Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_018454.1
Length=39974
Score E
Sequences producing significant alignments: (Bits) Value
seq3088273 753 0.0
seq295506 374 2e-99
seq3043706 159 9e-35
seq3088057 120 7e-23
seq277625 109 1e-19
seq3088451 100 7e-17
seq3084832 96.9 9e-16
seq3086781 91.5 4e-14
seq347631 91.5 4e-14
>seq3088273
Length=8614
Score = 753 bits (834), Expect = 0.0
Identities = 1064/1488 (72%), Gaps = 29/1488 (2%)
Strand=Plus/Plus
Query 17506 TGATGGATGAGCTTTCAGGGGGTGCCTGATGGCGCTTAGACCTGAACACCTCGCACGGCT 17565
||||||| || || ||| || ||||||| | | ||| || ||| | | |||
Sbjct 3129 TGATGGACGAACTATCACAGGACGCCTGATA----TGAAACCCGAGCACATGAAGCTGCT 3184
Query 17566 AAGGGATAAATTCTGGCGGCTTAACCACCTGTACTGGATCACCGACAAACGCGGGAAGCC 17625
||||| |||||||| || || | || |||| ||||||||||| | || |||
Sbjct 3185 TCGGGATCGGTTCTGGCGACTGAATAATCTCTACTTCATCACCGACAAGCAGGGAAAGAA 3244
Query 17626 GGTACGTTTCAAAATGACCCCGGAGCAGTTGGCCTACTTCGAGGGGATGCATACACGAAA 17685
||| || ||| ||||| | ||||||| | | |||||| ||||||||||||| || ||
Sbjct 3245 GGTTCGCTTCCGCATGACGCAGGAGCAGATCGATTACTTCCAGGGGATGCATACCCGGAA 3304
Query 17686 CATCATCCTGAAAGCGCGCCAGCTCGGTTTTACAACGCTGGTGTGCATCATTCAGCTCGA 17745
||||||||||||||| |||||||| || ||||| ||||||||||||||| | ||| | ||
Sbjct 3305 CATCATCCTGAAAGCTCGCCAGCTGGGGTTTACGACGCTGGTGTGCATCGTCCAGTTGGA 3364
Query 17746 TGCCGCGCTCTTTGAGGGCGCAAAGTGCGCGCTTATCGCTCACACCCTCAATGACGCAAA 17805
||| ||| | || |||| || |||||||| | ||||||||||| || || ||||| ||
Sbjct 3365 TGCAGCGTTGTTCGAGGCTGCCAAGTGCGCCTTGATCGCTCACACACTGAACGACGCGAA 3424
Query 17806 GCGCCTTTTCCGGGAGAAAATCAAATATGCCTATGATCGACTGCCTGCTGAGATCCGGGC 17865
||||||||||||||| || | ||||| ||||| || ||||| ||| | || ||
Sbjct 3425 GCGCCTTTTCCGGGAAAAGGTGAAATACGCCTACGACAATCTGCCGAAGGAGCTTCGCGC 3484
Query 17866 GGCTAATCCTGCGTCTAATGATGCCGCTGGCGAGCTGGTTTTTAAGAAGGGCGGCTCGCT 17925
|| || || ||| || || || || ||||||||||| || | |||||||| |||||
Sbjct 3485 TGCCAACCCGGCGCGGAACGACGCGGCCGGCGAGCTGGTGTTCAGCAAGGGCGGTTCGCT 3544
Query 17926 CTATGTTTCGACATCGTTTCGTGGCGGCACGCTGCGCTATCTTCATGTGTCCGAGTTCGG 17985
|| ||||| || ||||| |||||||||||||||||||| || || || |||||||||||
Sbjct 3545 TTACGTTTCCACCTCGTTCCGTGGCGGCACGCTGCGCTACCTGCACGTATCCGAGTTCGG 3604
Query 17986 GAAGATCTGCGCAAAGTACCCGGACAAGGCGCGCGAAATTGTCACTGGTGCTTTTGAAGC 18045
|||||||||||| |||| ||| |||||||||| || || ||||| || || || || ||
Sbjct 3605 GAAGATCTGCGCCAAGTTTCCGCACAAGGCGCGGGAGATCGTCACCGGCGCCTTCGAGGC 3664
Query 18046 TGTTTCAACTGACTGTTTCACGACGATTGAAAGCACAGCAGAAGGCCGCGCGGGCTATTT 18105
||| | |||| |||||| || || || || ||||||||||| || || |||||
Sbjct 3665 TGTCGCCGCTGAATGTTTCGTCACCATCGAGTCGACGGCAGAAGGCCGGGCCGGGTATTT 3724
Query 18106 CTTCGATTATTGCCAGACTGCGGAAAAAGCGGC----GCTATCTGGTGCGCCCCTCTCTC 18161
||| || || | ||| | || | |||| | || |||||| ||| || |
Sbjct 3725 CTTTGACTACAGTCAGTCAGC----AGAGCGCCAGCAACTGGCTGGTGTGCCACTGGGGC 3780
Query 18162 AACTGAGCTGGAAATTCTTCTTTTTCAGCTGGTGGATGAA-----CCCCCAGTATGCAAT 18216
|| |||||| ||||| || ||||||||||||| || || ||| | | |
Sbjct 3781 TGCTCGACTGGAAGTTCTTTTTCTTCAGCTGGTGGAACAACAAGGCCTACAGCCTTGATT 3840
Query 18217 CGACC-CCGTAGAGCCGCTATCACAGCGCCTGCGCGATTATTTCGATGAGCTGGAGGCAA 18275
||||| ||| | || || | ||||||||| ||| || ||| | ||| || || |
Sbjct 3841 CGACCGACGTGGTGCTGC---CGCAGCGCCTGACCGACTACTTCAACGAGTTGTTCGCCA 3897
Query 18276 AGCACCGCCT-TACGCTCAACGACCGCCAGAAAGCGTGGTATCAGGCCAAAGAAACCACC 18334
|||| || | || | || | ||||| || ||||| ||||| || | ||
Sbjct 3898 AGCATGGCATCGACAC-CAGCCCGGGCCAGCGCGCCTGGTACGCCGCCAAGGAGAAGACA 3956
Query 18335 CTCGGCGACGACATGAAACGGGAATACCCGTCTATCCCCGCCGAGGCGTTCCAGCAGTCC 18394
||||||||||||||||| ||||| |||||||| ||||||| ||| || |||||||||||
Sbjct 3957 CTCGGCGACGACATGAAGCGGGAGTACCCGTCGATCCCCGTCGAAGCCTTCCAGCAGTCG 4016
Query 18395 GTTGAAGGCGCTTACTACGCGAAACAGTTCGCGTTTCTCTA---CGCACAGCGCCGCATC 18451
|| || |||||||||||||| | |||||| | || || ||| ||| ||||||
Sbjct 4017 GTCGAGGGCGCTTACTACGCCCAGCAGTTCACCAAGCTGTATGCCGCTCAG---CGCATC 4073
Query 18452 GGCCAGTTGCCGGATAACGATCACCTTCCTGTTTACACGTTCTGGGATATCGGCGTCGGT 18511
||| |||| || ||| ||||| || || || | ||||| |||||||| |
Sbjct 4074 GGCACTCTGCCCGACAACAGCCACCTGCCGGTGATGACCATTTGGGACATCGGCGTGAGC 4133
Query 18512 GACTCAACGGCTATCTGGTTTGTGCGCGTGGTGGGGAACGAGTTCCACATCATCGACTAC 18571
||||| || || || ||||| |||||| ||| || | ||| ||| ||||||| |||
Sbjct 4134 GACTCCACCGCCATTTGGTTCGTGCGCCAGGTTGGCGAGCAGTATCACGTCATCGATTAC 4193
Query 18572 TACGAGAACAGCGGCGAAGGGCTTCGCCATTACATGAAGATCCTTAAAGAAAAGGGATAC 18631
||||||||| |||||||| || || |||||||||||| | || || || ||||| |||
Sbjct 4194 TACGAGAACTCAGGCGAAGGCCTGCGGCATTACATGAAGGTGCTCAAGGACAAGGGTTAC 4253
Query 18632 ACCTACGCCGAACACTGGGCGCCCCACGATATAGACAACCGCGAGTTTGCGAACGACGGC 18691
|||||| |||| ||||||| ||| || || || || ||||| ||||| | | || |
Sbjct 4254 ACCTACTCCGAGCACTGGGGGCCGCATGACATTGAGAACCGTGAGTTCGGTAGTGATGCG 4313
Query 18692 AAATCCCGCCGCCAGCTTGCGCGTGAGGGTTATGAGGTGGACGGCGAAATCTATTCGATC 18751
|| | ||| | | || || |||||||| ||| | || ||| | | || |||
Sbjct 4314 AAGACGCGCAAGGACATCGCCCGAGAGGGTTACGAGATCGATGGCCAGGTTTACCGGATG 4373
Query 18752 TCGTTCAGTGTGGTGCCGAAGCTCGGTGTTGCTGAGGGGATCGAGCTGGTGCGCGAAATC 18811
||||| || || |||||| |||| || | || || ||||||| || ||||||||
Sbjct 4374 ACGTTCCAGGTTGTCCCGAAGATCGGGGTGGACGACGGTATCGAGCAGGCCCGCGAAATT 4433
Query 18812 CTGCCCCGCTGCGCTTTTGACAGCGTGAAATGCGAGGAAGGGATAAGCCACCTGGAAGCC 18871
||| || ||||| || ||| ||| ||||| || || || | ||| || |
Sbjct 4434 CTGTCCAAGTGCGCCTTCGACGAATCGAAGTGCGAAGAGGGCATTGCCTGCCTTGAGAAC 4493
Query 18872 TACCGCAAGGAGTGGGATGCCAAGCGCGGCTGCTGGAAAGACAACCCTTTGCACGACTAC 18931
|| |||||||||||||| | |||| ||||||||||||||||| || |||| || |
Sbjct 4494 TATCGCAAGGAGTGGGACGACAAGAAGGGCTGCTGGAAAGACAAGCCGCTGCATGATTGG 4553
Query 18932 ACCTCGCACGCTTCGGACGGTTTCCGCTACTTCGCTGTAGCGATGAGC 18979
|| || |||| || || | ||||| ||||||||||| || | ||||
Sbjct 4554 ACGTCTCACGGCTCCGATGCATTCCGGTACTTCGCTGTCGCCAAGAGC 4601
>seq295506
Length=3618
Score = 374 bits (414), Expect = 2e-99
Identities = 519/723 (72%), Gaps = 8/723 (1%)
Strand=Plus/Minus
Query 18254 TATTTCGATGAGCTGGAGGCAAAGCACCGCCTTACGCTCAACGACC---GCCAGAAAGCG 18310
|| ||||| ||||||| || |||||| | || ||| ||| ||||| ||
Sbjct 1022 TACTTCGAAGAGCTGGCAGCCAAGCACGGGATTG---TCACGAACCCAGGCCAGCGCGCC 966
Query 18311 TGGTATCAGGCCAAAGAAACCACCCTCGGCGACGACATGAAACGGGAATACCCGTCTATC 18370
||||| ||||| || | || ||||||||||||||||| |||||||||||||| |||
Sbjct 965 TGGTACGCAGCCAAGGAGAAGACGCTCGGCGACGACATGAAGCGGGAATACCCGTCGATC 906
Query 18371 CCCGCCGAGGCGTTCCAGCAGTCCGTTGAAGGCGCTTACTACGCGAAACAGTTCGCGTTT 18430
|||| |||||| ||||||||||| | |||||||| |||||||| | |||||| |
Sbjct 905 CCCGTCGAGGCCTTCCAGCAGTCAATCGAAGGCGCCTACTACGCCAGGCAGTTCACAAAG 846
Query 18431 CTCTACGCACAGCGCCGCATCGGCCAGTTGCCGGATAACGATCACCTTCCTGTTTACACG 18490
|||||||| | |||||||| | ||||||| ||| |||| || || ||
Sbjct 845 CTCTACGCCTCCCAGCGCATCGGTGTGCTGCCGGACAACAGCCACCAGCCGGTGATGACC 786
Query 18491 TTCTGGGATATCGGCGTCGGTGACTCAACGGCTATCTGGTTTGTGCGCGTGGTGGGGAAC 18550
|| ||||| ||||||||||| ||||||||||| || ||||| ||||| ||| || | |
Sbjct 785 TTTTGGGACATCGGCGTCGGCGACTCAACGGCCATTTGGTTCGTGCGTCAGGTCGGCACC 726
Query 18551 GAGTTCCACATCATCGACTACTACGAGAACAGCGGCGAAGGGCTTCGCCATTACATGAAG 18610
||||| ||| ||||||||| |||| |||||||||||||||| || || || |||||||||
Sbjct 725 GAGTTTCACGTCATCGACTTCTACCAGAACAGCGGCGAAGGCCTGCGGCACTACATGAAG 666
Query 18611 ATCCTTAAAGAAAAGGGATACACCTACGCCGAACACTGGGCGCCCCACGATATAGACAAC 18670
| || || || || ||| ||| |||| ||||||| ||| ||||| || ||||||
Sbjct 665 GTGCTGAAGGATCGTGGCTACGGGTACTCCGAGCACTGGGGGCCGCACGACATCGACAAC 606
Query 18671 CGCGAGTTTGCGAACGACGGCAAATCCCGCCGCCAGCTTGCGCGTGAGGGTTATGAGGTG 18730
|||||||| | || | ||| || | || | | || |||||||| || ||| |
Sbjct 605 CGCGAGTTCAGCAGTGATGCCAAGACCAGACGGGAAATGGCCCGTGAGGGCTACGAGATC 546
Query 18731 GACGGCGAAATCTATTCGAT-CTCGTTCAGTGTGGTGCCGAAGCTCGGTGTTGCTGAGGG 18789
|||||| | ||| || | ||||| |||||||| ||| |||| || | || ||
Sbjct 545 GACGGCCAGCACTACCGCATGACCTTTCAG-GTGGTGCCCAAGATCGGCGTAGACGACGG 487
Query 18790 GATCGAGCTGGTGCGCGAAATCCTGCCCCGCTGCGCTTTTGACAGCGTGAAATGCGAGGA 18849
||||| | || ||| || ||||| ||| ||||| || || || ||||| ||
Sbjct 486 CATCGACCAGGCGCGGGAGATCCTTGCCCATTGCGCATTCGATGAATCCAAGTGCGAAGA 427
Query 18850 AGGGATAAGCCACCTGGAAGCCTACCGCAAGGAGTGGGATGCCAAGCGCGGCTGCTGGAA 18909
|| || | | |||||| |||||||||||||||||| | |||| |||||||||||
Sbjct 426 GGGCATCACCGCCCTGGAGAACTACCGCAAGGAGTGGGACGACAAGAAGGGCTGCTGGAA 367
Query 18910 AGACAACCCTTTGCACGACTACACCTCGCACGCTTCGGACGGTTTCCGCTACTTCGCTGT 18969
|||| || | ||||||| | || ||| | | || | |||||||||||||| ||
Sbjct 366 AGACCGGCCGCTTCACGACTGGGCATCCCACCCGGCTGATGCCTTCCGCTACTTCGCGGT 307
Query 18970 AGC 18972
||
Sbjct 306 GGC 304
Score = 181 bits (200), Expect = 3e-41
Identities = 229/312 (73%), Gaps = 2/312 (1%)
Strand=Plus/Minus
Query 17568 GGGATAAATTCTGGCGGCTTAACCACCTGTACTGGATCACCGACAAACGCGGGAAGCCGG 17627
|||| |||| |||||| || ||| |||| |||| ||||| ||||| | || ||| ||
Sbjct 1667 GGGACAAATACTGGCGCCTGAACAACCTCTACTTCATCACGGACAAGCAGGGCAAGAAGG 1608
Query 17628 TACGTTTCAAAATGACCCCGGAGCAGTTGGCCTACTTCGAGGGGATGCATACACGAAACA 17687
| || ||| ||||| |||||| | | ||||||||||||||||| || || |||
Sbjct 1607 TCCGCTTCCGGATGACGGACGAGCAGATTGAATACTTCGAGGGGATGCACACTCGCAACC 1548
Query 17688 TCATCCTGAAAGCGCGCCAGCTCGGTTTTACAACGCTGGTG-TGCATCATTCAGCTCGAT 17746
| ||| |||| || | ||||| || ||||| || | ||| |||||||| || || ||
Sbjct 1547 TGATCTTGAAGGCCAGGCAGCTTGGCTTTACCAC-CGAGTGCTGCATCATCCAACTGGAC 1489
Query 17747 GCCGCGCTCTTTGAGGGCGCAAAGTGCGCGCTTATCGCTCACACCCTCAATGACGCAAAG 17806
|| || || || ||| || |||||||| || ||||| |||||||| || ||||| |||
Sbjct 1488 GCGGCTCTATTCGAGTCAGCCAAGTGCGCCCTGATCGCCCACACCCTGAACGACGCCAAG 1429
Query 17807 CGCCTTTTCCGGGAGAAAATCAAATATGCCTATGATCGACTGCCTGCTGAGATCCGGGCG 17866
||||| ||||||||||| | || || ||||| || ||||| |||||||| ||
Sbjct 1428 CGCCTGTTCCGGGAGAAGGTGAAGTACGCCTACGACAATCTGCCGAAAGAGATCCGCGCC 1369
Query 17867 GCTAATCCTGCG 17878
|| || || |||
Sbjct 1368 GCGAACCCCGCG 1357
Score = 140 bits (154), Expect = 8e-29
Identities = 155/207 (75%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 17894 GGCGAGCTGGTTTTTAAGAAGGGCGGCTCGCTCTATGTTTCGACATCGTTTCGTGGCGGC 17953
|| ||| |||| || | |||||||||||| |||| || || || || || || |||
Sbjct 1289 GGTGAGTTGGTATTCAGCAAGGGCGGCTCGATCTACGTCAGCACCTCCTTCCGGGGTGGC 1230
Query 17954 ACGCTGCGCTATCTTCATGTGTCCGAGTTCGGGAAGATCTGCGCAAAGTACCCGGACAAG 18013
|||||||| || || || || ||||||||||||||||||||||| |||| || |||||
Sbjct 1229 ACGCTGCGTTACCTGCACGTATCCGAGTTCGGGAAGATCTGCGCCAAGTTTCCCCACAAG 1170
Query 18014 GCGCGCGAAATTGTCACTGGTGCTTTTGAAGCTGTTTCAACTGACTGTTTCACGACGATT 18073
|| || || || ||||| || || || || ||||| | || || |||||| ||||||
Sbjct 1169 GCCCGAGAGATCGTCACCGGCGCCTTCGAGGCTGTCGCCACCGATTGTTTCGTCACGATT 1110
Query 18074 GAAAGCACAGCAGAAGGCCGCGCGGGC 18100
||| || || || || || ||||||
Sbjct 1109 GAATCGACGGCGGAGGGGCGGGCGGGC 1083
>seq3043706
Length=1055
Score = 159 bits (176), Expect = 9e-35
Identities = 391/585 (67%), Gaps = 12/585 (2%)
Strand=Plus/Plus
Query 33198 AACGGCGACATGGTGGGCTACACGCTGGAATACGTGGTTGAAATGCAGGTTGACGGCGGG 33257
|||||||||| |||||||| || |||||| | | || || ||||||||
Sbjct 477 AACGGCGACACCAACGGCTACACCGTGCAATACGCGATCGATCTGTCCACCGACGGCGGC 536
Query 33258 AGCTGGCAGCAGGTGCTGAAAACGGCGGTATCCGGCAAAACCACCAGCGGCTACGAGCGG 33317
|| ||| |||||| | ||| | |||||||||||||| | ||||||||
Sbjct 537 GCCTTCGTGCAAGTGCTGGCGGCCGCGTTCAGCGGCAAAACCACCACCAAATACGAGCGC 596
Query 33318 AGCCACCGCATTGATTTACCGGCCGGTAAAACG----TGGAACCTTCGCCTGCGCAGGCT 33373
||||| | || | ||| |||| |||| | |||| ||| ||| ||||| || |
Sbjct 597 TCGCACCGTGTGGACCTGCCG-CCGGCAAAAAGCGGCTGGACCCTGCGCGTGCGCCGGAT 655
Query 33374 CACCCCGAACGCGAACAGCGCACGCATCGGCGACACCATGATGCTGGAAAGCTACACCAC 33433
||| |||||| | | ||| | || | ||| |||| | ||||| || |||
Sbjct 656 CACGCCGAACTCCACCAGTGGTGCGATTGCCGATACCACCACCGTGGAATCCTCTACCGA 715
Query 33434 CATTATTGACGCGAAGCTGCGCTATCCGAACACCGCCTTACTCTACATGGAATTTGATTC 33493
| |||||||| || |||||||| || | || || || | || |||| ||| |
Sbjct 716 AGTGATTGACGCCAAACTGCGCTACCCAGGTTCGGCGTTGATCGGCCTGCAATTCGATGC 775
Query 33494 GAGC-CAGTTTAACGGCTCTATTCCGCAAATCTCCTGCGAGCCGCGCGGGCGTGTCATTC 33552
||| || ||| | || |||||| ||||| ||| | |||||| || ||||
Sbjct 776 -AGCGCAATTTCAA---TCAATTCCGTCGCGCTCCTTCGAACTGCGCGGCCGCATCATCA 831
Query 33553 GCGTTCCTGCGAACTATGACCCCGACACCCGCAGCTATACCGGCACCTGGGATGGCACGT 33612
|| || ||||| ||||| | ||||| || | |||| ||||||||||| |
Sbjct 832 AGGTGCCGAGCAACTACGACCCGCAAACCCGTGTGTACAGCGGCGTGTGGGATGGCACCT 891
Query 33613 TTAAATGGGCGTGGACGGATAACCCGGCCTGGGTGTTTTACGACCTGGTGAT-CACTGAT 33671
| |||| || ||||| || |||||||||||| | | ||||||||| || | ||| |
Sbjct 892 TCAAATCCGCCTGGACCGACAACCCGGCCTGGATCTACTACGACCTGCTGCTGCAC-CAG 950
Query 33672 CGCTTCGGACTCGGCGACCGGCTGGACGCCGATAACGTGGACAAATGGGCGCTCTACCAG 33731
|||| || |||||| || ||| |||||| | |||||||| |||| ||| ||||
Sbjct 951 CGCTATGGCCTCGGCCACTTGCTCAACGCCGGCCAAGTGGACAAGTGGGAGCTGTACCGC 1010
Query 33732 GTGGCGCAATACTGCGATCAGATGGTGCCGGACGGCAGGGGCGGC 33776
| | || |||||||| ||| |||| |||| |||| |||||||
Sbjct 1011 ATCGGCCAGTACTGCGACCAGCCGGTGTCGGATGGCAAGGGCGGC 1055
>seq3088057
Length=7030
Score = 120 bits (132), Expect = 7e-23
Identities = 214/310 (69%), Gaps = 8/310 (3%)
Strand=Plus/Plus
Query 33593 CGGCACCTGGGATGGCACGTTTAAATGGGCGTGGACGGATAACCCGGCCTGGGTGTTTTA 33652
||||| |||||| ||||| || ||| ||| | || | ||||| || |||||||||||
Sbjct 5608 CGGCATCTGGGACGGCACCTTCAAAGAGGCCTACACCAACAACCCTGCGTGGGTGTTTTA 5667
Query 33653 CGACCTGGTGAT-CACTGATCGCTTCGGACTCGGCGACCGGCTGGACGCCGATAACGTGG 33711
||||||||| | ||| | || ||| |||||||| || | || ||| | || |
Sbjct 5668 TGACCTGGTGCTGCACCCTTA-CTACGGCCTCGGCGATCGCATCGATGCCACGATGGTTG 5726
Query 33712 ACAAATGGGCGCTCTACCAGGTGGCGCAATACTGCGATCAGATGGTGCCGGACGGCAGGG 33771
| ||| |||| || | | ||||||||||||||||||||||||||||| || | |
Sbjct 5727 ATCGCTGGTCGCTTTATCGCATCGCGCAATACTGCGATCAGATGGTGCCGGATGGAAAAG 5786
Query 33772 GCGGCGACGGCAAAGAGCCACGCTATATGTGCAACGTCTACGTGCAGAGCCGGGCCGACG 33831
| ||||| ||||| |||| || |||||| | ||| |||| | | |||||| |
Sbjct 5787 G------CGGCATGGAGCCGCGCTTTACCTGCAACCTGTACCTGCAAAAGCAGGCCGAGG 5840
Query 33832 CATTCACGGTTTTGCGCGACTTTGCGGCCATCTTCCGGGGCATGACTTACTGGGGTGGCG 33891
| | | |||| ||| || | || | ||||| | || || | ||||||| |||
Sbjct 5841 CCTACGCGGTGCTGCAGGATCTGGCATCGATCTTTCACGGTCTGGCCTACTGGGACGGCA 5900
Query 33892 ATCAGCTCGT 33901
||| ||||
Sbjct 5901 GCCAGATCGT 5910
>seq277625
Length=52836
Score = 109 bits (120), Expect = 1e-19
Identities = 147/200 (74%), Gaps = 16/200 (8%)
Strand=Plus/Minus
Query 17930 GTTTCGACATCGTTTCGTGGCGGCACGCT---GCGCTATCTTCATGTGTCCGAGTTCGGG 17986
|| ||||| ||||| || ||||||||||| |||| || |||||||||||||||||
Sbjct 29988 GTATCGACCTCGTTCCGGGGCGGCACGCTCCAGCGC---CTGCATGTGTCCGAGTTCGGC 29932
Query 17987 AAGATCTGC--GCAAAGTACCCGGACAAGGCGCGCGAAATTGTCACTGGTGCTTTTGAAG 18044
||||||||| || || |||||||||||| | ||||| ||||| ||||| ||||| |
Sbjct 29931 AAGATCTGCAAGCTGAG--CCCGGACAAGGCTCAGGAAATCGTCACCGGTGCGTTTGAGG 29874
Query 18045 CTGTTTCAACTG---ACTGTTTCACGACGATTGAAAGCACAGCAGAAGGCCGCGCGGGCT 18101
| || || || || || || ||||||||||| || || || || | ||||
Sbjct 29873 CCGTGGGCCTTGGCAACCGTGTC---ACCATTGAAAGCACCGCCGAGGGGCGTGAAGGCT 29817
Query 18102 ATTTCTTCGATTATTGCCAG 18121
| |||||| |||||| ||
Sbjct 29816 ACTTCTTCACCTATTGCGAG 29797
>seq3088451
Length=13260
Score = 100 bits (110), Expect = 7e-17
Identities = 328/499 (66%), Gaps = 18/499 (4%)
Strand=Plus/Plus
Query 31333 TGGACGTCTGCAACGGTACGCTG---ACGGCCTGCAAGCTGCGATTTGGCGAGGCGCAGC 31389
||||||| ||| ||| || ||| | || ||| | | ||| |||||||||| ||| |
Sbjct 9681 TGGACGTGTGCGACGCCACCCTGGGTAAGGGCTGTATCCCGCGTTTTGGCGAGG-GCAAC 9739
Query 31390 CGCTCGACT-TCGGCGGATTCCCCGGCACCAGTCTGATCA---GGAGCTAAACATGGACG 31445
| || | | |||| |||||||||| | |||| |||||| |||||| |
Sbjct 9740 CCCTTGCCAATCGGTGGATTCCCCGCCGTTTCCTTGATAGCTCGGAGCTGAACATGCGC- 9798
Query 31446 AAACAC-TGATTCAGGAGATTAAGCGGCACGCGGCGCAAACCTACCCGCAGGAGTGCTGC 31504
|||||| | ||| || ||| || ||| |||||| |||||| | |||||||||
Sbjct 9799 AAACACATCATTGCGGCCATTCAGGCGCATGCGGCGTCCGAGTACCCGAAAGAGTGCTGC 9858
Query 31505 GGGCTTGTCATTCTGCAGGACGGCCAGCCGCGT---TATCTCCCCTGCAGAAACACCGC- 31560
||||| || ||| | ||||| | ||| ||| |||| ||| | |||| ||
Sbjct 9859 GGGCTG---ATACTGGCCGTCGGCCGGGCGCAGAAGTATTTCCCGTGCCGGAACATTGCC 9915
Query 31561 AGACAACCCGGCGGCGCATTTTCGCATCGCGCCGGAGGATTACGCCCGCGCCGAAGATCA 31620
| | || || | | || || ||| || ||||| |||||| || ||||| ||
Sbjct 9916 ACGGAGCCAAACGAAG-AGTTCCGGCTCGACCCCGAGGACTACGCCGCGGCGGAAGACCA 9974
Query 31621 GGGCGACGTGGTAGGCATCGTTCACAGCCACCCTGACGCCACCAGCCAGCCGAGCGAGCT 31680
|||| | ||| | |||||||| ||| || || ||||| |||||| |||| ||
Sbjct 9975 GGGCCAGGTGATTGGCATCGTCCACTCGCATCCGGACGCAACCAGCAGGCCGTCGTCGCG 10034
Query 31681 GGATAAGGCGCAGTGCGACGTTACAGAGCTGCCCTGGCATATCCTGAGCTGGCCCGAGGG 31740
|| |||| ||| || | || |||||||||| || ||| ||||||||||||
Sbjct 10035 AGACCTGGCGATGTGTGAGGCCACGACTTTGCCCTGGCACATTCTGTCCTGGCCCGAGGG 10094
Query 31741 CGATTTACGCACCATCTACCCGCGGGGTGAGCTGCCGCTGATTGGCCGCTCGTTTGTGCT 31800
||| | ||||| ||| || || | ||||||| | | ||| | |||||||
Sbjct 10095 CGACCTGCGCACGATCACTCCAACCGGCAACACGCCGCTGCTGAGGCGCCCATTTGTGCA 10154
Query 31801 GGGCGTCTATGACTGCTGG 31819
|| | | |||||||||
Sbjct 10155 TGGAGCATGGGACTGCTGG 10173
>seq3084832
Length=3091
Score = 96.9 bits (106), Expect = 9e-16
Identities = 140/194 (72%), Gaps = 4/194 (2%)
Strand=Plus/Plus
Query 17930 GTTTCGACATCGTTTCGTGGCGGCACGCTGCGCTATCTTCATGTGTCCGAGTTCGGGAAG 17989
|| ||||| ||||||||||| |||||||| | || |||||||| |||||||| |||
Sbjct 2438 GTGTCGACGTCGTTTCGTGGTGGCACGCTCCAGCGGCTGCATGTGTCGGAGTTCGGCAAG 2497
Query 17990 ATCTGCGCAAAGTACCCGGACAAGGCGCGCGAAATTGTCACTGGTGCTTTTGAAGCTGTT 18049
|| ||| | | |||||||||||| | ||||| ||||| ||||| ||||| || | |
Sbjct 2498 ATATGCAAACTGAGCCCGGACAAGGCTCAGGAAATCGTCACCGGTGCGTTTGAGGC-GGT 2556
Query 18050 TCAACTGACTGTTTCACG--ACGATTGAAAGCACAGCAGAAGGCCGCGCGGGCTATTTCT 18107
| ||| | || | || || ||||| || || || ||||| | ||| || ||||
Sbjct 2557 TGGCCTG-GGGAATCGGGTCACAATCGAAAGTACCGCCGAGGGCCGTGAGGGTTACTTCT 2615
Query 18108 TCGATTATTGCCAG 18121
|| |||||| ||
Sbjct 2616 TCACCTATTGCGAG 2629
>seq3086781
Length=4259
Score = 91.5 bits (100), Expect = 4e-14
Identities = 149/215 (69%), Gaps = 6/215 (3%)
Strand=Plus/Minus
Query 33708 GTGGACAAATGGGCGCTCTACCAGGTGGCGCAATACTGCGATCAGATGGTGCCGGACGGC 33767
|| ||||| |||| ||| || | | | |||| |||||||| || |||||||||||||
Sbjct 1611 GTCGACAAGTGGGAGCTTTATCGGATCTCGCAGTACTGCGACCAACTGGTGCCGGACGGG 1552
Query 33768 AGGGGCGGCGACGGCAAAGAGCCACGCTATATGTGCAACGTCTACGTGCAGAGCCGGGCC 33827
| ||||||| | | |||| |||| || ||||| | || |||| || ||||
Sbjct 1551 AAGGGCGGCCAGG------AGCCGCGCTTCATCTGCAATCTGAACTTGCAAAGTAAGGCC 1498
Query 33828 GACGCATTCACGGTTTTGCGCGACTTTGCGGCCATCTTCCGGGGCATGACTTACTGGGGT 33887
|| || | | | |||| ||| | | ||||| | |||||||||||| ||||||| |
Sbjct 1497 GATGCCTGGTCTCTGCTGCGTGACATCTCAGCCATTTACCGGGGCATGACCTACTGGGCT 1438
Query 33888 GGCGATCAGCTCGTTACGCTGGCAGACATGCCGCG 33922
| || || | || |||| |||||||||||
Sbjct 1437 CAGGGCCAAGTCTTCACCTTGGCGGACATGCCGCG 1403
>seq347631
Length=610
Score = 91.5 bits (100), Expect = 4e-14
Identities = 172/254 (68%), Gaps = 12/254 (5%)
Strand=Plus/Minus
Query 33736 CGCAATACTGCGATCAGATGGTGCCGGACGGCAGGGGCGGCGACGGCAAAGAGCCACGCT 33795
|||| || ||||| || |||||||||||||| | ||| ||| | | |||| ||||
Sbjct 268 CGCAGTATTGCGACCAAATGGTGCCGGACGGAAAGGGTGGCCAGG------AGCCGCGCT 215
Query 33796 ATATGTGCAACGTCTACGTGCAGAGCCGGGCCGACGCATTCACGGTTTTGCGCGACTTTG 33855
|| |||||| | || |||||||| ||| || || | || | |||||||| |
Sbjct 214 TCATCTGCAACTTGAACCTGCAGAGCAAGGCTGATGCCTGGTCGCTGCTGCGCGACATCT 155
Query 33856 CGGCCATCTTCCGGGGCATGACTTACTGGGGTGGCGATCAGCTCGTTACGCTGGCAGACA 33915
| | |||| |||||||||||||||||||| | || | |||| ||| | || |
Sbjct 154 CATCGATCTACCGGGGCATGACTTACTGGGCCCAGGGCCAAGTTTTTACCCTGTCGGATA 95
Query 33916 TGCCGCGC------GATGTTGATTATGTCTACACGCGCGCGAATGTGGTTGAAGGGCGCT 33969
|||||||| || | || | | ||||| ||||| || ||| | || || |
Sbjct 94 TGCCGCGCGCCACGGACTTCGACTTCGCTTACACCCGCGCAAACGTGATCGATGGCAAGT 35
Query 33970 TCACTTACGCCAGC 33983
|||| ||| |||||
Sbjct 34 TCACCTACTCCAGC 21
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 123108174538752
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |