Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09] 3,088,511 sequences; 2,785,377,831 total letters Query= NC_016160.1 Length=36661 Score E Sequences producing significant alignments: (Bits) Value seq3088379 1083 0.0 seq3087926 127 5e-25 seq3087822 118 2e-22 seq3088057 87.8 4e-13 >seq3088379 Length=10556 Score = 1083 bits (1200), Expect = 0.0 Identities = 2152/3171 (68%), Gaps = 54/3171 (2%) Strand=Plus/Plus Query 2022 TCGACGACTTCATTTTCCGACCGCTGAGCATGTGATGGAAGAACCTAAATACACGATTGA 2081 ||||||||||| | | | ||||| ||||||||| |||| ||| | | |||| || || Sbjct 2099 TCGACGACTTCCTCTCCAGACCGATGAGCATGTAATGGCAGATACCGACTACAGCATCGA 2158 Query 2082 CCTGCGAACCAATAACGGCTGGTGGGCAAGGCTGCAGTCCTGGTTTGTCGGCGGGCGTTT 2141 |||||| || | | ||||| | || | || ||||||||||| || | Sbjct 2159 CCTGCGCACGCGCAGTCCATTCTGGGCGCGTATGGCGAGCTTCTTTGTCGGCGGCCGCCT 2218 Query 2142 AGTCACCCCAAATCAGGGCTCACAGACGGGGCCTGTTTCGGCCCACGGACACCTGGGCGA 2201 ||||| || | | || |||||||| || || || || ||||| || |||| || Sbjct 2219 GGTCACACCTGAAAAAGGTTCACAGACAGGCCCAGTATCAGCCCAGGGTGTAGTGGGTGA 2278 Query 2202 TTCATCCATTAACGATGAACGGATACTGCAAATTTCGACTGTGTGGCGCT-GCGTGAGCC 2260 ||| | | |||||||| || || || || |||| |||| |||| ||||| | | Sbjct 2279 TTCGGTCGTAAACGATGAGCGCTCGCTCCAGATCGCGACCGTGTT-CGCTTGCGTGCGGC 2337 Query 2261 TGATTTCAACGCTCACGGCATGCTTACCGCTTGATGTCTTCGAAAC-AGACCAGAATGAC 2319 | || || | | || || ||| | || || || || ||| |||| | | ||| ||| Sbjct 2338 TTATCTCCAGCGTGACAGCTTGCATGCCACTGGACGTTTTCCAAACCAAAGGCGAA-GAC 2396 Query 2320 AACCGTAAAAAAGTGGATTTGAGCAATCCACTGGCGCGACTGCTGCGCTACTCACCGAAT 2379 | ||||| || | || || || ||||||||||| || ||| || || Sbjct 2397 AGG-GTAAAG--GTCGGGCTGGATAACCCGCTGGCGCGACTCCTTAAGTACCGCCCCAAC 2453 Query 2380 CAGTACATGACCGCCCAAGAATTCAGGGAGGCCATGACGATGCAGCTCTGTTTCTACGGT 2439 | | |||||| ||| || || | | ||||||||| |||||||| || | ||||| Sbjct 2454 GACTTCATGACTGCCTTTGATTTTCGTGTGGCCATGACTATGCAGCTTTGCTATTACGGC 2513 Query 2440 AACGCATATGCACTTGTGGACCGCAACAGCGCAGGTGACGTGATCAGCCTACTCCCGCTT 2499 || || || || || | || ||||| | || || ||||| ||||| ||| | ||||| Sbjct 2514 AATGCCTACGCGCTGATTGAGCGCAATGGGGCTGGGGACGTAATCAGTCTAGTGCCGCTC 2573 Query 2500 CAGTCTGCCAATATGGATGTGAAACTCGTCGGaaaaaaaGTGGTTTATCGCTATCAACGC 2559 ||||| || |||||||| | | || || | ||||| || |||| ||| Sbjct 2574 ATGTCTGTGAACATGGATGTTCGCTTGGAGGGTAAGCGGATCGTTTACCGATATCGCCGC 2633 Query 2560 GACAGCGAATACGCCGACTTTTCGCAGAAAGAGATTTTTCACCTTAAAGGCTTCGGATTC 2619 |||| | | ||||| || || ||| | || ||||||||||| || || || || || Sbjct 2634 GACACCAAGTACGCAGATTTCAAGCAAAGCGATATTTTTCACCTGAAGGGTTTTGGTTTT 2693 Query 2620 ACCGGGCTTGTAGGCCTGTCACCCATTGCTTTTGCCTGTAAATCGGCAGGTGTGGCAGTT 2679 | ||| || || ||||| || || |||||||| || || | || ||||| || ||| Sbjct 2694 AACGGCCTGGTTGGCCTTTCGCCGATTGCTTTCGCAGCGAAGACCGCCGGTGTAGCCGTT 2753 Query 2680 GCGATGGAGGACCAGCAGCGAGATTTCTTTGCCAACGGCGCCAAGTCTCCGCAAATCCTC 2739 |||||||| || |||||||| || || | ||||||||| |||||||| |||||| | || Sbjct 2754 GCGATGGAAGATCAGCAGCGCGACTTTTATGCCAACGGTGCCAAGTCCCCGCAACTTCTT 2813 Query 2740 TCAACTGGCGA---AAAAGTGCTAACTGAACAGCAGCGCTCCCAGGTCGAAGAGAACTTC 2796 || || || ||| || || | | | ||||| | || ||||| ||||| ||| Sbjct 2814 ATGACAGGGGATGGAAAGGTTCTCAACAAGGATCAGCGGGCGCAAGTCGAGGAGAATTTC 2873 Query 2797 AAAGAGATCGCCGGCGGCCCGGTaaaaaaaCGCCTCTGGATTCTGGAAGCGGGTTTTTCT 2856 || ||||| ||||||| || || || || || |||||||| |||| | |||||| | Sbjct 2874 AAGGAGATATCCGGCGGGCCAGTCAAGAAGCGTCTCTGGATCTTGGAGGGAGGTTTTACG 2933 Query 2857 ACATCGGCAATTGGCGTAACTCCGCAGGATGCCGAAATGATGGCGTCCCGAAAATTTCAG 2916 || ||| || ||||| | ||||| || ||||| | ||||| || |||| || ||| Sbjct 2934 ACCCAGGCCATAGGCGTGAGCCCGCAAGACGCCGAGACAATGGCTGCCAGAAAGTTCCAG 2993 Query 2917 GTAAGTGAACTGGCGCGATTCTTTGGCGTACCGCCTCACCTTGTCGGCGACGTCGAGAAA 2976 || ||||| |||||||| ||||| ||||| ||||| || || || |||||||| || || Sbjct 2994 GTGAGTGAGCTGGCGCGGTTCTTCGGCGTGCCGCCGCATCTGGTGGGCGACGTTGAAAAG 3053 Query 2977 TCAACGAGCTGGGGATCGGGCATCGAGCAGCAGAATCTCGGCTTCCTGCAGTACACCCTG 3036 ||||| |||||||| || || |||||||| ||||| || ||||| || |||||| | || Sbjct 3054 TCAACCAGCTGGGGGTCAGGTATCGAGCAACAGAACCTGGGCTTTCTCCAGTACGCGCTC 3113 Query 3037 CAGCCCTATATCTCCAGGTGGGAAAACAGCATTCAGCGGTGGCTTATTCCTGCTAAGGAT 3096 | || || | | ||||| | |||||| ||| |||||| | | | || Sbjct 3114 GACCCTTACCTTGAAATTTGGGAGGGCTGCATTCTGCGATGGCTTGTAAAGCCGAGCGAC 3173 Query 3097 GTTGGCCGCATTCATGCTGAGCACAACCTCGACGGCCTGCTGAGGGGCGATTCGGCATCC 3156 | || | |||||||||||||||| ||||| ||||||| || || || | || Sbjct 3174 CTCGGGGTGTTCCATGCTGAGCACAACCGAGACGGGTTGCTGAGTGGTGACTCAACCGCC 3233 Query 3157 CGCGCTGCCTTTATGAAGGCAATGGGAGAGGCAGGGCTACGCACCATCAACGAGATGCGA 3216 ||||| | | || | || || | ||||| | || ||||||| || Sbjct 3234 CGCGCGAATTACCTAAAAACGTTGATTGATACCGGGCTGCTGACTCCCAACGAGGGCCGG 3293 Query 3217 CGAACGGACAACCTCCCGCCATTGCCGGGTGGCGATGTGGCAATGCGCCAGTCGCAATAC 3276 ||| ||| ||| |||| || ||||| || || | ||||| |||||| || Sbjct 3294 CGAGTCAGCAATAGGCCGAAGCTGCCCGGCGGCGACGTCGCCACACGCCAATCGCAAAAC 3353 Query 3277 GTGCCGATC-ACCGATTTAGGAACCAACAAAGAGCCCCGTAA-TAACGGGGCTTAATTTT 3334 |||||| | | | | || | | ||||| ||||| | ||||| ||| |||| Sbjct 3354 GTGCCGCTTGATCAACTTGGTCA-----AAAGAACCCCGCCCCTGGCGGGGTTTAGTTTT 3408 Query 3335 TATGGGGGC-CGTAATGCCTGAAATCGTAAAAACGCTGTCCTTCGACGAGACAGAAATCA 3393 | ||| | | |||| | | || ||| || || | ||| |||||| |||||| Sbjct 3409 TCTGGAGCTACCCAATGGCAAATATTCAAAAGACCTTGGCGTTCACCGAGACTCAAATCA 3468 Query 3394 AATTCACCGGTGACGGTAAACAGGGGATTTTTGAAGGCTACGCCTCTGTTTTTAATAACA 3453 | ||| || || || || || | || || || |||||| |||||| | || Sbjct 3469 AGTTCTCCTCGGATGGCAAGGTTGGTGTGTTCGAGGGGTACGCCAGTGTTTTCGACGTCA 3528 Query 3454 CCGATTCCGATGGCGACATCATTCTGCCCGGGGCGTTTAAAAACGCGCTGGCGAACCAGA 3513 ||| || || ||||||||||| |||||||| || || || || || || | || | Sbjct 3529 TCGACTCAGACGGCGACATCATCCTGCCCGGCGCCTTCAAGAAGGCTTTGTCTTCGCAAA 3588 Query 3514 CCCGAAAAGTGGCGATGTTTTTTAACCACAGGACGTGGGAACTGCCGGTTGGCAAATGGG 3573 ||| |||| | |||||||||||||| ||| | | ||||| ||||| || ||| Sbjct 3589 GCCGCCAAGTCGGCATGTTTTTTAACCATCAGACCTACGGCCTGCCTGTTGGAAAGTGGC 3648 Query 3574 ACAGCCTGGCTGAAGACGAAAAAGGCCTGTATGTGCGCGGTCAACTTACCCCAGGACACA 3633 | ||||| || ||| ||||| || | || | || | || || || || Sbjct 3649 AGTCGCTGGCGGAGGACAGCAAAGGACTCTTCGTTGGAGGCGAGCTGACGCCCGGTTTGT 3708 Query 3634 GCGGCGCCGCTGACCTGAAAGCGGCAATGCAGCACGGTACGGTTGAAGGTATGTCGGTTG 3693 | | || ||||| || || ||| | || || || || ||| ||||||||| Sbjct 3709 CGGTCTCCAACGACCTCCGGGCAGCCATGGAACATAAGACCGTCGAGGGTTTGTCGGTTG 3768 Query 3694 GCTTTTCCGTTTCGAAAGACGATTACACCATCATTCCAACAGGCCGCATTTTTAAGAATA 3753 |||| |||| || ||||||||| || |||| || |||||| || | ||| Sbjct 3769 GCTTCACCGTCCTCAAGGACGATTACGCCGTCATCGATACCGGCCGCGCATTCAGCAATG 3828 Query 3754 TCCAGGCTCTGCGCGAAATCAGCGTCTGCACTTTCCCCGCCAACGAACAGGCTGGCATCG 3813 ||||||| ||||| || |||||| | ||||| || || ||||| || ||||| ||| | Sbjct 3829 TCCAGGCCCTGCGAGAGATCAGCATTTGCACCTTTCCTGCCAATGAGCAGGCGACCATTG 3888 Query 3814 CAGCCATGAAAAGTGTCGATGGTATTGAA----ACGATTCGTGATGTGGAGAACTGGCTG 3869 ||||||||||| |||| || || || ||||| ||||| ||| | |||||| Sbjct 3889 ACGCCATGAAAAGC----ATGGAATCGATCAGCACCATTCGCGATGTAGAGCATTGGCTG 3944 Query 3870 AGGGATTCAGTCGGCCTCACCAAATCACAGGCAGTTGGGCTAATTGCCCGGTTTAAGTCA 3929 |||||||| | ||| || | || || || || | || || || |||||| | ||||| Sbjct 3945 AGGGATTCGGCCGGTCTTTCGAAGTCGCAAGCCCTGGGCCTGATAGCCCGGATCAAGTCC 4004 Query 3930 GCGATTCGGAGCGAGTCCGAGGGCGACGGAAACGAAGCACAAATAAACGCTCTGCTTCAG 3989 || ||||||| || ||||| || | || |||| | ||| | || | Sbjct 4005 GCAGTTCGGAGTGATTCCGAAGGTGGCG------------AAATCACCGCGATCCTGGAT 4052 Query 3990 AGCATCAAATCTTTCCCTTCTAACTTAGGTAAATAATT-ATGTCTGAACTCGCTCTCATT 4048 ||||||| || ||||| ||| |||| || ||| ||||| ||| | || | ||| Sbjct 4053 CGCATCAAGTCATTCCCATCTG---TAGGAAATTAAACCATGTCCGAATTGGCCCAAATT 4109 Query 4049 CAAAAAGCTATCGAAGAATCCCAGCAGAAAATGACCCAGCTTTTCAATGCGCAGAAAGCA 4108 ||||| || |||||| | || ||| ||||| |||| ||| | ||||| || | Sbjct 4110 CAAAAGGCAATCGAAACCGCGCAAACGAACATGACTGAGCTGTTCGAGGCGCAAAAGAAA 4169 Query 4109 GAAATCGAAAGCACAGGCCAGGTTTCCAAACAGTTGCAGTCCGACCTGATGAAAGTACAG 4168 || ||| ||| ||| | || ||| || | || |||||||| || ||| ||| Sbjct 4170 GAGATCACCGCCACCGGCGAAGTGAGCAAGAAGATTCAAACCGACCTGCAGACAGTGCAG 4229 Query 4169 GAAGAGCTGACCAAATCCGGCACTCGCCTCTTCGATCTGGAACAGAAACTGGCATCCGGC 4228 || || |||| | ||||| | ||| | |||||||| || ||| || || |||| Sbjct 4230 GACGAACTGAAAACGGCCGGCTCCCGCTTGTTCGATCTCGAGTCGAAGCTTGCCGGCGGC 4289 Query 4229 GCT---GAGAATCCTGGTGAGAAGAAATCCTTCTCTGAACGGGCTGCTGAAGAGCTTATT 4285 || || || |||| | |||||||| ||| |||| ||||| || ||||| || | Sbjct 4290 ACTCTCGATAACCCTGAAGCCAAGAAATCGTTCGCTGAGCGGGCGGCCGAAGATCTGAAG 4349 Query 4286 AAGTCATGGGACGG---TAAACAGGGCACCTTTGGCGCTAAAACGTTTAACAAGTCACTA 4342 ||| ||| |||| || |||| | | || | | || | |||| | || Sbjct 4350 AAGGGCTGGAACGGCTCTACGTCCGGCAAAGTGGACGTGATTAGCTTCAGCAAGGCTCTC 4409 Query 4343 GGCAGTGACGCTGATTCGGCTGGCTCACTGATCCAGCCTATGCAGATCCCAGGCATCATC 4402 ||| | ||| | ||| ||||| | || ||||||| ||||| ||| ||||| || Sbjct 4410 GGCGCAGGCGCCGCTTCTGCTGGTGCGTTGGTCCAGCCCCAGCAGAACCCCGGCATTCTC 4469 Query 4403 ATGCCAGGCCTGCGCCGTCTTACCATTCGTGATCTGCTGGCTCAGGGCCGC---ACTTCC 4459 ||||| ||||||||||| || ||||| ||||| |||||||| || || ||| |||||| Sbjct 4470 ATGCCCGGCCTGCGCCGGCTGACCATCCGTGACCTGCTGGCGCAAGGTCGCACGACTTCC 4529 Query 4460 AGTAACGCTCTGGAATATGTGCGTGAAGAGGTGTTTACCAATAACGCCGACGTGGTGGCA 4519 |||| | || || ||||| || | || || | ||| | ||||| ||| || Sbjct 4530 ---GACGCCATCGAGTACGTGCGCGAGAACGTATTCATCAACAGCGCCGCTCCGGTCGCC 4586 Query 4520 GAGAAAGCACTGAAGCCAGAATCGGATATCACCTTCAGCAAACAAACCGCGAACGTGAAG 4579 ||| | |||||||| || || | | ||||||| ||| |||| || ||||| ||| Sbjct 4587 GAGGGCACGCTGAAGCCCGAGTCCAACCTGACCTTCACCAAGGAAACGGCCAACGTCAAG 4646 Query 4580 ACCATCGCGCACTGGGTGCAGGCATCACGTCAGGTGATGGATGATGCGCCAATGCTTCAG 4639 || | || |||||| | ||||| || || ||| | ||| ||| || || ||||| | Sbjct 4647 ACGCTGGCTCACTGGATTCAGGCTTCTCGCCAGATCATGTCTGACGCTCCGATGCTGGAA 4706 Query 4640 TCCTACATTAACAACCGCCTCATGTACGGCCTGGCACTGAAGGAAGAGGGCCAGCTGCTG 4699 ||||| | ||| ||||| ||| || |||| || ||||| || ||||| || Sbjct 4707 TCCTATGTGAACGGTCGCCTGTTGTTTGGTCTGGACTTGGTCGAAGAAGGGCAGCTTCTC 4766 Query 4700 AACGGCGACGGTACCGGGGATAACCTGGAAGGGCTGAACAAAGTGGCAACCGCCTATGAC 4759 |||||||| || ||||| || |||||| || ||||||||||| || |||||||| ||| Sbjct 4767 AACGGCGATGGCACCGGTGACAACCTGATCGGCCTGAACAAAGTCGCGACCGCCTACGAC 4826 Query 4760 ACCTCGCTGAATGCCACCGGCGACACCCGCGCTGACATTATCGCTCACGCTATTTATCAG 4819 || |||| ||||||||||||||||| ||||||||| || || ||||| || | ||| Sbjct 4827 ACTACGCTCAATGCCACCGGCGACACTCGCGCTGACCAGATTGCACACGCGATCTTCCAG 4886 Query 4820 GTGACCGAGTCTGAGTTCAGCGCTTCCGGTATCGTCCTGAACCCGCGCGACTGGCACAAC 4879 | ||| || |||||| ||||| || | || ||||||| |||||||||||| | Sbjct 4887 ACCAGCGAATCCGAGTTCGAGGCTTCGGGCCTGATCTTGAACCCCCGCGACTGGCACGCC 4946 Query 4880 ATCGCGTTGCTGAAAGACAATGAAGGCCGCTATATCTTCGGTGGTCCTCAGGCATTCACC 4939 |||||| ||||||||||| ||| || || || ||||| || || ||| ||| ||| || Sbjct 4947 ATCGCGCTGCTGAAAGACGGTGATGGTCGTTACATCTTTGGCGGCCCTGCGGCGTTCGCC 5006 Query 4940 AGTAACATCATGTGGGGCTTGCCAGTGGTTCCGACTAAGGCGCAGGCCGCCGGCACCTTT 4999 || |||||||||| | || || ||| | || || || ||||| || || || Sbjct 5007 GCCAAGGTCATGTGGGGGCTTCCTGTTGTTGCCACCAAAGCCCAGGCACAGGGAACTTTC 5066 Query 5000 ACCGTAGGCGGTTTCGATATGGCCTCACAGGTCTGGGATCGCATGGATGCCACCGTGGAA 5059 || || ||||| ||||| ||||| || ||| ||||||| |||||||| || || | || Sbjct 5067 ACTGTTGGCGGCTTCGACATGGCTTCGCAGATCTGGGACCGCATGGACGCGACTATCGAG 5126 Query 5060 GTTAGCCGTGAAGACCGCGATAACTTCGTGAAAAACATGCTGACCATCCTGTGCGAAGAG 5119 | ||| | || ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 5127 ATCAGCAACCAGGATCGCGACAACTTCGTGAAAAACATGCTGACCATCCTGTGCGAAGAG 5186 Query 5120 CGTCTGGCGCTGGCGCATTATCGCCCGACAGCAATCATCAAGGGCACCTTC 5170 || |||||| | | || ||||| || || ||||||||||| ||| | ||| Sbjct 5187 CGCCTGGCGGTTACCCACTATCGTCCTACCGCAATCATCAAAGGCGCTTTC 5237 >seq3087926 Length=6391 Score = 127 bits (140), Expect = 5e-25 Identities = 323/484 (67%), Gaps = 12/484 (2%) Strand=Plus/Minus Query 12684 GATCCGTCGCTGGATGAATGCAATGGCACGCTGACGGCCTGCAAACTCCGATTCGGCGAA 12743 |||||| | |||| | ||||| ||| ||| || ||||||| | ||||||||||| Sbjct 5396 GATCCGGCCAAGGATCAGTGCAAGGGCTGCCTGTCGTCCTGCAAGTTGCGATTCGGCGAG 5337 Query 12744 AATAACGAACTCTCGTTTGGTGGCTTCCCTGGTACGTCGCTGAT---CAGGAGTTGA-TA 12799 || |||||||| || ||||| || ||||| | ||| || || | |||| ||| | Sbjct 5336 AACAACGAACTGTCCTTTGGCGGATTCCCCGCCGTGTCTCTCATTGCCCGGAGCTGACCA 5277 Query 12800 TGCGTCAGAAAACCATCGATGCGATTATGGCGCATGCTGCAGCTGAATATCCTCGTGAGT 12859 |||| || | | ||| | || || ||||||||| || | || ||||| || |||| Sbjct 5276 TGCGCAAGCACATCATTGCGGCCATCCAGGCGCATGCGGCGACGGAGTATCCGCGAGAGT 5217 Query 12860 GTTGCGGCGTGGTGGCGCAAAAGAGCCGGGTAGAGAAATATTTTCCATGTAGTAACCTCG 12919 | |||||| || || | | |||| | |||| || || || || | ||| | | Sbjct 5216 GCTGCGGCCTGCTGTTGGCCGTGGGCCGCGCGCAGAAGTACTTCCCGTGCCGGAACATAG 5157 Query 12920 CTACCGAGCCGACAGAACATTTTCACCTGTCGCCAGAAGACTATGCAGCTGCTGAGGACT 12979 | | ||||||| ||| | || | || || || ||||| || || || || |||| Sbjct 5156 CCAAGGAGCCGAACGAAGAGTTCCGGCTTGACCCCGAGGACTACGCCGCGGCGGAAGACT 5097 Query 12980 GGGGTACGGTGATCGCCATCGTTCACAGTCACCCTGACGCCACAACGCAGCCGAGCGAAC 13039 ||| |||||||| |||||| ||| ||||| |||||||| | |||| | | || Sbjct 5096 TGGGCGAGGTGATCGGCATCGTCCACTCGCACCCGGACGCCACCA-GCAG--GCCCTCAC 5040 Query 13040 TGGATAA---AGCGCAATGCGACGCAACGCTTTTACCCTGGCATATTGTGAGCTGGCCGG 13096 | || | || || || || ||| ||| || ||||| || || ||||| | Sbjct 5039 CGCATGACTTGGCCATGTGTGAGGCCACGGCTTTGCCATGGCACATCCTGTCTTGGCCCG 4980 Query 13097 ATGGGGATTTACGCACCATCCAGCC-GCGCGGAGAACTGCCACTGCTGGAGCGTCCGTTT 13155 | || || | ||||| || ||| ||| | || || ||| ||||| |||| ||||| Sbjct 4979 AGGGTGACTGGCGCACGATTACGCCGGCGGGTAGCAC-GCCGCTGCTCAAGCGCCCGTTC 4921 Query 13156 GTGC 13159 |||| Sbjct 4920 GTGC 4917 >seq3087822 Length=6084 Score = 118 bits (130), Expect = 2e-22 Identities = 229/336 (68%), Gaps = 4/336 (1%) Strand=Plus/Minus Query 12691 CGCTGGATGAATGCAATGGCACGCTGACGGCCTGCAAACTCCGATTCGGCGAAAATAACG 12750 |||| || | ||||| ||| ||| || ||||||| | || ||||||||||| |||| Sbjct 2105 CGCTTGACCAGTGCAAGGGCTGTCTGTCGTCCTGCAAGTTGCGCTTCGGCGAAAACAACG 2046 Query 12751 AACTCTCGTTTGGTGGCTTCCCTGGTACGTCGCTGA---TCAGGAGTTGA-TATGCGTCA 12806 |||| || || ||||| ||||| | || |||| || |||| ||| |||||| | Sbjct 2045 AACTGTCCTTCGGTGGATTCCCCGCCGTTTCCCTGATTGTCCGGAGCTGACTATGCGCAA 1986 Query 12807 GAAAACCATCGATGCGATTATGGCGCATGCTGCAGCTGAATATCCTCGTGAGTGTTGCGG 12866 | | | ||| | || ||| |||||| || || || |||||||| || || || ||||| Sbjct 1985 GCACATCATTGCCGCTATTCAGGCGCACGCGGCGGCGGAATATCCGCGCGAATGCTGCGG 1926 Query 12867 CGTGGTGGCGCAAAAGAGCCGGGTAGAGAAATATTTTCCATGTAGTAACCTCGCTACCGA 12926 || || | | |||| | |||| || || || || | ||| |||| || || Sbjct 1925 GCTGCTGCTGGCCGTGGGCCGCGCTCAGAAGTACTTCCCGTGCCGGAACATCGCCACGGA 1866 Query 12927 GCCGACAGAACATTTTCACCTGTCGCCAGAAGACTATGCAGCTGCTGAGGACTGGGGTAC 12986 ||||| ||| | || | || || || | ||| || || || ||||||| ||| Sbjct 1865 GCCGAGCGAAGAGTTCAAGCTCGATCCCGAGGGCTACGCTGCGGCAGAGGACTTGGGCGA 1806 Query 12987 GGTGATCGCCATCGTTCACAGTCACCCTGACGCCAC 13022 |||||||| || || ||| ||||| ||||| || Sbjct 1805 GGTGATCGGTATAGTCCACTCACACCCGGACGCAAC 1770 >seq3088057 Length=7030 Score = 87.8 bits (96), Expect = 4e-13 Identities = 150/218 (69%), Gaps = 6/218 (3%) Strand=Plus/Plus Query 15409 TTGATAAATGGACGCTTTATCAGGTTGCTCAGTATTGTGATCAGATGGTACCAGACGGCA 15468 ||||| ||| ||||||||| | || || || || ||||||||||| || || || | Sbjct 5724 TTGATCGCTGGTCGCTTTATCGCATCGCGCAATACTGCGATCAGATGGTGCCGGATGGAA 5783 Query 15469 AAGGGGGCAACGGTACAGAACCACGCTATACCTGCAACGTGTACATTCAGGACCGGAACG 15528 |||| ||| | || || |||| |||||||||| ||||| | || | | | || Sbjct 5784 AAGG------CGGCATGGAGCCGCGCTTTACCTGCAACCTGTACCTGCAAAAGCAGGCCG 5837 Query 15529 ACGCCTACACAGTCCTACGTGATTTTGCCGCTATCTTCCGTGGCATGACCTACTGGGGCG 15588 | |||||| | || || | ||| | || | ||||| | || || ||||||||| || Sbjct 5838 AGGCCTACGCGGTGCTGCAGGATCTGGCATCGATCTTTCACGGTCTGGCCTACTGGGACG 5897 Query 15589 GGGATCAGATTGTGGCCCTGGCTGACATGCCGCGCGAT 15626 | ||||| |||| | || || |||||| ||||| Sbjct 5898 GCAGCCAGATCGTGGTCAACGCCGATATGCCGGGCGAT 5935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 112895399542586