Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_016765.1
Length=54024
Score E
Sequences producing significant alignments: (Bits) Value
seq3038812 255 2e-63
seq334436 178 4e-40
seq3082346 145 3e-30
seq108461 138 4e-28
seq3088379 111 5e-20
seq322084 107 6e-19
seq3047186 100 9e-17
seq303408 100 9e-17
seq3087968 95.1 4e-15
seq3083733 95.1 4e-15
seq3087082 86.0 2e-12
seq3023355 84.2 7e-12
seq2686037 84.2 7e-12
seq2645378 84.2 7e-12
seq1087588 84.2 7e-12
seq366846 84.2 7e-12
seq221954 84.2 7e-12
seq2815396 82.4 3e-11
seq3084777 80.6 9e-11
seq3056642 80.6 9e-11
seq1824633 80.6 9e-11
>seq3038812
Length=993
Score = 255 bits (282), Expect = 2e-63
Identities = 325/445 (73%), Gaps = 2/445 (0%)
Strand=Plus/Plus
Query 48620 GGCGCGGAAGGCAATCGCAGACCGCGAGAGGCGAGAGGTCAGGGTTCGGAAGGAGAAGTT 48679
|||||| ||||| | || ||| |||| | || ||| ||| || ||||||||| |
Sbjct 505 GGCGCGCAAGGCGCTGGCCGACATCGAGCGCAAGGACATCAAGGTGCGCAAGGAGAAGCT 564
Query 48680 GAAGAGTCGGTCGGATCACCTGCGCGAGGCTCAGCAGGCGTTCAACGAGTTCATTCGGTG 48739
|||| || || ||| |||||||||| ||||||||||||||||||| ||| ||
Sbjct 565 GAAGTCACGCGGCGACCACATGCGCGAGGCCCAGCAGGCGTTCAACGAGTACATCCGCAC 624
Query 48740 GCGCGACCGCATCGCCGGTCACGCCTGCATCTCCAGCGGCCTGCCCCTGGATTGGTCTGG 48799
|| |||| ||||||| ||| |||||| ||||||||| ||| |||| ||| ||
Sbjct 625 CCGGGACCAGGTCGCCGGCCACCTCTGCATATCCAGCGGCAAGCCATTGGACTGGAGCGG 684
Query 48800 AAAC-CAGACGGATGCCGGGCACTACAGGTCGACCGGAGCCGCGCCGCATCTCCGCTTTA 48858
||| ||| | |||| || || ||| | ||| | || |||||||| |||||
Sbjct 685 CAACGCAGTAG-ATGCAGGTCATTACCGCAGCGTCGGCTCTGCCCCGCATCTGCGCTTCG 743
Query 48859 ACGAGAACAACTGCCACGCCCAGCGGAAGCTGGATAACCGCTATCTCTCCGGCAATGCAG 48918
| ||| |||||||||||| ||| | |||| ||| ||||||| || ||||| ||||| |
Sbjct 744 ATGAGTGCAACTGCCACGCACAGAGCAAGCAGGACAACCGCTTCCTGTCCGGGAATGCCG 803
Query 48919 TGGATTACCGGGTCGGCCTGATCGCTCGGATCGGTCTGGCCGCTGTCGAGGAGTTGGAGG 48978
||||||||||| ||||||||||||| || ||||| | || || ||||| | ||||
Sbjct 804 TGGATTACCGGATCGGCCTGATCGCGCGCATCGGCCAGGAGGCCGTCGACGCCCTGGAAT 863
Query 48979 CGGACAACTCCGTCCGCAAGTACACCGTAGAAGACCTGAAGGCCATCAAGGCCCACTACC 49038
| ||| | ||| |||||||||||||| || || | ||||||||||||||| | ||||
Sbjct 864 CTGACCAGAGCGTTCGCAAGTACACCGTGGATGAGATCAAGGCCATCAAGGCCAAATACC 923
Query 49039 GCGCCAAGGTGCGCGAGCTGAAGAA 49063
| || ||| | |||||||| ||
Sbjct 924 GGGCAAAGACCAGAGAGCTGAAAAA 948
>seq334436
Length=4580
Score = 178 bits (196), Expect = 4e-40
Identities = 597/917 (65%), Gaps = 53/917 (6%)
Strand=Plus/Minus
Query 35439 CGAACTCTCCCCCGATTGCTTGCATGGTGTCCCGGACAGCCACAGCCATGCCTTCATCAG 35498
||||||| ||| ||| | | ||||| || | | | |||| | || || || ||
Sbjct 1255 CGAACTCGCCCTGGATCTCCTCCATGGCGTACTGCAGAGCCTCCTTCAACCCCTCGTCGT 1196
Query 35499 CCGTTTCTGCCAGGGCTGCAAGTTCGAGAAACTGCTCGGTTAGCTTGTAGAGTTGGGTCA 35558
| || || |||| ||| ||||||| | || |||| || ||||||| |||||||
Sbjct 1195 CGGTGTCAGCCATTGCTTGAAGTTCGGCCAGCTTGCCGGTGAGTGTGTAGAGCTGGGTCA 1136
Query 35559 TGCCGCCTTCTCCT---CGGTGAATCGCTTGATCTGCTCGGAGAATTC--GCGAGCAATG 35613
||| || ||||| ||| |||| | ||| ||| | ||| ||||| ||
Sbjct 1135 TGCTGCAGCCTCCTTATCGGC--ATCGGT-GATTCGCTTCCA---TTCCAGCGAG--ATA 1084
Query 35614 CGCTTGACGCCACTATCGTCTTTGCGCGCAGTGAGCTTGCGCACGGCAACGTCGTGGATC 35673
|||| | |||| | ||| |||||| | | || ||||| || |||||||| ||||||
Sbjct 1083 CGCTCGGCGCCCTTGGTGTCCTTGCGCAGAATAAGTTTGCGTACCGCAACGTCATGGATC 1024
Query 35674 TTCTTGAGCTCGTACTGGGACTGGGCGCCTTGCATCGTCTCGATAATCGATTTGATGTAG 35733
|| || ||||| | |||||||||| || |||||| ||||||| |||||||||||||
Sbjct 1023 TTTTTCAGCTCTTGGGGGGACTGGGCTCCGGCCATCGTGTCGATAACCGATTTGATGTAG 964
Query 35734 GCGAGGCGCTCTTCCTTC-GCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGCGAT 35792
| |||||||| | || | | | | | ||
Sbjct 963 TCCAGGCGCTCCTGCTGCTGGCGAGCCCTCTCGGCCTCCTGGTCTTCGGCGTGT-TCAAT 905
Query 35793 CTGCTCCTCTTCACGACGTGCTTCCACATAGTCGCGGTCGTCGAACAAGCCAAGGAAGAT 35852
| |||| || || || | ||||| || |||||| |||| || ||||| |
Sbjct 904 CAGCTCTTCGTCCTTCAGTTGATTGACATACTCCGCGTCGTCAAACATCCCCAGGAACAC 845
Query 35853 GTCCGCACTGAACCCGAGCATCGCAAGAGATTTTTTCACGGCGTCCGTGAGTGATTTTTT 35912
||| || ||||| || ||||| | || ||||| || | ||| || || || || || ||
Sbjct 844 GTCGGCGCTGAAGCCAAGCATAGATAGCGATTTCTTGATGGCATCGGTCAGCGACTTCTT 785
Query 35913 CGGCGCCTCGGTGTCGGTGGTGATTCCCCACTTGGACCGGTAGGAGAACGGCGTGCAACC 35972
|||||||||| ||||| || | || |||| || |||| | | | ||||| ||
Sbjct 784 CGGCGCCTCGCCATCGGTTGTCGTACCGAACTTCGATTTGTAGAGGTAGCGAGTGCAGCC 725
Query 35973 GTATTGCTCTACCTCTCCGCGCTTGCCGTCCAATTCGAACCACAGTTTGATGCGCACGGT 36032
||| ||||| | ||| |||||||||||||||| |||||||| | || | |||
Sbjct 724 GTACTGCTCGATCTCGCCGCGCTTGCCGTCCAGCTCGAACCAGAAGCGAATCTTGATGGT 665
Query 36033 GTGCCCGACTTCGTGACCAATTAGTTCGCTGACCTTCTTGCCTTCAGCATCGTTG---AT 36089
||| | ||| |||| ||| | | || | |||||| || || || ||
Sbjct 664 GTGGTTAAGTTCACGACC---TAGCACCAGGCGTTTGTCGCCTTC-GC--CGCTGGCCAT 611
Query 36090 TTCACGGAAGATCGGGCCGCCCTGGTCAAAGCGCTCCTCGATGACCGTCCAGCCCCACCC 36149
|| | || ||| | ||| || |||||||| ||||||||||| || ||||
Sbjct 610 TT--CTGA----------GCCTTCGTCGAATCGCTCCTCCATGACCGTCCAACCAAACCC 563
Query 36150 GATCCCGACAGGGCCGAACATCTGGGTAGCCTTCATGATCATGTGCTGGCCGCTGATCGA 36209
||| |||||||| ||||| |||| || |||||||||||||| | ||| | |
Sbjct 562 GATGCCGACAGGCCCGAATATCTCCGTGGCCTTCATGATCATCGCCGTACCGTTCAGGCT 503
Query 36210 CGTGATCTGCTGACCATCGACTTTTGC-GCTCTTGGTG--GCCG--ATGGGTCAGTTGCT 36264
||||||| |||||| | || | || ||| |||||| || | || |||| ||||
Sbjct 502 GGTGATCTTCTGACCGCCAACCTCGGCAGCT-TTGGTGTAGCGGGTATCGGTC--GTGCT 446
Query 36265 TGAACCTGATCCCATAGCCGCATGTTTTGGGTATGCATGAGTG-ATCCTCGCCGCGCATG 36323
|||| ||||| | | ||||||| || |||| | | ||||| |||||| |||
Sbjct 445 --GACCTTTTCCCAGATCTGCATGTT---CGTCGACATGGGGGAATCCTTGCCGCG-ATG 392
Query 36324 --CGCAGCCAGTGAAGG 36338
|||||| | ||||||
Sbjct 391 CTCGCAGCGATTGAAGG 375
>seq3082346
Length=2500
Score = 145 bits (160), Expect = 3e-30
Identities = 246/358 (69%), Gaps = 15/358 (4%)
Strand=Plus/Plus
Query 35829 GTCGTCGAACAAGCCAAGGAAGATGTCCGCACTGAACCCGAGCATCGCAAGAGATTTTTT 35888
||| ||||||| || ||||| | ||| || |||||||| ||||||| ||| ||||| ||
Sbjct 1212 GTCATCGAACAGCCCGAGGAACACGTCGGCGCTGAACCCAAGCATCGAAAGCGATTTCTT 1271
Query 35889 CACGGCGTCCGTGAGTGATTTTTTCGGCGCCTCGGTGTCGGTGGTGATTCCCCACTTGGA 35948
| |||||| ||||| |||||||| ||||| ||| ||| ||||| || || | | |
Sbjct 1272 GATGGCGTCGGTGAGCGATTTTTTTGGCGCTTCGCCGTCAGTGGTCATGCCGTAGGTAGT 1331
Query 35949 CCGGTAGGAGAACGGCGTGCAACCGTATTGCTCTACCTCTCCGCGCTTGCCGTCCAATTC 36008
||| | || | ||||| ||||||||||| | ||| || |||| |||||||
Sbjct 1332 TTTGTACTGGTACCGAGTGCAGCCGTATTGCTCGATCTCGCCACGCTGGCCGTCCTGCAT 1391
Query 36009 GAACCACAGTTTGATGCGCACGGTGTGCCCGACTTCGTGACCAATTAGTTCGCTGACCTT 36068
|||||| || || || ||||| || | ||| |||| || | ||| |||
Sbjct 1392 GAACCAGAGCGCAATTTTGACTGTGTGACCAATCTCGCGACCTATGCATGCGC---GCTT 1448
Query 36069 CTTGCCTTCAGCATCGTTGATTTCACGGAAGATCGGGCCGCCCTGGTCAAAGCGCTCCTC 36128
| |||||| | | ||||||| | |||| || |||||||| ||
Sbjct 1449 GTCGCCTTCCCCGATGAAGATTTCATG------------ACCCTCATCGAAGCGCTCTTC 1496
Query 36129 GATGACCGTCCAGCCCCACCCGATCCCGACAGGGCCGAACATCTGGGTAGCCTTCATG 36186
|| | | |||||||||| ||||| ||||| || || |||| || ||| |||||||||
Sbjct 1497 GACAATCCTCCAGCCCCAGCCGATGCCGACCGGACCAAACAACTCGGTGGCCTTCATG 1554
>seq108461
Length=6150
Score = 138 bits (152), Expect = 4e-28
Identities = 102/119 (86%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 38352 CGCACTCCCTCTGCCAACGCCTGCTCTTCGCTGATGTCCTGCAGGCGCTCGACGCGAACA 38411
||||| ||||| ||| ||||| |||||| |||||||||||| ||||||||||| ||
Sbjct 4076 CGCACGCCCTCGGCCTTGGCCTGGTCTTCGGTGATGTCCTGCAACCGCTCGACGCGCACG 4017
Query 38412 GCGGTGATCTCCAGCAGGATGCGGGAGGCCCAGCGGGGCATGTGGATACTTGGCTTCCA 38470
|||||||||||||||||||||||| |||||||||| ||||| |||||||| || ||||
Sbjct 4016 GCGGTGATCTCCAGCAGGATGCGGCAGGCCCAGCGCGGCATATGGATACTGGGGGTCCA 3958
>seq3088379
Length=10556
Score = 111 bits (122), Expect = 5e-20
Identities = 212/310 (68%), Gaps = 12/310 (4%)
Strand=Plus/Plus
Query 590 AAGTTCATGCAGCTCATGCCTCACACCAAAGGCAAATGGAGCGCTTCGAAGTCGAAGCTA 649
||| | |||||||| | || |||||||| ||| | ||| || | ||| ||||
Sbjct 598 AAGCTGATGCAGCTTCTACCGCACACCAAGGGCGAGTGG---GCATTCAAGCGTCAGCTG 654
Query 650 GT---GTTCGAGCCTTGGCAGGTATTCATCGAGGCCAACATCTTCGGCTGGGTGAAGAAG 706
| | |||||||||||||| | || | ||| | ||||||||||| ||||||
Sbjct 655 ATCACGCTCGAGCCTTGGCAGCTTTTTGGCCTAGCCGTGACATTCGGCTGGGTAAAGAAG 714
Query 707 GACACCGGCAAGCGCAGGTTCCGCGAGGCCTACGAAGAGATTCCCAGGAAGAACGGGAAG 766
| ||| | ||| ||||||| || |||| || | ||||| || ||||| ||
Sbjct 715 AAGGGCGGGCACCGCCGGTTCCGTGAAAGCTACTGGGAAGTGCCCAGAAAAAACGGCAAA 774
Query 767 TCGGCCCGTCTTGCCGCACGAG---GCATTTACCTATTCGCCGCAGATGGCGAGTCGGGA 823
|||| | |||||| | | |||| | | |||| ||| |||||||||| ||
Sbjct 775 TCGGT---TGTTGCCGGTGGCGTTGGCATCAGCATGTTCGTCGCCGATGGCGAGTTCGGC 831
Query 824 GCCGAGGTCTACTCCGGCGCCACCACCGAGAAGCAGGCCTTCGAGGTTTTCCGTCCAGCG 883
|||||||| ||| | || || ||||| ||||| ||||||| ||||||||||| || ||
Sbjct 832 GCCGAGGTGTACGCAGGGGCGACCACTGAGAAACAGGCCTGGGAGGTTTTCCGGCCTGCC 891
Query 884 TGGATGATGG 893
| ||||||
Sbjct 892 AAGCTGATGG 901
Score = 96.9 bits (106), Expect = 1e-15
Identities = 109/145 (75%), Gaps = 6/145 (4%)
Strand=Plus/Plus
Query 4872 GCGTCGACTGACCATCCGCGACCTGGTTGCGC---CTGGCACCACTGAGTCGAACTCCGT 4928
||| || ||||||||||| |||||| | |||| | |||| ||| || || || |
Sbjct 4481 GCGCCGGCTGACCATCCGTGACCTGCTGGCGCAAGGTCGCACGACT---TCCGACGCCAT 4537
Query 4929 CGAGTACGTCCGCGAGACCGGCTTCGTCAACAATGCCGCTCCTGTTTCGGAAGGCACCCA 4988
||||||||| ||||||| || ||| |||||| |||||||| || | || ||||| |
Sbjct 4538 CGAGTACGTGCGCGAGAACGTATTCATCAACAGCGCCGCTCCGGTCGCCGAGGGCACGCT 4597
Query 4989 GAAGCCATACTCCGACCTGACCTTC 5013
|||||| | ||| |||||||||||
Sbjct 4598 GAAGCCCGAGTCCAACCTGACCTTC 4622
>seq322084
Length=21621
Score = 107 bits (118), Expect = 6e-19
Identities = 70/77 (91%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 24709 CATGCCCATCACCGAGCAGAAACTGCTGCATATCCTCCCGAACGCCGGCCCTCGAGCCGG 24768
|||||| ||||||||||||||||||||||| ||||||||||||||||||| | ||||||
Sbjct 12999 CATGCCGATCACCGAGCAGAAACTGCTGCAGATCCTCCCGAACGCCGGCCGCCAAGCCGG 13058
Query 24769 CGTTTTTGTTGGTGCGC 24785
|||||||||| |||||
Sbjct 13059 CGTTTTTGTTTCTGCGC 13075
>seq3047186
Length=1103
Score = 100 bits (110), Expect = 9e-17
Identities = 119/159 (75%), Gaps = 2/159 (1%)
Strand=Plus/Plus
Query 45569 CGCCCCGACAAGCGTCCGGTCCTCAGCGACCTGCGCGAGTCCGGCGCCATTGAGCAAGAC 45628
|||||| ||||||| ||||| | |||| |||| || ||||| || || ||||| |||
Sbjct 779 CGCCCCAACAAGCGCCCGGTGAACTCCGACTTGCGTGAATCCGGAGCGATCGAGCAGGAC 838
Query 45629 GCCGACATCGTCATGTTCGTGTACCGCGATGAAGTCTAT-TTCCCGAACAGCGACAGGAA 45687
|||||| | ||||||||||||||||||| || || ||| |||||| | ||| ||
Sbjct 839 GCCGACGTGATCATGTTCGTGTACCGCGACGAGGTGTATCACCCCGAAACGGAACA-CAA 897
Query 45688 GGGTATCGGCGAAATCCTGATCCGGAAGAACCGGGACGG 45726
||| || | ||| ||| | ||| | ||| | ||| ||||
Sbjct 898 GGGCATTGCCGAGATCATCATCGGCAAGCAGCGGAACGG 936
>seq303408
Length=1829
Score = 100 bits (110), Expect = 9e-17
Identities = 274/413 (66%), Gaps = 19/413 (5%)
Strand=Plus/Minus
Query 10213 CGAGTGCGCTACCGCGTTCAACCCCGGTGGCAACCCTGCCGACCAGATCGAAACCACATG 10272
|||| ||| ||| ||||| | || || || || ||||| ||||||||| ||| |
Sbjct 1232 CGAGCACGCCACCTCGTTCGAACCGGGCGGTGCGCCGGCCGAACAGATCGAAGACACCAG 1173
Query 10273 CCTTA--GCGAAACTGTTCGGCGCTACCTGCGCGGCCTGCGCACGCCGGGACAGGCGTCG 10330
||| | || || | || ||||| || |||||||| || || |||
Sbjct 1172 CCTGAATGCCGAAGAG--CGCAGCTACAAAAAGGGTCTGCGCACCCCAGGCACCGCGAGC 1115
Query 10331 CTGACCCTCAACGCTGACCCGCGCAACAGTTCCCATATCCGCCTCTACCAACTGTCCGAG 10390
||| ||| ||||| ||||| |||| ||| |||||||| |||||||||||||
Sbjct 1114 CTGGGCCTGAACGCCGACCCTACCAACGCCAGCCACATCCGCCTGCACCAACTGTCCGAA 1055
Query 10391 TCCGACGACCAGATCGATCAGGACATCGCTTTCGCGGTTGGCTGGTCTGACGGTATTGGC 10450
|| | | | | || | || | | || || |||||||| ||||| | | |
Sbjct 1054 GCCAAGGGTGACACCGG-CGTGAAGTGG-----GCCGTGGGCTGGTCCGACGGCAAGGAC 1001
Query 10451 GTTGCACCAACCGAGGCACAGGACAGCAACGGTGATTGGGATTTCGTTCTTCCGCCGACG 10510
|| || |||| || ||| ||| |||||| || ||| | || ||| ||||
Sbjct 1000 GTACTGCCTACCGT----CA--ACACCAAAGGTGAT--GGCTTT-GAACTGCCGGCGACC 950
Query 10511 CGCACCTGGTTCGTCTTCCGCGGCTATGTGAGCGACTTCCCGTTCGATTTTGCAGCCAAC 10570
|||||||||||| ||| |||||| || |||||||||||| | || ||| |||
Sbjct 949 CGCACCTGGTTCACGTTCGACGGCTACGTCTCGGACTTCCCGTTCAACTTCGCACTGAAC 890
Query 10571 GCTGTGGTGACCTCTACCGCAACCATTCAGCGCTCCGGCGGTTCCGCCTGGAT 10623
|| || |||||| | |||| ||||| || ||| ||||||| |||||||||
Sbjct 889 GCGGTCGTGACCACCACCGTGACCATCCAACGCACCGGCGGCAGCGCCTGGAT 837
>seq3087968
Length=6546
Score = 95.1 bits (104), Expect = 4e-15
Identities = 204/295 (69%), Gaps = 15/295 (5%)
Strand=Plus/Minus
Query 38186 TCATGGTGTCACCCGCTTGAACTCGACGACCCAGACCCAGGGGTTGGCCTGCCAGGCGCC 38245
|||||| |||||||||||||||||||| ||||| ||||| |||||||| | ||| | |
Sbjct 3682 TCATGGCGTCACCCGCTTGAACTCGACCACCCATACCCACGGGTTGGCGTTCCACGACTC 3623
Query 38246 GGCTCCGTTCAACTGCTCCCAGAGGAAGCCGAATGCGCCCTTGGCGGTATCGCCCCAGCA 38305
| ||||| | || ||| || | |||||| || |||| | | || | |
Sbjct 3622 AGTGCCGTTGATGGACTGCCAAAGTCCGGCGAATGTCTCCA--GCGGG-TGGTCCGTGTA 3566
Query 38306 GCCAATGTCCGAGCATGCCTGCCGAG--CGTGGTCGCATGGCTCGCCGCGC---ACTCCC 38360
| || | | | | | || || ||| ||| || || || || || |||
Sbjct 3565 G--AACTTGCCATCCTCAATGTGGAAGCCGTTGTC--ATCGC-CGAAAGGCTGTACGCCC 3511
Query 38361 TCTGCCAACGC-CTGCTCTTCGCTGATGTCCTGCAGGCGCTCGACGCGAACAGCGGTGAT 38419
|| || || || |||||| ||||||| |||||| || |||||||| || |||||||
Sbjct 3510 TCGGC-AAGGCACTGCTCGGTGCTGATGCCCTGCAATCGTTCGACGCGCACGTCGGTGAT 3452
Query 38420 CTCCAGCAGGATGCGGGAGGCCCAGCGGGGCATGTGGATACTTGGCTTCCATTTG 38474
|||||||||||||||| | || |||||||||||| || || || || |||||
Sbjct 3451 CTCCAGCAGGATGCGGCACGCGGCGCGGGGCATGTGAATGCTGGGTTTGTATTTG 3397
>seq3083733
Length=2771
Score = 95.1 bits (104), Expect = 4e-15
Identities = 67/77 (87%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 24709 CATGCCCATCACCGAGCAGAAACTGCTGCATATCCTCCCGAACGCCGGCCCTCGAGCCGG 24768
|||||| |||||||||||| | ||||||| ||||||||||||||||||| | ||||||
Sbjct 2686 CATGCCGATCACCGAGCAGCAGTTGCTGCAGATCCTCCCGAACGCCGGCCGCCAAGCCGG 2745
Query 24769 CGTTTTTGTTGGTGCGC 24785
|||||||||| |||||
Sbjct 2746 CGTTTTTGTTTCTGCGC 2762
>seq3087082
Length=4623
Score = 86.0 bits (94), Expect = 2e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 24707 GCCATGCCCATCACCGAGCAGAAACTGCTGCATATCCTCCCGAACGCCGGCCCTCGAGCC 24766
|| ||||||||||| |||||| | ||||||| ||||||||||||||||||| | ||||
Sbjct 3797 GCTATGCCCATCACTGAGCAGCAGTTGCTGCAGATCCTCCCGAACGCCGGCCGCCAAGCC 3856
Query 24767 GGCGTTTTTGTT 24778
|||||||| |||
Sbjct 3857 GGCGTTTTCGTT 3868
>seq3023355
Length=832
Score = 84.2 bits (92), Expect = 7e-12
Identities = 137/196 (70%), Gaps = 6/196 (3%)
Strand=Plus/Plus
Query 45544 CCAGCTCAACCGAGGTTGC---GAGTCTCGCCCCGACAAGCGTCCGGTCCTCAGCGACCT 45600
|||||||||||| || | ||| || || ||||||| ||||| | |||| |
Sbjct 634 CCAGCTCAACCG---TTCCCTGGAGCAACGGCCGAACAAGCGCCCGGTGAACTCCGACTT 690
Query 45601 GCGCGAGTCCGGCGCCATTGAGCAAGACGCCGACATCGTCATGTTCGTGTACCGCGATGA 45660
||| || ||||| || || ||||| || |||||| | ||||||||||||||||||| ||
Sbjct 691 GCGGGAATCCGGAGCGATCGAGCAGGATGCCGACGTGATCATGTTCGTGTACCGCGACGA 750
Query 45661 AGTCTATTTCCCGAACAGCGACAGGAAGGGTATCGGCGAAATCCTGATCCGGAAGAACCG 45720
|| ||| ||| | | || || || || | ||| ||| | ||| | ||| | ||
Sbjct 751 GGTGTATCACCCCGAGACGGAGCACAAAGGCATTGCCGAGATCATCATCGGCAAGCAGCG 810
Query 45721 GGACGGAGAGATCGGC 45736
| |||| |||||||
Sbjct 811 GAACGGGCCGATCGGC 826
>seq2686037
Length=194
Score = 84.2 bits (92), Expect = 7e-12
Identities = 54/59 (92%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 27080 ACAGGATTTAGGTTCCAGCGCCGCAAGGCGTGAGAGTTCGAGTCTCTCCGTCCGCACCA 27138
|| ||||||||||||||||||||| |||||| ||||||||||||||| | |||||||||
Sbjct 191 ACTGGATTTAGGTTCCAGCGCCGCGAGGCGTAAGAGTTCGAGTCTCTTCATCCGCACCA 133
>seq2645378
Length=187
Score = 84.2 bits (92), Expect = 7e-12
Identities = 52/56 (93%), Gaps = 0/56 (0%)
Strand=Plus/Plus
Query 27083 GGATTTAGGTTCCAGCGCCGCAAGGCGTGAGAGTTCGAGTCTCTCCGTCCGCACCA 27138
||||||||||||||||||||| |||||| ||||||||||||||| | |||||||||
Sbjct 2 GGATTTAGGTTCCAGCGCCGCGAGGCGTAAGAGTTCGAGTCTCTTCATCCGCACCA 57
>seq1087588
Length=116
Score = 84.2 bits (92), Expect = 7e-12
Identities = 54/59 (92%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 27080 ACAGGATTTAGGTTCCAGCGCCGCAAGGCGTGAGAGTTCGAGTCTCTCCGTCCGCACCA 27138
|| ||||||||||||||||||||| |||||| ||||||||||||||| | |||||||||
Sbjct 60 ACTGGATTTAGGTTCCAGCGCCGCGAGGCGTAAGAGTTCGAGTCTCTTCATCCGCACCA 2
>seq366846
Length=1509
Score = 84.2 bits (92), Expect = 7e-12
Identities = 114/159 (72%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 45569 CGCCCCGACAAGCGTCCGGTCCTCAGCGACCTGCGCGAGTCCGGCGCCATTGAGCAAGAC 45628
||||| ||||||| ||||| | |||| |||| || ||||| || || ||||| ||
Sbjct 417 CGCCCGAACAAGCGCCCGGTGAACTCCGACTTGCGTGAATCCGGAGCGATCGAGCAGGAT 358
Query 45629 GCCGACATCGTCATGTTCGTGTACCGCGATGAAGTCTATTTCCCGAACAGCGACAGGAAG 45688
|| ||| | ||||||||||||||||||| || || ||| ||| | | || ||
Sbjct 357 GCTGACGTGATCATGTTCGTGTACCGCGACGAGGTGTATCACCCCGAGACGGAACACAAA 298
Query 45689 GGTATCGGCGAAATCCTGATCCGGAAGAACCGGGACGGA 45727
|| || | ||||||| | ||| | ||| | ||| |||||
Sbjct 297 GGCATTGCCGAAATCATCATCGGCAAGCAGCGGAACGGA 259
>seq221954
Length=357
Score = 84.2 bits (92), Expect = 7e-12
Identities = 52/56 (93%), Gaps = 0/56 (0%)
Strand=Plus/Minus
Query 27083 GGATTTAGGTTCCAGCGCCGCAAGGCGTGAGAGTTCGAGTCTCTCCGTCCGCACCA 27138
||||||||||||||||||||| |||||| ||||||||||||||| | |||||||||
Sbjct 356 GGATTTAGGTTCCAGCGCCGCGAGGCGTAAGAGTTCGAGTCTCTTCATCCGCACCA 301
>seq2815396
Length=244
Score = 82.4 bits (90), Expect = 3e-11
Identities = 121/169 (72%), Gaps = 2/169 (1%)
Strand=Plus/Minus
Query 45569 CGCCCCGACAAGCGTCCGGTCCTCAGCGACCTGCGCGAGTCCGGCGCCATTGAGCAAGAC 45628
|| ||| ||||||| ||||| | |||||||||||| ||||| || || ||||| ||
Sbjct 180 CGTCCCAACAAGCGCCCGGTGAACTCCGACCTGCGCGAATCCGGAGCGATCGAGCAGGAT 121
Query 45629 GCCGACATCGTCATGTTCGTGTACCGCGATGAAGTCTA-TTTCCCGAACAGCGACAGGAA 45687
|| ||| | ||||||| |||||||| || || || || |||||| | ||| ||
Sbjct 120 GCTGACGTGATCATGTTTGTGTACCGGGACGAGGTGTACCACCCCGAAACGGAACA-TAA 62
Query 45688 GGGTATCGGCGAAATCCTGATCCGGAAGAACCGGGACGGAGAGATCGGC 45736
|| || | ||| ||| | ||| | ||| | ||| |||| |||||||
Sbjct 61 AGGCATTGCCGAGATCATCATCGGCAAGCAGCGGAACGGGCCGATCGGC 13
>seq3084777
Length=3074
Score = 80.6 bits (88), Expect = 9e-11
Identities = 125/179 (70%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 32244 AGGACATATCGGGCACCACACTGCGGGCAGGCTGCGGCCATGCAATTCTCCCTCTGGCAA 32303
|| ||||| || || || || | ||||| || || |||||||| || ||| | ||
Sbjct 1652 AGCACATAGCGAGCCCCGCATTTTGGGCATGCAGCTGCCATGCAGTTTTCCGAATCACAG 1711
Query 32304 CCAGGGCACTTGTCCTCTTCCGGCTCTGGTCCGGCCCAATCGCATTCGTGGCAGGCAGCC 32363
|| ||||||||||||||| || || || || ||| ||||| || |||||||| |
Sbjct 1712 CCTGGGCACTTGTCCTCTATTGGTTCAGGGCCTTGCCATTCGCAATCATGGCAGGCGCCA 1771
Query 32364 ACGCCCGTGGCGGAATCGTTGATCCCGCCATGCTGGCACTCGTCGCATCGCCTGGCCTC 32422
| |||| | ||||| || || ||| |||| | ||| | ||||| | | ||||||
Sbjct 1772 ATGCCCACTCCAGAATCATTAATTCCGACATGGTTGCAGTTATCGCACTGGCGGGCCTC 1830
>seq3056642
Length=1263
Score = 80.6 bits (88), Expect = 9e-11
Identities = 61/72 (85%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 24707 GCCATGCCCATCACCGAGCAGAAACTGCTGCATATCCTCCCGAACGCCGGCCCTCGAGCC 24766
|||||||| |||||||||||| | ||||||| || |||||||||||||||| |||
Sbjct 72 GCCATGCCTATCACCGAGCAGCAGTTGCTGCAGATACTCCCGAACGCCGGCCGCAATGCC 13
Query 24767 GGCGTTTTTGTT 24778
||||||||||||
Sbjct 12 GGCGTTTTTGTT 1
>seq1824633
Length=127
Score = 80.6 bits (88), Expect = 9e-11
Identities = 59/69 (86%), Gaps = 0/69 (0%)
Strand=Plus/Plus
Query 24710 ATGCCCATCACCGAGCAGAAACTGCTGCATATCCTCCCGAACGCCGGCCCTCGAGCCGGC 24769
||||| |||||||||||| | ||||||| ||||||||||||||||||| ||||||
Sbjct 32 ATGCCGATCACCGAGCAGCAGTTGCTGCAGATCCTCCCGAACGCCGGCCGCAATGCCGGC 91
Query 24770 GTTTTTGTT 24778
|||||||||
Sbjct 92 GTTTTTGTT 100
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 166419218515852
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |