Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_019400.1
Length=147940
Score E
Sequences producing significant alignments: (Bits) Value
seq3046662 95.1 1e-14
>seq3046662
Length=1096
Score = 95.1 bits (104), Expect = 1e-14
Identities = 194/283 (69%), Gaps = 4/283 (1%)
Strand=Plus/Minus
Query 50037 GCCATAGCGTTGATCGTCAGGTCACGACGAGACAGATCCTCCACCAGTGTCACATCGGGG 50096
||||| |||||||| ||||||||||| ||| ||| ||||| |||| ||||| ||||||
Sbjct 336 GCCATGGCGTTGATGGTCAGGTCACGGCGAATCAGGTCCTCTTCCAGCGTCACCTCGGGG 277
Query 50097 CTGAAGAATGTCTCGAAGTCAGTATGACCGTTACCAGTCTTACGCTCAGTACGGGCGAGA 50156
||| | | | ||| | | ||| ||| |||| || || || ||||||||
Sbjct 276 CTGGCGTGAAACACAAAGCCGCCGTAACCCCGACCGCTCTTGCGTTCGGTGCGGGCGAGG 217
Query 50157 GCATACTCTTCGTTGGTTTCAGGATGCAGGTATACTGGAAAAGCAGCGCCAACCTGGGTG 50216
|| || || ||| | | | || | |||| |||| || || ||||||| || | ||
Sbjct 216 GCGTATTCGTCGCCGTTCTTGGGGTCCAGGAATACCGGGAAGTCAGCGCCGACTGGCTTG 157
Query 50217 AAACCTTTATTGATCATTTCTTC-GTGCGTTGCACCCACAACCACGTAGTCACGGTC-AT 50274
| ||||| || ||||| ||| ||| || ||||| || || ||| ||| || |
Sbjct 156 TAGCCTTTGGCGAGCATTTGTTCAGTG-GTCGCACCGACCACAACGCGGTCGATATCGGT 98
Query 50275 GAACTTCACGACCAAGCAAACCATCACGCACAGCGCCACCTAC 50317
|| ||| | | || |||| | ||||||||| || || || ||
Sbjct 97 GACCTTGA-GGCCGAGCAGGCGATCACGCACCGCACCGCCGAC 56
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 455008368924000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |