Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09] 3,088,511 sequences; 2,785,377,831 total letters Query= NC_018282.1 Length=61167 Score E Sequences producing significant alignments: (Bits) Value seq322084 84.2 8e-12 >seq322084 Length=21621 Score = 84.2 bits (92), Expect = 8e-12 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 52547 TTCTTCTCCACCCTGTCCGGGCTGTCCCGGTCGGAGAACAAGAAGCTGGCGGCAATCGGC 52606 |||||| || | || || | || || ||| | ||||||||||| || || |||||| Sbjct 2711 TTCTTCGGCAACATGGCCAGCCTCAGCCAGTCCGGAAACAAGAAGCTCGCCGCGATCGGC 2770 Query 52607 AAGGCGGCGGCTATCACCACGGCGACCATTGACGGCGTGCTGGCGGTTCAGAAGGCCCT 52665 ||||||||||| |||| | ||| ||||| |||||| ||||| || |||||||| || Sbjct 2771 AAGGCGGCGGCAATCATCCAGGCCACCATGGACGGCTATCTGGCCGTGCAGAAGGCTCT 2829 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 188438491621078