Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_019488.1
Length=34117
Score E
Sequences producing significant alignments: (Bits) Value
seq3088488 358 1e-94
seq3088503 309 6e-80
seq3084702 114 3e-21
>seq3088488
Length=17142
Score = 358 bits (396), Expect = 1e-94
Identities = 786/1160 (68%), Gaps = 26/1160 (2%)
Strand=Plus/Minus
Query 27110 GATTACCACCACGGGGTGCGCGTTGTTGAAATCAACGAGGGCACCCGACCTATTACCACG 27169
||||| | |||||| ||||| || | ||| ||||||| |||||||| || ||| |||
Sbjct 16622 GATTATCTCCACGGCGTGCGGGTCATCGAACTCAACGACGGCACCCGCCCCATTCGCACT 16563
Query 27170 GTGAGCACTGCCATCGTGGGCATGGTCTGCACCGGCGATGATGCTGATGCGTCCGTGTTC 27229
| ||| || || | |||||||| ||||||| || ||||| || | ||| |||
Sbjct 16562 ATTCCCACCGCAGTCATCGGCATGGTTTGCACCGCTGAAGATGCGGACCCACTCGTTTTC 16503
Query 27230 CCCCTCAATAAGCCGGTCCTGCTGACTGATGTGCTCACCGCCAGCGGTAAAGCGGGGGAG 27289
|| || | | || ||||| | || | |||| |||||| ||| || || || |
Sbjct 16502 CCTCTGGACACTCCAGTCCTCATCACCAACGTGCAAACCGCCGTCGGCAAGGCCGGCGTC 16443
Query 27290 TCCGGCACGCTGGCCCGCTCGCTGGACGCGATTGCAGATCAGGCAAAACCCGTGAC--TG 27347
||||| ||||| | ||| | | || || || ||| | || || | || |
Sbjct 16442 AAGGGCACCCTGGCTGCCAGCCTGCAAGGCATCGCCGACCAGACCAAGCC--TTACGTTA 16385
Query 27348 TCGTTGTGCGTGTGGCGCAGGGCGAAACCGAAGCGGAAACCACCTCCAATATTATCGGCG 27407
|||| || || || | |||| ||||||| || || | | || ||||
Sbjct 16384 TCGTGGTACGGGTCAAAGAAGGCGCTGACGAAGCGACGACTACGAGCGCCCTGATTGGCG 16325
Query 27408 GCGTAACTTCCGACGGTAAGAAAACGGGCATGAAAGCGCTACTGTCGGCGCAGTCGCAGC 27467
| ||| | |||| | | || ||||||||||| || || | || | || |
Sbjct 16324 GTACAACACCAACCGGTCAATACACCGGCATGAAAGCTCTGCTCGCAGCCAAATCACGCG 16265
Query 27468 TCGGTGTCAAGCCGTGCATTCTTGGGGTGCCGGGACATGACACTCAGGCCGTTGCTACTG 27527
| || | | ||| | || ||||| ||||| || | |||| | | | || || || |
Sbjct 16264 TGGGCATGACTCCGCGTATCCTTGGCGTGCCAGGCCTCGACAGTTTGCCAGTAGCCACCG 16205
Query 27528 AACTGCTGGGCGTGGCGCAAAG-CTTGCGCGGGTTTGCCTACCTTGCTGCTAATGG--CT 27584
|| | | | || ||||| | |||||| ||||| ||| | || ||| ||
Sbjct 16204 CCCTCGGCGCCATCGC-CAAAGACCTGCGCGCCTTTGCATACGTAAGCGCC--TGGAACT 16148
Query 27585 GCAAAACGGTGGAGGAAGCTATTGCCTATCGCGAGAATTTCAGTCAGCGCGAGGGAATGC 27644
||||||| ||| || | | || || |||||||| ||| || ||||| |||
Sbjct 16147 GCAAAACCAAGGAAGAGGTAGTGGCGTACCGCGAGAACTTCGGTGCCCGCGAAATGATGG 16088
Query 27645 TGATCTGGCCTGACTTCATCAACTTTGACACCGTGCTGAAAGCAGAC-GCGACGGCTTAC 27703
|||| ||||| |||||| | |||| ||||| || | || |||| || | ||||
Sbjct 16087 TGATTTGGCCGGACTTCCTGAACTGGGACACTGT-CACCAACAAGACCGCCAGCGCTTCG 16029
Query 27704 GCCTCCGCCCGTGCGCTCGGCCTGCGTGCCAAAATCGACGAGCAGATCGGCTGGCATAAA 27763
||| ||||| || |||||||| || ||||| |||||| | ||| || |||||||||
Sbjct 16028 GCCGTGGCCCGCGCCCTCGGCCTTCGCGCCAAGATCGACCAAGAGACGGGTTGGCATAAA 15969
Query 27764 ACCCTGTCCAATGTGGGTGTGAACGGTGTCACCGGCATTTCCGCTGATGTGTTCTGGGAT 27823
||||||||||| |||| |||| || || ||||| || ||| || ||||||||||||
Sbjct 15968 ACCCTGTCCAACGTGGCCGTGAGTGGCGTGACCGGTATCAGCGCCGACGTGTTCTGGGAT 15909
Query 27824 CTGCAGGACCCGGCAACCGATGCGGGACTGC-TGAACAAAAATGACGTCACCACATTGAT 27882
||||| |||| || ||||| || ||| | | |||| || ||||||||||| ||||
Sbjct 15908 CTGCAAAACCCAGCCACCGACGCCA-ACTACCTCAACAGCAACGACGTCACCACCCTGAT 15850
Query 27883 C--CGCAAAGACGGCTTCCGCTTCTGGGGTTCCCGTTGTCTCAGTGACGATCCGCTGTTT 27940
| ||| || ||| || |||||||||||| ||| |||||| || ||| ||||
Sbjct 15849 CAACGCCAA--CGGTTTTCGCTTCTGGGGTAGCCGCACCTGCAGTGATGACCCGTTGTTC 15792
Query 27941 GCTTTTGAGAACTACACCCGTACGGCGCAGGTGCTGGCTGACACTATGGCGGAGGCGCAC 28000
|| || || ||||||||||| || |||||| | || || ||||| |||| || ||||||
Sbjct 15791 GCCTTCGAAAACTACACCCGCACCGCGCAGATCCTCGCGGACACCATGGGCGAAGCGCAC 15732
Query 28001 ATGTGGGCGGTGGATGGCGTGCTTAATCCGTCGCTGGCCCGCGACATTATTGAAGGACTA 28060
|||||||| || || || | | | || |||| |||||| | | ||||| ||
Sbjct 15731 ATGTGGGCAGTTGACCGCCCTATGCACGCCTCCCTGGTACGCGACCTGGTCGAAGGCGTA 15672
Query 28061 CGCGCCAAGATGCGC-AGTCTGGTCAACCAGGGATACCTGATTGGTGGTGACTGCTGG-- 28117
|||||||||||||| ||| || |||||| |||||||| || || ||||||
Sbjct 15671 AGCGCCAAGATGCGCGAGT-TGAAATCCCAGGGCTACCTGATCGGCGGCAGTTGCTGGAA 15613
Query 28118 -CTGGATGAGTCTGTTAACGATAAAGACGCCCTTAAAGCCGGGAAACTGACCATCGATTA 28176
| ||| || | ||| |||||| |||| || ||||| || || | |||||
Sbjct 15612 CCCGGACGA---CATCAACACCAAAGACACCCTCAAGGCCGGCAAGCTCTGGCTTGATTA 15556
Query 28177 TGACTACACGCCGGTGCCTCCGCTTGAAAACCTGATGCTGCGCCAGCGCATCACCGATCG 28236
|||||||| || ||||| || |||||| |||| | | |||||||| |||||||| ||
Sbjct 15555 CGACTACACCCCCGTGCCGCCACTTGAAGACCTCACCTTCCGCCAGCGAATCACCGACCG 15496
Query 28237 TTACCTGGTCGATTTTGCCA 28256
||||||| |||| || ||||
Sbjct 15495 TTACCTGATCGACTTCGCCA 15476
>seq3088503
Length=21467
Score = 309 bits (342), Expect = 6e-80
Identities = 1019/1564 (65%), Gaps = 54/1564 (3%)
Strand=Plus/Minus
Query 12773 TCACTCATCAAAAAATCTCCACAATGTTGCTGGTATTGG---CGGATTCGCCCTGCAGCG 12829
||| ||||||||||||||||| | | |||||||| ||| | |||| ||||
Sbjct 11544 TCAGTCATCAAAAAATCTCCA---TTCGCCCGGTATTGGAGGCGGTCTGCCCCTCAAGCG 11488
Query 12830 GTTCGTTAAACAGTGCATGCATCGTTGCCCAGGCCAAATCTGCGTGGCTGGCCTCTTCGC 12889
||||||| || ||| || | |||||||||| || || |||| || | |||
Sbjct 11487 GTTCGTTTTGCAATGCGTGAAATAGCGCCCAGGCCAGGTCGGCATGGCCGGTGTTGTCGT 11428
Query 12890 TGCGGCTGGCTTCATAGGTTGGACGGTTG-CCGCTGGCGGTGGTGGCGCGGCGGATAGCC 12948
|||| | || ||||| | || | | |||| |||||| | |||||| |||
Sbjct 11427 TGCGCCCTGCGGTGTAGGT-GTACTGGCGACCGCCTGCGGTGACCGTCTTGCGGATCGCC 11369
Query 12949 ATAAAGGACTGCGCAATGTCGGTGTGCCCAGCGTCAAACTCCAGACGGCGGTGGCTGATA 13008
|| | |||||||| |||||||| ||| ||||| |||||||| |||| || |||
Sbjct 11368 ATCATCGACTGCGCCATGTCGGTCCACCCGGCGTCGAACTCCAGCCGGCCGTTATGGATC 11309
Query 13009 ATGTCGTACGCCTTGAGCACCAGGGCATTTTTGACGTTAGGGTTGTAGACAAACTCCCGC 13068
| ||| || ||||| ||||||||| ||||||| | || ||| || |
Sbjct 11308 ACGTCATAGGCCTTCAGCACCAGGCGTGTTTTGACTTCGGGCGAATAGCTGAAGGTGGTC 11249
Query 13069 ACGGCAGGAAAGAACGCTTTTACGTTCTCATAAACACCGTGCCCGACGCCGGTCGAGTCG 13128
|| || || |||||| || || || ||| || | ||||| ||
Sbjct 11248 ACAGCCGGGAAGAACTGGCGCACCAGCTGCGCCACGCCGCTACCCAGCCCGGTGACATCA 11189
Query 13129 ATGCCGATATAGGTCACGTTGTACTGCTGCGTCAGT--TTTTTGATAGCATCAGCCTGGG 13186
|| |||||||||||||| ||| | | || ||| ||||||||| | |||||||
Sbjct 11188 ATCCCGATATAGGTCACCCAGTAGCGGT-CG-CAGACGTTTTTGATAAATGCCGCCTGGG 11131
Query 13187 CGCGAAAGTCCATCCCGCGCCACTGATGACGCTCCAGAATTCGGAACTTCCCGCCAGGTA 13246
| ||||||||| || || | || || |||||||| | ||||| || ||||| ||||
Sbjct 11130 CCGCAAAGTCCATGCCCCGGAATTGGTGCCGCTCCAGGACGCGGAATTTGCCGCCCGGTA 11071
Query 13247 CAGTTGGCGGTGCCATAACCACGCAGCCTGC-GCTGTCACCGTTCTGCGTACCTTTTGCC 13305
| ||||| || | ||||| ||||| | || |||||| | | || |
Sbjct 11070 CCAGCGGCGGCGCAACCACCAC-CAGCCCGGAGCAATCACCGGTTTCCG---------CT 11021
Query 13306 GGGTCATAACCGATCCACACTTCGCGCCAGCCAAACGGGCGCAGCGCCAGCGCCTGAAAA 13365
||||| || |||||||| || | || || ||||| |||| || | | || |
Sbjct 11020 GGGTCGTAGCCGATCCATACCTGACGGTCACCGAACGGCCGCATGGCGAATGGCTTGTAG 10961
Query 13366 TCG---GTCCAGACTTCCCAGCTGTCCACCATGCACGCCTGCAGCT-CGCTGAGCGGGAA 13421
|| | ||| | |||| ||||| |||||||| ||||||| ||| | ||| ||
Sbjct 10960 TCCTCTGCCCATTCAACCCAACTGTCGACCATGCAGCTCTGCAGCAACGCCAA-CGGAAA 10902
Query 13422 CACGGACGCGAGATCGTCCACGAACTCACACATCAGCAGGTTCTGGTATTCGTCCGGGCT 13481
| | || |||||| || ||||||||||||| |||||| | | | || |||||
Sbjct 10901 GATGCTGGCTCCATCGTCAACAAACTCACACATCAACAGGTTGGCGAACGCCTCAGGGCT 10842
Query 13482 GTACTCCATGCGCAGCTGGTCGAGGTCGAACAGGTTACAGCCGCCGCGCACCGCATCCTC 13541
||||||| |||| || || | ||||||||| | |||||||||| || | || |||
Sbjct 10841 GTACTCCCGACGCAACTCCTCAATGTCGAACAGATCACAGCCGCCGTGCTCTGCGTCCAG 10782
Query 13542 CACGGTGACGATCTGGCGGTACTGCCCGTCAGGGCAGAGCAGGCCGCGCGCAAGGTTGCT 13601
| |||||||||||| || || || ||| ||||| | | || | || |
Sbjct 10781 GATGGTGACGATCTGCCGCCACAACCGGTCCTCGCAGAACCGCCCCTGTTGGAGCGCCCC 10722
Query 13602 GTGGGTCAGGTTAATATCCACCTT-GTCCGCTTTGGCACGG-----CCCCGGTTAAACAG 13655
||||| || || ||||| || | | | | | | ||| ||| || |
Sbjct 10721 GTGGG------AAACGTCGACCTTGGTGTGTTGCGCCGCTGGCTTACCCTTGTTGAAGCG 10668
Query 13656 CGCACCGGACCAGAACGGATAAGCACTGTGGGTCAGGCTGGAGGGCGTGGAAAAATAGGT 13715
| | |||| |||||| | || || |||| || |||||| ||||| || || |||||
Sbjct 10667 CTCGCCGGTCCAGAAGGTGTAGGCCTCATGGGCCATGCTGGACGGCGTCGAGAAGTAGGT 10608
Query 13716 TTGTCGCCATTTTTTGTGAATGGCCATACCGGAAGCCACTTTGCGCAGTTCCTGGAATTT 13775
|| ||||| || ||||| |||||||| || ||||| || ||| |||||||| || ||
Sbjct 10607 TTTGCGCCACTTCTTGTGCATGGCCATGCCCGAAGCGACCTTGTTCAGTTCCTCAAACTT 10548
Query 13776 TGGTATCCAGAAATATTCATCCAGGTACAGATTACCGTGATAGCTCTGCGCCGTGCGGGC 13835
||||||| |||| || | ||| | ||| ||||| |||| ||| || || || ||
Sbjct 10547 GAACGTCCAGAAGAATTCGTCGAAGTAGAAATTGCCGTGGTAGCCCTGGGCGGTACGCGC 10488
Query 13836 GTTGGTGCCGAGAAAGTACAAAGCGGCCCCATTGGGTAACACCATGGGATCGCCTTTCAG 13895
||||| ||||| || ||| |||| || ||||| || || |||||||| || ||||
Sbjct 10487 ATTGGTACCGAGGAAAAACAGCTCGGCGCCGTTGGGCAATACGATGGGATCCCCCGTCAG 10428
Query 13896 CTCAACATC---CACCTCTTTTGCAAAGTCGATGATGTACTGCTTAAAGACGTGCGCCTG 13952
||| ||| | ||||| ||||| | ||||||| ||| | | || ||
Sbjct 10427 CTCGACACCGATAACCTCACGGGCAAATGCCTGGATGTACCCGCGAAACAGATAGGCTTG 10368
Query 13953 TGCCTTACTGGCAGAAAGGAAAATCTGGTTGCGTCCGGTCAGCAGGGCGTCAATCAATGC 14012
|| || || ||||| ||||| ||||| ||||| ||| || |||| || ||
Sbjct 10367 GTTTTTCGATGCGGACAGGAAGATCTGATTGCGCCCGGTTTCCAGCGCATCAAGAAACGC 10308
Query 14013 TTCACGGGCAAAATAAAACGTGGCGCCAATCTGGCGCGACTTGAGCAGGTTGCGGATGCG 14072
|| |||||||| ||| | || ||||| ||||| || ||||| | | ||| | ||
Sbjct 10307 CTCGCGGGCAAAGTAATAGGTCGCGCCGATCTGCCGGCTTTTGAGGATGACGCGAGTCCG 10248
Query 14073 GTTTGTTTTCCCGGCTTCAAACCAGTGACGCTGATAGTCGAACATAGAGGCGTGG---AA 14129
||| || || || |||||| ||| |||||||| | || ||| | ||
Sbjct 10247 --TTG-ATTGCCAGCCCGGTACCAGTCTTTCTGGTAGTCGAA---ACAGCCGTCGATAAA 10194
Query 14130 GACTTCTTCCAGCTTTTCGATCTGTTCATCAGTGAAAACATTCTTTTCCGGCTGACGGCG 14189
|||| || | |||||||| || || ||| | | || ||| | ||
Sbjct 10193 CGCTTCACGCAACAGCTCGATCTGCTCTTCGCTGATATCGTTTTTTGGGGTCTTTTTCTT 10134
Query 14190 TGGGCCTTTGTTGCGGTTGGCGACGTTAGGGTTTAAGTCGGCTTCGTTGCCACCATTGTT 14249
|| || | |||||| || || | ||||||||| | |||| |||| | || || |
Sbjct 10133 CGGACCCTCGTTGCGTTTAGCCAGGTTAGGGTTGAGCTCGGTTTCGGTACCGCCGCCCTG 10074
Query 14250 AAACTTGCCG-ATCCGCGCGTGGCGCTCCGACTGGCGCGCCAGCAGGTCAATTTCTTTGA 14308
||| || | || | || ||||| ||| | ||||| |||||| |||||||| ||||
Sbjct 10073 AAA-GCGCTGAATTCTGGCCTGGCGTTCCAATTGGCGGTGCAGCAGATCAATTTCCTTGA 10015
Query 14309 AATC 14312
| ||
Sbjct 10014 AGTC 10011
Score = 242 bits (268), Expect = 8e-60
Identities = 622/927 (67%), Gaps = 60/927 (6%)
Strand=Plus/Minus
Query 15653 CAGACGCTGGAAGACCAGATCCAGCAGTCCGCCGCTTTCCTGA-CGCTGATTAACATC-A 15710
|| || |||||| ||| ||| ||| ||||| ||| ||| ||| || |||||| |
Sbjct 8642 CAAACCCTGGAAAACCGGATGCAGGAGTCCAGTCAGTTCTTGAGCGCC-ATCAACATCTA 8584
Query 15711 CGCCGGTCACTGAACAGTCAGGACAGTTGCTGGGGCTGGGCGTTGGCAGCACCATTGCCG 15770
|| || || | || ||| || || | || ||||| | ||| | | | ||||
Sbjct 8583 CGGCG-TCGCCGAGCAGATGGGCGAGAAAATTGGCATGGGCATCGGCGGGCCGAACGCCG 8525
Query 15771 GAACCACCGATACCACCACCAAAGAGCGCGAGCCTACCGA--TCCG-ACGCTGATGGAAG 15827
| ||||| ||||| | |||||||||||||| | | ||| || | || || || |
Sbjct 8524 GCACCACTGATACAAATACCAAAGAGCGCGAAACCAGCGACATCAGCACACTC---GATG 8468
Query 15828 AC-GTGGAATACAAATGCGAACAGACCAACTTTGATACGGTGCTGACCTACGCAAAACTG 15886
|| |||| ||| ||| ||||||||||| ||||| || ||| || ||
Sbjct 8467 ACCGTGGC-TACTTCTGCTCGCAGACCAACTTCGATACCCACCTCCGTTACAGCAAGTTG 8409
Query 15887 GACCTGTGGGCCAAGTTCCAGGACTTCCAGGTGCGTATCCGCAACGCCATCGTCAAGCGT 15946
|| |||||||||||||| |||||||||| ||||| || |||||||| | || ||
Sbjct 8408 GATGCGTGGGCCAAGTTCCCCGACTTCCAGGCCCGTATTCGTGACGCCATCCTGAAACGC 8349
Query 15947 CAGGCGCTGGACCGCATCATGATCGGCTTTAACGGCGTGAAGCGCGCCAAAACCTCAAAT 16006
|||||||||||||||||| ||||||| | |||||||| | |||||| || || ||
Sbjct 8348 CAGGCGCTGGACCGCATCCTGATCGGTTGGAACGGCGTCAGTCGCGCCGCGACGTCCAAC 8289
Query 16007 CGTGCTGAAAACCCGCTGCTGCAGGACGTCAATAAAGGCTGGTTACAGAAAATCCGCG-- 16064
| || || || || | ||||||||||| | || ||| | ||||| || ||||
Sbjct 8288 CCAGCCACCAATCCACTTCGCCAGGACGTCAACATTGGTTGGCTGCAGAAGATGCGCGCC 8229
Query 16065 -AAGACGCG--CCGGATCATGTTATGGGCAGCACCACAAAAGACGGTGCAACGACTGCAG 16121
|| |||| ||| ||||| | || ||| ||| ||| ||
Sbjct 8228 GAAAACGCCGCCCGCGTCATG--AAGG------------AAGT-GGT----CGA----AG 8192
Query 16122 GCGCGGTCAAAGTGGGCAAGGGCGGCG------ACTATGCCAACCTGGACGCCGTGGTGA 16175
|| | | |||| | || || | || ||| ||||||| |||||| ||||
Sbjct 8191 GCTCCGGCAAAATCACCATCGGTGCCGGTAAAGACTTCACCAACCTCGACGCCCTGGTAT 8132
Query 16176 T--GGATGCCGTCAACGAGCTGATCGACGCGGTT-TATCAGGATGATGACGATCTGGTTG 16232
| | ||| || | ||| | || | ||| || || ||||| || |||||||| |
Sbjct 8131 TCAGCATG--GTGGAAGAGTTCATTG-CGCCGTGGTACCAGGAAGACCCTGATCTGGTGG 8075
Query 16233 TTGTCTGCGGACGTGAACTGCTGTCTGACAAGTATTTCCCGCTGGTCAACAAAGAGCAGG 16292
| ||||||| || |||||||| | ||||||||||||||| | |||||||||| | |
Sbjct 8074 TGATCTGCGGTCGCCAACTGCTGGCCGACAAGTATTTCCCGATCATCAACAAAGACAACG 8015
Query 16293 ACAACAGCGA--GAAAA--TTGCCGCCGATCTGATCATCAGCCAGAAACGTATGGGCGGC 16348
| ||| |||| | ||||||||| | ||| ||| || || || |||||
Sbjct 8014 ----CGCCGACTGAAATGCTGGCCGCCGATATCGTCACCAGTCAAAAGCGCTTGGGCAAT 7959
Query 16349 CTGCAGGCCGTGCGTGCGCCTTATTTCCCGGCAAATGCCCTGCTGATCACCCGTCTGGAT 16408
||| |||||||| | |||||| |||||| | | ||||| ||||| |||||
Sbjct 7958 TTGCCAGCCGTGCGCGTGCCTTACTTCCCGCCGCGCGGGTTGCTGGTCACCAAGCTGGAA 7899
Query 16409 AACCTGTCCATCTACTGGCAGGAAGATACCCGCCGCCGTTCTGTTATCGACAACCCGAAA 16468
|||||||| |||||||||||||||| | ||||||||| | || ||||||| | ||
Sbjct 7898 AACCTGTCGATCTACTGGCAGGAAGGCAGCCGCCGCCGCACCGTCGTCGACAATGCCAAG 7839
Query 16469 CGTGACCGGATTGAAAACTTTGAGTCCGTCAACGAGGCGTATGTGGTCGAGGACTACCGC 16528
|||||||| || ||||||| ||||| ||||| || || || || | || |||
Sbjct 7838 CGTGACCGCATCGAAAACTACGAGTCGGTCAATGACGCATACGTCATTGAAGACCTGGAA 7779
Query 16529 TGCGCGGCGCTGGTAGAAAACATCGAA 16555
|| || |||| | ||||||||||||
Sbjct 7778 TGTGCCTCGCTCGCTGAAAACATCGAA 7752
Score = 149 bits (164), Expect = 1e-31
Identities = 295/431 (68%), Gaps = 12/431 (3%)
Strand=Plus/Minus
Query 11873 CCAAACCCCCCAACATTACTCGGCATAATCCCCATCATCTGCGGCGGAACGCGGTGTGCT 11932
||||| ||||| | || ||||| ||| ||||||| |||||| |||| || |||
Sbjct 12423 CCAAAGCCCCCCGCGTTCTGCGGCACAATGCCCATCAGCTGCGGTGGAATACGCAA-GCT 12365
Query 11933 GCC-ATCATGTCATCGCGGCTCACGTTCTTGAT---GTTCAAAAACTCATCCTTAGCTGC 11988
| | | || || || ||| | ||| ||||| ||| || |||||||| || ||
Sbjct 12364 GGCTAGCACATCGTCACGGGTTTGGTTTTTGATCGAGTTGAAT---TCATCCTTGGCCGC 12308
Query 11989 AACCTCCGAAAGTGGAATGATTTGGATACCGTCCTTTTTACCGTTGGGCGAGTACATAAA 12048
||||| | || || | || || |||||||| || ||| ||||||| |||| |||
Sbjct 12307 CACCTCACTGACCGGGATCAGCTGTATCCCGTCCTTCTTGCCGGTGGGCGAATACACAAA 12248
Query 12049 CAGGTTGCGGAAGTTGCCCGGCCCTTTGGCGCTTTTCATTGCCTGGCGGATGTTGTTCAC 12108
|| |||||| || ||||| ||||| |||| | || | |||| ||| | || |
Sbjct 12247 CAAGTTGCGAAAATTGCCTGGCCCCTTGGAGTCCTTGAGAGCCTTGCGCAAAGCGTCGAT 12188
Query 12109 GTCCTCCTGGTTCTGCGCGGCGTCAGTCATGTACATGATGAAGCCTGCGTGGCTACCGTT 12168
|| | |||| ||||| || |||||||| | |||||||| ||||| || || ||
Sbjct 12187 ATCGGTTTCAGTCTGTGCGGCATCGGTCATGTAGAGAATGAAGCCGGCGTGACTGCCATT 12128
Query 12169 AATGTAGTACTTCCGGCGGAACAGTGTTGCGGACTCATTCAGCAGGGCGGAAGGGATAGC 12228
||||||||| |||||||||| || || || || || |||| || || | | ||
Sbjct 12127 CTCGTAGTACTTGCGGCGGAACAACGTGGCCGATTCGTTGAGCAACGCCGACTGCAAGGC 12068
Query 12229 TGACAGAT--ATTCCGGCAGACCGTAAATCTCCTGGTTTAAATCCGGCTCCATCAGGTGA 12286
|| || | ||||||| || ||||||||||||| ||||||| || ||| |||
Sbjct 12067 --ACTAATCCACTCCGGCAAGCCATAAATCTCCTGGTGCAAATCCGCTTCTCGCAGATGA 12010
Query 12287 AAGATGCTGCC 12297
|| || || ||
Sbjct 12009 AAAATACTTCC 11999
Score = 109 bits (120), Expect = 1e-19
Identities = 137/185 (74%), Gaps = 6/185 (3%)
Strand=Plus/Minus
Query 18982 ATCGAGGAACTGAAACGTGAAAACGAGGATTTGCGCCGCTGGGCTGACGCTCCTTTGCCT 19041
|| ||||||||||||||||||||||| || ||||| |||||||| |||||||||
Sbjct 4286 ATAGAGGAACTGAAACGTGAAAACGATGACCTGCGCAAATGGGCTGATCAGCCTTTGCCT 4227
Query 19042 GCTGACATTATCCGGCTGCGGGAGCGTCCGGCCCTCGCCGGAGGTGCAGCTTACCGTGAG 19101
| | | ||||||||| || || || |||||| | || | |||||||||||||
Sbjct 4226 GACGCTGCTCGCCGGCTGCGCGATCGCCCCGCCCTCACTGGCGCCTCAGCTTACCGTGAC 4167
Query 19102 TGGCTGTCCCAGAGTGACGCAGTGCCGCTTGGACAGG---TCAGCGCCGCGCAGTAACGG 19158
||||||||| ||| || ||| | || || || |||| ||||||||||||||
Sbjct 4166 TGGCTGTCCGGCCGTGGTGCCGTGTCAGTT--ACCGGCGACCAGC-CCGCGCAGTAACGG 4110
Query 19159 CGATC 19163
|||||
Sbjct 4109 CGATC 4105
>seq3084702
Length=3045
Score = 114 bits (126), Expect = 3e-21
Identities = 207/296 (70%), Gaps = 10/296 (3%)
Strand=Plus/Minus
Query 22985 ACCTGCCCGATCAGATTCCTGCCTTATCTGGCCTGGGCGTTTTCTGTTGACCGCTGGGAT 23044
||||||||| | || ||||| ||||||||||||| | || || || |||||||||
Sbjct 2889 ACCTGCCCGGTGCATTTGCTGCCGCATCTGGCCTGGGCTTGGTCGGTGGATCGCTGGGAT 2830
Query 23045 GAGAGCTGGACAGAAAGCG-TCAAGCGCCGCGTTGTGCAGGACGCTTTTTATATCCATCA 23103
| | ||||||| | ||| |||||| || | ||| | ||| ||| ||||||
Sbjct 2829 TACCGATGGACAG-AGGCGACCAAGCGTGCCGCCATCAAGGCCTCTTATTACATCCATGC 2771
Query 23104 GCACAAGGGGACAACCCGCGCCGTGCGGCGCGTGGTGGAGCCGTTCGGCTTCCTGATCCG 23163
|||||||| || | | ||||| |||| || ||||| ||||| | |||| ||||||
Sbjct 2770 CCACAAGGGAACTATCGGCGCCTTGCGTCGTGTGGTTGAGCCTCTGGGCTACCTGATTGA 2711
Query 23164 CATCATTGAGTGGT----GGC--AGACCGGCGAAACGCC-GGGAACGTTCCGTCTGGATA 23216
||||| ||||||| || | ||| | ||||| |||| || ||| || |
Sbjct 2710 AATCATCGAGTGGTTTAACGCTGTGCCCGAGGGCACGCCAGGGACATTTGCGT-TGAAGG 2652
Query 23217 TTGGCGTACAGGATCATGGTATCACCGAAGACACCTATCTGGAGCTTGAGCGCCTG 23272
||||||| ||| |||||||||||||| | |||| |||||| ||||| |||
Sbjct 2651 TTGGCGTGAGTGATTCCGGTATCACCGAAGAGATGTATCAGGAGCTGGAGCGGCTG 2596
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 105053172077978
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