | ||| || | | || ||||| Sbjct 7651 CATGGTTTGAGTCGGTTCAACGGCCG---CCGCCTCCAGGGCGGCAGTGATACGTTGAAA 7707 Query 22442 ATGGCGTCGTGCGGGGCTAGTCATCGCGTCATGCCTCCGTTACGCCGCCGGCGCGATTTC 22501 || || || || | ||||| | || | | || ||| ||| | ||| Sbjct 7708 GTGACGACGGCAAGGATTGGTCATGG--TCG-GTCGCC-TTATGCC---------AGTTC 7754 Query 22502 GATGTTCTCGGCAACAGCAGCGCGGCCGAGGTCTTCGACGACATACGCATCGTTCGACGA 22561 |||||| || || | | || | | |||||||| | ||| || || || || ||| Sbjct 7755 GATGTTTTCAGCGAGCGAGGCACATTCCAGGTCTTCAATGACGTATGCGTCATTGACCGA 7814 Query 22562 TTCATAGTTCTCGATACGGTCGCGCTTCGCGTTGTCGACGATCGTGCGACGCCGTGCGCT 22621 || ||||| ||||| ||||| ||||| || |||||||||| ||||| || || || Sbjct 7815 CTCGTAGTTTTCGATGCGGTCACGCTTGGCATTGTCGACGACGGTGCGGCGGCGGCTGCC 7874 Query 22622 GTCTTGAAAGTACAGAGACAGATTGTCGAAACTCGTCACCATCACGGCATTGGCCGGGAA 22681 || || |||| | ||||| || || | | || |||| || | | |||||| Sbjct 7875 TTCCTGCCAGTAGATCGACAGGTTTTCCAGCTTGGTGACCAGCAACCCGCGCGGCGGGAA 7934 Query 22682 GAAAGGCACGGTCACGGCCGGCAGGTTGCCGATGCGCTTCTGGCTCTGGATCACGTCAGC 22741 | |||||||| |||||| |||| ||||| | |||||| || || || | || || Sbjct 7935 GTAAGGCACGCGCACGGCTGGCAAATTGCCCAAGCGCTTTTGACTGGTGACGATATCGGC 7994 Query 22742 GGCCATCATTTCGGTCGGCGCTTGGGCCTTGTTGACGAGCGGGAAATACTTGTCGTGCAA 22801 ||||| |||||| |||||||| | | | ||||||| || |||||||||||||||| || Sbjct 7995 GGCCAGCATTTCAGTCGGCGCGTTGTCTTTGTTGATGATCGGGAAATACTTGTCGGCCAG 8054 Query 22802 CAGGCCGCGACCGCACATCACGACGAGAGCCGTGTCGTCTTGGTGCCACGGGTCGATCAT 22861 ||| ||||||||| ||||| || ||| | | ||| || |||| |||||| | || | Sbjct 8055 CAGTTGGCGACCGCAGATCACCACCAGATCAGGGTCTTCCTGGTACCACGGCGCAATGA- 8113 Query 22862 GCTC-GCGACCAGATCGGCGACGAGCGCATCGAGGTTCGCGTAATCGCCGGCCGCGCCGA 22920 ||| | |||| | || || || |||||||| | | | || | || |||| Sbjct 8114 ACTCTTCCACCATGCTGAATACCAGGGCGTCGAGGTTGGTGAAGTCTTTACCGGCACCGA 8173 Query 22921 CGACGATCTTGCCGGCCGTCTTCG-CGCCTTCGTCCATCACGCGTTGCGG-GGCTTGGTC 22978 | ||| ||||||| | ||||| | |||| | ||| ||||| |||| | || | | Sbjct 8174 TGGTGATTTTGCCGG-AGCCTTCGACCACTTCCTTCATGACGCG-GGCGGCGTTTTCGGC 8231 Query 22979 GCGCATGCGTTGCAACCAGCCCTTATTGACGTCCTGCAACAGCGGGTTAGCTGCACGGTC 23038 |||||| |||| ||| || | ||||||||||| || || || | || ||| Sbjct 8232 GCGCATCTTCTGCAGCCAACCAATGTTGACGTCCTGGCGAAGTGGATTGGTGGCTGGGTT 8291 Query 23039 GGACGTTGCCGCACG-CGAACGGCCGTTGAAACCGATCGCGATGCGGTCGAGCGCTTGAC 23097 |||||| || || || | || |||||| |||||||| ||||||||| ||||| || | Sbjct 8292 GGACGTCGCGGCGCGACTGAC-GCCGTTCCAACCGATCAGGATGCGGTCCAGCGCCTGGC 8350 Query 23098 GGCGCACGATCACGTCGCGAATGCGGGTCTGGAAGTCGGGAAACTTCGCCCACGCGTCGA 23157 | || ||| |||| ||||| |||| |||||||||||| ||||| |||||||| || | Sbjct 8351 GTTTCAGGATGGCGTCACGAATACGGGCCTGGAAGTCGGGGAACTTGGCCCACGCATCCA 8410 Query 23158 GC-AGCGCATACGTGATGTGCGAGTCGAAATTCGTTTGCGTGCAGTTGTAACCGTTCTCG 23216 | || ||| || ||| | ||||| || || |||| |||| ||| || || Sbjct 8411 ACTTGCTGTAACG-GAGGTGGGTATCGAAGTTGGTCTGCGAGCAGAAGTAGCCACGGTCA 8469 Query 23217 TCGAGGTCGGTCACATCAGCCGTTGCGCGATCCTTCTGCGTCGTGTCGGTCGTGCTCGCG 23276 ||||| | | | || ||| |||| || || | || || || |||| ||| Sbjct 8470 TCGAGTGTGCTGATGTCGCTGGTTTCGCGCTCTTTGGTATTTGTATCAGTGGTGCCGGCG 8529 Query 23277 ATCGGCGAGCCGACGCCGAGGCCGAGCTTTGCGCCTTCCTTGTCGGTCACGCCGATAACG 23336 ||||| ||||| ||| | ||| | || |||| || |||| |||||| | | Sbjct 8530 TTCGGCCCGCCGATGCCCATGCCAATTTTCTCGCCCATCTGCTCGGCGACGCCGTAGATG 8589 Query 23337 TTGATGCGTTTCAGAAAGTCGCTCGATTCCTGAATGCGGGTTTCGAGCTTTTGTTGCACG 23396 |||||| ||| || | || || ||||| || ||| |||| || |||| ||| Sbjct 8590 TTGATGGCGCTCAAGAACTGACTGGACTCCTGCATCCGGTTTTCCAGGGTTTGGGTGACG 8649 Query 23397 CTCGGCGACACGGCGAATTTCTTCGTCGCGTTCGGGATGCCGTTGAGCTTGGC--GATCG 23454 || || | ||| ||||| | || ||| || | || || ||||||||| | | | Sbjct 8650 CTGGGGGCGGTGGCAAATTTGGTGGTGACGTCGGGCACGCTGTGGAGCTTGGCCAGTTGG 8709 Query 23455 CTTCGAGGAATTGATCGAAAGCGAACCGGGTTTCGTTGCGCATG 23498 | | ||| | | ||| || ||||| |||||||||||| Sbjct 8710 C--CCAGGTAGGCGTTGAAGACGGTACGGGTATCGTTGCGCATG 8751 Score = 187 bits (206), Expect = 5e-43 Identities = 265/370 (72%), Gaps = 2/370 (1%) Strand=Plus/Plus Query 27026 CAAGAGGTGTACGGCTTGCCCGAATATCTCGGCGCGCTGCACTCGGCATGGTTGAACGAG 27085 || ||| | || |||||||| || | | | || |||| ||||| | | | ||||| Sbjct 12035 CAGGAGATTTATGGCTTGCCGGAGTGGATTAGTGCCTTGCAGTCGGCGTTGCTCAACGAA 12094 Query 27086 TCGGCGACGCTCTTTCGTCGCAAGTATTACGAGAATGGATCGCACGCCGGTTTCATCCTG 27145 ||||| ||| | || || |||||||| ||||||||||| |||||||| ||||| || Sbjct 12095 TCGGCCACGTTGTTCCGCCGCAAGTACTACGAGAATGGCAGTCACGCCGGCTTCATTCTC 12154 Query 27146 TACATGACCGATGCGGCGCAAAGTCAAAGCGATGTCGACAAGATGCGCGAGGCGTTGAAG 27205 |||||||||||||| || || | | ||| |||| ||||| ||||| |||| | ||| Sbjct 12155 TACATGACCGATGCCGCACAGACTGAAACCGATATCGACGCTTTGCGCAAGGCTCTCAAG 12214 Query 27206 AACAGCAAGGGGCCGGGGAATTTCCGAAACCTTTTCATGTACGCGCCGAACGGCAAGAAA 27265 || ||||||||| || ||||| || ||| | || |||| |||| | ||||||||| Sbjct 12215 GACTCCAAGGGGCCAGGCAATTTTCGCAACTTGTTTGTGTATTCGCCCACCGGCAAGAAG 12274 Query 27266 GACGGCATCCAGCTCATTCCGGTTTCCGAGGTCACGGCGAAAGACGAGTTCTTCAACATC 27325 ||||| || ||||| || ||||| ||||| |||| || || || ||| | ||| Sbjct 12275 GACGGGATACAGCTGATCCCGGTCAGTGAGGTGGCGGCCAAGGATGAATTCAACTCGATC 12334 Query 27326 AAGAATGTCACGCGCGACGACTTGCTCGCGGCGCAT-CGCATCCCGCCTCAGCTCATGGG 27384 || || || || ||||| |||| || || | || || || || ||||| ||||| Sbjct 12335 AAAAACCAAACCCGTGACGATGTGCTAGC-CAGCTTGCGTATTCCACCGCAGCTGATGGG 12393 Query 27385 GATCGTGCCG 27394 || |||||| Sbjct 12394 CATTGTGCCG 12403 Score = 149 bits (164), Expect = 1e-31 Identities = 286/419 (68%), Gaps = 17/419 (4%) Strand=Plus/Plus Query 23941 TCGGGTTCT-GAGCTGCGAAAGAAAGGATTTCGGTGCCGAGGCTCGCGGGGCTATCGGTC 23999 ||||||| | | || | ||| | || | || || || | ||| || ||| ||||| Sbjct 9191 TCGGGTTTTTGCGCGGAGAAGGCGAGTAGGTCAGTACCCAAGCTGGCAGGGGAGTCGGTG 9250 Query 24000 ACGGCGAGGCCGATGAGATACGCCTGTTTCGTGTCGGCGAA--TGACGGGTCGATTTCGC 24057 || || || |||| || || || | ||||||||||| || || ||||||||| Sbjct 9251 ACTGCCAGACCGACGATGTAGGCTTCCCCTGTGTCGGCGAAGCTGTCG--TCGATTTCGA 9308 Query 24058 ACGAGGTGTAAATCTTTTGCTTCGCCTTCGTCATCGCGACCAGCTCGGCAGTCGGCTCGA 24117 |||||||| | ||| ||| | ||||| |||| |||| ||| |||| ||||| |||| Sbjct 9309 TGGAGGTGTAGACCTTCTGCCTGGCCTTGTTCATGGCGATCAGTTCGGGCGTCGGTTCGA 9368 Query 24118 TTTGCGCGAACAGTCCGAGCTT------GCCGGCGAATTCGCCCGTGAGTTCTTGCGTTT 24171 ||| |||||||| | | ||| |||| || ||| | ||||| || | Sbjct 9369 CTTGGGCGAACAGAGCCAACTTTTTCTGGCCGTTGATTTCCAC------TTCTTCGGTCT 9422 Query 24172 CGACCGCGAGCACGTCGCCGTATGCCTTGAACGGGCCATCGGGCACGATGCCGCGATAGT 24231 |||||| |||||||||||||| || ||||| |||| ||| |||| | || ||| ||| Sbjct 9423 TGACCGCCAGCACGTCGCCGTAGGCTTTGAATGGGCTATCCGGCAACAGGCTGCGGAAGT 9482 Query 24232 GTTCGAGGTTCACGCGTGCGCCGTATTTCGTCGGCGAGTAGTTCGCGGCAATCTGTTCGA 24291 |||| || | ||| ||||| || | ||||| | |||| ||| |||||||| Sbjct 9483 GTTCCAGCCAGATGCGGGCGCCATAGGTAGTCGGGTTGAAGTTTTTGGCCGCCTGTTCGA 9542 Query 24292 GCCATGCGCGCTCGATCACGCGGCCGTCAGTCGTCGCGCCTTCGACGGCGATGCGGAAC 24350 |||| ||| | ||| ||| ||| | || ||||| |||||||||| |||||| Sbjct 9543 GCCAGCTGCGTTTGATGGTGCGTTTGTCCGAGGTAGCGCCCTCGACGGCGACACGGAAC 9601 >seq3088488 Length=17142 Score = 370 bits (410), Expect = 2e-98 Identities = 1121/1724 (65%), Gaps = 97/1724 (6%) Strand=Plus/Plus Query 11654 AGCAGGTCGTCGCCGTTCACGACTTCGACCATGTTGATGAGGTCGATTTCGACGAGCGTT 11713 |||| ||| | ||||| || ||||| | ||||| || ||||| |||| || | Sbjct 14917 AGCATGTCCACACCGTTGACCTTCTCGACAAAGTTGAGCAGATCGATCTCGATGATTTCT 14976 Query 11714 TCGCCGTTTACGGTGAGCTTGTAATAGCTGCACGTCGTCGAAACCTTGAACG--CCGTAT 11771 ||||| | |||||| |||||||| |||||||| || || | | | || | | || | Sbjct 14977 TCGCCATCTACGGTCAGCTTGTAGTAGCTGCAGGTGGTGGTCA--TGGAGTGTTCAGTGT 15034 Query 11772 CGTCGCCGGGCTTCGCGTTGCCGAAATCGATTTCCTTGTGACGGCCGCGCACGACGATTT 11831 | |||||||||| || | ||| | ||||| | ||||||||| ||||| || | || Sbjct 15035 CCTCGCCGGGCTGGGCATCGCCCATCTCGATGGTTTCGTGACGGCCACGCACAACCACTT 15094 Query 11832 CGA--TTGCGTCGTG-CTTCGTC-GAATCCTCG-GCTCGATACGCGCCGGCGAATCGCAG 11886 | | |||| || ||||| | | || || ||| | || | ||| | ||||||||| Sbjct 15095 CCACATTGC----TGACTTCGCCTGTGTCGTCTTGCTGG-TAAGGGCCAGAGAATCGCAG 15149 Query 11887 TTGCACGCCGTCATGC-TTGAGCGTGCCGTATTG-CGCGAGTACCGACTTGATAAAG-CC 11943 ||| | | | || |||| || |||| | || ||| || | || ||| || || Sbjct 15150 GGCCACACTGG-AGGCGTTGACCGCGCCGAACTGACGC-AG-AGAGATCAGATCGAGGCC 15206 Query 11944 GCCGGCCGTCCATTCGAAAGCGATCGCCTCTT-------GCCCTTGATCGATATCGATCG 11996 |||| | |||||||||| ||| | || | |||| | | | | || || Sbjct 15207 ACCGGTCTTCCATTCGAACTGGATGCCGTCGTCGGACATGCCCAGGTCAGCTTT-GACCG 15265 Query 11997 GGCCATTCGTGCCGCCGCCGCGCCATGCTTCCATCTTGCGCGAGAGCTTCGGCAGCCCGA 12056 |||||||| ||||||||||||| | |||||||||||||| ||| ||||| || Sbjct 15266 GGCCATTCATGCCGCCGCCGCGATACGCTTCCATCTTGCGGCCGAGGGAGGGCAGGGTGA 15325 Query 12057 ----CTTCTGCAATCTGTCCGGCGAAGTTTTCGCCGTTCTGGAACAGATTGAAGTTCTTC 12112 |||| ||| | || || | | ||||| | |||||| |||| ||| || Sbjct 15326 GGGACTTCACCAAGC----CGAGATAGCTGTTGCCGTCATTGAACAGGTTGAGGTTTTTG 15381 Query 12113 AGTTTCTTCGGCAATGCCATG----------------------TTCA---TTTACTCCCT 12147 || || |||| ||||||| |||| | |||||| Sbjct 15382 AGCTTGCGAGGCATTGCCATGGCGGTGTTCTCCGGGATACGTGTTCAGGGTGAACTCCCC 15441 Query 12148 A--------------GTTATGCCG-TGACGCGCGCGGCGAAATCGGCGAGGTAACGGTCG 12192 ||| || | ||| || | |||||| ||| |||||||||||| Sbjct 15442 TCGCGGGGAGACCCGGTTTAGCTGCTGATGCCCTTGGCGAAGTCGATCAGGTAACGGTCG 15501 Query 12193 GTGATGCGTTGGCGCAGCATCAGGTTTTCGATCGGCGGAACGGGCGTGTAGTCGTAATCG 12252 ||||| || ||||| | | |||| ||| | ||||| ||||| |||||||||||||| Sbjct 15502 GTGATTCGCTGGCGGAAGGTGAGGTCTTCAAGTGGCGGCACGGGGGTGTAGTCGTAATCA 15561 Query 12253 ATCGCCAGCTTGCCGGCCTTGAGCGATTCGACGGGGTTCGCGCTGTCGTC---GTACCAA 12309 | | ||||||||||||||||| | || || ||| | ||||||| || ||| Sbjct 15562 AGCCAGAGCTTGCCGGCCTTGAGGGTGTCTTTGGTGTT---GATGTCGTCCGGGTTCCAG 15618 Query 12310 GCCGAGCCGCCGAGCAGATAGCCGTTTGCGATCAGCTCGCGGAATTTCGCGTTGATGCTT 12369 |||||||| ||| ||||| | | ||| |||||| | || ||| | | || | Sbjct 15619 CAACTGCCGCCGATCAGGTAGCCCTGGGATTTCAACTCGCGCATCTTGGCGCTTACGCCT 15678 Query 12370 TCGATCATGTCTTTCACGATCGACGGGTGCATCGGCTTGTCGACATAAACCATGTGTGCT 12429 |||| || ||| || | || | |||||| || ||| || |||||| ||| Sbjct 15679 TCGACCAGGTCGCGTACCAGGGAGGCGTGCATAGGGCGGTCAACTGCCCACATGTGCGCT 15738 Query 12430 TCCGCCATCGTGTCGGCGAGCACTTGCGCGGTGCGCGTGTAGTTCTCGAATGCGAACAGC 12489 || |||| ||||| ||||| | ||||||||||| |||||||| ||||| ||||||| | Sbjct 15739 TCGCCCATGGTGTCCGCGAGGATCTGCGCGGTGCGGGTGTAGTTTTCGAAGGCGAACAAC 15798 Query 12490 GGATCATCCGAGCAGGTGCGCGAACCCCAGAAGCGATAGCCCGTCGAGTTGATGAGCGTC 12549 || ||||| ||||||||| ||||||||||||| | || | | |||||| || || Sbjct 15799 GGGTCATCACTGCAGGTGCGGCTACCCCAGAAGCGAAAACCGTTGGCGTTGATCAGGGTG 15858 Query 12550 GTCACATCGTTCTCGTTGAGGTAGCCGGCATCGGTCGCGGGGTCTTGCAAGTCCCAGAAA 12609 || || ||||| |||||||||| ||| ||||| || |||| ||||| |||||||| Sbjct 15859 GTGACGTCGTTGCTGTTGAGGTAGTTGGCGTCGGTGGCTGGGTTTTGCAGATCCCAGAAC 15918 Query 12610 ACATCCTTGCTGATACCCGTAACGCCATTGATGCCGACATTCGAAATCGTCTTGTGCCAG 12669 || || ||||||||| || |||||| | | | | || || || | || || ||||| Sbjct 15919 ACGTCGGCGCTGATACCGGTCACGCCACTCACGGCCACGTTGGACAGGGTTTTATGCCAA 15978 Query 12670 CCCGTTTCCTCGTCGATCTTGGCGCGCAAGCCGAGCGCGATCGCGGTCGCGTC---NNNN 12726 ||||| || | ||||||||||||||| | |||||| ||| || || | || | Sbjct 15979 CCCGTCTCTTGGTCGATCTTGGCGCGAAGGCCGAGGGCG--CG-GGCCACGGCCGAAGCG 16035 Query 12727 NNNNNNNNNNNNNNNNNNNNNNTGTCCCATCCGAGGAAATCCGGCCACATCACCATCAGC 12786 ||||||| ||||| |||||||| |||||||||| Sbjct 16036 CTGGCGGTCTTGTTGGTGACAGTGTCCCAGTTCAGGAAGTCCGGCCAAATCACCATCATT 16095 Query 12787 TCGCGTTGGCTGAATTGCTGGCGATAGGCCATCGCCGCTTCCTTG--TTCGCCGCGCCGT 12844 ||||| | ||| | || ||| || |||| || |||||||| || || | || Sbjct 16096 TCGCGGGCACCGAAGTTCTCGCGGTACGCCACTACCTCTTCCTTGGTTTTGCAGTTCCAG 16155 Query 12845 TCGCCGACACATAGCCGAACCCGCGCAGCTTTTGTGCGAGCGTGCCGAGGGCCGCCGCGA 12904 ||| || || | || ||||||| | || |||| | ||||||||| | || | Sbjct 16156 GCGC--TTACGTATGCAAAGGCGCGCAGGTCTTTGGCGATGGCGCCGAGGGCGGTGGCTA 16213 Query 12905 CAGGCTGCGTATCGAGGCCGGGAGCGCCGAGAATGCGCGGCTTGATGCCGAGTTTCGATT 12964 | ||| | |||||||| || |||| || || ||||| | ||||| | |||| Sbjct 16214 CTGGCAAACTGTCGAGGCCTGGCACGCCAAGGATACGCGGAGTCATGCCCACGCGTGATT 16273 Query 12965 GCGCCGAGAGTAGCGCTTGCATGCCCGTATAAGCGCCCGTCACGGCGTCGGGTTTGCCGA 13024 || | ||| || |||| |||||| || || || || || || | ||| | Sbjct 16274 TGGCTGCGAGCAGAGCTTTCATGCCGGTGTATTGACCGGT--TGGTGT-TGTACCGCCAA 16330 Query 13025 TCACGTTGCTCGNNNNNNNNNNNNNNNNNNNNCCTTCAGCGACGCGCACGACGACAGTGA 13084 ||| | ||||| ||||| ||| || || |||| | | Sbjct 16331 TCAGGGCGCTCGTAGTCGTCGCTTCGTCAGCGCCTTCTTTGACCCGTACCACGATAACGT 16390 Query 13085 CGGGCTTCGCCTGTGCGGCCATCGCTTGAAGCGTGCGCGCGAGCGTGCCCTTGTCGCCGG 13144 ||||| | ||| |||| || |||| || || || || ||||||||| |||||| Sbjct 16391 AAGGCTTGGTCTGGTCGGCGATGCCTTGCAGGCTGGCAGCCAGGGTGCCCTTGACGCCGG 16450 Query 13145 CCTTGCCGATCGCCGATTGAATGTTCGTCAGCAGCACGGGCGTATCGAGCGGGAACATCG 13204 ||||||||| || | ||| | ||| || | || || || || || || ||||| | || Sbjct 16451 CCTTGCCGACGGCGGTTTGCACGTTGGTGATGAGGACTGGAGTGTCCAGAGGGAA-AACG 16509 Query 13205 AG-GCGTCAGCATCGAGGGCGGTCGCGACGAGGCCGACAACGGCCGTTGATACGGTGCGA 13263 || | ||| ||||| ||||| || | ||||| || || || | | |||||| Sbjct 16510 AGTGGGTCCGCATCTTCAGCGGTGCAAACCATGCCGATGACTGCGGTGGGAATAGTGCGA 16569 Query 13264 ATCGGGCGCGTGCCTTCGTTAATTTCGAGTACGCGCACGCCGTG 13307 || ||||| ||||| ||||| | ||||| || ||||||||||| Sbjct 16570 ATGGGGCGGGTGCCGTCGTTGAGTTCGATGACCCGCACGCCGTG 16613 Score = 178 bits (196), Expect = 3e-40 Identities = 307/438 (70%), Gaps = 6/438 (1%) Strand=Plus/Plus Query 9922 TCCATGCCGAGC-TGAAACACCTTGCGGTATGCGTTGCCGGCCGCGCTTCCTTCCATGCC 9980 |||| ||| ||| || || | |||||| | || |||||||| | | || ||||| || Sbjct 12837 TCCA-GCCCAGCCTGGAAGATTTTGCGGAAAGCATTGCCGGCGGAACCACCCTCCATACC 12895 Query 9981 CGATTGATCGGCCATCACCAGCAACGGCGCCAGAGCCTTCGCCCCTTCGAGGCCTTTTTG 10040 | || || ||| | ||||| ||| ||||| |||| ||| | |||| ||| | Sbjct 12896 GGCCTGGTCCATCATGATCAGCAGCGGTGCCAGTTCCTTGGCCGCATCGATCCCTGACTT 12955 Query 10041 CTTGATCGTATCCATCGCGGGGCCGAGCTTCGCGAACCCGTTGAGCATGTTGTTATCGTC 10100 ||||| ||||| | || ||| || ||| || | ||||||||| ||| Sbjct 12956 TTTGATGACGTCCATAACTGGCGCGATTTTGCTGAAGCCTTGAAGCATGTTGCCTGGGTC 13015 Query 10101 GACGCC-GAGCATAAACGCTTTCTGGATCACGTCCGTCAGCGAGAGCATGTCTTTCTCGG 10159 ||||| | | | |||| | |||||| |||| |||| | ||||||||| || | Sbjct 13016 CACGCCTGCGTAGAAAC-CGCGCTGGATGGTGTCCATCAGACTCATCATGTCTTTTTCAG 13074 Query 10160 TCGTGCGCGTCGCGTCCTGTAGCTTCGCGGTGAATTCGGCCGCCTCGGCCGGCGTTT-TC 10218 | || || || |||||||| | ||||||| ||| ||||| || |||| ||| | || Sbjct 13075 TGGTCCGTGTGGCGTCCTGCATTTTCGCGGCGAACTCGGCAGCGTCGGT-GGCTTCCATC 13133 Query 10219 TTGAGCTGCACGCCGAGGTATGCCGTTGCCTCGCCCATGCCGCCGAGGATTGCTTGCGCG 10278 || | ||||||||||||||| || | || || || ||||||||||||| |||||| Sbjct 13134 TTCAACTGCACGCCGAGGTAGGCAGCGGCTTCACCGGTGCCGCCGAGGATGCTTTGCGCA 13193 Query 10279 CTGATACCTTGGCGCGTGAGCATCGTCATCATGTCCTGAAAATCCGCGGTCGTGCCGGGG 10338 || || || |||||| ||||||||||||||| | ||| || || || || ||||| || Sbjct 13194 CTTATGCCCTGGCGCCGGAGCATCGTCATCATATTCTGGAAGTCGGCAGTTGTGCCTGGC 13253 Query 10339 AGCCGGTCGCCGAGCTTG 10356 || ||||| || |||||| Sbjct 13254 AGGCGGTCCCCAAGCTTG 13271 Score = 98.7 bits (108), Expect = 2e-16 Identities = 169/243 (70%), Gaps = 12/243 (5%) Strand=Plus/Plus Query 8918 TGAACCCGCCCAGCTCGCCGAATACGCGCGACGGGCTATGAATGCCGAGCTTTTCCTTGA 8977 |||| ||||||| ||| |||| || ||||| || || || || ||||||||||| || | Sbjct 11272 TGAAACCGCCCAACTCAGCGAACACTCGCGATGGACTGTGTATCCCGAGCTTTTCTTTAA 11331 Query 8978 ACCATCCGACCGTGCTTGATGCGACGTTCG---TGATCGCCGCTTGAACAGCGCCGAGGC 9034 |||| |||| ||||||| | || ||| ||| || ||| || |||||||||| Sbjct 11332 ACCAGCCGA---TGCTTGAATCACCGATCGAGCCGATAGCACCTTTCACTGCGCCGAGGC 11388 Query 9035 CGCTAGTGATGCCATTCACGAGGCC---GGCGATCATGTTCGAGCCGAATTCGGAAAACT 9091 || || | ||| || || ||||| | |||||||| | |||||| |||| ||| | Sbjct 11389 CGGCGGTCAAGCCGTTGACCAGGCCGTTGACGATCATGCT---GCCGAACTCGGTAAATT 11445 Query 9092 TCGACGGCATATCGATGCCGAACCATTGCAGCACGGCCGCGAAAGCCGAGTAAAACAGGC 9151 | |||| || | |||||| | | || ||| | || || ||| || ||||| | Sbjct 11446 TGCCTGGCAGCTCCACGCCGAAGTAATTCATGACGCCGGCAAATGCCTGATAGAACAGCC 11505 Query 9152 CCA 9154 ||| Sbjct 11506 CCA 11508 >seq3053335 Length=1201 Score = 118 bits (130), Expect = 2e-22 Identities = 202/284 (71%), Gaps = 17/284 (6%) Strand=Plus/Minus Query 22881 ACGAGCGCATCGAGGTTCGCGTAATCGCCGGCCGCGCCGACGACGATCTTGCCGGCCGTC 22940 || || ||||| ||||| |||||||||||| | ||||||| || |||||| || Sbjct 483 ACCAGGGCATCAAGGTTGGCGTAATCGCCGCCGGCGCCGAGCGTGACCTTGCCAGC---G 427 Query 22941 TTCGCGCCTTCGTCCATCACGCGTTGCGGGGCTTGGTCGCGCATGCGTTGCAACCAGCCC 23000 || ||||| || | || ||| | |||||||| || ||||||| | |||| ||||||| Sbjct 426 TTGGCGCCCTCTTTCAGCACCTGCTGCGGGGCCTGTTCGCGCAATTGCTGCAGCCAGCCC 367 Query 23001 TTATTGACGTCCTGCAAC-AGCGGGTTAGCTGCA---CGGTCGGACGTTGCCGCACGCGA 23056 || || |||||||||| | | | | || || ||||| | ||| |||||| | Sbjct 366 TTGTTCACGTCCTGCAGCTTGGGAAATTTCTCCAAGTCGGTCTG-CGTGGCCGCATG--- 311 Query 23057 ACGGCCGTTGAAACCGATCGCGATGCGGTCGAGCGCTTGACGGCGCACGATCACGTCG-- 23114 | ||||| ||||||||| |||| ||||| |||| || |||| |||| || Sbjct 310 AGTGCCGTGGAAACCGATAACGATTCGGTCCTGCGC--GA-TGCGCTTTTGCACGGCGGC 254 Query 23115 CGAAT-GCGGGTCTGGAAGTCGGGAAACTTCGCCCACGCGTCGA 23157 |||| ||| | ||||||||||||||||||||| || |||| Sbjct 253 GGAATAGCGATCTTTGAAGTCGGGAAACTTCGCCCAGGCATCGA 210 >seq3063309 Length=1409 Score = 84.2 bits (92), Expect = 4e-12 Identities = 274/419 (65%), Gaps = 10/419 (2%) Strand=Plus/Plus Query 25224 CGCAACATTCTCAAGTCGCGGCAGATCGGCGCGACGTTCTATTTCGCACGCGAGGCGCTA 25283 |||||||| || || || ||| | ||| ||||| ||| ||||| |||| ||| | Sbjct 3 CGCAACATCCTGAAAAGCCGCCAGGTGGGCCTGACGTACTACTTCGCCGGCGAAGCGTTC 62 Query 25284 GACGATGCCTTGCAGACTGCACGCAATCAGATTTTTCTATCGGCCAGCAAGGCGCAGGCG 25343 || ||| ||| ||| | ||| ||| | || || ||||||||| ||||| || Sbjct 63 ATGGACGCCGTGCTGACCGGCGACAACCAGGTGTTCCTGTCGGCCAGCCGCTCGCAGTCG 122 Query 25344 CACGTTTTCA--AGTCGTACATTCGGCAGTTTGCC--GCCGAGGCCGCCGAGGTCGAATT 25399 | ||||| ||| ||||| |||||||| || | || ||| |||| | Sbjct 123 GAAATTTTCCGCAGT--TACATCATCCAGTTTGCAAAGCAGTGGTT--CGACATCGAGCT 178 Query 25400 GACCGGCGACCCGATCATTTTGCCGAACATGGCAGAGTTGATTTTCCTCGGCACGAATTC 25459 ||||||| ||||||||| | ||| || ||| || |||| | || ||| Sbjct 179 GACCGGCAACCCGATCACGCTCAGCAACGGCGCCGAGCTGCGTTTCTTGTCGACCAATAG 238 Query 25460 GCGAACGGCGCAGAGCTATCACGGCAATTTCTATTTCGACGAGTATTTTTGGGTGAGCGG 25519 | || || ||| |||| || ||| | |||| |||| |||||||||||| | | | Sbjct 239 CAGCACCGCCCAGGGCTACCATGGCCACGTCTACGTCGATGAGTATTTTTGGATACGTGA 298 Query 25520 GTTTCGCCAGCTCAACAAGGTTGCATCGGGCATGGCGATGCACAAGAAATGGCGAAAGAC 25579 || | | |||| || || || | ||||| | |||||||| ||||| || || Sbjct 299 CTTCGACAAACTCAGCACCGTGGCCAGTGCCATGGGCACCCACAAGAAGTGGCGCAAAAC 358 Query 25580 GTATTTTTCAACGCCGTCGAGCA-TCACGCACGAGGCTTACACCTTCTGGAGTGGCGAG 25637 || ||||| ||||| | ||| || ||||| | || ||| | |||||| |||||| Sbjct 359 CTACTTTTCGACGCC-CAGCGCAGTCTCGCACCAAGCGTACCCGTTCTGGTCGGGCGAG 416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 99504426230378