Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_016767.1
Length=60714
Score E
Sequences producing significant alignments: (Bits) Value
seq3088273 122 3e-23
>seq3088273
Length=8614
Score = 122 bits (134), Expect = 3e-23
Identities = 247/361 (68%), Gaps = 12/361 (3%)
Strand=Plus/Plus
Query 1432 TCAAGCGGATGCACAGCCGCAACATCATCCTGAAGGCCCGCCAGCTCGGCTTTACGACGT 1491
|| || ||||||| | ||| |||||||||||||| || |||||||| || |||||||||
Sbjct 3283 TCCAGGGGATGCATACCCGGAACATCATCCTGAAAGCTCGCCAGCTGGGGTTTACGACGC 3342
Query 1492 TCCTATGTATCTTCTTCCTCGACTGCA-CCCTGTTC-CGGCCG-AACGTGCGCGCCGGCA 1548
| | || ||| || | || |||| | ||||| ||| | | |||||| |
Sbjct 3343 TGGTGTGCATCGTCCAGTTGGA-TGCAGCGTTGTTCGAGGCTGCCAAGTGCGC-----CT 3396
Query 1549 TCATCGCCCACGAAGAGGACGCGGCGAAGGCCATCTTCCGAGACAAGGTGAAGTTCGCCT 1608
| ||||| ||| | | ||| |||||| | | ||||| || |||||||| | |||||
Sbjct 3397 TGATCGCTCACACACTGAACGACGCGAAGCGCCTTTTCCGGGAAAAGGTGAAATACGCCT 3456
Query 1609 ACCTCAACCTGCCGGCTCACCTGCGCGAGGTGATGCCCCTGAAGCGTGACGCAGCTGAAG 1668
|| ||| |||||| | || |||| | | || | | ||||| || | |
Sbjct 3457 ACGACAATCTGCCGAAGGAGCTTCGCGCTGCCAACCCGGCGCGGAACGACGCGGCCGGCG 3516
Query 1669 AGCTTCTGTTCGCCCACAACAACAGCTCGATCCGCGTCTCCACGTCGATGCGTTCGGGCA 1728
|||| |||| | ||| | | ||| | ||| ||||| ||| | ||| ||||
Sbjct 3517 AGCTGGTGTT---CAGCAAGGGCGGTTCGCTTTACGTTTCCACCTCGTTCCGTGGCGGCA 3573
Query 1729 CCATGCAGTACCTGCACATTTCCGAGTTCGGGAAGATATGCGCCAAGCGTCCGGACAGGG 1788
| ||| ||||||||| | ||||||||||||||||| ||||||||| |||| ||| ||
Sbjct 3574 CGCTGCGCTACCTGCACGTATCCGAGTTCGGGAAGATCTGCGCCAAGTTTCCGCACAAGG 3633
Query 1789 C 1789
|
Sbjct 3634 C 3634
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 187042057249432
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |