Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_019457.1
Length=44492
Score E
Sequences producing significant alignments: (Bits) Value
seq3087968 179 1e-40
seq108461 131 5e-26
>seq3087968
Length=6546
Score = 179 bits (198), Expect = 1e-40
Identities = 161/202 (80%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 10863 GGTTGTGTTATTGGACCCATCCGCACAGTCGCATGGCGAATCCTCGATGCCCAATATTTC 10922
|||||||| |||||||| | ||| |||| ||||| |||| || ||||||||||||
Sbjct 1 GGTTGTGTGTATGGACCCAAAAGAACAATCGCGTGGCGGGTCCTGGACGCCCAATATTTC 60
Query 10923 GGATTGGCCCAACGACGCAAGCGTGTGTTTGTTGTCGCAAGTGCTCGAAAAGGATTCGAT 10982
|| |||||||||||||| |||||||| |||||||||||||||||| | || ||||||
Sbjct 61 GGCCTGGCCCAACGACGCCGTCGTGTGTTCGTTGTCGCAAGTGCTCGAGACGGGTTCGAT 120
Query 10983 CCCGCAGAAGTATTATTTGAGCGCGAAGGCGTGCGAAGGGATTCTGCGCCGAGCCGAGAA 11042
|| | || ||| | ||||||||||||||| |||| ||||| |||||||| ||||||
Sbjct 121 CCAACCGAGGTACTTTTTGAGCGCGAAGGCTTGCGCCGGGATACTGCGCCGCGCCGAGGC 180
Query 11043 GCGTTGCAAGAAGCTGCCGGAA 11064
| | |||||| | | ||||||
Sbjct 181 GAGGGGCAAGACGTTACCGGAA 202
>seq108461
Length=6150
Score = 131 bits (144), Expect = 5e-26
Identities = 98/115 (85%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 10926 TTGGCCCAACGACGCAAGCGTGTGTTTGTTGTCGCAAGTGCTCGAAAAGGATTCGATCCC 10985
||||||||||||||| |||||||| |||||||||||||||||| | || |||||||||
Sbjct 184 TTGGCCCAACGACGCCGTCGTGTGTTCGTTGTCGCAAGTGCTCGAGACGGGTTCGATCCC 243
Query 10986 GCAGAAGTATTATTTGAGCGCGAAGGCGTGCGAAGGGATTCTGCGCCGAGCCGAG 11040
||| ||| | |||||||| ||||||||||| ||||| |||||||| ||||||
Sbjct 244 ACAGCGGTACTTTTTGAGCGAGAAGGCGTGCGCCGGGATACTGCGCCGCGCCGAG 298
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 137035526616228
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |