Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_019419.2
Length=43457
Score E
Sequences producing significant alignments: (Bits) Value
seq3088451 104 6e-18
>seq3088451
Length=13260
Score = 104 bits (114), Expect = 6e-18
Identities = 213/317 (67%), Gaps = 0/317 (0%)
Strand=Plus/Minus
Query 27504 ACCAACTGATCGCAGCGCTGCGCGATCTGGTAGAGCGCGTACCGGTTTAACATTTGCGGT 27563
|||||||| ||||| ||| ||||| |||| ||| | || || | ||| |||
Sbjct 12148 ACCAACTGGTCGCAATACTGTGCGATTCGGTAAAGCTCCCACTTGTCCACCATCCACGGC 12089
Query 27564 TTGATACGCCGACCGAGGCCGAAGCGCTCAGTAATACAAATATCGTACCAGTGCCACGCA 27623
||||| || || || || || || || || | || || |||| | ||| ||
Sbjct 12088 TTGATGCGGCGGCCCAGACCAAAACGGTCTTGGGTGCAGATGCCGTAGGTGATCCAGGCC 12029
Query 27624 GGGTTATCCGTCCATGCGCGTTTAAACGTGCCGTCCCAGTCCCCGGAATAAGTATGATTA 27683
||||||| ||||| || ||| | |||||||||||| | ||||| || || |
Sbjct 12028 GGGTTATTGGTCCAGGCCTCTTTCATGGTGCCGTCCCAGGCGCCGGAGTAGGTGCGGGCC 11969
Query 27684 ATCGGGTCGTAGTTGTTCGGTATTAGAACTTTGCGGCCTTTGCACTTGATGGACACGCGC 27743
| ||| ||||||||| |||| | | ||| | || ||||| | || |||| |
Sbjct 11968 ACCGGATCGTAGTTGCTCGGCACCTGCCACCGGCGCGCCTTACACTTCACGGTCACGGCC 11909
Query 27744 GGGATGTTCTGGAACGCTTTGGCGTCGAACTCCACAAACAACAGCGCGGTTAGCGGGTAA 27803
|| |||||| |||| | |||||||||||| || |||| ||||||||| |||||
Sbjct 11908 GGAATGTTCGTGAACTGCTCGGCGTCGAACTCGACGAACAGCAGCGCGGTGTTTGGGTAG 11849
Query 27804 CGCAGGCGGGCGTCGAT 27820
||||| ||||||||
Sbjct 11848 CGCAGCTTTGCGTCGAT 11832
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 133844997753858
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |