Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_016160.1
Length=36661
Score E
Sequences producing significant alignments: (Bits) Value
seq3088379 1083 0.0
seq3087926 127 5e-25
seq3087822 118 2e-22
seq3088057 87.8 4e-13
>seq3088379
Length=10556
Score = 1083 bits (1200), Expect = 0.0
Identities = 2152/3171 (68%), Gaps = 54/3171 (2%)
Strand=Plus/Plus
Query 2022 TCGACGACTTCATTTTCCGACCGCTGAGCATGTGATGGAAGAACCTAAATACACGATTGA 2081
||||||||||| | | | ||||| ||||||||| |||| ||| | | |||| || ||
Sbjct 2099 TCGACGACTTCCTCTCCAGACCGATGAGCATGTAATGGCAGATACCGACTACAGCATCGA 2158
Query 2082 CCTGCGAACCAATAACGGCTGGTGGGCAAGGCTGCAGTCCTGGTTTGTCGGCGGGCGTTT 2141
|||||| || | | ||||| | || | || ||||||||||| || |
Sbjct 2159 CCTGCGCACGCGCAGTCCATTCTGGGCGCGTATGGCGAGCTTCTTTGTCGGCGGCCGCCT 2218
Query 2142 AGTCACCCCAAATCAGGGCTCACAGACGGGGCCTGTTTCGGCCCACGGACACCTGGGCGA 2201
||||| || | | || |||||||| || || || || ||||| || |||| ||
Sbjct 2219 GGTCACACCTGAAAAAGGTTCACAGACAGGCCCAGTATCAGCCCAGGGTGTAGTGGGTGA 2278
Query 2202 TTCATCCATTAACGATGAACGGATACTGCAAATTTCGACTGTGTGGCGCT-GCGTGAGCC 2260
||| | | |||||||| || || || || |||| |||| |||| ||||| | |
Sbjct 2279 TTCGGTCGTAAACGATGAGCGCTCGCTCCAGATCGCGACCGTGTT-CGCTTGCGTGCGGC 2337
Query 2261 TGATTTCAACGCTCACGGCATGCTTACCGCTTGATGTCTTCGAAAC-AGACCAGAATGAC 2319
| || || | | || || ||| | || || || || ||| |||| | | ||| |||
Sbjct 2338 TTATCTCCAGCGTGACAGCTTGCATGCCACTGGACGTTTTCCAAACCAAAGGCGAA-GAC 2396
Query 2320 AACCGTAAAAAAGTGGATTTGAGCAATCCACTGGCGCGACTGCTGCGCTACTCACCGAAT 2379
| ||||| || | || || || ||||||||||| || ||| || ||
Sbjct 2397 AGG-GTAAAG--GTCGGGCTGGATAACCCGCTGGCGCGACTCCTTAAGTACCGCCCCAAC 2453
Query 2380 CAGTACATGACCGCCCAAGAATTCAGGGAGGCCATGACGATGCAGCTCTGTTTCTACGGT 2439
| | |||||| ||| || || | | ||||||||| |||||||| || | |||||
Sbjct 2454 GACTTCATGACTGCCTTTGATTTTCGTGTGGCCATGACTATGCAGCTTTGCTATTACGGC 2513
Query 2440 AACGCATATGCACTTGTGGACCGCAACAGCGCAGGTGACGTGATCAGCCTACTCCCGCTT 2499
|| || || || || | || ||||| | || || ||||| ||||| ||| | |||||
Sbjct 2514 AATGCCTACGCGCTGATTGAGCGCAATGGGGCTGGGGACGTAATCAGTCTAGTGCCGCTC 2573
Query 2500 CAGTCTGCCAATATGGATGTGAAACTCGTCGGaaaaaaaGTGGTTTATCGCTATCAACGC 2559
||||| || |||||||| | | || || | ||||| || |||| |||
Sbjct 2574 ATGTCTGTGAACATGGATGTTCGCTTGGAGGGTAAGCGGATCGTTTACCGATATCGCCGC 2633
Query 2560 GACAGCGAATACGCCGACTTTTCGCAGAAAGAGATTTTTCACCTTAAAGGCTTCGGATTC 2619
|||| | | ||||| || || ||| | || ||||||||||| || || || || ||
Sbjct 2634 GACACCAAGTACGCAGATTTCAAGCAAAGCGATATTTTTCACCTGAAGGGTTTTGGTTTT 2693
Query 2620 ACCGGGCTTGTAGGCCTGTCACCCATTGCTTTTGCCTGTAAATCGGCAGGTGTGGCAGTT 2679
| ||| || || ||||| || || |||||||| || || | || ||||| || |||
Sbjct 2694 AACGGCCTGGTTGGCCTTTCGCCGATTGCTTTCGCAGCGAAGACCGCCGGTGTAGCCGTT 2753
Query 2680 GCGATGGAGGACCAGCAGCGAGATTTCTTTGCCAACGGCGCCAAGTCTCCGCAAATCCTC 2739
|||||||| || |||||||| || || | ||||||||| |||||||| |||||| | ||
Sbjct 2754 GCGATGGAAGATCAGCAGCGCGACTTTTATGCCAACGGTGCCAAGTCCCCGCAACTTCTT 2813
Query 2740 TCAACTGGCGA---AAAAGTGCTAACTGAACAGCAGCGCTCCCAGGTCGAAGAGAACTTC 2796
|| || || ||| || || | | | ||||| | || ||||| ||||| |||
Sbjct 2814 ATGACAGGGGATGGAAAGGTTCTCAACAAGGATCAGCGGGCGCAAGTCGAGGAGAATTTC 2873
Query 2797 AAAGAGATCGCCGGCGGCCCGGTaaaaaaaCGCCTCTGGATTCTGGAAGCGGGTTTTTCT 2856
|| ||||| ||||||| || || || || || |||||||| |||| | |||||| |
Sbjct 2874 AAGGAGATATCCGGCGGGCCAGTCAAGAAGCGTCTCTGGATCTTGGAGGGAGGTTTTACG 2933
Query 2857 ACATCGGCAATTGGCGTAACTCCGCAGGATGCCGAAATGATGGCGTCCCGAAAATTTCAG 2916
|| ||| || ||||| | ||||| || ||||| | ||||| || |||| || |||
Sbjct 2934 ACCCAGGCCATAGGCGTGAGCCCGCAAGACGCCGAGACAATGGCTGCCAGAAAGTTCCAG 2993
Query 2917 GTAAGTGAACTGGCGCGATTCTTTGGCGTACCGCCTCACCTTGTCGGCGACGTCGAGAAA 2976
|| ||||| |||||||| ||||| ||||| ||||| || || || |||||||| || ||
Sbjct 2994 GTGAGTGAGCTGGCGCGGTTCTTCGGCGTGCCGCCGCATCTGGTGGGCGACGTTGAAAAG 3053
Query 2977 TCAACGAGCTGGGGATCGGGCATCGAGCAGCAGAATCTCGGCTTCCTGCAGTACACCCTG 3036
||||| |||||||| || || |||||||| ||||| || ||||| || |||||| | ||
Sbjct 3054 TCAACCAGCTGGGGGTCAGGTATCGAGCAACAGAACCTGGGCTTTCTCCAGTACGCGCTC 3113
Query 3037 CAGCCCTATATCTCCAGGTGGGAAAACAGCATTCAGCGGTGGCTTATTCCTGCTAAGGAT 3096
| || || | | ||||| | |||||| ||| |||||| | | | ||
Sbjct 3114 GACCCTTACCTTGAAATTTGGGAGGGCTGCATTCTGCGATGGCTTGTAAAGCCGAGCGAC 3173
Query 3097 GTTGGCCGCATTCATGCTGAGCACAACCTCGACGGCCTGCTGAGGGGCGATTCGGCATCC 3156
| || | |||||||||||||||| ||||| ||||||| || || || | ||
Sbjct 3174 CTCGGGGTGTTCCATGCTGAGCACAACCGAGACGGGTTGCTGAGTGGTGACTCAACCGCC 3233
Query 3157 CGCGCTGCCTTTATGAAGGCAATGGGAGAGGCAGGGCTACGCACCATCAACGAGATGCGA 3216
||||| | | || | || || | ||||| | || ||||||| ||
Sbjct 3234 CGCGCGAATTACCTAAAAACGTTGATTGATACCGGGCTGCTGACTCCCAACGAGGGCCGG 3293
Query 3217 CGAACGGACAACCTCCCGCCATTGCCGGGTGGCGATGTGGCAATGCGCCAGTCGCAATAC 3276
||| ||| ||| |||| || ||||| || || | ||||| |||||| ||
Sbjct 3294 CGAGTCAGCAATAGGCCGAAGCTGCCCGGCGGCGACGTCGCCACACGCCAATCGCAAAAC 3353
Query 3277 GTGCCGATC-ACCGATTTAGGAACCAACAAAGAGCCCCGTAA-TAACGGGGCTTAATTTT 3334
|||||| | | | | || | | ||||| ||||| | ||||| ||| ||||
Sbjct 3354 GTGCCGCTTGATCAACTTGGTCA-----AAAGAACCCCGCCCCTGGCGGGGTTTAGTTTT 3408
Query 3335 TATGGGGGC-CGTAATGCCTGAAATCGTAAAAACGCTGTCCTTCGACGAGACAGAAATCA 3393
| ||| | | |||| | | || ||| || || | ||| |||||| ||||||
Sbjct 3409 TCTGGAGCTACCCAATGGCAAATATTCAAAAGACCTTGGCGTTCACCGAGACTCAAATCA 3468
Query 3394 AATTCACCGGTGACGGTAAACAGGGGATTTTTGAAGGCTACGCCTCTGTTTTTAATAACA 3453
| ||| || || || || || | || || || |||||| |||||| | ||
Sbjct 3469 AGTTCTCCTCGGATGGCAAGGTTGGTGTGTTCGAGGGGTACGCCAGTGTTTTCGACGTCA 3528
Query 3454 CCGATTCCGATGGCGACATCATTCTGCCCGGGGCGTTTAAAAACGCGCTGGCGAACCAGA 3513
||| || || ||||||||||| |||||||| || || || || || || | || |
Sbjct 3529 TCGACTCAGACGGCGACATCATCCTGCCCGGCGCCTTCAAGAAGGCTTTGTCTTCGCAAA 3588
Query 3514 CCCGAAAAGTGGCGATGTTTTTTAACCACAGGACGTGGGAACTGCCGGTTGGCAAATGGG 3573
||| |||| | |||||||||||||| ||| | | ||||| ||||| || |||
Sbjct 3589 GCCGCCAAGTCGGCATGTTTTTTAACCATCAGACCTACGGCCTGCCTGTTGGAAAGTGGC 3648
Query 3574 ACAGCCTGGCTGAAGACGAAAAAGGCCTGTATGTGCGCGGTCAACTTACCCCAGGACACA 3633
| ||||| || ||| ||||| || | || | || | || || || ||
Sbjct 3649 AGTCGCTGGCGGAGGACAGCAAAGGACTCTTCGTTGGAGGCGAGCTGACGCCCGGTTTGT 3708
Query 3634 GCGGCGCCGCTGACCTGAAAGCGGCAATGCAGCACGGTACGGTTGAAGGTATGTCGGTTG 3693
| | || ||||| || || ||| | || || || || ||| |||||||||
Sbjct 3709 CGGTCTCCAACGACCTCCGGGCAGCCATGGAACATAAGACCGTCGAGGGTTTGTCGGTTG 3768
Query 3694 GCTTTTCCGTTTCGAAAGACGATTACACCATCATTCCAACAGGCCGCATTTTTAAGAATA 3753
|||| |||| || ||||||||| || |||| || |||||| || | |||
Sbjct 3769 GCTTCACCGTCCTCAAGGACGATTACGCCGTCATCGATACCGGCCGCGCATTCAGCAATG 3828
Query 3754 TCCAGGCTCTGCGCGAAATCAGCGTCTGCACTTTCCCCGCCAACGAACAGGCTGGCATCG 3813
||||||| ||||| || |||||| | ||||| || || ||||| || ||||| ||| |
Sbjct 3829 TCCAGGCCCTGCGAGAGATCAGCATTTGCACCTTTCCTGCCAATGAGCAGGCGACCATTG 3888
Query 3814 CAGCCATGAAAAGTGTCGATGGTATTGAA----ACGATTCGTGATGTGGAGAACTGGCTG 3869
||||||||||| |||| || || || ||||| ||||| ||| | ||||||
Sbjct 3889 ACGCCATGAAAAGC----ATGGAATCGATCAGCACCATTCGCGATGTAGAGCATTGGCTG 3944
Query 3870 AGGGATTCAGTCGGCCTCACCAAATCACAGGCAGTTGGGCTAATTGCCCGGTTTAAGTCA 3929
|||||||| | ||| || | || || || || | || || || |||||| | |||||
Sbjct 3945 AGGGATTCGGCCGGTCTTTCGAAGTCGCAAGCCCTGGGCCTGATAGCCCGGATCAAGTCC 4004
Query 3930 GCGATTCGGAGCGAGTCCGAGGGCGACGGAAACGAAGCACAAATAAACGCTCTGCTTCAG 3989
|| ||||||| || ||||| || | || |||| | ||| | || |
Sbjct 4005 GCAGTTCGGAGTGATTCCGAAGGTGGCG------------AAATCACCGCGATCCTGGAT 4052
Query 3990 AGCATCAAATCTTTCCCTTCTAACTTAGGTAAATAATT-ATGTCTGAACTCGCTCTCATT 4048
||||||| || ||||| ||| |||| || ||| ||||| ||| | || | |||
Sbjct 4053 CGCATCAAGTCATTCCCATCTG---TAGGAAATTAAACCATGTCCGAATTGGCCCAAATT 4109
Query 4049 CAAAAAGCTATCGAAGAATCCCAGCAGAAAATGACCCAGCTTTTCAATGCGCAGAAAGCA 4108
||||| || |||||| | || ||| ||||| |||| ||| | ||||| || |
Sbjct 4110 CAAAAGGCAATCGAAACCGCGCAAACGAACATGACTGAGCTGTTCGAGGCGCAAAAGAAA 4169
Query 4109 GAAATCGAAAGCACAGGCCAGGTTTCCAAACAGTTGCAGTCCGACCTGATGAAAGTACAG 4168
|| ||| ||| ||| | || ||| || | || |||||||| || ||| |||
Sbjct 4170 GAGATCACCGCCACCGGCGAAGTGAGCAAGAAGATTCAAACCGACCTGCAGACAGTGCAG 4229
Query 4169 GAAGAGCTGACCAAATCCGGCACTCGCCTCTTCGATCTGGAACAGAAACTGGCATCCGGC 4228
|| || |||| | ||||| | ||| | |||||||| || ||| || || ||||
Sbjct 4230 GACGAACTGAAAACGGCCGGCTCCCGCTTGTTCGATCTCGAGTCGAAGCTTGCCGGCGGC 4289
Query 4229 GCT---GAGAATCCTGGTGAGAAGAAATCCTTCTCTGAACGGGCTGCTGAAGAGCTTATT 4285
|| || || |||| | |||||||| ||| |||| ||||| || ||||| || |
Sbjct 4290 ACTCTCGATAACCCTGAAGCCAAGAAATCGTTCGCTGAGCGGGCGGCCGAAGATCTGAAG 4349
Query 4286 AAGTCATGGGACGG---TAAACAGGGCACCTTTGGCGCTAAAACGTTTAACAAGTCACTA 4342
||| ||| |||| || |||| | | || | | || | |||| | ||
Sbjct 4350 AAGGGCTGGAACGGCTCTACGTCCGGCAAAGTGGACGTGATTAGCTTCAGCAAGGCTCTC 4409
Query 4343 GGCAGTGACGCTGATTCGGCTGGCTCACTGATCCAGCCTATGCAGATCCCAGGCATCATC 4402
||| | ||| | ||| ||||| | || ||||||| ||||| ||| ||||| ||
Sbjct 4410 GGCGCAGGCGCCGCTTCTGCTGGTGCGTTGGTCCAGCCCCAGCAGAACCCCGGCATTCTC 4469
Query 4403 ATGCCAGGCCTGCGCCGTCTTACCATTCGTGATCTGCTGGCTCAGGGCCGC---ACTTCC 4459
||||| ||||||||||| || ||||| ||||| |||||||| || || ||| ||||||
Sbjct 4470 ATGCCCGGCCTGCGCCGGCTGACCATCCGTGACCTGCTGGCGCAAGGTCGCACGACTTCC 4529
Query 4460 AGTAACGCTCTGGAATATGTGCGTGAAGAGGTGTTTACCAATAACGCCGACGTGGTGGCA 4519
|||| | || || ||||| || | || || | ||| | ||||| ||| ||
Sbjct 4530 ---GACGCCATCGAGTACGTGCGCGAGAACGTATTCATCAACAGCGCCGCTCCGGTCGCC 4586
Query 4520 GAGAAAGCACTGAAGCCAGAATCGGATATCACCTTCAGCAAACAAACCGCGAACGTGAAG 4579
||| | |||||||| || || | | ||||||| ||| |||| || ||||| |||
Sbjct 4587 GAGGGCACGCTGAAGCCCGAGTCCAACCTGACCTTCACCAAGGAAACGGCCAACGTCAAG 4646
Query 4580 ACCATCGCGCACTGGGTGCAGGCATCACGTCAGGTGATGGATGATGCGCCAATGCTTCAG 4639
|| | || |||||| | ||||| || || ||| | ||| ||| || || ||||| |
Sbjct 4647 ACGCTGGCTCACTGGATTCAGGCTTCTCGCCAGATCATGTCTGACGCTCCGATGCTGGAA 4706
Query 4640 TCCTACATTAACAACCGCCTCATGTACGGCCTGGCACTGAAGGAAGAGGGCCAGCTGCTG 4699
||||| | ||| ||||| ||| || |||| || ||||| || ||||| ||
Sbjct 4707 TCCTATGTGAACGGTCGCCTGTTGTTTGGTCTGGACTTGGTCGAAGAAGGGCAGCTTCTC 4766
Query 4700 AACGGCGACGGTACCGGGGATAACCTGGAAGGGCTGAACAAAGTGGCAACCGCCTATGAC 4759
|||||||| || ||||| || |||||| || ||||||||||| || |||||||| |||
Sbjct 4767 AACGGCGATGGCACCGGTGACAACCTGATCGGCCTGAACAAAGTCGCGACCGCCTACGAC 4826
Query 4760 ACCTCGCTGAATGCCACCGGCGACACCCGCGCTGACATTATCGCTCACGCTATTTATCAG 4819
|| |||| ||||||||||||||||| ||||||||| || || ||||| || | |||
Sbjct 4827 ACTACGCTCAATGCCACCGGCGACACTCGCGCTGACCAGATTGCACACGCGATCTTCCAG 4886
Query 4820 GTGACCGAGTCTGAGTTCAGCGCTTCCGGTATCGTCCTGAACCCGCGCGACTGGCACAAC 4879
| ||| || |||||| ||||| || | || ||||||| |||||||||||| |
Sbjct 4887 ACCAGCGAATCCGAGTTCGAGGCTTCGGGCCTGATCTTGAACCCCCGCGACTGGCACGCC 4946
Query 4880 ATCGCGTTGCTGAAAGACAATGAAGGCCGCTATATCTTCGGTGGTCCTCAGGCATTCACC 4939
|||||| ||||||||||| ||| || || || ||||| || || ||| ||| ||| ||
Sbjct 4947 ATCGCGCTGCTGAAAGACGGTGATGGTCGTTACATCTTTGGCGGCCCTGCGGCGTTCGCC 5006
Query 4940 AGTAACATCATGTGGGGCTTGCCAGTGGTTCCGACTAAGGCGCAGGCCGCCGGCACCTTT 4999
|| |||||||||| | || || ||| | || || || ||||| || || ||
Sbjct 5007 GCCAAGGTCATGTGGGGGCTTCCTGTTGTTGCCACCAAAGCCCAGGCACAGGGAACTTTC 5066
Query 5000 ACCGTAGGCGGTTTCGATATGGCCTCACAGGTCTGGGATCGCATGGATGCCACCGTGGAA 5059
|| || ||||| ||||| ||||| || ||| ||||||| |||||||| || || | ||
Sbjct 5067 ACTGTTGGCGGCTTCGACATGGCTTCGCAGATCTGGGACCGCATGGACGCGACTATCGAG 5126
Query 5060 GTTAGCCGTGAAGACCGCGATAACTTCGTGAAAAACATGCTGACCATCCTGTGCGAAGAG 5119
| ||| | || ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 5127 ATCAGCAACCAGGATCGCGACAACTTCGTGAAAAACATGCTGACCATCCTGTGCGAAGAG 5186
Query 5120 CGTCTGGCGCTGGCGCATTATCGCCCGACAGCAATCATCAAGGGCACCTTC 5170
|| |||||| | | || ||||| || || ||||||||||| ||| | |||
Sbjct 5187 CGCCTGGCGGTTACCCACTATCGTCCTACCGCAATCATCAAAGGCGCTTTC 5237
>seq3087926
Length=6391
Score = 127 bits (140), Expect = 5e-25
Identities = 323/484 (67%), Gaps = 12/484 (2%)
Strand=Plus/Minus
Query 12684 GATCCGTCGCTGGATGAATGCAATGGCACGCTGACGGCCTGCAAACTCCGATTCGGCGAA 12743
|||||| | |||| | ||||| ||| ||| || ||||||| | |||||||||||
Sbjct 5396 GATCCGGCCAAGGATCAGTGCAAGGGCTGCCTGTCGTCCTGCAAGTTGCGATTCGGCGAG 5337
Query 12744 AATAACGAACTCTCGTTTGGTGGCTTCCCTGGTACGTCGCTGAT---CAGGAGTTGA-TA 12799
|| |||||||| || ||||| || ||||| | ||| || || | |||| ||| |
Sbjct 5336 AACAACGAACTGTCCTTTGGCGGATTCCCCGCCGTGTCTCTCATTGCCCGGAGCTGACCA 5277
Query 12800 TGCGTCAGAAAACCATCGATGCGATTATGGCGCATGCTGCAGCTGAATATCCTCGTGAGT 12859
|||| || | | ||| | || || ||||||||| || | || ||||| || ||||
Sbjct 5276 TGCGCAAGCACATCATTGCGGCCATCCAGGCGCATGCGGCGACGGAGTATCCGCGAGAGT 5217
Query 12860 GTTGCGGCGTGGTGGCGCAAAAGAGCCGGGTAGAGAAATATTTTCCATGTAGTAACCTCG 12919
| |||||| || || | | |||| | |||| || || || || | ||| | |
Sbjct 5216 GCTGCGGCCTGCTGTTGGCCGTGGGCCGCGCGCAGAAGTACTTCCCGTGCCGGAACATAG 5157
Query 12920 CTACCGAGCCGACAGAACATTTTCACCTGTCGCCAGAAGACTATGCAGCTGCTGAGGACT 12979
| | ||||||| ||| | || | || || || ||||| || || || || ||||
Sbjct 5156 CCAAGGAGCCGAACGAAGAGTTCCGGCTTGACCCCGAGGACTACGCCGCGGCGGAAGACT 5097
Query 12980 GGGGTACGGTGATCGCCATCGTTCACAGTCACCCTGACGCCACAACGCAGCCGAGCGAAC 13039
||| |||||||| |||||| ||| ||||| |||||||| | |||| | | ||
Sbjct 5096 TGGGCGAGGTGATCGGCATCGTCCACTCGCACCCGGACGCCACCA-GCAG--GCCCTCAC 5040
Query 13040 TGGATAA---AGCGCAATGCGACGCAACGCTTTTACCCTGGCATATTGTGAGCTGGCCGG 13096
| || | || || || || ||| ||| || ||||| || || ||||| |
Sbjct 5039 CGCATGACTTGGCCATGTGTGAGGCCACGGCTTTGCCATGGCACATCCTGTCTTGGCCCG 4980
Query 13097 ATGGGGATTTACGCACCATCCAGCC-GCGCGGAGAACTGCCACTGCTGGAGCGTCCGTTT 13155
| || || | ||||| || ||| ||| | || || ||| ||||| |||| |||||
Sbjct 4979 AGGGTGACTGGCGCACGATTACGCCGGCGGGTAGCAC-GCCGCTGCTCAAGCGCCCGTTC 4921
Query 13156 GTGC 13159
||||
Sbjct 4920 GTGC 4917
>seq3087822
Length=6084
Score = 118 bits (130), Expect = 2e-22
Identities = 229/336 (68%), Gaps = 4/336 (1%)
Strand=Plus/Minus
Query 12691 CGCTGGATGAATGCAATGGCACGCTGACGGCCTGCAAACTCCGATTCGGCGAAAATAACG 12750
|||| || | ||||| ||| ||| || ||||||| | || ||||||||||| ||||
Sbjct 2105 CGCTTGACCAGTGCAAGGGCTGTCTGTCGTCCTGCAAGTTGCGCTTCGGCGAAAACAACG 2046
Query 12751 AACTCTCGTTTGGTGGCTTCCCTGGTACGTCGCTGA---TCAGGAGTTGA-TATGCGTCA 12806
|||| || || ||||| ||||| | || |||| || |||| ||| |||||| |
Sbjct 2045 AACTGTCCTTCGGTGGATTCCCCGCCGTTTCCCTGATTGTCCGGAGCTGACTATGCGCAA 1986
Query 12807 GAAAACCATCGATGCGATTATGGCGCATGCTGCAGCTGAATATCCTCGTGAGTGTTGCGG 12866
| | | ||| | || ||| |||||| || || || |||||||| || || || |||||
Sbjct 1985 GCACATCATTGCCGCTATTCAGGCGCACGCGGCGGCGGAATATCCGCGCGAATGCTGCGG 1926
Query 12867 CGTGGTGGCGCAAAAGAGCCGGGTAGAGAAATATTTTCCATGTAGTAACCTCGCTACCGA 12926
|| || | | |||| | |||| || || || || | ||| |||| || ||
Sbjct 1925 GCTGCTGCTGGCCGTGGGCCGCGCTCAGAAGTACTTCCCGTGCCGGAACATCGCCACGGA 1866
Query 12927 GCCGACAGAACATTTTCACCTGTCGCCAGAAGACTATGCAGCTGCTGAGGACTGGGGTAC 12986
||||| ||| | || | || || || | ||| || || || ||||||| |||
Sbjct 1865 GCCGAGCGAAGAGTTCAAGCTCGATCCCGAGGGCTACGCTGCGGCAGAGGACTTGGGCGA 1806
Query 12987 GGTGATCGCCATCGTTCACAGTCACCCTGACGCCAC 13022
|||||||| || || ||| ||||| ||||| ||
Sbjct 1805 GGTGATCGGTATAGTCCACTCACACCCGGACGCAAC 1770
>seq3088057
Length=7030
Score = 87.8 bits (96), Expect = 4e-13
Identities = 150/218 (69%), Gaps = 6/218 (3%)
Strand=Plus/Plus
Query 15409 TTGATAAATGGACGCTTTATCAGGTTGCTCAGTATTGTGATCAGATGGTACCAGACGGCA 15468
||||| ||| ||||||||| | || || || || ||||||||||| || || || |
Sbjct 5724 TTGATCGCTGGTCGCTTTATCGCATCGCGCAATACTGCGATCAGATGGTGCCGGATGGAA 5783
Query 15469 AAGGGGGCAACGGTACAGAACCACGCTATACCTGCAACGTGTACATTCAGGACCGGAACG 15528
|||| ||| | || || |||| |||||||||| ||||| | || | | | ||
Sbjct 5784 AAGG------CGGCATGGAGCCGCGCTTTACCTGCAACCTGTACCTGCAAAAGCAGGCCG 5837
Query 15529 ACGCCTACACAGTCCTACGTGATTTTGCCGCTATCTTCCGTGGCATGACCTACTGGGGCG 15588
| |||||| | || || | ||| | || | ||||| | || || ||||||||| ||
Sbjct 5838 AGGCCTACGCGGTGCTGCAGGATCTGGCATCGATCTTTCACGGTCTGGCCTACTGGGACG 5897
Query 15589 GGGATCAGATTGTGGCCCTGGCTGACATGCCGCGCGAT 15626
| ||||| |||| | || || |||||| |||||
Sbjct 5898 GCAGCCAGATCGTGGTCAACGCCGATATGCCGGGCGAT 5935
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 112895399542586
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |