Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_019518.1
Length=44485
Score E
Sequences producing significant alignments: (Bits) Value
seq3087968 176 1e-39
seq108461 120 8e-23
>seq3087968
Length=6546
Score = 176 bits (194), Expect = 1e-39
Identities = 160/202 (79%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 10464 GGTTGTGTTATTGGACCCGTCCGCACAGTCGCTTGGCGCGTCCTCGATGCCCAATATTTC 10523
|||||||| ||||||| | ||| |||| ||||| ||||| || ||||||||||||
Sbjct 1 GGTTGTGTGTATGGACCCAAAAGAACAATCGCGTGGCGGGTCCTGGACGCCCAATATTTC 60
Query 10524 GGACTGGCCCAACGACGCAAGCGTGTGTTTGTTGTCGCAAGTGCTCGAAAAGGATTTGAT 10583
|| ||||||||||||||| |||||||| |||||||||||||||||| | || || |||
Sbjct 61 GGCCTGGCCCAACGACGCCGTCGTGTGTTCGTTGTCGCAAGTGCTCGAGACGGGTTCGAT 120
Query 10584 CCCGCAGAAGTATTATTTGAGCGCGAAGGCGTGCGAAGGGATTCTCCGCCGAGCCGAGAA 10643
|| | || ||| | ||||||||||||||| |||| ||||| || ||||| ||||||
Sbjct 121 CCAACCGAGGTACTTTTTGAGCGCGAAGGCTTGCGCCGGGATACTGCGCCGCGCCGAGGC 180
Query 10644 GCGTTGCAAGAAGCTGCCGGAA 10665
| | |||||| | | ||||||
Sbjct 181 GAGGGGCAAGACGTTACCGGAA 202
>seq108461
Length=6150
Score = 120 bits (132), Expect = 8e-23
Identities = 95/114 (83%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 10528 TGGCCCAACGACGCAAGCGTGTGTTTGTTGTCGCAAGTGCTCGAAAAGGATTTGATCCCG 10587
|||||||||||||| |||||||| |||||||||||||||||| | || || ||||||
Sbjct 185 TGGCCCAACGACGCCGTCGTGTGTTCGTTGTCGCAAGTGCTCGAGACGGGTTCGATCCCA 244
Query 10588 CAGAAGTATTATTTGAGCGCGAAGGCGTGCGAAGGGATTCTCCGCCGAGCCGAG 10641
||| ||| | |||||||| ||||||||||| ||||| || ||||| ||||||
Sbjct 245 CAGCGGTACTTTTTGAGCGAGAAGGCGTGCGCCGGGATACTGCGCCGCGCCGAG 298
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 137013948160154
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |