Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09] 3,088,511 sequences; 2,785,377,831 total letters Query= NC_016765.1 Length=54024 Score E Sequences producing significant alignments: (Bits) Value seq3038812 255 2e-63 seq334436 178 4e-40 seq3082346 145 3e-30 seq108461 138 4e-28 seq3088379 111 5e-20 seq322084 107 6e-19 seq3047186 100 9e-17 seq303408 100 9e-17 seq3087968 95.1 4e-15 seq3083733 95.1 4e-15 seq3087082 86.0 2e-12 seq3023355 84.2 7e-12 seq2686037 84.2 7e-12 seq2645378 84.2 7e-12 seq1087588 84.2 7e-12 seq366846 84.2 7e-12 seq221954 84.2 7e-12 seq2815396 82.4 3e-11 seq3084777 80.6 9e-11 seq3056642 80.6 9e-11 seq1824633 80.6 9e-11 >seq3038812 Length=993 Score = 255 bits (282), Expect = 2e-63 Identities = 325/445 (73%), Gaps = 2/445 (0%) Strand=Plus/Plus Query 48620 GGCGCGGAAGGCAATCGCAGACCGCGAGAGGCGAGAGGTCAGGGTTCGGAAGGAGAAGTT 48679 |||||| ||||| | || ||| |||| | || ||| ||| || ||||||||| | Sbjct 505 GGCGCGCAAGGCGCTGGCCGACATCGAGCGCAAGGACATCAAGGTGCGCAAGGAGAAGCT 564 Query 48680 GAAGAGTCGGTCGGATCACCTGCGCGAGGCTCAGCAGGCGTTCAACGAGTTCATTCGGTG 48739 |||| || || ||| |||||||||| ||||||||||||||||||| ||| || Sbjct 565 GAAGTCACGCGGCGACCACATGCGCGAGGCCCAGCAGGCGTTCAACGAGTACATCCGCAC 624 Query 48740 GCGCGACCGCATCGCCGGTCACGCCTGCATCTCCAGCGGCCTGCCCCTGGATTGGTCTGG 48799 || |||| ||||||| ||| |||||| ||||||||| ||| |||| ||| || Sbjct 625 CCGGGACCAGGTCGCCGGCCACCTCTGCATATCCAGCGGCAAGCCATTGGACTGGAGCGG 684 Query 48800 AAAC-CAGACGGATGCCGGGCACTACAGGTCGACCGGAGCCGCGCCGCATCTCCGCTTTA 48858 ||| ||| | |||| || || ||| | ||| | || |||||||| ||||| Sbjct 685 CAACGCAGTAG-ATGCAGGTCATTACCGCAGCGTCGGCTCTGCCCCGCATCTGCGCTTCG 743 Query 48859 ACGAGAACAACTGCCACGCCCAGCGGAAGCTGGATAACCGCTATCTCTCCGGCAATGCAG 48918 | ||| |||||||||||| ||| | |||| ||| ||||||| || ||||| ||||| | Sbjct 744 ATGAGTGCAACTGCCACGCACAGAGCAAGCAGGACAACCGCTTCCTGTCCGGGAATGCCG 803 Query 48919 TGGATTACCGGGTCGGCCTGATCGCTCGGATCGGTCTGGCCGCTGTCGAGGAGTTGGAGG 48978 ||||||||||| ||||||||||||| || ||||| | || || ||||| | |||| Sbjct 804 TGGATTACCGGATCGGCCTGATCGCGCGCATCGGCCAGGAGGCCGTCGACGCCCTGGAAT 863 Query 48979 CGGACAACTCCGTCCGCAAGTACACCGTAGAAGACCTGAAGGCCATCAAGGCCCACTACC 49038 | ||| | ||| |||||||||||||| || || | ||||||||||||||| | |||| Sbjct 864 CTGACCAGAGCGTTCGCAAGTACACCGTGGATGAGATCAAGGCCATCAAGGCCAAATACC 923 Query 49039 GCGCCAAGGTGCGCGAGCTGAAGAA 49063 | || ||| | |||||||| || Sbjct 924 GGGCAAAGACCAGAGAGCTGAAAAA 948 >seq334436 Length=4580 Score = 178 bits (196), Expect = 4e-40 Identities = 597/917 (65%), Gaps = 53/917 (6%) Strand=Plus/Minus Query 35439 CGAACTCTCCCCCGATTGCTTGCATGGTGTCCCGGACAGCCACAGCCATGCCTTCATCAG 35498 ||||||| ||| ||| | | ||||| || | | | |||| | || || || || Sbjct 1255 CGAACTCGCCCTGGATCTCCTCCATGGCGTACTGCAGAGCCTCCTTCAACCCCTCGTCGT 1196 Query 35499 CCGTTTCTGCCAGGGCTGCAAGTTCGAGAAACTGCTCGGTTAGCTTGTAGAGTTGGGTCA 35558 | || || |||| ||| ||||||| | || |||| || ||||||| ||||||| Sbjct 1195 CGGTGTCAGCCATTGCTTGAAGTTCGGCCAGCTTGCCGGTGAGTGTGTAGAGCTGGGTCA 1136 Query 35559 TGCCGCCTTCTCCT---CGGTGAATCGCTTGATCTGCTCGGAGAATTC--GCGAGCAATG 35613 ||| || ||||| ||| |||| | ||| ||| | ||| ||||| || Sbjct 1135 TGCTGCAGCCTCCTTATCGGC--ATCGGT-GATTCGCTTCCA---TTCCAGCGAG--ATA 1084 Query 35614 CGCTTGACGCCACTATCGTCTTTGCGCGCAGTGAGCTTGCGCACGGCAACGTCGTGGATC 35673 |||| | |||| | ||| |||||| | | || ||||| || |||||||| |||||| Sbjct 1083 CGCTCGGCGCCCTTGGTGTCCTTGCGCAGAATAAGTTTGCGTACCGCAACGTCATGGATC 1024 Query 35674 TTCTTGAGCTCGTACTGGGACTGGGCGCCTTGCATCGTCTCGATAATCGATTTGATGTAG 35733 || || ||||| | |||||||||| || |||||| ||||||| ||||||||||||| Sbjct 1023 TTTTTCAGCTCTTGGGGGGACTGGGCTCCGGCCATCGTGTCGATAACCGATTTGATGTAG 964 Query 35734 GCGAGGCGCTCTTCCTTC-GCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGCGAT 35792 | |||||||| | || | | | | | || Sbjct 963 TCCAGGCGCTCCTGCTGCTGGCGAGCCCTCTCGGCCTCCTGGTCTTCGGCGTGT-TCAAT 905 Query 35793 CTGCTCCTCTTCACGACGTGCTTCCACATAGTCGCGGTCGTCGAACAAGCCAAGGAAGAT 35852 | |||| || || || | ||||| || |||||| |||| || ||||| | Sbjct 904 CAGCTCTTCGTCCTTCAGTTGATTGACATACTCCGCGTCGTCAAACATCCCCAGGAACAC 845 Query 35853 GTCCGCACTGAACCCGAGCATCGCAAGAGATTTTTTCACGGCGTCCGTGAGTGATTTTTT 35912 ||| || ||||| || ||||| | || ||||| || | ||| || || || || || || Sbjct 844 GTCGGCGCTGAAGCCAAGCATAGATAGCGATTTCTTGATGGCATCGGTCAGCGACTTCTT 785 Query 35913 CGGCGCCTCGGTGTCGGTGGTGATTCCCCACTTGGACCGGTAGGAGAACGGCGTGCAACC 35972 |||||||||| ||||| || | || |||| || |||| | | | ||||| || Sbjct 784 CGGCGCCTCGCCATCGGTTGTCGTACCGAACTTCGATTTGTAGAGGTAGCGAGTGCAGCC 725 Query 35973 GTATTGCTCTACCTCTCCGCGCTTGCCGTCCAATTCGAACCACAGTTTGATGCGCACGGT 36032 ||| ||||| | ||| |||||||||||||||| |||||||| | || | ||| Sbjct 724 GTACTGCTCGATCTCGCCGCGCTTGCCGTCCAGCTCGAACCAGAAGCGAATCTTGATGGT 665 Query 36033 GTGCCCGACTTCGTGACCAATTAGTTCGCTGACCTTCTTGCCTTCAGCATCGTTG---AT 36089 ||| | ||| |||| ||| | | || | |||||| || || || || Sbjct 664 GTGGTTAAGTTCACGACC---TAGCACCAGGCGTTTGTCGCCTTC-GC--CGCTGGCCAT 611 Query 36090 TTCACGGAAGATCGGGCCGCCCTGGTCAAAGCGCTCCTCGATGACCGTCCAGCCCCACCC 36149 || | || ||| | ||| || |||||||| ||||||||||| || |||| Sbjct 610 TT--CTGA----------GCCTTCGTCGAATCGCTCCTCCATGACCGTCCAACCAAACCC 563 Query 36150 GATCCCGACAGGGCCGAACATCTGGGTAGCCTTCATGATCATGTGCTGGCCGCTGATCGA 36209 ||| |||||||| ||||| |||| || |||||||||||||| | ||| | | Sbjct 562 GATGCCGACAGGCCCGAATATCTCCGTGGCCTTCATGATCATCGCCGTACCGTTCAGGCT 503 Query 36210 CGTGATCTGCTGACCATCGACTTTTGC-GCTCTTGGTG--GCCG--ATGGGTCAGTTGCT 36264 ||||||| |||||| | || | || ||| |||||| || | || |||| |||| Sbjct 502 GGTGATCTTCTGACCGCCAACCTCGGCAGCT-TTGGTGTAGCGGGTATCGGTC--GTGCT 446 Query 36265 TGAACCTGATCCCATAGCCGCATGTTTTGGGTATGCATGAGTG-ATCCTCGCCGCGCATG 36323 |||| ||||| | | ||||||| || |||| | | ||||| |||||| ||| Sbjct 445 --GACCTTTTCCCAGATCTGCATGTT---CGTCGACATGGGGGAATCCTTGCCGCG-ATG 392 Query 36324 --CGCAGCCAGTGAAGG 36338 |||||| | |||||| Sbjct 391 CTCGCAGCGATTGAAGG 375 >seq3082346 Length=2500 Score = 145 bits (160), Expect = 3e-30 Identities = 246/358 (69%), Gaps = 15/358 (4%) Strand=Plus/Plus Query 35829 GTCGTCGAACAAGCCAAGGAAGATGTCCGCACTGAACCCGAGCATCGCAAGAGATTTTTT 35888 ||| ||||||| || ||||| | ||| || |||||||| ||||||| ||| ||||| || Sbjct 1212 GTCATCGAACAGCCCGAGGAACACGTCGGCGCTGAACCCAAGCATCGAAAGCGATTTCTT 1271 Query 35889 CACGGCGTCCGTGAGTGATTTTTTCGGCGCCTCGGTGTCGGTGGTGATTCCCCACTTGGA 35948 | |||||| ||||| |||||||| ||||| ||| ||| ||||| || || | | | Sbjct 1272 GATGGCGTCGGTGAGCGATTTTTTTGGCGCTTCGCCGTCAGTGGTCATGCCGTAGGTAGT 1331 Query 35949 CCGGTAGGAGAACGGCGTGCAACCGTATTGCTCTACCTCTCCGCGCTTGCCGTCCAATTC 36008 ||| | || | ||||| ||||||||||| | ||| || |||| ||||||| Sbjct 1332 TTTGTACTGGTACCGAGTGCAGCCGTATTGCTCGATCTCGCCACGCTGGCCGTCCTGCAT 1391 Query 36009 GAACCACAGTTTGATGCGCACGGTGTGCCCGACTTCGTGACCAATTAGTTCGCTGACCTT 36068 |||||| || || || ||||| || | ||| |||| || | ||| ||| Sbjct 1392 GAACCAGAGCGCAATTTTGACTGTGTGACCAATCTCGCGACCTATGCATGCGC---GCTT 1448 Query 36069 CTTGCCTTCAGCATCGTTGATTTCACGGAAGATCGGGCCGCCCTGGTCAAAGCGCTCCTC 36128 | |||||| | | ||||||| | |||| || |||||||| || Sbjct 1449 GTCGCCTTCCCCGATGAAGATTTCATG------------ACCCTCATCGAAGCGCTCTTC 1496 Query 36129 GATGACCGTCCAGCCCCACCCGATCCCGACAGGGCCGAACATCTGGGTAGCCTTCATG 36186 || | | |||||||||| ||||| ||||| || || |||| || ||| ||||||||| Sbjct 1497 GACAATCCTCCAGCCCCAGCCGATGCCGACCGGACCAAACAACTCGGTGGCCTTCATG 1554 >seq108461 Length=6150 Score = 138 bits (152), Expect = 4e-28 Identities = 102/119 (86%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 38352 CGCACTCCCTCTGCCAACGCCTGCTCTTCGCTGATGTCCTGCAGGCGCTCGACGCGAACA 38411 ||||| ||||| ||| ||||| |||||| |||||||||||| ||||||||||| || Sbjct 4076 CGCACGCCCTCGGCCTTGGCCTGGTCTTCGGTGATGTCCTGCAACCGCTCGACGCGCACG 4017 Query 38412 GCGGTGATCTCCAGCAGGATGCGGGAGGCCCAGCGGGGCATGTGGATACTTGGCTTCCA 38470 |||||||||||||||||||||||| |||||||||| ||||| |||||||| || |||| Sbjct 4016 GCGGTGATCTCCAGCAGGATGCGGCAGGCCCAGCGCGGCATATGGATACTGGGGGTCCA 3958 >seq3088379 Length=10556 Score = 111 bits (122), Expect = 5e-20 Identities = 212/310 (68%), Gaps = 12/310 (4%) Strand=Plus/Plus Query 590 AAGTTCATGCAGCTCATGCCTCACACCAAAGGCAAATGGAGCGCTTCGAAGTCGAAGCTA 649 ||| | |||||||| | || |||||||| ||| | ||| || | ||| |||| Sbjct 598 AAGCTGATGCAGCTTCTACCGCACACCAAGGGCGAGTGG---GCATTCAAGCGTCAGCTG 654 Query 650 GT---GTTCGAGCCTTGGCAGGTATTCATCGAGGCCAACATCTTCGGCTGGGTGAAGAAG 706 | | |||||||||||||| | || | ||| | ||||||||||| |||||| Sbjct 655 ATCACGCTCGAGCCTTGGCAGCTTTTTGGCCTAGCCGTGACATTCGGCTGGGTAAAGAAG 714 Query 707 GACACCGGCAAGCGCAGGTTCCGCGAGGCCTACGAAGAGATTCCCAGGAAGAACGGGAAG 766 | ||| | ||| ||||||| || |||| || | ||||| || ||||| || Sbjct 715 AAGGGCGGGCACCGCCGGTTCCGTGAAAGCTACTGGGAAGTGCCCAGAAAAAACGGCAAA 774 Query 767 TCGGCCCGTCTTGCCGCACGAG---GCATTTACCTATTCGCCGCAGATGGCGAGTCGGGA 823 |||| | |||||| | | |||| | | |||| ||| |||||||||| || Sbjct 775 TCGGT---TGTTGCCGGTGGCGTTGGCATCAGCATGTTCGTCGCCGATGGCGAGTTCGGC 831 Query 824 GCCGAGGTCTACTCCGGCGCCACCACCGAGAAGCAGGCCTTCGAGGTTTTCCGTCCAGCG 883 |||||||| ||| | || || ||||| ||||| ||||||| ||||||||||| || || Sbjct 832 GCCGAGGTGTACGCAGGGGCGACCACTGAGAAACAGGCCTGGGAGGTTTTCCGGCCTGCC 891 Query 884 TGGATGATGG 893 | |||||| Sbjct 892 AAGCTGATGG 901 Score = 96.9 bits (106), Expect = 1e-15 Identities = 109/145 (75%), Gaps = 6/145 (4%) Strand=Plus/Plus Query 4872 GCGTCGACTGACCATCCGCGACCTGGTTGCGC---CTGGCACCACTGAGTCGAACTCCGT 4928 ||| || ||||||||||| |||||| | |||| | |||| ||| || || || | Sbjct 4481 GCGCCGGCTGACCATCCGTGACCTGCTGGCGCAAGGTCGCACGACT---TCCGACGCCAT 4537 Query 4929 CGAGTACGTCCGCGAGACCGGCTTCGTCAACAATGCCGCTCCTGTTTCGGAAGGCACCCA 4988 ||||||||| ||||||| || ||| |||||| |||||||| || | || ||||| | Sbjct 4538 CGAGTACGTGCGCGAGAACGTATTCATCAACAGCGCCGCTCCGGTCGCCGAGGGCACGCT 4597 Query 4989 GAAGCCATACTCCGACCTGACCTTC 5013 |||||| | ||| ||||||||||| Sbjct 4598 GAAGCCCGAGTCCAACCTGACCTTC 4622 >seq322084 Length=21621 Score = 107 bits (118), Expect = 6e-19 Identities = 70/77 (91%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 24709 CATGCCCATCACCGAGCAGAAACTGCTGCATATCCTCCCGAACGCCGGCCCTCGAGCCGG 24768 |||||| ||||||||||||||||||||||| ||||||||||||||||||| | |||||| Sbjct 12999 CATGCCGATCACCGAGCAGAAACTGCTGCAGATCCTCCCGAACGCCGGCCGCCAAGCCGG 13058 Query 24769 CGTTTTTGTTGGTGCGC 24785 |||||||||| ||||| Sbjct 13059 CGTTTTTGTTTCTGCGC 13075 >seq3047186 Length=1103 Score = 100 bits (110), Expect = 9e-17 Identities = 119/159 (75%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 45569 CGCCCCGACAAGCGTCCGGTCCTCAGCGACCTGCGCGAGTCCGGCGCCATTGAGCAAGAC 45628 |||||| ||||||| ||||| | |||| |||| || ||||| || || ||||| ||| Sbjct 779 CGCCCCAACAAGCGCCCGGTGAACTCCGACTTGCGTGAATCCGGAGCGATCGAGCAGGAC 838 Query 45629 GCCGACATCGTCATGTTCGTGTACCGCGATGAAGTCTAT-TTCCCGAACAGCGACAGGAA 45687 |||||| | ||||||||||||||||||| || || ||| |||||| | ||| || Sbjct 839 GCCGACGTGATCATGTTCGTGTACCGCGACGAGGTGTATCACCCCGAAACGGAACA-CAA 897 Query 45688 GGGTATCGGCGAAATCCTGATCCGGAAGAACCGGGACGG 45726 ||| || | ||| ||| | ||| | ||| | ||| |||| Sbjct 898 GGGCATTGCCGAGATCATCATCGGCAAGCAGCGGAACGG 936 >seq303408 Length=1829 Score = 100 bits (110), Expect = 9e-17 Identities = 274/413 (66%), Gaps = 19/413 (5%) Strand=Plus/Minus Query 10213 CGAGTGCGCTACCGCGTTCAACCCCGGTGGCAACCCTGCCGACCAGATCGAAACCACATG 10272 |||| ||| ||| ||||| | || || || || ||||| ||||||||| ||| | Sbjct 1232 CGAGCACGCCACCTCGTTCGAACCGGGCGGTGCGCCGGCCGAACAGATCGAAGACACCAG 1173 Query 10273 CCTTA--GCGAAACTGTTCGGCGCTACCTGCGCGGCCTGCGCACGCCGGGACAGGCGTCG 10330 ||| | || || | || ||||| || |||||||| || || ||| Sbjct 1172 CCTGAATGCCGAAGAG--CGCAGCTACAAAAAGGGTCTGCGCACCCCAGGCACCGCGAGC 1115 Query 10331 CTGACCCTCAACGCTGACCCGCGCAACAGTTCCCATATCCGCCTCTACCAACTGTCCGAG 10390 ||| ||| ||||| ||||| |||| ||| |||||||| ||||||||||||| Sbjct 1114 CTGGGCCTGAACGCCGACCCTACCAACGCCAGCCACATCCGCCTGCACCAACTGTCCGAA 1055 Query 10391 TCCGACGACCAGATCGATCAGGACATCGCTTTCGCGGTTGGCTGGTCTGACGGTATTGGC 10450 || | | | | || | || | | || || |||||||| ||||| | | | Sbjct 1054 GCCAAGGGTGACACCGG-CGTGAAGTGG-----GCCGTGGGCTGGTCCGACGGCAAGGAC 1001 Query 10451 GTTGCACCAACCGAGGCACAGGACAGCAACGGTGATTGGGATTTCGTTCTTCCGCCGACG 10510 || || |||| || ||| ||| |||||| || ||| | || ||| |||| Sbjct 1000 GTACTGCCTACCGT----CA--ACACCAAAGGTGAT--GGCTTT-GAACTGCCGGCGACC 950 Query 10511 CGCACCTGGTTCGTCTTCCGCGGCTATGTGAGCGACTTCCCGTTCGATTTTGCAGCCAAC 10570 |||||||||||| ||| |||||| || |||||||||||| | || ||| ||| Sbjct 949 CGCACCTGGTTCACGTTCGACGGCTACGTCTCGGACTTCCCGTTCAACTTCGCACTGAAC 890 Query 10571 GCTGTGGTGACCTCTACCGCAACCATTCAGCGCTCCGGCGGTTCCGCCTGGAT 10623 || || |||||| | |||| ||||| || ||| ||||||| ||||||||| Sbjct 889 GCGGTCGTGACCACCACCGTGACCATCCAACGCACCGGCGGCAGCGCCTGGAT 837 >seq3087968 Length=6546 Score = 95.1 bits (104), Expect = 4e-15 Identities = 204/295 (69%), Gaps = 15/295 (5%) Strand=Plus/Minus Query 38186 TCATGGTGTCACCCGCTTGAACTCGACGACCCAGACCCAGGGGTTGGCCTGCCAGGCGCC 38245 |||||| |||||||||||||||||||| ||||| ||||| |||||||| | ||| | | Sbjct 3682 TCATGGCGTCACCCGCTTGAACTCGACCACCCATACCCACGGGTTGGCGTTCCACGACTC 3623 Query 38246 GGCTCCGTTCAACTGCTCCCAGAGGAAGCCGAATGCGCCCTTGGCGGTATCGCCCCAGCA 38305 | ||||| | || ||| || | |||||| || |||| | | || | | Sbjct 3622 AGTGCCGTTGATGGACTGCCAAAGTCCGGCGAATGTCTCCA--GCGGG-TGGTCCGTGTA 3566 Query 38306 GCCAATGTCCGAGCATGCCTGCCGAG--CGTGGTCGCATGGCTCGCCGCGC---ACTCCC 38360 | || | | | | | || || ||| ||| || || || || || ||| Sbjct 3565 G--AACTTGCCATCCTCAATGTGGAAGCCGTTGTC--ATCGC-CGAAAGGCTGTACGCCC 3511 Query 38361 TCTGCCAACGC-CTGCTCTTCGCTGATGTCCTGCAGGCGCTCGACGCGAACAGCGGTGAT 38419 || || || || |||||| ||||||| |||||| || |||||||| || ||||||| Sbjct 3510 TCGGC-AAGGCACTGCTCGGTGCTGATGCCCTGCAATCGTTCGACGCGCACGTCGGTGAT 3452 Query 38420 CTCCAGCAGGATGCGGGAGGCCCAGCGGGGCATGTGGATACTTGGCTTCCATTTG 38474 |||||||||||||||| | || |||||||||||| || || || || ||||| Sbjct 3451 CTCCAGCAGGATGCGGCACGCGGCGCGGGGCATGTGAATGCTGGGTTTGTATTTG 3397 >seq3083733 Length=2771 Score = 95.1 bits (104), Expect = 4e-15 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 24709 CATGCCCATCACCGAGCAGAAACTGCTGCATATCCTCCCGAACGCCGGCCCTCGAGCCGG 24768 |||||| |||||||||||| | ||||||| ||||||||||||||||||| | |||||| Sbjct 2686 CATGCCGATCACCGAGCAGCAGTTGCTGCAGATCCTCCCGAACGCCGGCCGCCAAGCCGG 2745 Query 24769 CGTTTTTGTTGGTGCGC 24785 |||||||||| ||||| Sbjct 2746 CGTTTTTGTTTCTGCGC 2762 >seq3087082 Length=4623 Score = 86.0 bits (94), Expect = 2e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 24707 GCCATGCCCATCACCGAGCAGAAACTGCTGCATATCCTCCCGAACGCCGGCCCTCGAGCC 24766 || ||||||||||| |||||| | ||||||| ||||||||||||||||||| | |||| Sbjct 3797 GCTATGCCCATCACTGAGCAGCAGTTGCTGCAGATCCTCCCGAACGCCGGCCGCCAAGCC 3856 Query 24767 GGCGTTTTTGTT 24778 |||||||| ||| Sbjct 3857 GGCGTTTTCGTT 3868 >seq3023355 Length=832 Score = 84.2 bits (92), Expect = 7e-12 Identities = 137/196 (70%), Gaps = 6/196 (3%) Strand=Plus/Plus Query 45544 CCAGCTCAACCGAGGTTGC---GAGTCTCGCCCCGACAAGCGTCCGGTCCTCAGCGACCT 45600 |||||||||||| || | ||| || || ||||||| ||||| | |||| | Sbjct 634 CCAGCTCAACCG---TTCCCTGGAGCAACGGCCGAACAAGCGCCCGGTGAACTCCGACTT 690 Query 45601 GCGCGAGTCCGGCGCCATTGAGCAAGACGCCGACATCGTCATGTTCGTGTACCGCGATGA 45660 ||| || ||||| || || ||||| || |||||| | ||||||||||||||||||| || Sbjct 691 GCGGGAATCCGGAGCGATCGAGCAGGATGCCGACGTGATCATGTTCGTGTACCGCGACGA 750 Query 45661 AGTCTATTTCCCGAACAGCGACAGGAAGGGTATCGGCGAAATCCTGATCCGGAAGAACCG 45720 || ||| ||| | | || || || || | ||| ||| | ||| | ||| | || Sbjct 751 GGTGTATCACCCCGAGACGGAGCACAAAGGCATTGCCGAGATCATCATCGGCAAGCAGCG 810 Query 45721 GGACGGAGAGATCGGC 45736 | |||| ||||||| Sbjct 811 GAACGGGCCGATCGGC 826 >seq2686037 Length=194 Score = 84.2 bits (92), Expect = 7e-12 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 27080 ACAGGATTTAGGTTCCAGCGCCGCAAGGCGTGAGAGTTCGAGTCTCTCCGTCCGCACCA 27138 || ||||||||||||||||||||| |||||| ||||||||||||||| | ||||||||| Sbjct 191 ACTGGATTTAGGTTCCAGCGCCGCGAGGCGTAAGAGTTCGAGTCTCTTCATCCGCACCA 133 >seq2645378 Length=187 Score = 84.2 bits (92), Expect = 7e-12 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 27083 GGATTTAGGTTCCAGCGCCGCAAGGCGTGAGAGTTCGAGTCTCTCCGTCCGCACCA 27138 ||||||||||||||||||||| |||||| ||||||||||||||| | ||||||||| Sbjct 2 GGATTTAGGTTCCAGCGCCGCGAGGCGTAAGAGTTCGAGTCTCTTCATCCGCACCA 57 >seq1087588 Length=116 Score = 84.2 bits (92), Expect = 7e-12 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 27080 ACAGGATTTAGGTTCCAGCGCCGCAAGGCGTGAGAGTTCGAGTCTCTCCGTCCGCACCA 27138 || ||||||||||||||||||||| |||||| ||||||||||||||| | ||||||||| Sbjct 60 ACTGGATTTAGGTTCCAGCGCCGCGAGGCGTAAGAGTTCGAGTCTCTTCATCCGCACCA 2 >seq366846 Length=1509 Score = 84.2 bits (92), Expect = 7e-12 Identities = 114/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 45569 CGCCCCGACAAGCGTCCGGTCCTCAGCGACCTGCGCGAGTCCGGCGCCATTGAGCAAGAC 45628 ||||| ||||||| ||||| | |||| |||| || ||||| || || ||||| || Sbjct 417 CGCCCGAACAAGCGCCCGGTGAACTCCGACTTGCGTGAATCCGGAGCGATCGAGCAGGAT 358 Query 45629 GCCGACATCGTCATGTTCGTGTACCGCGATGAAGTCTATTTCCCGAACAGCGACAGGAAG 45688 || ||| | ||||||||||||||||||| || || ||| ||| | | || || Sbjct 357 GCTGACGTGATCATGTTCGTGTACCGCGACGAGGTGTATCACCCCGAGACGGAACACAAA 298 Query 45689 GGTATCGGCGAAATCCTGATCCGGAAGAACCGGGACGGA 45727 || || | ||||||| | ||| | ||| | ||| ||||| Sbjct 297 GGCATTGCCGAAATCATCATCGGCAAGCAGCGGAACGGA 259 >seq221954 Length=357 Score = 84.2 bits (92), Expect = 7e-12 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 27083 GGATTTAGGTTCCAGCGCCGCAAGGCGTGAGAGTTCGAGTCTCTCCGTCCGCACCA 27138 ||||||||||||||||||||| |||||| ||||||||||||||| | ||||||||| Sbjct 356 GGATTTAGGTTCCAGCGCCGCGAGGCGTAAGAGTTCGAGTCTCTTCATCCGCACCA 301 >seq2815396 Length=244 Score = 82.4 bits (90), Expect = 3e-11 Identities = 121/169 (72%), Gaps = 2/169 (1%) Strand=Plus/Minus Query 45569 CGCCCCGACAAGCGTCCGGTCCTCAGCGACCTGCGCGAGTCCGGCGCCATTGAGCAAGAC 45628 || ||| ||||||| ||||| | |||||||||||| ||||| || || ||||| || Sbjct 180 CGTCCCAACAAGCGCCCGGTGAACTCCGACCTGCGCGAATCCGGAGCGATCGAGCAGGAT 121 Query 45629 GCCGACATCGTCATGTTCGTGTACCGCGATGAAGTCTA-TTTCCCGAACAGCGACAGGAA 45687 || ||| | ||||||| |||||||| || || || || |||||| | ||| || Sbjct 120 GCTGACGTGATCATGTTTGTGTACCGGGACGAGGTGTACCACCCCGAAACGGAACA-TAA 62 Query 45688 GGGTATCGGCGAAATCCTGATCCGGAAGAACCGGGACGGAGAGATCGGC 45736 || || | ||| ||| | ||| | ||| | ||| |||| ||||||| Sbjct 61 AGGCATTGCCGAGATCATCATCGGCAAGCAGCGGAACGGGCCGATCGGC 13 >seq3084777 Length=3074 Score = 80.6 bits (88), Expect = 9e-11 Identities = 125/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 32244 AGGACATATCGGGCACCACACTGCGGGCAGGCTGCGGCCATGCAATTCTCCCTCTGGCAA 32303 || ||||| || || || || | ||||| || || |||||||| || ||| | || Sbjct 1652 AGCACATAGCGAGCCCCGCATTTTGGGCATGCAGCTGCCATGCAGTTTTCCGAATCACAG 1711 Query 32304 CCAGGGCACTTGTCCTCTTCCGGCTCTGGTCCGGCCCAATCGCATTCGTGGCAGGCAGCC 32363 || ||||||||||||||| || || || || ||| ||||| || |||||||| | Sbjct 1712 CCTGGGCACTTGTCCTCTATTGGTTCAGGGCCTTGCCATTCGCAATCATGGCAGGCGCCA 1771 Query 32364 ACGCCCGTGGCGGAATCGTTGATCCCGCCATGCTGGCACTCGTCGCATCGCCTGGCCTC 32422 | |||| | ||||| || || ||| |||| | ||| | ||||| | | |||||| Sbjct 1772 ATGCCCACTCCAGAATCATTAATTCCGACATGGTTGCAGTTATCGCACTGGCGGGCCTC 1830 >seq3056642 Length=1263 Score = 80.6 bits (88), Expect = 9e-11 Identities = 61/72 (85%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 24707 GCCATGCCCATCACCGAGCAGAAACTGCTGCATATCCTCCCGAACGCCGGCCCTCGAGCC 24766 |||||||| |||||||||||| | ||||||| || |||||||||||||||| ||| Sbjct 72 GCCATGCCTATCACCGAGCAGCAGTTGCTGCAGATACTCCCGAACGCCGGCCGCAATGCC 13 Query 24767 GGCGTTTTTGTT 24778 |||||||||||| Sbjct 12 GGCGTTTTTGTT 1 >seq1824633 Length=127 Score = 80.6 bits (88), Expect = 9e-11 Identities = 59/69 (86%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 24710 ATGCCCATCACCGAGCAGAAACTGCTGCATATCCTCCCGAACGCCGGCCCTCGAGCCGGC 24769 ||||| |||||||||||| | ||||||| ||||||||||||||||||| |||||| Sbjct 32 ATGCCGATCACCGAGCAGCAGTTGCTGCAGATCCTCCCGAACGCCGGCCGCAATGCCGGC 91 Query 24770 GTTTTTGTT 24778 ||||||||| Sbjct 92 GTTTTTGTT 100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 166419218515852